Pregenerated sensors for VMN2R50 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094606Ensembl transcript IDs: ENSMUST00000074943.9, ENSMUST00000086298.14
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTTTGTTGAGACTGCTGATGTTTCTATGGGTTGCCCTCCTACTCTaGTTCTTGCAACTATTCCCAATTCTTCCACAGGGGCCCCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: GLLRLLMFLWVALLL*FLQLFPILPQGPLA Trigger: AGCCAGGGGCCCCTGTGGAAGAATTGGGAATAGTTGCAAGAAGCAGAGTAGGAGGGCAACCCATAGAAACATCAGCAGTCTCAACAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR GCA 90 bp | TCTTGTTTGTCCAGGTTTGTTGAGACTGCTGATGTTTCTATGGGTTaGCCTCCTACTCTGCTTCTTGCAACTATTCCCAATTCTTCCACA | + |
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Preference number: 1 (lower is better) Translates to: SCLSRFVETADVSMG*PPTLLLATIPNSST Trigger: TGTGGAAGAATTGGGAATAGTTGCAAGAAGCAGAGTAGGAGGGCAACCCATAGAAACATCAGCAGTCTCAACAAACCTGGACAAACAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR CAA 90 bp | TTGAGACTGCTGATGTTTCTATGGGTTGCCCTCCTACTCTGCTTCTaGCAACTATTCCCAATTCTTCCACAGGGGCCCCTGGCTTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: LRLLMFLWVALLLCF*QLFPILPQGPLASV Trigger: GACAGAAGCCAGGGGCCCCTGTGGAAGAATTGGGAATAGTTGCAAGAAGCAGAGTAGGAGGGCAACCCATAGAAACATCAGCAGTCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR-3UTR CCA 90 bp | GGGGACTTAATTCTGTCTAGGTTTAGGTGTGTCTCTCCCACTGATGCTAGACCACTGCTGATGTTTCTATaGGTTGCCCTCCTACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: GDLILSRFRCVSPTDARPLLMFL*VALLLC Trigger: GCAGAGTAGGAGGGCAACCCATAGAAACATCAGCAG...TGGTCTAGCATCAGTGGGAGAGACACACCTAAACCTAGACAGAATTAAGTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR-3UTR GCA 90 bp | ATATCCCTACATCCCCAATGCCCAGCAATTCCCAATCCCTGGGGACTTAATTCTGTTGCCCTCCTACTCTaGTTCTTGCAACTATTCCCA | + |
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Preference number: 2 (lower is better) Translates to: ISLHPQCPAIPNPWGLNSVALLL*FLQLFP Trigger: TGGGAATAGTTGCAAGAAGCAGAGTAGGAGGGCAAC...AGAATTAAGTCCCCAGGGATTGGGAATTGCTGGGCATTGGGGATGTAGGGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR CAA 90 bp | CTCTGGTTAGATGCTCAATGTCTGAGAGATCTTGTTTGTCCAGGTTaGTTGAGACTGCTGATGTTTCTATGGGTTGCCCTCCTACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: LWLDAQCLRDLVCPG*LRLLMFLWVALLLC Trigger: GCAGAGTAGGAGGGCAACCCATAGAAACATCAGCAGTCTCAACAAACCTGGACAAACAAGATCTCTCAGACATTGAGCATCTAACCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGACCTCAATTAGAACTGCACACAGAGGGCAATCTCTGAAAGAAATTAGGCCCCCATCTCCAAGATaGTATCCCTACATCCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: SRTSIRTAHRGQSLKEIRPPSPR*YPYIPN Trigger: ATTGGGGATGTAGGGATATCATCTTGGAGATGGGGG...CCTAATTTCTTTCAGAGATTGCCCTCTGTGTGCAGTTCTAATTGAGGTCCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTAGGTTTAGGTGTGTCTCTCCCACTGATGCTAGACCAGGCAGCCTTATGTCCTACTCTGCTTCTTaGAACTATTCCCAATTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LSRFRCVSPTDARPGSLMSYSAS*NYSQFF Trigger: GAAGAATTGGGAATAGTTGCAAGAAGCAGAGTAGGA...CATAAGGCTGCCTGGTCTAGCATCAGTGGGAGAGACACACCTAAACCTAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR-3UTR