Pregenerated sensors for VMN2R52 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091930Ensembl transcript IDs: ENSMUST00000164918.3, ENSMUST00000232927.2
Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | ACCCACTTCCCACCCTTGGAGGCTGCACACTCCAATTCATTCTCCTaGCTCTCTGGACTTCTCTCAAGCACCCCTCTCCACAAACAACTG | + |
Preference number: 1 (lower is better) Translates to: THFPPLEAAHSNSFS*LSGLLSSTPLHKQL Trigger: CAGTTGTTTGTGGAGAGGGGTGCTTGAGAGAAGTCCAGAGAGCCAGGAGAATGAATTGGAGTGTGCAGCCTCCAAGGGTGGGAAGTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR GCA 90 bp | TACAACTCCTCATCCCATTCTTCCTCCCACTTGCCTCTCATAGAGTaGTTACTAACTTCCCTCTCTGCCCCTACACCAGGCATTTCACTT | + |
Preference number: 1 (lower is better) Translates to: YNSSSHSSSHLPLIE*LLTSLSAPTPGISL Trigger: AAGTGAAATGCCTGGTGTAGGGGCAGAGAGGGAAGTTAGTAAGCACTCTATGAGAGGCAAGTGGGAGGAAGAATGGGATGAGGAGTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR TCA 90 bp | TCTGGAATCTCAGGATTCTGGGGTGTTAGGTGTGCCTTCTATCAATaGGGTCAGACAAGGCAGTCTATGCTGCATATGTGTCAAGGACCT | + |
Preference number: 1 (lower is better) Translates to: SGISGFWGVRCAFYQ*GQTRQSMLHMCQGP Trigger: AGGTCCTTGACACATATGCAGCATAGACTGCCTTGTCTGACCTCATTGATAGAAGGCACACCTAACACCCCAGAATCCTGAGATTCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR GCA 90 bp | TGCTGGAGACAATATAAGGACATTGGAAGAAGGGAGTCTAGCTCTTaGTCCTTCACCTGCTTGCTGTGTGAGACTGAGTACCTGCTAGAT | + |
Preference number: 1 (lower is better) Translates to: CWRQYKDIGRRESSS*SFTCLLCETEYLLD Trigger: ATCTAGCAGGTACTCAGTCTCACACAGCAAGCAGGTGAAGGAGCAAGAGCTAGACTCCCTTCTTCCAATGTCCTTATATTGTCTCCAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR TCA 90 bp | ACATACTATGTGTGTCTTTTTGGGAATTGGGTTACAAGAGCAAACTaGCCAGAGCGAGCAGAGGTCCTGAATTCAATTCCCAGCAGCCAC | + |
Preference number: 1 (lower is better) Translates to: TYYVCLFGNWVTRAN*PERAEVLNSIPSSH Trigger: GTGGCTGCTGGGAATTGAATTCAGGACCTCTGCTCGCTCTGGTCAGTTTGCTCTTGTAACCCAATTCCCAAAAAGACACACATAGTATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR GCA 90 bp | TATAAGGACATTGGAAGAAGGGAGTCTAGCTCTTGCTCCTTCACCTaGTTGCTGTGTGAGACTGAGTACCTGCTAGATCCTTGGAATTCT | + |
Preference number: 1 (lower is better) Translates to: YKDIGRRESSSCSFT*LLCETEYLLDPWNS Trigger: AGAATTCCAAGGATCTAGCAGGTACTCAGTCTCACACAGCAAGCAGGTGAAGGAGCAAGAGCTAGACTCCCTTCTTCCAATGTCCTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR CCA 90 bp | TCCATTAAATATCTGCCCCCATGCCTTAGGAAGCACCATGACAGATaGAGACAAAGGAATGTAACAGCTGAGAGAATGGAGGACACCAAG | + |
Preference number: 1 (lower is better) Translates to: SIKYLPPCLRKHHDR*RQRNVTAERMEDTK Trigger: CTTGGTGTCCTCCATTCTCTCAGCTGTTACATTCCTTTGTCTCCATCTGTCATGGTGCTTCCTAAGGCATGGGGGCAGATATTTAATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR TCA 90 bp | TCTGGAGGCTTGGAGATCCTTATCTGGATCTTGGTTTGGAGATCATaGGCCAAAGTGGCTATGGATTCCAGAAGATTGAATCTCCGAGTT | + |
Preference number: 1 (lower is better) Translates to: SGGLEILIWILVWRS*AKVAMDSRRLNLRV Trigger: AACTCGGAGATTCAATCTTCTGGAATCCATAGCCACTTTGGCTCATGATCTCCAAACCAAGATCCAGATAAGGATCTCCAAGCCTCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR GCA 90 bp | TGTGTATGTATTTTTGCCTACCTGTGTGTCAGTGTAGCACATGAATaGAATGTCTATGGAGTCCTGAGTAGGGCAGAAGATACACTGGAA | + |
Preference number: 1 (lower is better) Translates to: CVCIFAYLCVSVAHE*NVYGVLSRAEDTLE Trigger: TTCCAGTGTATCTTCTGCCCTACTCAGGACTCCATAGACATTGCATTCATGTGCTACACTGACACACAGGTAGGCAAAAATACATACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR CCA 90 bp | GGCAAATATCTACTTATCAGTGAGTACATACTATGTGTGTCTTTTTaGGAATTGGGTTACAAGAGCAAACTGACCAGAGCGAGCAGAGGT | + |
Preference number: 1 (lower is better) Translates to: GKYLLISEYILCVSF*ELGYKSKLTRASRG Trigger: ACCTCTGCTCGCTCTGGTCAGTTTGCTCTTGTAACCCAATTCCCAAAAAGACACACATAGTATGTACTCACTGATAAGTAGATATTTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR TCA 90 bp | GAGCAGAAAAAGAACATTTCCATTTTAGACCATTGTCTGATAGCTTaGAGAGCAGCTGAAGAGAACAGGCAATATCTCTCATGTGTGTGC | + |
Preference number: 1 (lower is better) Translates to: EQKKNISILDHCLIA*RAAEENRQYLSCVC Trigger: GCACACACATGAGAGATATTGCCTGTTCTCTTCAGCTGCTCTTCAAGCTATCAGACAATGGTCTAAAATGGAAATGTTCTTTTTCTGCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR TCA 90 bp | CTTTCTGTGTCCTGTGGTTATTTTGTTTCCCCTTCTAAGTGGGATTaGAACATTCTCTCTTATTCCTTCCTAAAGGTTGAACTTCTTAAG | + |
Preference number: 1 (lower is better) Translates to: LSVSCGYFVSPSKWD*NILSYSFLKVELLK Trigger: CTTAAGAAGTTCAACCTTTAGGAAGGAATAAGAGAGAATGTTTCAATCCCACTTAGAAGGGGAAACAAAATAACCACAGGACACAGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR TCA 90 bp | GTATCTTGGGTATTCTGTACTTTTCGGCAAATATCTACTTATCAGTaGGTACATACTATGTGTGTCTTTTTGGGAATTGGGTTACAAGAG | + |
Preference number: 1 (lower is better) Translates to: VSWVFCTFRQISTYQ*VHTMCVFLGIGLQE Trigger: CTCTTGTAACCCAATTCCCAAAAAGACACACATAGTATGTACTCACTGATAAGTAGATATTTGCCGAAAAGTACAGAATACCCAAGATAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR TCA 90 bp | CCTTTGAGATTATCTTCCTCCAGAAACTCAATCACAACTGCAAACTaGGTGCAGTCTCTGAGAAAAATTAGTTTTATGCAAATATCACTA | + |
Preference number: 1 (lower is better) Translates to: PLRLSSSRNSITTAN*VQSLRKISFMQISL Trigger: TAGTGATATTTGCATAAAACTAATTTTTCTCAGAGACTGCACTCAGTTTGCAGTTGTGATTGAGTTTCTGGAGGAAGATAATCTCAAAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR GCA 90 bp | CCAGAGCGAGCAGAGGTCCTGAATTCAATTCCCAGCAGCCACGTAATGGCTCACAGCCTCAGGCTCCCATaGCACCCTTTGAGATTATCT | + |
Preference number: 2 (lower is better) Translates to: PERAEVLNSIPSSHVMAHSLRLP*HPLRLS Trigger: AGATAATCTCAAAGGGTGGCATGGGAGCCTGAGGCT...GTGAGCCATTACGTGGCTGCTGGGAATTGAATTCAGGACCTCTGCTCGCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR CAA 90 bp | TCTGCATCCCCCTCCTACAACTCCTCATCCCATTCTTCCTCCCACTaGCCTCTCATAGAGTGCTTACTAACTTCCCTCTCTGCCCCTACA | + |
Preference number: 2 (lower is better) Translates to: SASPSYNSSSHSSSH*PLIECLLTSLSAPT Trigger: TGTAGGGGCAGAGAGGGAAGTTAGTAAGCACTCTATGAGAGGCAAGTGGGAGGAAGAATGGGATGAGGAGTTGTAGGAGGGGGATGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR GCA 90 bp | TGTATTACTTCCTTAAGGGTCCACCCACTTCCCACCCTTGGAGGCTGCACACTCAGCCTCAGGCTCCCATaGCACCCTTTGAGATTATCT | + |
Preference number: 2 (lower is better) Translates to: CITSLRVHPLPTLGGCTLSLRLP*HPLRLS Trigger: AGATAATCTCAAAGGGTGGCATGGGAGCCTGAGGCT...GAGTGTGCAGCCTCCAAGGGTGGGAAGTGGGTGGACCCTTAAGGAAGTAATACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR CCA 90 bp | CCAGAGCGAGCAGAGGTCCTGAATTCAATTCCCAGCAGCCACGTAATGGCTCACCTTCTGATCATTCTATaGGGCACCATTCTCTTCAGC | + |
Preference number: 2 (lower is better) Translates to: PERAEVLNSIPSSHVMAHLLIIL*GTILFS Trigger: GCTGAAGAGAATGGTGCCCCATAGAATGATCAGAAG...GTGAGCCATTACGTGGCTGCTGGGAATTGAATTCAGGACCTCTGCTCGCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR TCA 90 bp | TCCAGCCATTGGACACCATTCTGCATCCCCCTCCTACAACTCCTCATCCCATTCAGCTTGAAGAGCAGCTaGAGAGAACAGGCAATATCT | + |
Preference number: 2 (lower is better) Translates to: SSHWTPFCIPLLQLLIPFSLKSS*REQAIS Trigger: AGATATTGCCTGTTCTCTTCAGCTGCTCTTCAAGCT...GAATGGGATGAGGAGTTGTAGGAGGGGGATGCAGAATGGTGTCCAATGGCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR CCA 90 bp | TCCAGCCATTGGACACCATTCTGCATCCCCCTCCTACAACTCCTCATCCCATTCCTTCTGATCATTCTATaGGGCACCATTCTCTTCAGC | + |
Preference number: 2 (lower is better) Translates to: SSHWTPFCIPLLQLLIPFLLIIL*GTILFS Trigger: GCTGAAGAGAATGGTGCCCCATAGAATGATCAGAAG...GAATGGGATGAGGAGTTGTAGGAGGGGGATGCAGAATGGTGTCCAATGGCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR CCA 90 bp | TCCAGCCATTGGACACCATTCTGCATCCCCCTCCTACAACTCCTCATCCCATTCGTTTCTGAGAGGTTCTaGTTGTCCATGTTAGTTGAG | + |
Preference number: 2 (lower is better) Translates to: SSHWTPFCIPLLQLLIPFVSERF*LSMLVE Trigger: CTCAACTAACATGGACAACCAGAACCTCTCAGAAAC...GAATGGGATGAGGAGTTGTAGGAGGGGGATGCAGAATGGTGTCCAATGGCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR TCA 90 bp | TCCAGCCATTGGACACCATTCTGCATCCCCCTCCTACAACTCCTCATCCCATTCTGTGTGTGCTCCTATTaGAAATCAGAAAATGTGCTC | + |
Preference number: 2 (lower is better) Translates to: SSHWTPFCIPLLQLLIPFCVCSY*KSENVL Trigger: GAGCACATTTTCTGATTTTCAATAGGAGCACACACA...GAATGGGATGAGGAGTTGTAGGAGGGGGATGCAGAATGGTGTCCAATGGCTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR TCA 90 bp | TGTATTACTTCCTTAAGGGTCCACCCACTTCCCACCCTTGGAGGCTGCACACTCTGTGTGTGCTCCTATTaGAAATCAGAAAATGTGCTC | + |
Preference number: 2 (lower is better) Translates to: CITSLRVHPLPTLGGCTLCVCSY*KSENVL Trigger: GAGCACATTTTCTGATTTTCAATAGGAGCACACACA...GAGTGTGCAGCCTCCAAGGGTGGGAAGTGGGTGGACCCTTAAGGAAGTAATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR CCA 90 bp | TCCAGCCATTGGACACCATTCTGCATCCCCCTCCTACAACTCCTCATCCCATTCCTATGTGTGTCTTTTTaGGAATTGGGTTACAAGAGC | + |
Preference number: 2 (lower is better) Translates to: SSHWTPFCIPLLQLLIPFLCVSF*ELGYKS Trigger: GCTCTTGTAACCCAATTCCCAAAAAGACACACATAG...GAATGGGATGAGGAGTTGTAGGAGGGGGATGCAGAATGGTGTCCAATGGCTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR CAA 90 bp | TCTTTAATCTGGGCTACACCTTCTGCTGGAGACAATATAAGGACATaGGAAGAAGGGAGTCTAGCTCTTGCTCCTTCACCTGCTTGCTGT | + |
Preference number: 2 (lower is better) Translates to: SLIWATPSAGDNIRT*EEGSLALAPSPACC Trigger: ACAGCAAGCAGGTGAAGGAGCAAGAGCTAGACTCCCTTCTTCCAATGTCCTTATATTGTCTCCAGCAGAAGGTGTAGCCCAGATTAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR TCA 90 bp | TCCAGCCATTGGACACCATTCTGCATCCCCCTCCTACAACTCCTCATCCCATTCGCTCCACTTACATGGTaGCCAGGAAATATAATATAT | + |
Preference number: 2 (lower is better) Translates to: SSHWTPFCIPLLQLLIPFAPLTW*PGNIIY Trigger: ATATATTATATTTCCTGGTCACCATGTAAGTGGAGC...GAATGGGATGAGGAGTTGTAGGAGGGGGATGCAGAATGGTGTCCAATGGCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR GCA 90 bp | ATTTGGTGTCCTAGTGCAGAAAATAGATGTGGACACAGACACTGTCTCTATTCCAGGGAGTCTAGCTCTTaGTCCTTCACCTGCTTGCTG | + |
Preference number: 2 (lower is better) Translates to: IWCPSAENRCGHRHCLYSRESSS*SFTCLL Trigger: CAGCAAGCAGGTGAAGGAGCAAGAGCTAGACTCCCT...GGAATAGAGACAGTGTCTGTGTCCACATCTATTTTCTGCACTAGGACACCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR GCA 90 bp | TTTCTTTTCTCCCCGGGCTGCTCCACTTACATGGTGACCAGGAAATATAATATAAGGGAGTCTAGCTCTTaGTCCTTCACCTGCTTGCTG | + |
Preference number: 2 (lower is better) Translates to: FLFSPGCSTYMVTRKYNIRESSS*SFTCLL Trigger: CAGCAAGCAGGTGAAGGAGCAAGAGCTAGACTCCCT...TATATTATATTTCCTGGTCACCATGTAAGTGGAGCAGCCCGGGGAGAAAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR CCA 90 bp | TTTCTTTTCTCCCCGGGCTGCTCCACTTACATGGTGACCAGGAAATATAATATAGGAATCTCAGGATTCTaGGGTGTTAGGTGTGCCTTC | + |
Preference number: 2 (lower is better) Translates to: FLFSPGCSTYMVTRKYNIGISGF*GVRCAF Trigger: GAAGGCACACCTAACACCCCAGAATCCTGAGATTCC...TATATTATATTTCCTGGTCACCATGTAAGTGGAGCAGCCCGGGGAGAAAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR CAA 90 bp | CTGGTTGTCAACTTGACTATATTTGGAATGAACTACAATCCAGAATaGGAAGGCTCACCAGTGACCCTTATCTGGAGGCTTGGAGATCCT | + |
Preference number: 2 (lower is better) Translates to: LVVNLTIFGMNYNPE*EGSPVTLIWRLGDP Trigger: AGGATCTCCAAGCCTCCAGATAAGGGTCACTGGTGAGCCTTCCAATTCTGGATTGTAGTTCATTCCAAATATAGTCAAGTTGACAACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR TCA 90 bp | ACTAATACACCCCCTGACTCTTCTGCATTTCTTACCTCTTCCCCCATCTCCAAGTCATTTTTCTTCCATTaGGATTTGCCCCTGGTAACT | + |
Preference number: 2 (lower is better) Translates to: TNTPPDSSAFLTSSPISKSFFFH*DLPLVT Trigger: AGTTACCAGGGGCAAATCTCAATGGAAGAAAAATGA...CTTGGAGATGGGGGAAGAGGTAAGAAATGCAGAAGAGTCAGGGGGTGTATTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR TCA 90 bp | ATTTGGTGTCCTAGTGCAGAAAATAGATGTGGACACAGACACTGTCTCTATTCCAGCTTGAAGAGCAGCTaGAGAGAACAGGCAATATCT | + |
Preference number: 2 (lower is better) Translates to: IWCPSAENRCGHRHCLYSSLKSS*REQAIS Trigger: AGATATTGCCTGTTCTCTTCAGCTGCTCTTCAAGCT...GGAATAGAGACAGTGTCTGTGTCCACATCTATTTTCTGCACTAGGACACCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR TCA 90 bp | ATTTGGTGTCCTAGTGCAGAAAATAGATGTGGACACAGACACTGTCTCTATTCCAAGGACCTTAGTTTCTaGGAGGTTCTGGTTGTCCAT | + |
Preference number: 2 (lower is better) Translates to: IWCPSAENRCGHRHCLYSKDLSF*EVLVVH Trigger: ATGGACAACCAGAACCTCTCAGAAACTAAGGTCCTT...GGAATAGAGACAGTGTCTGTGTCCACATCTATTTTCTGCACTAGGACACCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR TCA 90 bp | CTGAAGCAATGCTTGACTAATAACAATCTTGTAATGCAAATGTCACCAAAGAAGAGCGAGCAGAGGTCCTaGATTCAATTCCCAGCAGCC | + |
Preference number: 2 (lower is better) Translates to: LKQCLTNNNLVMQMSPKKSEQRS*IQFPAA Trigger: GGCTGCTGGGAATTGAATTCAGGACCTCTGCTCGCT...CTTCTTTGGTGACATTTGCATTACAAGATTGTTATTAGTCAAGCATTGCTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR GCA 90 bp | TTTCTTTTCTCCCCGGGCTGCTCCACTTACATGGTGACCAGGAAATATAATATACAAGGCAGTCTATGCTaGATATGTGTCAAGGACCTT | + |
Preference number: 2 (lower is better) Translates to: FLFSPGCSTYMVTRKYNIQGSLC*ICVKDL Trigger: AAGGTCCTTGACACATATGCAGCATAGACTGCCTTG...TATATTATATTTCCTGGTCACCATGTAAGTGGAGCAGCCCGGGGAGAAAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR CCA 90 bp | CTGAAGCAATGCTTGACTAATAACAATCTTGTAATGCAAATGTCACCAAAGAAGCCCACTTCCCACCCTTaGAGGCTGCACACTCCAATT | + |
Preference number: 2 (lower is better) Translates to: LKQCLTNNNLVMQMSPKKPTSHP*RLHTPI Trigger: AATTGGAGTGTGCAGCCTCCAAGGGTGGGAAGTGGG...CTTCTTTGGTGACATTTGCATTACAAGATTGTTATTAGTCAAGCATTGCTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR CAA 90 bp | TTGAGACTTCTGATCATTCTATGGGGCACCATTCTCTTCAGCTTCTaGCAACTATTCCCTAATTTAACCACAGGGGTTCTCAGCTTTAGT | + |
Preference number: 2 (lower is better) Translates to: LRLLIILWGTILFSF*QLFPNLTTGVLSFS Trigger: ACTAAAGCTGAGAACCCCTGTGGTTAAATTAGGGAATAGTTGCAAGAAGCTGAAGAGAATGGTGCCCCATAGAATGATCAGAAGTCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR CAA 90 bp | TATCTACTTATCAGTGAGTACATACTATGTGTGTCTTTTTGGGAATaGGGTTACAAGAGCAAACTGACCAGAGCGAGCAGAGGTCCTGAA | + |
Preference number: 2 (lower is better) Translates to: YLLISEYILCVSFWE*GYKSKLTRASRGPE Trigger: TTCAGGACCTCTGCTCGCTCTGGTCAGTTTGCTCTTGTAACCCAATTCCCAAAAAGACACACATAGTATGTACTCACTGATAAGTAGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR CCA 90 bp | ATTTGGTGTCCTAGTGCAGAAAATAGATGTGGACACAGACACTGTCTCTATTCCGTTTCTGAGAGGTTCTaGTTGTCCATGTTAGTTGAG | + |
Preference number: 2 (lower is better) Translates to: IWCPSAENRCGHRHCLYSVSERF*LSMLVE Trigger: CTCAACTAACATGGACAACCAGAACCTCTCAGAAAC...GGAATAGAGACAGTGTCTGTGTCCACATCTATTTTCTGCACTAGGACACCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR CCA 90 bp | TTTCTTTTCTCCCCGGGCTGCTCCACTTACATGGTGACCAGGAAATATAATATAAACACACCTTTAATCTaGGCTACACCTTTCATCTGG | + |
Preference number: 2 (lower is better) Translates to: FLFSPGCSTYMVTRKYNINTPLI*ATPFIW Trigger: CCAGATGAAAGGTGTAGCCCAGATTAAAGGTGTGTT...TATATTATATTTCCTGGTCACCATGTAAGTGGAGCAGCCCGGGGAGAAAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR CCA 90 bp | AAAGAAGACTCATCAGAGAAGAAAACCACTCTTAATGTTAGACTTCATGGCCAGTTTTGTTCCAGCCATTaGACACCATTCTGCATCCCC | + |
Preference number: 2 (lower is better) Translates to: KEDSSEKKTTLNVRLHGQFCSSH*TPFCIP Trigger: GGGGATGCAGAATGGTGTCCAATGGCTGGAACAAAA...CTGGCCATGAAGTCTAACATTAAGAGTGGTTTTCTTCTCTGATGAGTCTTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR CCA 90 bp | ATTTGGTGTCCTAGTGCAGAAAATAGATGTGGACACAGACACTGTCTCTATTCCTCTTTCTGTGTCCTGTaGTTATTTTGTTTCCCCTTC | + |
Preference number: 2 (lower is better) Translates to: IWCPSAENRCGHRHCLYSSFCVL*LFCFPF Trigger: GAAGGGGAAACAAAATAACCACAGGACACAGAAAGA...GGAATAGAGACAGTGTCTGTGTCCACATCTATTTTCTGCACTAGGACACCAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR CAA 90 bp | GAAGGATTTATTCTAGTTGCAAACACTCAATTGTCTTTTTGGAAATaGCACTTTCTAGGAAGCAGCATAGTCAAAGCCTCAGGCTCCCAT | + |
Preference number: 2 (lower is better) Translates to: EGFILVANTQLSFWK*HFLGSSIVKASGSH Trigger: ATGGGAGCCTGAGGCTTTGACTATGCTGCTTCCTAGAAAGTGCAATTTCCAAAAAGACAATTGAGTGTTTGCAACTAGAATAAATCCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR CCA 90 bp | ATTTGGTGTCCTAGTGCAGAAAATAGATGTGGACACAGACACTGTCTCTATTCCCACATTTGGGAAATATaGGTAAGGTTACCTTCATTG | + |
Preference number: 2 (lower is better) Translates to: IWCPSAENRCGHRHCLYSHIWEI*VRLPSL Trigger: CAATGAAGGTAACCTTACCCATATTTCCCAAATGTG...GGAATAGAGACAGTGTCTGTGTCCACATCTATTTTCTGCACTAGGACACCAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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3UTR-3UTR TCA 90 bp | CTGAAGCAATGCTTGACTAATAACAATCTTGTAATGCAAATGTCACCAAAGAAGAAGGACCTTAGTTTCTaGGAGGTTCTGGTTGTCCAT | + |
Preference number: 2 (lower is better) Translates to: LKQCLTNNNLVMQMSPKKKDLSF*EVLVVH Trigger: ATGGACAACCAGAACCTCTCAGAAACTAAGGTCCTT...CTTCTTTGGTGACATTTGCATTACAAGATTGTTATTAGTCAAGCATTGCTTCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR TCA 90 bp | AAAGAAGACTCATCAGAGAAGAAAACCACTCTTAATGTTAGACTTCATGGCCAGCCTTCTAAGTGGGATTaGAACATTCTCTCTTATTCC | + |
Preference number: 2 (lower is better) Translates to: KEDSSEKKTTLNVRLHGQPSKWD*NILSYS Trigger: GGAATAAGAGAGAATGTTTCAATCCCACTTAGAAGG...CTGGCCATGAAGTCTAACATTAAGAGTGGTTTTCTTCTCTGATGAGTCTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR GCA 90 bp | CTGAAGCAATGCTTGACTAATAACAATCTTGTAATGCAAATGTCACCAAAGAAGCAAGGCAGTCTATGCTaGATATGTGTCAAGGACCTT | + |
Preference number: 2 (lower is better) Translates to: LKQCLTNNNLVMQMSPKKQGSLC*ICVKDL Trigger: AAGGTCCTTGACACATATGCAGCATAGACTGCCTTG...CTTCTTTGGTGACATTTGCATTACAAGATTGTTATTAGTCAAGCATTGCTTCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR GCA 90 bp | AAAGAAGACTCATCAGAGAAGAAAACCACTCTTAATGTTAGACTTCATGGCCAGCTGTGTATGTATTTTTaGCTACCTGTGTGTCAGTGT | + |
Preference number: 2 (lower is better) Translates to: KEDSSEKKTTLNVRLHGQLCMYF*LPVCQC Trigger: ACACTGACACACAGGTAGGCAAAAATACATACACAG...CTGGCCATGAAGTCTAACATTAAGAGTGGTTTTCTTCTCTGATGAGTCTTCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR CCA 90 bp | AAAGAAGACTCATCAGAGAAGAAAACCACTCTTAATGTTAGACTTCATGGCCAGGGATTAAAGGTGTGGTaGAACACATCTTTAATCTGG | + |