GCA 90 bp | TTAATTCTGTCTAGGTTTAGGTGTGTCTCTCCCACTGATGCTAGACCAGGCAGCGATGTTTCTATGGGTTaGCCTCCTACTCTGCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LILSRFRCVSPTDARPGSDVSMG*PPTLLL Trigger: AAGAAGCAGAGTAGGAGGGCAACCCATAGAAACATC...GCTGCCTGGTCTAGCATCAGTGGGAGAGACACACCTAAACCTAGACAGAATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR-3UTR GCA 90 bp | ATATCCCTACATCCCCAATGCCCAGCAATTCCCAATCCCTGGGGACTTAATTCTGATGTTTCTATGGGTTaGCCTCCTACTCTGCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: ISLHPQCPAIPNPWGLNSDVSMG*PPTLLL Trigger: AAGAAGCAGAGTAGGAGGGCAACCCATAGAAACATC...AGAATTAAGTCCCCAGGGATTGGGAATTGCTGGGCATTGGGGATGTAGGGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR-3UTR GCA 90 bp | TCCAGGACCTCAATTAGAACTGCACACAGAGGGCAATCTCTGAAAGAAATTAGGCAGGCAGCCTTATGCTaGATATTTGTTGGGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: SRTSIRTAHRGQSLKEIRQAALC*IFVGGF Trigger: GAAGCCCCCAACAAATATGCAGCATAAGGCTGCCTG...CCTAATTTCTTTCAGAGATTGCCCTCTGTGTGCAGTTCTAATTGAGGTCCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR CAA 90 bp | TGGTTAGATGCTCAATGTCTGAGAGATCTTGTTTGTCCAGGTTTGTaGAGACTGCTGATGTTTCTATGGGTTGCCCTCCTACTCTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: WLDAQCLRDLVCPGL*RLLMFLWVALLLCF Trigger: GAAGCAGAGTAGGAGGGCAACCCATAGAAACATCAGCAGTCTCAACAAACCTGGACAAACAAGATCTCTCAGACATTGAGCATCTAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR-3UTR TCA 90 bp | TTAATTCTGTCTAGGTTTAGGTGTGTCTCTCCCACTGATGCTAGACCAGGCAGCAATGAAGCAAGTGAATaGGTGCAAGATTTGTGGACT | + |
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Preference number: 2 (lower is better) Translates to: LILSRFRCVSPTDARPGSNEASE*VQDLWT Trigger: AGTCCACAAATCTTGCACTCATTCACTTGCTTCATT...GCTGCCTGGTCTAGCATCAGTGGGAGAGACACACCTAAACCTAGACAGAATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR-3UTR CCA 90 bp | CCCCATCTCCAAGATGATATCCCTACATCCCCAATGCCCAGCAATTCCCAATCCTGTGTGTGCTCCTACTaGAAATCAGAAAATAATTTC | + |
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Preference number: 2 (lower is better) Translates to: PHLQDDIPTSPMPSNSQSCVCSY*KSENNF Trigger: GAAATTATTTTCTGATTTCCAGTAGGAGCACACACA...GGATTGGGAATTGCTGGGCATTGGGGATGTAGGGATATCATCTTGGAGATGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGACCTCAATTAGAACTGCACACAGAGGGCAATCTCTGAAAGAAATTAGGAATGAAGCAAGTGAATaGGTGCAAGATTTGTGGACT | + |
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Preference number: 2 (lower is better) Translates to: SRTSIRTAHRGQSLKEIRNEASE*VQDLWT Trigger: AGTCCACAAATCTTGCACTCATTCACTTGCTTCATT...CCTAATTTCTTTCAGAGATTGCCCTCTGTGTGCAGTTCTAATTGAGGTCCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGACCTCAATTAGAACTGCACACAGAGGGCAATCTCTGAAAGAAATTAGGTGTGTGTGCTCCTACTaGAAATCAGAAAATAATTTC | + |
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Preference number: 2 (lower is better) Translates to: SRTSIRTAHRGQSLKEIRCVCSY*KSENNF Trigger: GAAATTATTTTCTGATTTCCAGTAGGAGCACACACA...CCTAATTTCTTTCAGAGATTGCCCTCTGTGTGCAGTTCTAATTGAGGTCCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR GCA 72 bp | AGACTGCTGATGTTTCTATGGGTTGCCCTCCTACTCTaGTTCTTGCAACTATTCCCAATTCTTCCACAGGGG | + |