Preference number: 2 (lower is better) Translates to: KEDSSEKKTTLNVRLHGQGLKVW*NTSLIW Trigger: CCAGATTAAAGATGTGTTCCACCACACCTTTAATCC...CTGGCCATGAAGTCTAACATTAAGAGTGGTTTTCTTCTCTGATGAGTCTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR GCA 90 bp | CTGAAGCAATGCTTGACTAATAACAATCTTGTAATGCAAATGTCACCAAAGAAGAGTGTAGCACATGAATaGAATGTCTATGGAGTCCTG | + |
Preference number: 2 (lower is better) Translates to: LKQCLTNNNLVMQMSPKKSVAHE*NVYGVL Trigger: CAGGACTCCATAGACATTGCATTCATGTGCTACACT...CTTCTTTGGTGACATTTGCATTACAAGATTGTTATTAGTCAAGCATTGCTTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR CCA 90 bp | CTGAAGCAATGCTTGACTAATAACAATCTTGTAATGCAAATGTCACCAAAGAAGGGGCAGAAGATACACTaGAAAGTCAGTTTCAAAGTG | + |
Preference number: 2 (lower is better) Translates to: LKQCLTNNNLVMQMSPKKGQKIH*KVSFKV Trigger: CACTTTGAAACTGACTTTCCAGTGTATCTTCTGCCC...CTTCTTTGGTGACATTTGCATTACAAGATTGTTATTAGTCAAGCATTGCTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR GCA 90 bp | CTGAAGCAATGCTTGACTAATAACAATCTTGTAATGCAAATGTCACCAAAGAAGAAACTCAATCACAACTaGAAACTGAGTGCAGTCTCT | + |
Preference number: 2 (lower is better) Translates to: LKQCLTNNNLVMQMSPKKKLNHN*KLSAVS Trigger: AGAGACTGCACTCAGTTTGCAGTTGTGATTGAGTTT...CTTCTTTGGTGACATTTGCATTACAAGATTGTTATTAGTCAAGCATTGCTTCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR GCA 90 bp | CTGAAGCAATGCTTGACTAATAACAATCTTGTAATGCAAATGTCACCAAAGAAGCTGTGTATGTATTTTTaGCTACCTGTGTGTCAGTGT | + |
Preference number: 2 (lower is better) Translates to: LKQCLTNNNLVMQMSPKKLCMYF*LPVCQC Trigger: ACACTGACACACAGGTAGGCAAAAATACATACACAG...CTTCTTTGGTGACATTTGCATTACAAGATTGTTATTAGTCAAGCATTGCTTCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR CAA 90 bp | TCCAGCCATTGGACACCATTCTGCATCCCCCTCCTACAACTCCTCATCCCATTCACCCACTTCCCACCCTaGGAGGCTGCACACTCCAAT | + |
Preference number: 3 (lower is better) Translates to: SSHWTPFCIPLLQLLIPFTHFPP*EAAHSN Trigger: ATTGGAGTGTGCAGCCTCCAAGGGTGGGAAGTGGGT...GAATGGGATGAGGAGTTGTAGGAGGGGGATGCAGAATGGTGTCCAATGGCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR GCA 72 bp | TCCTTAAGGGTCCACCCACTTCCCACCCTTGGAGGCTaGACACTCCAATTCATTCTCCTGGCTCTCTGGACT | + |
Preference number: 3 (lower is better) Translates to: SLRVHPLPTLGG*TLQFILLALWT Trigger: AGTCCAGAGAGCCAGGAGAATGAATTGGAGTGTGCAGCCTCCAAGGGTGGGAAGTGGGTGGACCCTTAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR CAA 90 bp | CCAGAGCGAGCAGAGGTCCTGAATTCAATTCCCAGCAGCCACGTAATGGCTCACTGCTCCTTCACCTGCTaGCTGTGTGAGACTGAGTAC | + |
Preference number: 3 (lower is better) Translates to: PERAEVLNSIPSSHVMAHCSFTC*LCETEY Trigger: GTACTCAGTCTCACACAGCAAGCAGGTGAAGGAGCA...GTGAGCCATTACGTGGCTGCTGGGAATTGAATTCAGGACCTCTGCTCGCTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR CCA 72 bp | GGAGGCTGCACACTCCAATTCATTCTCCTGGCTCTCTaGACTTCTCTCAAGCACCCCTCTCCACAAACAACT | + |
Preference number: 3 (lower is better) Translates to: GGCTLQFILLAL*TSLKHPSPQTT Trigger: AGTTGTTTGTGGAGAGGGGTGCTTGAGAGAAGTCCAGAGAGCCAGGAGAATGAATTGGAGTGTGCAGCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR GCA 72 bp | CTTGCCTCTCATAGAGTGCTTACTAACTTCCCTCTCTaGCCCTACACCAGGCATTTCACTTCTCTGGAGCCT | + |
Preference number: 3 (lower is better) Translates to: LASHRVLTNFPL*PYTRHFTSLEP Trigger: AGGCTCCAGAGAAGTGAAATGCCTGGTGTAGGGGCAGAGAGGGAAGTTAGTAAGCACTCTATGAGAGGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR CAA 90 bp | CCAGAGCGAGCAGAGGTCCTGAATTCAATTCCCAGCAGCCACGTAATGGCTCACGACAATATAAGGACATaGGAAGAAGGGAGTCTAGCT | + |
Preference number: 3 (lower is better) Translates to: PERAEVLNSIPSSHVMAHDNIRT*EEGSLA Trigger: AGCTAGACTCCCTTCTTCCAATGTCCTTATATTGTC...GTGAGCCATTACGTGGCTGCTGGGAATTGAATTCAGGACCTCTGCTCGCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR CAA 90 bp | TCCAGCCATTGGACACCATTCTGCATCCCCCTCCTACAACTCCTCATCCCATTCTGTCCTGTGGTTATTTaGTTTCCCCTTCTAAGTGGG | + |
Preference number: 3 (lower is better) Translates to: SSHWTPFCIPLLQLLIPFCPVVI*FPLLSG Trigger: CCCACTTAGAAGGGGAAACAAAATAACCACAGGACA...GAATGGGATGAGGAGTTGTAGGAGGGGGATGCAGAATGGTGTCCAATGGCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR CAA 90 bp | TGTATTACTTCCTTAAGGGTCCACCCACTTCCCACCCTTGGAGGCTGCACACTCCTCATTTTTCTTCCATaGAGATTTGCCCCTGGTAAC | + |
Preference number: 3 (lower is better) Translates to: CITSLRVHPLPTLGGCTLLIFLP*RFAPGN Trigger: GTTACCAGGGGCAAATCTCAATGGAAGAAAAATGAG...GAGTGTGCAGCCTCCAAGGGTGGGAAGTGGGTGGACCCTTAAGGAAGTAATACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR CAA 90 bp | TGTATTACTTCCTTAAGGGTCCACCCACTTCCCACCCTTGGAGGCTGCACACTCGACAATATAAGGACATaGGAAGAAGGGAGTCTAGCT | + |
Preference number: 3 (lower is better) Translates to: CITSLRVHPLPTLGGCTLDNIRT*EEGSLA Trigger: AGCTAGACTCCCTTCTTCCAATGTCCTTATATTGTC...GAGTGTGCAGCCTCCAAGGGTGGGAAGTGGGTGGACCCTTAAGGAAGTAATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR CAA 90 bp | CCAGAGCGAGCAGAGGTCCTGAATTCAATTCCCAGCAGCCACGTAATGGCTCACTTGTCTTTTTGGAAATaGCACTTTCTAGGAAGCAGC | + |
Preference number: 3 (lower is better) Translates to: PERAEVLNSIPSSHVMAHLSFWK*HFLGSS Trigger: GCTGCTTCCTAGAAAGTGCAATTTCCAAAAAGACAA...GTGAGCCATTACGTGGCTGCTGGGAATTGAATTCAGGACCTCTGCTCGCTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR GCA 72 bp | TCTAGGAAGCAGCATAGTCAAAGCCTCAGGCTCCCATaGCACCCTTTGAGATTATCTTCCTCCAGAAACTCA | + |
Preference number: 3 (lower is better) Translates to: SRKQHSQSLRLP*HPLRLSSSRNS Trigger: TGAGTTTCTGGAGGAAGATAATCTCAAAGGGTGGCATGGGAGCCTGAGGCTTTGACTATGCTGCTTCCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR CCA 72 bp | TATCTGCCCCCATGCCTTAGGAAGCACCATGACAGATaGAGACAAAGGAATGTAACAGCTGAGAGAATGGAG | + |
Preference number: 3 (lower is better) Translates to: YLPPCLRKHHDR*RQRNVTAERME Trigger: CTCCATTCTCTCAGCTGTTACATTCCTTTGTCTCCATCTGTCATGGTGCTTCCTAAGGCATGGGGGCAGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR CAA 90 bp | CCTTCTGCTGGAGACAATATAAGGACATTGGAAGAAGGGAGTCTAGCTCTTGCTGCGAGTGAACAATTGTaGGGAATTGGGCTGACGACT | + |
Preference number: 3 (lower is better) Translates to: PSAGDNIRTLEEGSLALAASEQL*GIGLTT Trigger: AGTCGTCAGCCCAATTCCCAACAATTGTTCACTCGC...AGCAAGAGCTAGACTCCCTTCTTCCAATGTCCTTATATTGTCTCCAGCAGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR CAA 90 bp | ATTTGGTGTCCTAGTGCAGAAAATAGATGTGGACACAGACACTGTCTCTATTCCTGCTCCTTCACCTGCTaGCTGTGTGAGACTGAGTAC | + |
Preference number: 3 (lower is better) Translates to: IWCPSAENRCGHRHCLYSCSFTC*LCETEY Trigger: GTACTCAGTCTCACACAGCAAGCAGGTGAAGGAGCA...GGAATAGAGACAGTGTCTGTGTCCACATCTATTTTCTGCACTAGGACACCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR CAA 90 bp | TCCAGCCATTGGACACCATTCTGCATCCCCCTCCTACAACTCCTCATCCCATTCCACTCAATTGTCTTTTaGGAAATTGCACTTTCTAGG | + |
Preference number: 3 (lower is better) Translates to: SSHWTPFCIPLLQLLIPFHSIVF*EIALSR Trigger: CCTAGAAAGTGCAATTTCCAAAAAGACAATTGAGTG...GAATGGGATGAGGAGTTGTAGGAGGGGGATGCAGAATGGTGTCCAATGGCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR TCA 72 bp | TCAGGATTCTGGGGTGTTAGGTGTGCCTTCTATCAATaGGGTCAGACAAGGCAGTCTATGCTGCATATGTGT | + |
Preference number: 3 (lower is better) Translates to: SGFWGVRCAFYQ*GQTRQSMLHMC Trigger: ACACATATGCAGCATAGACTGCCTTGTCTGACCTCATTGATAGAAGGCACACCTAACACCCCAGAATCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR TCA 72 bp | AGCATAGTCAAAGCCTCAGGCTCCCATGCCACCCTTTaGGATTATCTTCCTCCAGAAACTCAATCACAACTG | + |
Preference number: 3 (lower is better) Translates to: SIVKASGSHATL*DYLPPETQSQL Trigger: CAGTTGTGATTGAGTTTCTGGAGGAAGATAATCTCAAAGGGTGGCATGGGAGCCTGAGGCTTTGACTATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR TCA 72 bp | GTGTGTCTTTTTGGGAATTGGGTTACAAGAGCAAACTaGCCAGAGCGAGCAGAGGTCCTGAATTCAATTCCC | + |
Preference number: 3 (lower is better) Translates to: VCLFGNWVTRAN*PERAEVLNSIP Trigger: GGGAATTGAATTCAGGACCTCTGCTCGCTCTGGTCAGTTTGCTCTTGTAACCCAATTCCCAAAAAGACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR CCA 72 bp | ATTGGAAGGCTCACCAGTGACCCTTATCTGGAGGCTTaGAGATCCTTATCTGGATCTTGGTTTGGAGATCAT | + |
Preference number: 3 (lower is better) Translates to: IGRLTSDPYLEA*RSLSGSWFGDH Trigger: ATGATCTCCAAACCAAGATCCAGATAAGGATCTCCAAGCCTCCAGATAAGGGTCACTGGTGAGCCTTCCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR TCA 72 bp | CTGCTAGATCCTTGGAATTCTATTCACAGCTGCGAGTaGACAATTGTTGGGAATTGGGCTGACGACTGTAAG | + |
Preference number: 3 (lower is better) Translates to: LLDPWNSIHSCE*TIVGNWADDCK Trigger: CTTACAGTCGTCAGCCCAATTCCCAACAATTGTTCACTCGCAGCTGTGAATAGAATTCCAAGGATCTAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR GCA 72 bp | GTGGTGGAACACATCTTTAATCTGGGCTACACCTTCTaGTGGAGACAATATAAGGACATTGGAAGAAGGGAG | + |
Preference number: 3 (lower is better) Translates to: VVEHIFNLGYTF*WRQYKDIGRRE Trigger: CTCCCTTCTTCCAATGTCCTTATATTGTCTCCAGCAGAAGGTGTAGCCCAGATTAAAGATGTGTTCCACCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR GCA 72 bp | ATTTTTGCCTACCTGTGTGTCAGTGTAGCACATGAATaGAATGTCTATGGAGTCCTGAGTAGGGCAGAAGAT | + |
Preference number: 3 (lower is better) Translates to: IFAYLCVSVAHE*NVYGVLSRAED Trigger: ATCTTCTGCCCTACTCAGGACTCCATAGACATTGCATTCATGTGCTACACTGACACACAGGTAGGCAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR CCA 72 bp | ACCAAAGGAATACGGTTTCAATGGAACTGCCCCATTTaGTGTCCTAGTGCAGAAAATAGATGTGGACACAGA | + |
Preference number: 3 (lower is better) Translates to: TKGIRFQWNCPI*CPSAENRCGHR Trigger: TCTGTGTCCACATCTATTTTCTGCACTAGGACACCAAATGGGGCAGTTCCATTGAAACCGTATTCCTTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR TCA 72 bp | CATTTTAGACCATTGTCTGATAGCTTGAAGAGCAGCTaGAGAGAACAGGCAATATCTCTCATGTGTGTGCTC | + |
Preference number: 3 (lower is better) Translates to: HFRPLSDSLKSS*REQAISLMCVL Trigger: GAGCACACACATGAGAGATATTGCCTGTTCTCTTCAGCTGCTCTTCAAGCTATCAGACAATGGTCTAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR CCA 72 bp | TTGGGAAATATGGGTAAGGTTACCTTCATTGAGTCCTaGAGTCTCTCAGCTCTCAGTTCTGTATTACTTCCT | + |
Preference number: 3 (lower is better) Translates to: LGNMGKVTFIES*SLSALSSVLLP Trigger: AGGAAGTAATACAGAACTGAGAGCTGAGAGACTCCAGGACTCAATGAAGGTAACCTTACCCATATTTCCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR CAA 90 bp | TTTCTTTTCTCCCCGGGCTGCTCCACTTACATGGTGACCAGGAAATATAATATACTCATTTTTCTTCCATaGAGATTTGCCCCTGGTAAC | + |
Preference number: 3 (lower is better) Translates to: FLFSPGCSTYMVTRKYNILIFLP*RFAPGN Trigger: GTTACCAGGGGCAAATCTCAATGGAAGAAAAATGAG...TATATTATATTTCCTGGTCACCATGTAAGTGGAGCAGCCCGGGGAGAAAAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR CAA 90 bp | ATTTGGTGTCCTAGTGCAGAAAATAGATGTGGACACAGACACTGTCTCTATTCCTCTGTGTATGTATTTTaGCCTACCTGTGTGTCAGTG | + |
Preference number: 3 (lower is better) Translates to: IWCPSAENRCGHRHCLYSSVYVF*PTCVSV Trigger: CACTGACACACAGGTAGGCAAAAATACATACACAGA...GGAATAGAGACAGTGTCTGTGTCCACATCTATTTTCTGCACTAGGACACCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR TCA 72 bp | TTGGAGATCCTTATCTGGATCTTGGTTTGGAGATCATaGGCCAAAGTGGCTATGGATTCCAGAAGATTGAAT | + |
Preference number: 3 (lower is better) Translates to: LEILIWILVWRS*AKVAMDSRRLN Trigger: ATTCAATCTTCTGGAATCCATAGCCACTTTGGCTCATGATCTCCAAACCAAGATCCAGATAAGGATCTCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR CCA 72 bp | GCATATGTGTCAAGGACCTTAGTTTCTGAGAGGTTCTaGTTGTCCATGTTAGTTGAGACTTCTGATCATTCT | + |
Preference number: 3 (lower is better) Translates to: AYVSRTLVSERF*LSMLVETSDHS Trigger: AGAATGATCAGAAGTCTCAACTAACATGGACAACCAGAACCTCTCAGAAACTAAGGTCCTTGACACATATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR CCA 72 bp | GTAGTGGCTATTCCTGGTTGTCAACTTGACTATATTTaGAATGAACTACAATCCAGAATTGGAAGGCTCACC | + |
Preference number: 3 (lower is better) Translates to: VVAIPGCQLDYI*NELQSRIGRLT Trigger: GGTGAGCCTTCCAATTCTGGATTGTAGTTCATTCCAAATATAGTCAAGTTGACAACCAGGAATAGCCACTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR CCA 72 bp | CTACTTATCAGTGAGTACATACTATGTGTGTCTTTTTaGGAATTGGGTTACAAGAGCAAACTGACCAGAGCG | + |
Preference number: 3 (lower is better) Translates to: LLISEYILCVSF*ELGYKSKLTRA Trigger: CGCTCTGGTCAGTTTGCTCTTGTAACCCAATTCCCAAAAAGACACACATAGTATGTACTCACTGATAAGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR CAA 90 bp | TTTCTTTTCTCCCCGGGCTGCTCCACTTACATGGTGACCAGGAAATATAATATACACTCAATTGTCTTTTaGGAAATTGCACTTTCTAGG | + |
Preference number: 3 (lower is better) Translates to: FLFSPGCSTYMVTRKYNIHSIVF*EIALSR Trigger: CCTAGAAAGTGCAATTTCCAAAAAGACAATTGAGTG...TATATTATATTTCCTGGTCACCATGTAAGTGGAGCAGCCCGGGGAGAAAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR CAA 90 bp | CTGAAGCAATGCTTGACTAATAACAATCTTGTAATGCAAATGTCACCAAAGAAGTTTTTGTTCCAGCCATaGGACACCATTCTGCATCCC | + |
Preference number: 3 (lower is better) Translates to: LKQCLTNNNLVMQMSPKKFLFQP*DTILHP Trigger: GGGATGCAGAATGGTGTCCAATGGCTGGAACAAAAA...CTTCTTTGGTGACATTTGCATTACAAGATTGTTATTAGTCAAGCATTGCTTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR TCA 72 bp | GGAATCCATGGGAATCTACCAACTTCCCAGGCAATTTaGAAAATCATAGGTTGTCTTCAACAAACTGATAGC | + |
Preference number: 3 (lower is better) Translates to: GIHGNLPTSQAI*KIIGCLQQTDS Trigger: GCTATCAGTTTGTTGAAGACAACCTATGATTTTTCAAATTGCCTGGGAAGTTGGTAGATTCCCATGGATTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR-3UTR CAA 90 bp | AAAGAAGACTCATCAGAGAAGAAAACCACTCTTAATGTTAGACTTCATGGCCAGACTATGTGTGTCTTTTaGGGAATTGGGTTACAAGAG | + |
Preference number: 3 (lower is better) Translates to: KEDSSEKKTTLNVRLHGQTMCVF*GIGLQE Trigger: CTCTTGTAACCCAATTCCCAAAAAGACACACATAGT...CTGGCCATGAAGTCTAACATTAAGAGTGGTTTTCTTCTCTGATGAGTCTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR GCA 72 bp | AGATATTTAACCAAAGGAATACGGTTTCAATGGAACTaGCCCATTTGGTGTCCTAGTGCAGAAAATAGATGT | + |
Preference number: 3 (lower is better) Translates to: RYLTKGIRFQWN*PIWCPSAENRC Trigger: ACATCTATTTTCTGCACTAGGACACCAAATGGGGCAGTTCCATTGAAACCGTATTCCTTTGGTTAAATATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR TCA 72 bp | TCCTGTGGTTATTTTGTTTCCCCTTCTAAGTGGGATTaGAACATTCTCTCTTATTCCTTCCTAAAGGTTGAA | + |
Preference number: 3 (lower is better) Translates to: SCGYFVSPSKWD*NILSYSFLKVE Trigger: TTCAACCTTTAGGAAGGAATAAGAGAGAATGTTTCAATCCCACTTAGAAGGGGAAACAAAATAACCACAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR GCA 72 bp | ATGTGGACACAGACACTGTCTCTATTCCTGAAGCAATaGTTGACTAATAACAATCTTGTAATGCAAATGTCA | + |
Preference number: 3 (lower is better) Translates to: MWTQTLSLFLKQ*LTNNNLVMQMS Trigger: TGACATTTGCATTACAAGATTGTTATTAGTCAAGCATTGCTTCAGGAATAGAGACAGTGTCTGTGTCCACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR TCA 72 bp | TTATCTTCCTCCAGAAACTCAATCACAACTGCAAACTaGGTGCAGTCTCTGAGAAAAATTAGTTTTATGCAA | + |
Preference number: 3 (lower is better) Translates to: LSSSRNSITTAN*VQSLRKISFMQ Trigger: TTGCATAAAACTAATTTTTCTCAGAGACTGCACTCAGTTTGCAGTTGTGATTGAGTTTCTGGAGGAAGATAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR TCA 72 bp | GTATTCTGTACTTTTCGGCAAATATCTACTTATCAGTaGGTACATACTATGTGTGTCTTTTTGGGAATTGGG | + |
Preference number: 3 (lower is better) Translates to: VFCTFRQISTYQ*VHTMCVFLGIG Trigger: CCCAATTCCCAAAAAGACACACATAGTATGTACTCACTGATAAGTAGATATTTGCCGAAAAGTACAGAATAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR TCA 72 bp | TCCGGTATGTCAAAAATTAGGCATATCTTTTCTTACTaGGGCCTGACCATGCATTATTCTGATATATATCAG | + |
Preference number: 3 (lower is better) Translates to: SGMSKIRHIFSY*GLTMHYSDIYQ Trigger: CTGATATATATCAGAATAATGCATGGTCAGGCCTCAGTAAGAAAAGATATGCCTAATTTTTGACATACCGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR TCA 72 bp | AATACACAATATTGTCTCGAGGAGACACTGTTTTCATaGTCAAGTATGAGATACAGGTACCTAAAAACCAAA | + |
Preference number: 3 (lower is better) Translates to: NTQYCLEETLFS*SSMRYRYLKTK Trigger: TTTGGTTTTTAGGTACCTGTATCTCATACTTGATCATGAAAACAGTGTCTCCTCGAGACAATATTGTGTATT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR GCA 90 bp | TGTATTACTTCCTTAAGGGTCCACCCACTTCCCACCCTTGGAGGCTGCACACTCACATCCAAGAATCCCTaGACTGGATGCCAGGATGGA | + |
Preference number: 4 (lower is better) Translates to: CITSLRVHPLPTLGGCTLTSKNP*TGCQDG Trigger: TCCATCCTGGCATCCAGTGCAGGGATTCTTGGATGT...GAGTGTGCAGCCTCCAAGGGTGGGAAGTGGGTGGACCCTTAAGGAAGTAATACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | CCAGAGCGAGCAGAGGTCCTGAATTCAATTCCCAGCAGCCACGTAATGGCTCACGAACTGCTCCAAGGATaGAAGAACAAGTTTGATCCA | + |
Preference number: 4 (lower is better) Translates to: PERAEVLNSIPSSHVMAHELLQG*KNKFDP Trigger: TGGATCAAACTTGTTCTTTCATCCTTGGAGCAGTTC...GTGAGCCATTACGTGGCTGCTGGGAATTGAATTCAGGACCTCTGCTCGCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | CCAGAGCGAGCAGAGGTCCTGAATTCAATTCCCAGCAGCCACGTAATGGCTCACGCACACAGAACACATTaGAATAGGCAACATATGGGA | + |
Preference number: 4 (lower is better) Translates to: PERAEVLNSIPSSHVMAHAHRTH*NRQHMG Trigger: TCCCATATGTTGCCTATTTCAATGTGTTCTGTGTGC...GTGAGCCATTACGTGGCTGCTGGGAATTGAATTCAGGACCTCTGCTCGCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR CCA 90 bp | TCCAGCCATTGGACACCATTCTGCATCCCCCTCCTACAACTCCTCATCCCATTCTCTCAACCTTCTTCCTaGGCCTGTGAATTTGAAAGC | + |
Preference number: 4 (lower is better) Translates to: SSHWTPFCIPLLQLLIPFSQPSS*ACEFES Trigger: GCTTTCAAATTCACAGGCCCAGGAAGAAGGTTGAGA...GAATGGGATGAGGAGTTGTAGGAGGGGGATGCAGAATGGTGTCCAATGGCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
||
3UTR CAA 72 bp | CCCTCCTACAACTCCTCATCCCATTCTTCCTCCCACTaGCCTCTCATAGAGTGCTTACTAACTTCCCTCTCT | + |
Preference number: 4 (lower is better) Translates to: PSYNSSSHSSSH*PLIECLLTSLS Trigger: AGAGAGGGAAGTTAGTAAGCACTCTATGAGAGGCAAGTGGGAGGAAGAATGGGATGAGGAGTTGTAGGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | TGTATTACTTCCTTAAGGGTCCACCCACTTCCCACCCTTGGAGGCTGCACACTCGAACTGCTCCAAGGATaGAAGAACAAGTTTGATCCA | + |
Preference number: 4 (lower is better) Translates to: CITSLRVHPLPTLGGCTLELLQG*KNKFDP Trigger: TGGATCAAACTTGTTCTTTCATCCTTGGAGCAGTTC...GAGTGTGCAGCCTCCAAGGGTGGGAAGTGGGTGGACCCTTAAGGAAGTAATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | TTTCTTTTCTCCCCGGGCTGCTCCACTTACATGGTGACCAGGAAATATAATATAGGCAGAGGCTGCAAGTaGAACAGCAGGCTTCCACTC | + |