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Preference number: 3 (lower is better) Translates to: RLLMFLWVALLL*FLQLFPILPQG Trigger: CCCCTGTGGAAGAATTGGGAATAGTTGCAAGAAGCAGAGTAGGAGGGCAACCCATAGAAACATCAGCAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR CCA 72 bp | GATGCTAGACCAGGCAGCCTTATGCTGCATATTTGTTaGGGGCTTCACATCAGCTGTATGATCTCATTCACA | + |
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Preference number: 3 (lower is better) Translates to: DARPGSLMLHIC*GLHISCMISFT Trigger: TGTGAATGAGATCATACAGCTGATGTGAAGCCCCCAACAAATATGCAGCATAAGGCTGCCTGGTCTAGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR-3UTR CAA 90 bp | GGGGACTTAATTCTGTCTAGGTTTAGGTGTGTCTCTCCCACTGATGCTAGACCACTTGTTTGTCCAGGTTaGTTGAGACTGCTGATGTTT | + |
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Preference number: 3 (lower is better) Translates to: GDLILSRFRCVSPTDARPLVCPG*LRLLMF Trigger: AAACATCAGCAGTCTCAACAAACCTGGACAAACAAG...TGGTCTAGCATCAGTGGGAGAGACACACCTAAACCTAGACAGAATTAAGTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR GCA 72 bp | TCCAGGTTTGTTGAGACTGCTGATGTTTCTATGGGTTaGCCTCCTACTCTGCTTCTTGCAACTATTCCCAAT | + |
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Preference number: 3 (lower is better) Translates to: SRFVETADVSMG*PPTLLLATIPN Trigger: ATTGGGAATAGTTGCAAGAAGCAGAGTAGGAGGGCAACCCATAGAAACATCAGCAGTCTCAACAAACCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR CCA 72 bp | GTTTGTCCAGGTTTGTTGAGACTGCTGATGTTTCTATaGGTTGCCCTCCTACTCTGCTTCTTGCAACTATTC | + |
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Preference number: 3 (lower is better) Translates to: VCPGLLRLLMFL*VALLLCFLQLF Trigger: GAATAGTTGCAAGAAGCAGAGTAGGAGGGCAACCCATAGAAACATCAGCAGTCTCAACAAACCTGGACAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR CCA 72 bp | CAGCTGTATGATCTCATTCACATAGTCTATGAACTCTaGTTAGATGCTCAATGTCTGAGAGATCTTGTTTGT | + |
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Preference number: 3 (lower is better) Translates to: QLYDLIHIVYEL*LDAQCLRDLVC Trigger: ACAAACAAGATCTCTCAGACATTGAGCATCTAACCAGAGTTCATAGACTATGTGAATGAGATCATACAGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR TCA 72 bp | GAGTTTAATTCTGTGAGAGGAAATGAAGCAAGTGAATaGGTGCAAGATTTGTGGACTCTATACAGAAGTTCA | + |
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Preference number: 3 (lower is better) Translates to: EFNSVRGNEASE*VQDLWTLYRSS Trigger: TGAACTTCTGTATAGAGTCCACAAATCTTGCACTCATTCACTTGCTTCATTTCCTCTCACAGAATTAAACTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR GCA 90 bp | TCTGCTTCTTGCAACTATTCCCAATTCTTCCACAGGGGCCCCTGGCTTCTGTCCGACTACATTCTGCACTaGACACAGAGGATGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: SASCNYSQFFHRGPWLLSDYILH*TQRMAS Trigger: AGATGCCATCCTCTGTGTGCAGTGCAGAATGTAGTC...GGACAGAAGCCAGGGGCCCCTGTGGAAGAATTGGGAATAGTTGCAAGAAGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR GCA 90 bp | CCCCATCTCCAAGATGATATCCCTACATCCCCAATGCCCAGCAATTCCCAATCCTCCAGGACTACATTCTaGACTGCACACAGAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: PHLQDDIPTSPMPSNSQSSRTTF*TAHRGW Trigger: CCATCCTCTGTGTGCAGTGCAGAATGTAGTCCTGGA...GGATTGGGAATTGCTGGGCATTGGGGATGTAGGGATATCATCTTGGAGATGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR GCA 90 bp | CTGTCTAGGTTTAGGTGTGTCTCTCCCACTGATGCTAGACCAGGCAGCCTTATGTCCAGGACTACATTCTaGACTGCACACAGAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: LSRFRCVSPTDARPGSLMSRTTF*TAHRGW Trigger: CCATCCTCTGTGTGCAGTGCAGAATGTAGTCCTGGA...CATAAGGCTGCCTGGTCTAGCATCAGTGGGAGAGACACACCTAAACCTAGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR CAA 72 bp | CTGATGTTTCTATGGGTTGCCCTCCTACTCTGCTTCTaGCAACTATTCCCAATTCTTCCACAGGGGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LMFLWVALLLCF*QLFPILPQGPL Trigger: CAGGGGCCCCTGTGGAAGAATTGGGAATAGTTGCAAGAAGCAGAGTAGGAGGGCAACCCATAGAAACATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR TCA 90 bp | CTGTCTAGGTTTAGGTGTGTCTCTCCCACTGATGCTAGACCAGGCAGCCTTATGAAGCAAGAACCACAGTaGCTGTTTTCGCCAGAACTG | + |
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Preference number: 4 (lower is better) Translates to: LSRFRCVSPTDARPGSLMKQEPQ*LFSPEL Trigger: CAGTTCTGGCGAAAACAGTCACTGTGGTTCTTGCTT...CATAAGGCTGCCTGGTCTAGCATCAGTGGGAGAGACACACCTAAACCTAGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR GCA 90 bp | ATATCCCTACATCCCCAATGCCCAGCAATTCCCAATCCCTGGGGACTTAATTCTAGTGAAGCTTCCAAGTaGCAGGCAGGCCAAGTATCC | + |
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Preference number: 4 (lower is better) Translates to: ISLHPQCPAIPNPWGLNSSEASK*QAGQVS Trigger: GGATACTTGGCCTGCCTGGCACTTGGAAGCTTCACT...AGAATTAAGTCCCCAGGGATTGGGAATTGCTGGGCATTGGGGATGTAGGGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR TCA 90 bp | ATATCCCTACATCCCCAATGCCCAGCAATTCCCAATCCCTGGGGACTTAATTCTAAGCAAGAACCACAGTaGCTGTTTTCGCCAGAACTG | + |
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Preference number: 4 (lower is better) Translates to: ISLHPQCPAIPNPWGLNSKQEPQ*LFSPEL Trigger: CAGTTCTGGCGAAAACAGTCACTGTGGTTCTTGCTT...AGAATTAAGTCCCCAGGGATTGGGAATTGCTGGGCATTGGGGATGTAGGGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR GCA 90 bp | TCTGCTTCTTGCAACTATTCCCAATTCTTCCACAGGGGCCCCTGGCTTCTGTCCGTGATCCATAGAATGTaGCATGAGTTATGTCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: SASCNYSQFFHRGPWLLSVIHRM*HELCLS Trigger: AGAGAGACATAACTCATGGCACATTCTATGGATCAC...GGACAGAAGCCAGGGGCCCCTGTGGAAGAATTGGGAATAGTTGCAAGAAGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR GCA 90 bp | CCTGACTCTTCCACATCTAACATCTCCTCCCCCATCTCCAAGATGATATCCCTATACCAGAGCTGTGAATaGAGAGAAACAGAAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: PDSSTSNISSPISKMISLYQSCE*RETEGH Trigger: ATGGCCTTCTGTTTCTCTGCATTCACAGCTCTGGTA...TAGGGATATCATCTTGGAGATGGGGGAGGAGATGTTAGATGTGGAAGAGTCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR GCA 90 bp | GGGGACTTAATTCTGTCTAGGTTTAGGTGTGTCTCTCCCACTGATGCTAGACCATACCAGAGCTGTGAATaGAGAGAAACAGAAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: GDLILSRFRCVSPTDARPYQSCE*RETEGH Trigger: ATGGCCTTCTGTTTCTCTGCATTCACAGCTCTGGTA...TGGTCTAGCATCAGTGGGAGAGACACACCTAAACCTAGACAGAATTAAGTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR TCA 90 bp | CTGTCTAGGTTTAGGTGTGTCTCTCCCACTGATGCTAGACCAGGCAGCCTTATGTCCATTGCTTTGTGGTaGTCCATATTCTCTGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: LSRFRCVSPTDARPGSLMSIALW*SIFSVK Trigger: TTTTACAGAGAATATGGATCACCACAAAGCAATGGA...CATAAGGCTGCCTGGTCTAGCATCAGTGGGAGAGACACACCTAAACCTAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR TCA 90 bp | ATATCCCTACATCCCCAATGCCCAGCAATTCCCAATCCCTGGGGACTTAATTCTGCAATAATATGTAGCTaGGGCTTCTGTTATTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: ISLHPQCPAIPNPWGLNSAIICS*GFCYWP Trigger: AGGCCAATAACAGAAGCCTCAGCTACATATTATTGC...AGAATTAAGTCCCCAGGGATTGGGAATTGCTGGGCATTGGGGATGTAGGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR TCA 90 bp | TTAATTCTGTCTAGGTTTAGGTGTGTCTCTCCCACTGATGCTAGACCAGGCAGCAGAACACTAGTATGCTaGAGGTCAAGAACTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LILSRFRCVSPTDARPGSRTLVC*RSRTWL Trigger: AAGCCAAGTTCTTGACCTTCAGCATACTAGTGTTCT...GCTGCCTGGTCTAGCATCAGTGGGAGAGACACACCTAAACCTAGACAGAATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR GCA 90 bp | CCCCATCTCCAAGATGATATCCCTACATCCCCAATGCCCAGCAATTCCCAATCCGTAGGGAAATTCCATTaGTTTGTGGTGATCCATATT | + |
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Preference number: 4 (lower is better) Translates to: PHLQDDIPTSPMPSNSQSVGKFH*FVVIHI Trigger: AATATGGATCACCACAAAGCAATGGAATTTCCCTAC...GGATTGGGAATTGCTGGGCATTGGGGATGTAGGGATATCATCTTGGAGATGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR CCA 90 bp | TCTGCTTCTTGCAACTATTCCCAATTCTTCCACAGGGGCCCCTGGCTTCTGTCCATTGGCCATGAAAAGTaGAATGTTAAGGAAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: SASCNYSQFFHRGPWLLSIGHEK*NVKEEE Trigger: TTCTTCTTCCTTAACATTCCACTTTTCATGGCCAAT...GGACAGAAGCCAGGGGCCCCTGTGGAAGAATTGGGAATAGTTGCAAGAAGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR CAA 72 bp | GCTCAATGTCTGAGAGATCTTGTTTGTCCAGGTTTGTaGAGACTGCTGATGTTTCTATGGGTTGCCCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: AQCLRDLVCPGL*RLLMFLWVALL Trigger: TAGGAGGGCAACCCATAGAAACATCAGCAGTCTCAACAAACCTGGACAAACAAGATCTCTCAGACATTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR CAA 72 bp | GATGCTCAATGTCTGAGAGATCTTGTTTGTCCAGGTTaGTTGAGACTGCTGATGTTTCTATGGGTTGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: DAQCLRDLVCPG*LRLLMFLWVAL Trigger: GAGGGCAACCCATAGAAACATCAGCAGTCTCAACAAACCTGGACAAACAAGATCTCTCAGACATTGAGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR TCA 90 bp | TCCAGGACCTCAATTAGAACTGCACACAGAGGGCAATCTCTGAAAGAAATTAGGGTAGTTGGGTGTGCCTaGTACAAGGAATTGTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: SRTSIRTAHRGQSLKEIRVVGCA*YKELSQ Trigger: TTGAGACAATTCCTTGTATCAGGCACACCCAACTAC...CCTAATTTCTTTCAGAGATTGCCCTCTGTGTGCAGTTCTAATTGAGGTCCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR GCA 90 bp | GGGGACTTAATTCTGTCTAGGTTTAGGTGTGTCTCTCCCACTGATGCTAGACCAATAGGAGTGTCATGGTaGTTCACAAAGACACAAAGT | + |