Preference number: 4 (lower is better) Translates to: FLFSPGCSTYMVTRKYNIGRGCK*NSRLPL Trigger: GAGTGGAAGCCTGCTGTTTCACTTGCAGCCTCTGCC...TATATTATATTTCCTGGTCACCATGTAAGTGGAGCAGCCCGGGGAGAAAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | TGTATTACTTCCTTAAGGGTCCACCCACTTCCCACCCTTGGAGGCTGCACACTCGGAATTTGGCTTCATTaGATGTGTCAGGTAGATTCC | + |
Preference number: 4 (lower is better) Translates to: CITSLRVHPLPTLGGCTLGIWLH*MCQVDS Trigger: GGAATCTACCTGACACATTCAATGAAGCCAAATTCC...GAGTGTGCAGCCTCCAAGGGTGGGAAGTGGGTGGACCCTTAAGGAAGTAATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR GCA 90 bp | TGTATTACTTCCTTAAGGGTCCACCCACTTCCCACCCTTGGAGGCTGCACACTCCATAGGCATCTGAACTaGTCCAAGGATGAAAGAACA | + |
Preference number: 4 (lower is better) Translates to: CITSLRVHPLPTLGGCTLHRHLN*SKDERT Trigger: TGTTCTTTCATCCTTGGAGCAGTTCAGATGCCTATG...GAGTGTGCAGCCTCCAAGGGTGGGAAGTGGGTGGACCCTTAAGGAAGTAATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR CCA 90 bp | CCAGAGCGAGCAGAGGTCCTGAATTCAATTCCCAGCAGCCACGTAATGGCTCACGAAATCTCACCATGGTaGGGTAGAAAAGTAAAAGTC | + |
Preference number: 4 (lower is better) Translates to: PERAEVLNSIPSSHVMAHEISPW*GRKVKV Trigger: GACTTTTACTTTTCTACCCCACCATGGTGAGATTTC...GTGAGCCATTACGTGGCTGCTGGGAATTGAATTCAGGACCTCTGCTCGCTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR CAA 72 bp | TGGGCTACACCTTCTGCTGGAGACAATATAAGGACATaGGAAGAAGGGAGTCTAGCTCTTGCTCCTTCACCT | + |
Preference number: 4 (lower is better) Translates to: WATPSAGDNIRT*EEGSLALAPSP Trigger: AGGTGAAGGAGCAAGAGCTAGACTCCCTTCTTCCAATGTCCTTATATTGTCTCCAGCAGAAGGTGTAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | TCCAGCCATTGGACACCATTCTGCATCCCCCTCCTACAACTCCTCATCCCATTCCAGTTGAGGCATATGTaGAAATGTGAGAGATTCCTA | + |
Preference number: 4 (lower is better) Translates to: SSHWTPFCIPLLQLLIPFQLRHM*KCERFL Trigger: TAGGAATCTCTCACATTTTCACATATGCCTCAACTG...GAATGGGATGAGGAGTTGTAGGAGGGGGATGCAGAATGGTGTCCAATGGCTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | TGTATTACTTCCTTAAGGGTCCACCCACTTCCCACCCTTGGAGGCTGCACACTCCAGTTGAGGCATATGTaGAAATGTGAGAGATTCCTA | + |
Preference number: 4 (lower is better) Translates to: CITSLRVHPLPTLGGCTLQLRHM*KCERFL Trigger: TAGGAATCTCTCACATTTTCACATATGCCTCAACTG...GAGTGTGCAGCCTCCAAGGGTGGGAAGTGGGTGGACCCTTAAGGAAGTAATACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR GCA 90 bp | CCTTCTGCTGGAGACAATATAAGGACATTGGAAGAAGGGAGTCTAGCTCTTGCTACATCCAAGAATCCCTaGACTGGATGCCAGGATGGA | + |
Preference number: 4 (lower is better) Translates to: PSAGDNIRTLEEGSLALATSKNP*TGCQDG Trigger: TCCATCCTGGCATCCAGTGCAGGGATTCTTGGATGT...AGCAAGAGCTAGACTCCCTTCTTCCAATGTCCTTATATTGTCTCCAGCAGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR CCA 90 bp | TGTATTACTTCCTTAAGGGTCCACCCACTTCCCACCCTTGGAGGCTGCACACTCGAAATCTCACCATGGTaGGGTAGAAAAGTAAAAGTC | + |
Preference number: 4 (lower is better) Translates to: CITSLRVHPLPTLGGCTLEISPW*GRKVKV Trigger: GACTTTTACTTTTCTACCCCACCATGGTGAGATTTC...GAGTGTGCAGCCTCCAAGGGTGGGAAGTGGGTGGACCCTTAAGGAAGTAATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR CCA 90 bp | ACTAATACACCCCCTGACTCTTCTGCATTTCTTACCTCTTCCCCCATCTCCAAGGGAGTGCATGGGCCATaGCATAGACAGCATTGTATA | + |
Preference number: 4 (lower is better) Translates to: TNTPPDSSAFLTSSPISKGVHGP*HRQHCI Trigger: TATACAATGCTGTCTATGCCATGGCCCATGCACTCC...CTTGGAGATGGGGGAAGAGGTAAGAAATGCAGAAGAGTCAGGGGGTGTATTAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | TCCAGCCATTGGACACCATTCTGCATCCCCCTCCTACAACTCCTCATCCCATTCCCAAATCTTTACCATTaGCTTCATTCAGGTTTAGTC | + |
Preference number: 4 (lower is better) Translates to: SSHWTPFCIPLLQLLIPFPNLYH*LHSGLV Trigger: GACTAAACCTGAATGAAGTCAATGGTAAAGATTTGG...GAATGGGATGAGGAGTTGTAGGAGGGGGATGCAGAATGGTGTCCAATGGCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | TCCAGCCATTGGACACCATTCTGCATCCCCCTCCTACAACTCCTCATCCCATTCTCCTGTAAGCAGAAATaGACACTTAGTCTCTTCATT | + |
Preference number: 4 (lower is better) Translates to: SSHWTPFCIPLLQLLIPFSCKQK*TLSLFI Trigger: AATGAAGAGACTAAGTGTTCATTTCTGCTTACAGGA...GAATGGGATGAGGAGTTGTAGGAGGGGGATGCAGAATGGTGTCCAATGGCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | TGTATTACTTCCTTAAGGGTCCACCCACTTCCCACCCTTGGAGGCTGCACACTCTCCTGTAAGCAGAAATaGACACTTAGTCTCTTCATT | + |
Preference number: 4 (lower is better) Translates to: CITSLRVHPLPTLGGCTLSCKQK*TLSLFI Trigger: AATGAAGAGACTAAGTGTTCATTTCTGCTTACAGGA...GAGTGTGCAGCCTCCAAGGGTGGGAAGTGGGTGGACCCTTAAGGAAGTAATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | TGTATTACTTCCTTAAGGGTCCACCCACTTCCCACCCTTGGAGGCTGCACACTCAGTGGAAATAAAGTATaGAGTAGACCATTGCCAATG | + |
Preference number: 4 (lower is better) Translates to: CITSLRVHPLPTLGGCTLSGNKV*SRPLPM Trigger: CATTGGCAATGGTCTACTTCATACTTTATTTCCACT...GAGTGTGCAGCCTCCAAGGGTGGGAAGTGGGTGGACCCTTAAGGAAGTAATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR GCA 90 bp | CCAGAGCGAGCAGAGGTCCTGAATTCAATTCCCAGCAGCCACGTAATGGCTCACTATGTAGATCTTGGGTaGAAAGATACATCCAAGAAT | + |
Preference number: 4 (lower is better) Translates to: PERAEVLNSIPSSHVMAHYVDLG*KDTSKN Trigger: ATTCTTGGATGTATCTTTGCACCCAAGATCTACATA...GTGAGCCATTACGTGGCTGCTGGGAATTGAATTCAGGACCTCTGCTCGCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR CCA 90 bp | CCAGAGCGAGCAGAGGTCCTGAATTCAATTCCCAGCAGCCACGTAATGGCTCACTCTGTGCTTTTGAGATaGAACAATGTTTGTAGGAAA | + |
Preference number: 4 (lower is better) Translates to: PERAEVLNSIPSSHVMAHSVLLR*NNVCRK Trigger: TTTCCTACAAACATTGTTCCATCTCAAAAGCACAGA...GTGAGCCATTACGTGGCTGCTGGGAATTGAATTCAGGACCTCTGCTCGCTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR CCA 90 bp | TCCAGCCATTGGACACCATTCTGCATCCCCCTCCTACAACTCCTCATCCCATTCAAAGTGTTCACCATGTaGAAAATATGGGCTGAACTT | + |
Preference number: 4 (lower is better) Translates to: SSHWTPFCIPLLQLLIPFKVFTM*KIWAEL Trigger: AAGTTCAGCCCATATTTTCCACATGGTGAACACTTT...GAATGGGATGAGGAGTTGTAGGAGGGGGATGCAGAATGGTGTCCAATGGCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS-3UTR CCA 90 bp | ACTAATACACCCCCTGACTCTTCTGCATTTCTTACCTCTTCCCCCATCTCCAAGCACTGGATGCCAGGATaGAGAAAATCTCTACAGCAA | + |
Preference number: 4 (lower is better) Translates to: TNTPPDSSAFLTSSPISKHWMPG*RKSLQQ Trigger: TTGCTGTAGAGATTTTCTCCATCCTGGCATCCAGTG...CTTGGAGATGGGGGAAGAGGTAAGAAATGCAGAAGAGTCAGGGGGTGTATTAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR CCA 90 bp | TCCAGCCATTGGACACCATTCTGCATCCCCCTCCTACAACTCCTCATCCCATTCTCTCAACCTTCTTCCTaGGCTTGTATCATTAGAAAT | + |
Preference number: 4 (lower is better) Translates to: SSHWTPFCIPLLQLLIPFSQPSS*ACIIRN Trigger: ATTTCTAATGATACAAGCCCAGGAAGAAGGTTGAGA...GAATGGGATGAGGAGTTGTAGGAGGGGGATGCAGAATGGTGTCCAATGGCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | CCTTCTGCTGGAGACAATATAAGGACATTGGAAGAAGGGAGTCTAGCTCTTGCTAAAGTACCAGAGCTGTaGATGCAGAGAAGCAAAAGG | + |
Preference number: 4 (lower is better) Translates to: PSAGDNIRTLEEGSLALAKVPEL*MQRSKR Trigger: CCTTTTGCTTCTCTGCATTCACAGCTCTGGTACTTT...AGCAAGAGCTAGACTCCCTTCTTCCAATGTCCTTATATTGTCTCCAGCAGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
||
CDS-3UTR TCA 90 bp | TTCCCAATTTCTGGAATCTCAGGATTCTGGGGTGTTAGGTGTGCCTTCTATCAATCTCTACAGCAACCATaGCCTTGCCCTTTGTGCTAT | + |
Preference number: 4 (lower is better) Translates to: FPISGISGFWGVRCAFYQSLQQP*PCPLCY Trigger: ATAGCACAAAGGGCAAGGTCATGGTTGCTGTAGAGA...TTGATAGAAGGCACACCTAACACCCCAGAATCCTGAGATTCCAGAAATTGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR GCA 90 bp | CCTTCTGCTGGAGACAATATAAGGACATTGGAAGAAGGGAGTCTAGCTCTTGCTATAGGAGTGTCATGGTaGTTCACAAACGCCCAAAGT | + |
Preference number: 4 (lower is better) Translates to: PSAGDNIRTLEEGSLALAIGVSW*FTNAQS Trigger: ACTTTGGGCGTTTGTGAAGCACCATGACACTCCTAT...AGCAAGAGCTAGACTCCCTTCTTCCAATGTCCTTATATTGTCTCCAGCAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
||
CDS-3UTR CCA 90 bp | ATTTGGTGTCCTAGTGCAGAAAATAGATGTGGACACAGACACTGTCTCTATTCCTGTGCTATGGTAGACTaGGAGGAAGGTAACCCAGAC | + |
Preference number: 4 (lower is better) Translates to: IWCPSAENRCGHRHCLYSCAMVD*EEGNPD Trigger: GTCTGGGTTACCTTCCTCCCAGTCTACCATAGCACA...GGAATAGAGACAGTGTCTGTGTCCACATCTATTTTCTGCACTAGGACACCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR CAA 72 bp | CCCCACATTTGGGAAATATGGGTAAGGTTACCTTCATaGAGTCCTGGAGTCTCTCAGCTCTCAGTTCTGTAT | + |
Preference number: 4 (lower is better) Translates to: PHIWEIWVRLPS*SPGVSQLSVLY Trigger: ATACAGAACTGAGAGCTGAGAGACTCCAGGACTCAATGAAGGTAACCTTACCCATATTTCCCAAATGTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | CTGAAGCAATGCTTGACTAATAACAATCTTGTAATGCAAATGTCACCAAAGAAGGGCAGAGGCTGCAAGTaGAACAGCAGGCTTCCACTC | + |
Preference number: 4 (lower is better) Translates to: LKQCLTNNNLVMQMSPKKGRGCK*NSRLPL Trigger: GAGTGGAAGCCTGCTGTTTCACTTGCAGCCTCTGCC...CTTCTTTGGTGACATTTGCATTACAAGATTGTTATTAGTCAAGCATTGCTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | TTCCCAATTTCTGGAATCTCAGGATTCTGGGGTGTTAGGTGTGCCTTCTATCAAGTGACTCTGTTAGGGTaGCCAATGAAGAAAAAGGTG | + |
Preference number: 4 (lower is better) Translates to: FPISGISGFWGVRCAFYQVTLLG*PMKKKV Trigger: CACCTTTTTCTTCATTGGTCACCCTAACAGAGTCAC...TTGATAGAAGGCACACCTAACACCCCAGAATCCTGAGATTCCAGAAATTGGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
||
CDS-3UTR CCA 90 bp | TTCCCAATTTCTGGAATCTCAGGATTCTGGGGTGTTAGGTGTGCCTTCTATCAACACTGGATGCCAGGATaGAGAAAATCTCTACAGCAA | + |
Preference number: 4 (lower is better) Translates to: FPISGISGFWGVRCAFYQHWMPG*RKSLQQ Trigger: TTGCTGTAGAGATTTTCTCCATCCTGGCATCCAGTG...TTGATAGAAGGCACACCTAACACCCCAGAATCCTGAGATTCCAGAAATTGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR CAA 72 bp | CTGATCATTCTATGGGGCACCATTCTCTTCAGCTTCTaGCAACTATTCCCTAATTTAACCACAGGGGTTCTC | + |
Preference number: 4 (lower is better) Translates to: LIILWGTILFSF*QLFPNLTTGVL Trigger: GAGAACCCCTGTGGTTAAATTAGGGAATAGTTGCAAGAAGCTGAAGAGAATGGTGCCCCATAGAATGATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR GCA 90 bp | TTCCCAATTTCTGGAATCTCAGGATTCTGGGGTGTTAGGTGTGCCTTCTATCAACATAGGCATCTGAACTaGTCCAAGGATGAAAGAACA | + |
Preference number: 4 (lower is better) Translates to: FPISGISGFWGVRCAFYQHRHLN*SKDERT Trigger: TGTTCTTTCATCCTTGGAGCAGTTCAGATGCCTATG...TTGATAGAAGGCACACCTAACACCCCAGAATCCTGAGATTCCAGAAATTGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR GCA 90 bp | CCTTCTGCTGGAGACAATATAAGGACATTGGAAGAAGGGAGTCTAGCTCTTGCTCATCGAAAACGCCAATaGCAAAGCATATTTGTGGTT | + |
Preference number: 4 (lower is better) Translates to: PSAGDNIRTLEEGSLALAHRKRQ*QSIFVV Trigger: AACCACAAATATGCTTTGGCATTGGCGTTTTCGATG...AGCAAGAGCTAGACTCCCTTCTTCCAATGTCCTTATATTGTCTCCAGCAGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR GCA 90 bp | CCTTCTGCTGGAGACAATATAAGGACATTGGAAGAAGGGAGTCTAGCTCTTGCTTCACAGCTTTCTGCATaGATTTGTTCTGTTCTGTGT | + |
Preference number: 4 (lower is better) Translates to: PSAGDNIRTLEEGSLALASQLSA*ICSVLC Trigger: ACACAGAACAGAACAAATGCATGCAGAAAGCTGTGA...AGCAAGAGCTAGACTCCCTTCTTCCAATGTCCTTATATTGTCTCCAGCAGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
||
CDS-3UTR GCA 90 bp | ATTTGGTGTCCTAGTGCAGAAAATAGATGTGGACACAGACACTGTCTCTATTCCTACCAGAGCTGTGAATaGAGAGAAGCAAAAGGCCAT | + |
Preference number: 4 (lower is better) Translates to: IWCPSAENRCGHRHCLYSYQSCE*REAKGH Trigger: ATGGCCTTTTGCTTCTCTGCATTCACAGCTCTGGTA...GGAATAGAGACAGTGTCTGTGTCCACATCTATTTTCTGCACTAGGACACCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
||
CDS-3UTR CCA 90 bp | ACTAATACACCCCCTGACTCTTCTGCATTTCTTACCTCTTCCCCCATCTCCAAGAAAGTGTTCACCATGTaGAAAATATGGGCTGAACTT | + |
Preference number: 4 (lower is better) Translates to: TNTPPDSSAFLTSSPISKKVFTM*KIWAEL Trigger: AAGTTCAGCCCATATTTTCCACATGGTGAACACTTT...CTTGGAGATGGGGGAAGAGGTAAGAAATGCAGAAGAGTCAGGGGGTGTATTAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR CAA 72 bp | ATCAGTGAGTACATACTATGTGTGTCTTTTTGGGAATaGGGTTACAAGAGCAAACTGACCAGAGCGAGCAGA | + |
Preference number: 4 (lower is better) Translates to: ISEYILCVSFWE*GYKSKLTRASR Trigger: TCTGCTCGCTCTGGTCAGTTTGCTCTTGTAACCCAATTCCCAAAAAGACACACATAGTATGTACTCACTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR CAA 72 bp | TCTGCCTCCTTCCTCTTTCTGTGTCCTGTGGTTATTTaGTTTCCCCTTCTAAGTGGGATTGAAACATTCTCT | + |
Preference number: 4 (lower is better) Translates to: SASFLFLCPVVI*FPLLSGIETFS Trigger: AGAGAATGTTTCAATCCCACTTAGAAGGGGAAACAAAATAACCACAGGACACAGAAAGAGGAAGGAGGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | TTTCTTTTCTCCCCGGGCTGCTCCACTTACATGGTGACCAGGAAATATAATATAGCACACAGAACACATTaGAATAGGCAACATATGGGA | + |
Preference number: 4 (lower is better) Translates to: FLFSPGCSTYMVTRKYNIAHRTH*NRQHMG Trigger: TCCCATATGTTGCCTATTTCAATGTGTTCTGTGTGC...TATATTATATTTCCTGGTCACCATGTAAGTGGAGCAGCCCGGGGAGAAAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS-3UTR GCA 90 bp | CCTTCTGCTGGAGACAATATAAGGACATTGGAAGAAGGGAGTCTAGCTCTTGCTATTCCAAATGTGATTTaGTGTAAGACACAGGTGACT | + |
Preference number: 4 (lower is better) Translates to: PSAGDNIRTLEEGSLALAIPNVI*CKTQVT Trigger: AGTCACCTGTGTCTTACAGCAAATCACATTTGGAAT...AGCAAGAGCTAGACTCCCTTCTTCCAATGTCCTTATATTGTCTCCAGCAGAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
||
CDS-3UTR GCA 90 bp | AAAGAAGACTCATCAGAGAAGAAAACCACTCTTAATGTTAGACTTCATGGCCAGAATCCCTGCACTGGATaGCAGGATGGAGAAAATCTC | + |
Preference number: 4 (lower is better) Translates to: KEDSSEKKTTLNVRLHGQNPCTG*QDGENL Trigger: GAGATTTTCTCCATCCTGGCATCCAGTGCAGGGATT...CTGGCCATGAAGTCTAACATTAAGAGTGGTTTTCTTCTCTGATGAGTCTTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS-3UTR CCA 90 bp | CCTTCTGCTGGAGACAATATAAGGACATTGGAAGAAGGGAGTCTAGCTCTTGCTTCAAGCAGTGAGAACTaGCTACTTTTCCATTATCTA | + |
Preference number: 4 (lower is better) Translates to: PSAGDNIRTLEEGSLALASSSEN*LLFHYL Trigger: TAGATAATGGAAAAGTAGCCAGTTCTCACTGCTTGA...AGCAAGAGCTAGACTCCCTTCTTCCAATGTCCTTATATTGTCTCCAGCAGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS-3UTR TCA 90 bp | TTCCCAATTTCTGGAATCTCAGGATTCTGGGGTGTTAGGTGTGCCTTCTATCAACCAAATCTTTACCATTaGCTTCATTCAGGTTTAGTC | + |
Preference number: 4 (lower is better) Translates to: FPISGISGFWGVRCAFYQPNLYH*LHSGLV Trigger: GACTAAACCTGAATGAAGTCAATGGTAAAGATTTGG...TTGATAGAAGGCACACCTAACACCCCAGAATCCTGAGATTCCAGAAATTGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS-3UTR TCA 90 bp | TTCCCAATTTCTGGAATCTCAGGATTCTGGGGTGTTAGGTGTGCCTTCTATCAAAATCCCAAGGTGTTTTaGGAGATTCCAAAAGTGAAA | + |
Preference number: 4 (lower is better) Translates to: FPISGISGFWGVRCAFYQNPKVF*EIPKVK Trigger: TTTCACTTTTGGAATCTCTCAAAACACCTTGGGATT...TTGATAGAAGGCACACCTAACACCCCAGAATCCTGAGATTCCAGAAATTGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR CCA 90 bp | CTGAAGCAATGCTTGACTAATAACAATCTTGTAATGCAAATGTCACCAAAGAAGTGTGCTATGGTAGACTaGGAGGAAGGTAACCCAGAC | + |
Preference number: 4 (lower is better) Translates to: LKQCLTNNNLVMQMSPKKCAMVD*EEGNPD Trigger: GTCTGGGTTACCTTCCTCCCAGTCTACCATAGCACA...CTTCTTTGGTGACATTTGCATTACAAGATTGTTATTAGTCAAGCATTGCTTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | TTTCTTTTCTCCCCGGGCTGCTCCACTTACATGGTGACCAGGAAATATAATATAAGTGGAAATAAAGTATaGAGTAGACCATTGCCAATG | + |
Preference number: 4 (lower is better) Translates to: FLFSPGCSTYMVTRKYNISGNKV*SRPLPM Trigger: CATTGGCAATGGTCTACTTCATACTTTATTTCCACT...TATATTATATTTCCTGGTCACCATGTAAGTGGAGCAGCCCGGGGAGAAAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | CTGAAGCAATGCTTGACTAATAACAATCTTGTAATGCAAATGTCACCAAAGAAGTCTCTACAGCAACCATaGCCTTGCCCTTTGTGCTAT | + |
Preference number: 4 (lower is better) Translates to: LKQCLTNNNLVMQMSPKKSLQQP*PCPLCY Trigger: ATAGCACAAAGGGCAAGGTCATGGTTGCTGTAGAGA...CTTCTTTGGTGACATTTGCATTACAAGATTGTTATTAGTCAAGCATTGCTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR CCA 90 bp | TTCCCAATTTCTGGAATCTCAGGATTCTGGGGTGTTAGGTGTGCCTTCTATCAATCTGTGCTTTTGAGATaGAACAATGTTTGTAGGAAA | + |
Preference number: 4 (lower is better) Translates to: FPISGISGFWGVRCAFYQSVLLR*NNVCRK Trigger: TTTCCTACAAACATTGTTCCATCTCAAAAGCACAGA...TTGATAGAAGGCACACCTAACACCCCAGAATCCTGAGATTCCAGAAATTGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR CAA 72 bp | TATGTGTCAAGGACCTTAGTTTCTGAGAGGTTCTGGTaGTCCATGTTAGTTGAGACTTCTGATCATTCTATG | + |
Preference number: 4 (lower is better) Translates to: YVSRTLVSERFW*SMLVETSDHSM Trigger: CATAGAATGATCAGAAGTCTCAACTAACATGGACAACCAGAACCTCTCAGAAACTAAGGTCCTTGACACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR GCA 90 bp | ATTTGGTGTCCTAGTGCAGAAAATAGATGTGGACACAGACACTGTCTCTATTCCAATATCACAGCTTTCTaGATGCATTTGTTCTGTTCT | + |
Preference number: 4 (lower is better) Translates to: IWCPSAENRCGHRHCLYSNITAF*MHLFCS Trigger: AGAACAGAACAAATGCATGCAGAAAGCTGTGATATT...GGAATAGAGACAGTGTCTGTGTCCACATCTATTTTCTGCACTAGGACACCAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
||
3UTR CAA 72 bp | TGGACACAGACACTGTCTCTATTCCTGAAGCAATGCTaGACTAATAACAATCTTGTAATGCAAATGTCACCA | + |
Preference number: 4 (lower is better) Translates to: WTQTLSLFLKQC*TNNNLVMQMSP Trigger: TGGTGACATTTGCATTACAAGATTGTTATTAGTCAAGCATTGCTTCAGGAATAGAGACAGTGTCTGTGTCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | AAAGAAGACTCATCAGAGAAGAAAACCACTCTTAATGTTAGACTTCATGGCCAGAATCCCAAGGTGTTTTaGGAGATTCCAAAAGTGAAA | + |
Preference number: 4 (lower is better) Translates to: KEDSSEKKTTLNVRLHGQNPKVF*EIPKVK Trigger: TTTCACTTTTGGAATCTCTCAAAACACCTTGGGATT...CTGGCCATGAAGTCTAACATTAAGAGTGGTTTTCTTCTCTGATGAGTCTTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | CTGAAGCAATGCTTGACTAATAACAATCTTGTAATGCAAATGTCACCAAAGAAGGGAATTTGGCTTCATTaGATGTGTCAGGTAGATTCC | + |
Preference number: 4 (lower is better) Translates to: LKQCLTNNNLVMQMSPKKGIWLH*MCQVDS Trigger: GGAATCTACCTGACACATTCAATGAAGCCAAATTCC...CTTCTTTGGTGACATTTGCATTACAAGATTGTTATTAGTCAAGCATTGCTTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR TCA 90 bp | CTGAAGCAATGCTTGACTAATAACAATCTTGTAATGCAAATGTCACCAAAGAAGGATCAGGATTTCTGTTaGTTTCATCCATCGAAAACG | + |