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Preference number: 4 (lower is better) Translates to: GDLILSRFRCVSPTDARPIGVSW*FTKTQS Trigger: ACTTTGTGTCTTTGTGAAGCACCATGACACTCCTAT...TGGTCTAGCATCAGTGGGAGAGACACACCTAAACCTAGACAGAATTAAGTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR GCA 90 bp | CCTGACTCTTCCACATCTAACATCTCCTCCCCCATCTCCAAGATGATATCCCTAATAGGAGTGTCATGGTaGTTCACAAAGACACAAAGT | + |
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Preference number: 4 (lower is better) Translates to: PDSSTSNISSPISKMISLIGVSW*FTKTQS Trigger: ACTTTGTGTCTTTGTGAAGCACCATGACACTCCTAT...TAGGGATATCATCTTGGAGATGGGGGAGGAGATGTTAGATGTGGAAGAGTCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR TCA 90 bp | TCCAGGACCTCAATTAGAACTGCACACAGAGGGCAATCTCTGAAAGAAATTAGGGCAATAATATGTAGCTaGGGCTTCTGTTATTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SRTSIRTAHRGQSLKEIRAIICS*GFCYWP Trigger: AGGCCAATAACAGAAGCCTCAGCTACATATTATTGC...CCTAATTTCTTTCAGAGATTGCCCTCTGTGTGCAGTTCTAATTGAGGTCCTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR TCA 90 bp | TCCAGGACCTCAATTAGAACTGCACACAGAGGGCAATCTCTGAAAGAAATTAGGAGAACACTAGTATGCTaGAGGTCAAGAACTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SRTSIRTAHRGQSLKEIRRTLVC*RSRTWL Trigger: AAGCCAAGTTCTTGACCTTCAGCATACTAGTGTTCT...CCTAATTTCTTTCAGAGATTGCCCTCTGTGTGCAGTTCTAATTGAGGTCCTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR GCA 90 bp | GGGGACTTAATTCTGTCTAGGTTTAGGTGTGTCTCTCCCACTGATGCTAGACCAGTAGGGAAATTCCATTaGTTTGTGGTGATCCATATT | + |
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Preference number: 4 (lower is better) Translates to: GDLILSRFRCVSPTDARPVGKFH*FVVIHI Trigger: AATATGGATCACCACAAAGCAATGGAATTTCCCTAC...TGGTCTAGCATCAGTGGGAGAGACACACCTAAACCTAGACAGAATTAAGTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR GCA 90 bp | GAGACTGCTGATGTTTCTATGGGTTGCCCTCCTACTCTGCTTCTTGCAACTATTGTGATCCATAGAATGTaGCATGAGTTATGTCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: ETADVSMGCPPTLLLATIVIHRM*HELCLS Trigger: AGAGAGACATAACTCATGGCACATTCTATGGATCAC...AATAGTTGCAAGAAGCAGAGTAGGAGGGCAACCCATAGAAACATCAGCAGTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR GCA 90 bp | TCCAGGACCTCAATTAGAACTGCACACAGAGGGCAATCTCTGAAAGAAATTAGGTTTCCCATTGTCTACTaGCTGATTATCAACCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SRTSIRTAHRGQSLKEIRFPIVY*LIINLL Trigger: CAGCAGGTTGATAATCAGGCAGTAGACAATGGGAAA...CCTAATTTCTTTCAGAGATTGCCCTCTGTGTGCAGTTCTAATTGAGGTCCTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR GCA 90 bp | TACAGAAGTTCAGTAGATATGATACTTCATGACATCACTAGAGCAACCAGTGAGGACTACATTCTGCACTaGACACAGAGGATGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: YRSSVDMILHDITRATSEDYILH*TQRMAS Trigger: AGATGCCATCCTCTGTGTGCAGTGCAGAATGTAGTC...CTCACTGGTTGCTCTAGTGATGTCATGAAGTATCATATCTACTGAACTTCTGTA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR CCA 90 bp | CCTGACTCTTCCACATCTAACATCTCCTCCCCCATCTCCAAGATGATATCCCTAAGAGTATTAGTGAAGTaGATCTTTCTAAGAAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PDSSTSNISSPISKMISLRVLVK*IFLRKE Trigger: CTCCTTTCTTAGAAAGATCCACTTCACTAATACTCT...TAGGGATATCATCTTGGAGATGGGGGAGGAGATGTTAGATGTGGAAGAGTCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| 3UTR CAA 72 bp | ACTCTGGTTAGATGCTCAATGTCTGAGAGATCTTGTTaGTCCAGGTTTGTTGAGACTGCTGATGTTTCTATG | + |