Preference number: 4 (lower is better) Translates to: LKQCLTNNNLVMQMSPKKDQDFC*FHPSKT Trigger: CGTTTTCGATGGATGAAATCAACAGAAATCCTGATC...CTTCTTTGGTGACATTTGCATTACAAGATTGTTATTAGTCAAGCATTGCTTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR GCA 90 bp | CTGAAGCAATGCTTGACTAATAACAATCTTGTAATGCAAATGTCACCAAAGAAGCATCGAAAACGCCAATaGCAAAGCATATTTGTGGTT | + |
Preference number: 4 (lower is better) Translates to: LKQCLTNNNLVMQMSPKKHRKRQ*QSIFVV Trigger: AACCACAAATATGCTTTGGCATTGGCGTTTTCGATG...CTTCTTTGGTGACATTTGCATTACAAGATTGTTATTAGTCAAGCATTGCTTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR GCA 90 bp | AAAGAAGACTCATCAGAGAAGAAAACCACTCTTAATGTTAGACTTCATGGCCAGTATGTAGATCTTGGGTaGAAAGATACATCCAAGAAT | + |
Preference number: 4 (lower is better) Translates to: KEDSSEKKTTLNVRLHGQYVDLG*KDTSKN Trigger: ATTCTTGGATGTATCTTTGCACCCAAGATCTACATA...CTGGCCATGAAGTCTAACATTAAGAGTGGTTTTCTTCTCTGATGAGTCTTCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR CCA 90 bp | CTGAAGCAATGCTTGACTAATAACAATCTTGTAATGCAAATGTCACCAAAGAAGTCAAGCAGTGAGAACTaGCTACTTTTCCATTATCTA | + |
Preference number: 4 (lower is better) Translates to: LKQCLTNNNLVMQMSPKKSSSEN*LLFHYL Trigger: TAGATAATGGAAAAGTAGCCAGTTCTCACTGCTTGA...CTTCTTTGGTGACATTTGCATTACAAGATTGTTATTAGTCAAGCATTGCTTCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR CAA 72 bp | AGGATTTATTCTAGTTGCAAACACTCAATTGTCTTTTaGGAAATTGCACTTTCTAGGAAGCAGCATAGTCAA | + |
Preference number: 4 (lower is better) Translates to: RIYSSCKHSIVF*EIALSRKQHSQ Trigger: TTGACTATGCTGCTTCCTAGAAAGTGCAATTTCCAAAAAGACAATTGAGTGTTTGCAACTAGAATAAATCCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
3UTR CAA 72 bp | ATTATTCTGATATATATCAGAAATTTTGACTCTGGGTaGATAAGCCTATCCCTCTACTTGAGGCTATCTCTA | + |
Preference number: 4 (lower is better) Translates to: IILIYIRNFDSG*ISLSLYLRLSL Trigger: TAGAGATAGCCTCAAGTAGAGGGATAGGCTTATCAACCCAGAGTCAAAATTTCTGATATATATCAGAATAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
||
CDS-3UTR CAA 90 bp | ACTAATACACCCCCTGACTCTTCTGCATTTCTTACCTCTTCCCCCATCTCCAAGCCTGGGCCTGTGAATTaGAAAGCCAGAATGACAGTG | + |
Preference number: 5 (lower is better) Translates to: TNTPPDSSAFLTSSPISKPGPVN*KARMTV Trigger: CACTGTCATTCTGGCTTTCAAATTCACAGGCCCAGG...CTTGGAGATGGGGGAAGAGGTAAGAAATGCAGAAGAGTCAGGGGGTGTATTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
||
CDS GCA 90 bp | TTCCACTCTCTCCTTCCAAGATCTTCTGAATCCAGGACCACAATCTaGACTGCACACAGAGGATGGCATCTTTCTACTTCCTGTAGCCAA | + |
Preference number: 5 (lower is better) Translates to: FHSLLPRSSESRTTI*TAHRGWHLSTSCSQ Trigger: TTGGCTACAGGAAGTAGAAAGATGCCATCCTCTGTGTGCAGTGCAGATTGTGGTCCTGGATTCAGAAGATCTTGGAAGGAGAGAGTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS-3UTR CAA 90 bp | TCCAGCCATTGGACACCATTCTGCATCCCCCTCCTACAACTCCTCATCCCATTCAGGAATTTGGCTTCATaGAATGTGTCAGGTAGATTC | + |
Preference number: 5 (lower is better) Translates to: SSHWTPFCIPLLQLLIPFRNLAS*NVSGRF Trigger: GAATCTACCTGACACATTCAATGAAGCCAAATTCCT...GAATGGGATGAGGAGTTGTAGGAGGGGGATGCAGAATGGTGTCCAATGGCTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS CCA 90 bp | GTAGTTGGGAGTCCCAGATACCAAGATGTTTCTCAACCTTCTTCCTaGGCCTGTGAATTTGAAAGCCAGAATGACAGTGACTGTTTTGGC | + |
Preference number: 5 (lower is better) Translates to: VVGSPRYQDVSQPSS*ACEFESQNDSDCFG Trigger: GCCAAAACAGTCACTGTCATTCTGGCTTTCAAATTCACAGGCCCAGGAAGAAGGTTGAGAAACATCTTGGTATCTGGGACTCCCAACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
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CDS TCA 90 bp | TGCCAGGCAGGCCAAGTATCCCAGTACACAGTAGAATGCAGTAACTaGGCCCTTGTTACATACAAGAATAATGTTCCCATGCTCAGAATG | + |
Preference number: 5 (lower is better) Translates to: CQAGQVSQYTVECSN*ALVTYKNNVPMLRM Trigger: CATTCTGAGCATGGGAACATTATTCTTGTATGTAACAAGGGCTCAGTTACTGCATTCTACTGTGTACTGGGATACTTGGCCTGCCTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS-3UTR CAA 90 bp | CCTTCTGCTGGAGACAATATAAGGACATTGGAAGAAGGGAGTCTAGCTCTTGCTGCTTTCTGCATGCATTaGTTCTGTTCTGTGTTGGCA | + |
Preference number: 5 (lower is better) Translates to: PSAGDNIRTLEEGSLALAAFCMH*FCSVLA Trigger: TGCCAACACAGAACAGAACAAATGCATGCAGAAAGC...AGCAAGAGCTAGACTCCCTTCTTCCAATGTCCTTATATTGTCTCCAGCAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
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CDS CCA 90 bp | GTAGTTGGGAGTCCCAGATACCAAGATGTTTCTCAACCTTCTTCCTaGGCTTGTATCATTAGAAATTTCATTTTCAGGGCAGAGGCTGCA | + |
Preference number: 5 (lower is better) Translates to: VVGSPRYQDVSQPSS*ACIIRNFIFRAEAA Trigger: TGCAGCCTCTGCCCTGAAAATGAAATTTCTAATGATACAAGCCCAGGAAGAAGGTTGAGAAACATCTTGGTATCTGGGACTCCCAACTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232927.2 |
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CDS GCA 90 bp | GCCATCCCCAAGGGGTCTTCATATCTTAGAAATATCACAGCTTTCTaGATGCATTTGTTCTGTTCTGTGTTGGCATACTGGTATTCTGGA | + |
Preference number: 5 (lower is better) Translates to: AIPKGSSYLRNITAF*MHLFCSVLAYWYSG Trigger: TCCAGAATACCAGTATGCCAACACAGAACAGAACAAATGCATGCAGAAAGCTGTGATATTTCTAAGATATGAAGACCCCTTGGGGATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
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CDS GCA 90 bp | GATAGAATTTCTCTCAGGTCTCAAGAAAATTATGTAGATCTTGGGTaGAAAGATACATCCAAGAATCCCTGCACTGGATGCCAGGATGGA | + |
Preference number: 5 (lower is better) Translates to: DRISLRSQENYVDLG*KDTSKNPCTGCQDG Trigger: TCCATCCTGGCATCCAGTGCAGGGATTCTTGGATGTATCTTTGCACCCAAGATCTACATAATTTTCTTGAGACCTGAGAGAAATTCTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS GCA 90 bp | ATCTATTGCCTGATTATCAACCTGTTGAAGATTTGTCTCATGGAGTaGATGGGCCATGGCATAGACAGCATTGTATATGTTTTGGCTATC | + |
Preference number: 5 (lower is better) Translates to: IYCLIINLLKICLME*MGHGIDSIVYVLAI Trigger: GATAGCCAAAACATATACAATGCTGTCTATGCCATGGCCCATGCACTCCATGAGACAAATCTTCAACAGGTTGATAATCAGGCAATAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS GCA 90 bp | TCCCCAAGGGGTCTTCATATCTTAGAAATATCACAGCTTTCTGCATaGATTTGTTCTGTTCTGTGTTGGCATACTGGTATTCTGGACAAT | + |
Preference number: 5 (lower is better) Translates to: SPRGLHILEISQLSA*ICSVLCWHTGILDN Trigger: ATTGTCCAGAATACCAGTATGCCAACACAGAACAGAACAAATGCATGCAGAAAGCTGTGATATTTCTAAGATATGAAGACCCCTTGGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
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CDS GCA 90 bp | GTTTACCTTCAAGCAGTGAGAACTGGCTACTTTTCCATTATCTATTaGCTGATTATCAACCTGTTGAAGATTTGTCTCATGGAGTGCATG | + |
Preference number: 5 (lower is better) Translates to: VYLQAVRTGYFSIIY*LIINLLKICLMECM Trigger: CATGCACTCCATGAGACAAATCTTCAACAGGTTGATAATCAGGCAATAGATAATGGAAAAGTAGCCAGTTCTCACTGCTTGAAGGTAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS-3UTR CAA 90 bp | AAAGAAGACTCATCAGAGAAGAAAACCACTCTTAATGTTAGACTTCATGGCCAGAATGCATCTGTGCTTTaGAGATGGAACAATGTTTGT | + |
Preference number: 5 (lower is better) Translates to: KEDSSEKKTTLNVRLHGQNASVL*RWNNVC Trigger: ACAAACATTGTTCCATCTCAAAAGCACAGATGCATT...CTGGCCATGAAGTCTAACATTAAGAGTGGTTTTCTTCTCTGATGAGTCTTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS TCA 90 bp | ATCTTTCTACTTCCTGTAGCCAACTCAAACATGTCTAAATGTAATTaGAAGTGTTCACCATGTGGAAAATATGGGCTGAACTTTCCTAAC | + |
Preference number: 5 (lower is better) Translates to: IFLLPVANSNMSKCN*KCSPCGKYGLNFPN Trigger: GTTAGGAAAGTTCAGCCCATATTTTCCACATGGTGAACACTTTCAATTACATTTAGACATGTTTGAGTTGGCTACAGGAAGTAGAAAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS CCA 90 bp | TTTCTGCATGCATTTGTTCTGTTCTGTGTTGGCATACTGGTATTCTaGACAATTCACACAGTGATCCATATTTGTATCATTAGAAATTTC | + |
Preference number: 5 (lower is better) Translates to: FLHAFVLFCVGILVF*TIHTVIHICIIRNF Trigger: GAAATTTCTAATGATACAAATATGGATCACTGTGTGAATTGTCCAGAATACCAGTATGCCAACACAGAACAGAACAAATGCATGCAGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
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CDS-3UTR CAA 90 bp | CTGAAGCAATGCTTGACTAATAACAATCTTGTAATGCAAATGTCACCAAAGAAGAATGCATCTGTGCTTTaGAGATGGAACAATGTTTGT | + |
Preference number: 5 (lower is better) Translates to: LKQCLTNNNLVMQMSPKKNASVL*RWNNVC Trigger: ACAAACATTGTTCCATCTCAAAAGCACAGATGCATT...CTTCTTTGGTGACATTTGCATTACAAGATTGTTATTAGTCAAGCATTGCTTCAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS TCA 72 bp | AACAGCAGGCTTCCACTCTCTCCTTCCAAGATCTTCTaGATCCAGGACCACAATCTGCACTGCACACAGAGG | + |
Preference number: 6 (lower is better) Translates to: NSRLPLSPSKIF*IQDHNLHCTQR Trigger: CCTCTGTGTGCAGTGCAGATTGTGGTCCTGGATTCAGAAGATCTTGGAAGGAGAGAGTGGAAGCCTGCTGTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS TCA 72 bp | ATGTGTCAGGTAGATTCCTTGCCAAGAAAGCCACAGTaGAGCTTCCAAGTGCCAGGCAGGCCAAGTATCCCA | + |
Preference number: 6 (lower is better) Translates to: MCQVDSLPRKPQ*SFQVPGRPSIP Trigger: TGGGATACTTGGCCTGCCTGGCACTTGGAAGCTTCACTGTGGCTTTCTTGGCAAGGAATCTACCTGACACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS GCA 72 bp | CTCCTTCCAAGATCTTCTGAATCCAGGACCACAATCTaGACTGCACACAGAGGATGGCATCTTTCTACTTCC | + |
Preference number: 6 (lower is better) Translates to: LLPRSSESRTTI*TAHRGWHLSTS Trigger: GGAAGTAGAAAGATGCCATCCTCTGTGTGCAGTGCAGATTGTGGTCCTGGATTCAGAAGATCTTGGAAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS GCA 72 bp | GTAGATCTTGGGTGCAAAGATACATCCAAGAATCCCTaGACTGGATGCCAGGATGGAGAAAATCTCTACAGC | + |