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Preference number: 4 (lower is better) Translates to: TLVRCSMSERSC*SRFVETADVSM Trigger: CATAGAAACATCAGCAGTCTCAACAAACCTGGACAAACAAGATCTCTCAGACATTGAGCATCTAACCAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR TCA 90 bp | TACAGAAGTTCAGTAGATATGATACTTCATGACATCACTAGAGCAACCAGTGAGGTAGTTGGGTGTGCCTaGTACAAGGAATTGTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: YRSSVDMILHDITRATSEVVGCA*YKELSQ Trigger: TTGAGACAATTCCTTGTATCAGGCACACCCAACTAC...CTCACTGGTTGCTCTAGTGATGTCATGAAGTATCATATCTACTGAACTTCTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR CCA 90 bp | TTGTACTTGACAGCAGAAAAGGAACACTTCCTCCTTAGACAATTGGCCAATCGCATTGGCCATGAAAAGTaGAATGTTAAGGAAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: LYLTAEKEHFLLRQLANRIGHEK*NVKEEE Trigger: TTCTTCTTCCTTAACATTCCACTTTTCATGGCCAAT...GCGATTGGCCAATTGTCTAAGGAGGAAGTGTTCCTTTTCTGCTGTCAAGTACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR CCA 90 bp | TCCAGGACCTCAATTAGAACTGCACACAGAGGGCAATCTCTGAAAGAAATTAGGAGAGTATTAGTGAAGTaGATCTTTCTAAGAAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SRTSIRTAHRGQSLKEIRRVLVK*IFLRKE Trigger: CTCCTTTCTTAGAAAGATCCACTTCACTAATACTCT...CCTAATTTCTTTCAGAGATTGCCCTCTGTGTGCAGTTCTAATTGAGGTCCTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS GCA 90 bp | TGCCATTCCCTCCTTCCACAATCTTCTGAATCCAGGACTACATTCTaGACTGCACACAGAGGATGGCATCTTTCTACTTCCTGTGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: CHSLLPQSSESRTTF*TAHRGWHLSTSCGH Trigger: GTGGCCACAGGAAGTAGAAAGATGCCATCCTCTGTGTGCAGTGCAGAATGTAGTCCTGGATTCAGAAGATTGTGGAAGGAGGGAATGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS GCA 90 bp | GTCAGGCAGATTCTTGGCCAAGAAAGCCAAAGTGAAGCTTCCAAGTaGCAGGCAGGCCAAGTATCCAAGAACACAGTAGAATGCAGTAAC | + |
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Preference number: 5 (lower is better) Translates to: VRQILGQESQSEASK*QAGQVSKNTVECSN Trigger: GTTACTGCATTCTACTGTGTTCTTGGATACTTGGCCTGCCTGGCACTTGGAAGCTTCACTTTGGCTTTCTTGGCCAAGAATCTGCCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR CAA 90 bp | GAGACTGCTGATGTTTCTATGGGTTGCCCTCCTACTCTGCTTCTTGCAACTATTCCTGGGTCTGTGACTTaGAAAGCAAGAACCACAGTG | + |
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Preference number: 5 (lower is better) Translates to: ETADVSMGCPPTLLLATIPGSVT*KARTTV Trigger: CACTGTGGTTCTTGCTTTCAAAGTCACAGACCCAGG...AATAGTTGCAAGAAGCAGAGTAGGAGGGCAACCCATAGAAACATCAGCAGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR CAA 90 bp | TCCAGGACCTCAATTAGAACTGCACACAGAGGGCAATCTCTGAAAGAAATTAGGCCTGGGTCTGTGACTTaGAAAGCAAGAACCACAGTG | + |