Preference number: 6 (lower is better) Translates to: VDLGCKDTSKNP*TGCQDGENLYS Trigger: GCTGTAGAGATTTTCTCCATCCTGGCATCCAGTGCAGGGATTCTTGGATGTATCTTTGCACCCAAGATCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS CCA 72 bp | GAATCCAGGACCACAATCTGCACTGCACACAGAGGATaGCATCTTTCTACTTCCTGTAGCCAACTCAAACAT | + |
Preference number: 6 (lower is better) Translates to: ESRTTICTAHRG*HLSTSCSQLKH Trigger: ATGTTTGAGTTGGCTACAGGAAGTAGAAAGATGCCATCCTCTGTGTGCAGTGCAGATTGTGGTCCTGGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS CCA 72 bp | AGTCCCAGATACCAAGATGTTTCTCAACCTTCTTCCTaGGCCTGTGAATTTGAAAGCCAGAATGACAGTGAC | + |
Preference number: 6 (lower is better) Translates to: SPRYQDVSQPSS*ACEFESQNDSD Trigger: GTCACTGTCATTCTGGCTTTCAAATTCACAGGCCCAGGAAGAAGGTTGAGAAACATCTTGGTATCTGGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
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CDS CAA 90 bp | CCAGATACCAAGATGTTTCTCAACCTTCTTCCTGGGCCTGTGAATTaGAAAGCCAGAATGACAGTGACTGTTTTGGCCAAAACTGTGGAA | + |
Preference number: 6 (lower is better) Translates to: PDTKMFLNLLPGPVN*KARMTVTVLAKTVE Trigger: TTCCACAGTTTTGGCCAAAACAGTCACTGTCATTCTGGCTTTCAAATTCACAGGCCCAGGAAGAAGGTTGAGAAACATCTTGGTATCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
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CDS GCA 72 bp | ATTCTGTTATTGGCCTTCACAATAGGAGTGTCATGGTaGTTCACAAACGCCCAAAGTACCAGAGCTGTGAAT | + |
Preference number: 6 (lower is better) Translates to: ILLLAFTIGVSW*FTNAQSTRAVN Trigger: ATTCACAGCTCTGGTACTTTGGGCGTTTGTGAAGCACCATGACACTCCTATTGTGAAGGCCAATAACAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
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CDS CAA 90 bp | AGAACTGGCTACTTTTCCATTATCTATTGCCTGATTATCAACCTGTaGAAGATTTGTCTCATGGAGTGCATGGGCCATGGCATAGACAGC | + |
Preference number: 6 (lower is better) Translates to: RTGYFSIIYCLIINL*KICLMECMGHGIDS Trigger: GCTGTCTATGCCATGGCCCATGCACTCCATGAGACAAATCTTCAACAGGTTGATAATCAGGCAATAGATAATGGAAAAGTAGCCAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS TCA 72 bp | GTGATTTGCTGTAAGACACAGGTGACTCTGTTAGGGTaGCCAATGAAGAAAAAGGTGCACAGAAAACAGAAC | + |
Preference number: 6 (lower is better) Translates to: VICCKTQVTLLG*PMKKKVHRKQN Trigger: GTTCTGTTTTCTGTGCACCTTTTTCTTCATTGGTCACCCTAACAGAGTCACCTGTGTCTTACAGCAAATCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
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CDS TCA 72 bp | GGCCAAGTATCCCAGTACACAGTAGAATGCAGTAACTaGGCCCTTGTTACATACAAGAATAATGTTCCCATG | + |
Preference number: 6 (lower is better) Translates to: GQVSQYTVECSN*ALVTYKNNVPM Trigger: CATGGGAACATTATTCTTGTATGTAACAAGGGCTCAGTTACTGCATTCTACTGTGTACTGGGATACTTGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS GCA 72 bp | TCTCTCAGGTCTCAAGAAAATTATGTAGATCTTGGGTaGAAAGATACATCCAAGAATCCCTGCACTGGATGC | + |
Preference number: 6 (lower is better) Translates to: SLRSQENYVDLG*KDTSKNPCTGC Trigger: GCATCCAGTGCAGGGATTCTTGGATGTATCTTTGCACCCAAGATCTACATAATTTTCTTGAGACCTGAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS CCA 72 bp | CCTGTTGAAGATTTGTCTCATGGAGTGCATGGGCCATaGCATAGACAGCATTGTATATGTTTTGGCTATCAT | + |
Preference number: 6 (lower is better) Translates to: PVEDLSHGVHGP*HRQHCICFGYH Trigger: ATGATAGCCAAAACATATACAATGCTGTCTATGCCATGGCCCATGCACTCCATGAGACAAATCTTCAACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS CAA 72 bp | CATTATCTATTGCCTGATTATCAACCTGTTGAAGATTaGTCTCATGGAGTGCATGGGCCATGGCATAGACAG | + |
Preference number: 6 (lower is better) Translates to: HYLLPDYQPVED*SHGVHGPWHRQ Trigger: CTGTCTATGCCATGGCCCATGCACTCCATGAGACAAATCTTCAACAGGTTGATAATCAGGCAATAGATAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS TCA 72 bp | CACACAGAACACATTGAAATAGGCAACATATGGGAATaGTGTAGTTGGGAGTCCCAGATACCAAGATGTTTC | + |
Preference number: 6 (lower is better) Translates to: HTEHIEIGNIWE*CSWESQIPRCF Trigger: GAAACATCTTGGTATCTGGGACTCCCAACTACATCATTCCCATATGTTGCCTATTTCAATGTGTTCTGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS GCA 72 bp | CTGATTATCAACCTGTTGAAGATTTGTCTCATGGAGTaGATGGGCCATGGCATAGACAGCATTGTATATGTT | + |
Preference number: 6 (lower is better) Translates to: LIINLLKICLME*MGHGIDSIVYV Trigger: AACATATACAATGCTGTCTATGCCATGGCCCATGCACTCCATGAGACAAATCTTCAACAGGTTGATAATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS CAA 72 bp | TGTGTCCTTTGGGGCCATCTGATAGACATAGGGATATaGTTCAATATCATTGATGATGGAACTGTAAGGTCC | + |
Preference number: 6 (lower is better) Translates to: CVLWGHLIDIGI*FNIIDDGTVRS Trigger: GGACCTTACAGTTCCATCATCAATGATATTGAACAATATCCCTATGTCTATCAGATGGCCCCAAAGGACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS CAA 72 bp | CAATATCAACAAATGGAGGAGAGACTGCTAGCCAGATaGCACACAGAACACATTGAAATAGGCAACATATGG | + |
Preference number: 6 (lower is better) Translates to: QYQQMEERLLAR*HTEHIEIGNIW Trigger: CCATATGTTGCCTATTTCAATGTGTTCTGTGTGCAATCTGGCTAGCAGTCTCTCCTCCATTTGTTGATATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS CCA 72 bp | AGTCCCAGATACCAAGATGTTTCTCAACCTTCTTCCTaGGCTTGTATCATTAGAAATTTCATTTTCAGGGCA | + |
Preference number: 6 (lower is better) Translates to: SPRYQDVSQPSS*ACIIRNFIFRA Trigger: TGCCCTGAAAATGAAATTTCTAATGATACAAGCCCAGGAAGAAGGTTGAGAAACATCTTGGTATCTGGGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232927.2 |
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CDS CAA 90 bp | AAGGGGTCTTCATATCTTAGAAATATCACAGCTTTCTGCATGCATTaGTTCTGTTCTGTGTTGGCATACTGGTATTCTGGACAATTCACA | + |
Preference number: 6 (lower is better) Translates to: KGSSYLRNITAFCMH*FCSVLAYWYSGQFT Trigger: TGTGAATTGTCCAGAATACCAGTATGCCAACACAGAACAGAACAAATGCATGCAGAAAGCTGTGATATTTCTAAGATATGAAGACCCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
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CDS GCA 72 bp | CAAGCAGTGAGAACTGGCTACTTTTCCATTATCTATTaGCTGATTATCAACCTGTTGAAGATTTGTCTCATG | + |
Preference number: 6 (lower is better) Translates to: QAVRTGYFSIIY*LIINLLKICLM Trigger: CATGAGACAAATCTTCAACAGGTTGATAATCAGGCAATAGATAATGGAAAAGTAGCCAGTTCTCACTGCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS CCA 72 bp | TTCATAATTACTTTGTCCCCAAGAGGATTAGTAAAGTaGGTCTTTCTCAGAAAGGAGTTTACCTTCAAGCAG | + |
Preference number: 6 (lower is better) Translates to: FIITLSPRGLVK*VFLRKEFTFKQ Trigger: CTGCTTGAAGGTAAACTCCTTTCTGAGAAAGACCCACTTTACTAATCCTCTTGGGGACAAAGTAATTATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS CAA 72 bp | AGGCATCTGAACTGCTCCAAGGATGAAAGAACAAGTTaGATCCAAATCTTTACCATTGACTTCATTCAGGTT | + |
Preference number: 6 (lower is better) Translates to: RHLNCSKDERTS*IQIFTIDFIQV Trigger: AACCTGAATGAAGTCAATGGTAAAGATTTGGATCAAACTTGTTCTTTCATCCTTGGAGCAGTTCAGATGCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS GCA 72 bp | ACTGAGCCCTTGTTACATACAAGAATAATGTTCCCATaGTCAGAATGTTCATCAATATCAACAAATGGAGGA | + |
Preference number: 6 (lower is better) Translates to: TEPLLHTRIMFP*SECSSISTNGG Trigger: TCCTCCATTTGTTGATATTGATGAACATTCTGAGCATGGGAACATTATTCTTGTATGTAACAAGGGCTCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS CCA 72 bp | TTCTCAGAAAGGAGTTTACCTTCAAGCAGTGAGAACTaGCTACTTTTCCATTATCTATTGCCTGATTATCAA | + |
Preference number: 6 (lower is better) Translates to: FSERSLPSSSEN*LLFHYLLPDYQ Trigger: TTGATAATCAGGCAATAGATAATGGAAAAGTAGCCAGTTCTCACTGCTTGAAGGTAAACTCCTTTCTGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS CCA 72 bp | GCATTTGTTCTGTTCTGTGTTGGCATACTGGTATTCTaGACAATTCACACAGTGATCCATATTTGTATCATT | + |
Preference number: 6 (lower is better) Translates to: AFVLFCVGILVF*TIHTVIHICII Trigger: AATGATACAAATATGGATCACTGTGTGAATTGTCCAGAATACCAGTATGCCAACACAGAACAGAACAAATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164918.3 |
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CDS TCA 72 bp | TCAAAGACATATTTGGTAAAAGATCAGGATTTCTGTTaGTTTCATCCATCGAAAACGCCAATGCCAAAGCAT | + |
Preference number: 6 (lower is better) Translates to: SKTYLVKDQDFC*FHPSKTPMPKH Trigger: ATGCTTTGGCATTGGCGTTTTCGATGGATGAAATCAACAGAAATCCTGATCTTTTACCAAATATGTCTTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS TCA 72 bp | TCCACTCTGGCATTACTAGAAATGCATCTGTGCTTTTaGGATGGAACAATGTTTGTAGGAAATTTTTATAGC | + |
Preference number: 6 (lower is better) Translates to: STLALLEMHLCF*DGTMFVGNFYS Trigger: GCTATAAAAATTTCCTACAAACATTGTTCCATCTCAAAAGCACAGATGCATTTCTAGTAATGCCAGAGTGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |
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CDS CAA 72 bp | ATCAAAGACATATTTGGTAAAAGATCAGGATTTCTGTaGATTTCATCCATCGAAAACGCCAATGCCAAAGCA | + |
Preference number: 6 (lower is better) Translates to: IKDIFGKRSGFL*ISSIENANAKA Trigger: TGCTTTGGCATTGGCGTTTTCGATGGATGAAATCAACAGAAATCCTGATCTTTTACCAAATATGTCTTTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164918.3 ENSMUST00000232927.2 |