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Preference number: 5 (lower is better) Translates to: SRTSIRTAHRGQSLKEIRPGSVT*KARTTV Trigger: CACTGTGGTTCTTGCTTTCAAAGTCACAGACCCAGG...CCTAATTTCTTTCAGAGATTGCCCTCTGTGTGCAGTTCTAATTGAGGTCCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS GCA 90 bp | GTTTACCTTCAAGCAGTGAGAACTGGCTCCTTTCCCATTGTCTACTaGCTGATTATCAACCTGCTGCAAATTCATCTCATGGAGTGCATG | + |
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Preference number: 5 (lower is better) Translates to: VYLQAVRTGSFPIVY*LIINLLQIHLMECM Trigger: CATGCACTCCATGAGATGAATTTGCAGCAGGTTGATAATCAGGCAGTAGACAATGGGAAAGGAGCCAGTTCTCACTGCTTGAAGGTAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR CAA 90 bp | ATATCCCTACATCCCCAATGCCCAGCAATTCCCAATCCCTGGGGACTTAATTCTCTGGGATCAATGAAATaGGCCATGAAAAGTGGAATG | + |
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Preference number: 5 (lower is better) Translates to: ISLHPQCPAIPNPWGLNSLGSMK*AMKSGM Trigger: CATTCCACTTTTCATGGCCAATTTCATTGATCCCAG...AGAATTAAGTCCCCAGGGATTGGGAATTGCTGGGCATTGGGGATGTAGGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR CAA 90 bp | GAGACTGCTGATGTTTCTATGGGTTGCCCTCCTACTCTGCTTCTTGCAACTATTAAAGATACCTCCCAATaGGGTCCTCTAAGCAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: ETADVSMGCPPTLLLATIKDTSQ*GPLSRN Trigger: GTTTCTGCTTAGAGGACCCAATTGGGAGGTATCTTT...AATAGTTGCAAGAAGCAGAGTAGGAGGGCAACCCATAGAAACATCAGCAGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074943.9 |
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| CDS GCA 90 bp | GTCTACTGCCTGATTATCAACCTGCTGCAAATTCATCTCATGGAGTaGATGGGCTACGGCATACACAGCATTGTATATGTTATGACTACT | + |
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Preference number: 5 (lower is better) Translates to: VYCLIINLLQIHLME*MGYGIHSIVYVMTT Trigger: AGTAGTCATAACATATACAATGCTGTGTATGCCGTAGCCCATGCACTCCATGAGATGAATTTGCAGCAGGTTGATAATCAGGCAGTAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS-3UTR CAA 90 bp | TCCAGGACCTCAATTAGAACTGCACACAGAGGGCAATCTCTGAAAGAAATTAGGCTGGGATCAATGAAATaGGCCATGAAAAGTGGAATG | + |
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Preference number: 5 (lower is better) Translates to: SRTSIRTAHRGQSLKEIRLGSMK*AMKSGM Trigger: CATTCCACTTTTCATGGCCAATTTCATTGATCCCAG...CCTAATTTCTTTCAGAGATTGCCCTCTGTGTGCAGTTCTAATTGAGGTCCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS TCA 90 bp | TCATGGAGTGCATGGGCTACGGCATACACAGCATTGTATATGTTATaGCTACTCTCACTAAAGGCCATGTCAAATTTCTGTTCCATTAGC | + |
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Preference number: 5 (lower is better) Translates to: SWSAWATAYTALYML*LLSLKAMSNFCSIS Trigger: GCTAATGGAACAGAAATTTGACATGGCCTTTAGTGAGAGTAGTCATAACATATACAATGCTGTGTATGCCGTAGCCCATGCACTCCATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS TCA 90 bp | TTCTGTTCTGTGTTGGCATATTGGTATTCTGGACAATTCACACATTaGTCCATATTTGTCTCATTAGAAATTTCATTTTCAGGGCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: FCSVLAYWYSGQFTH*SIFVSLEISFSGQG Trigger: CCCCTGCCCTGAAAATGAAATTTCTAATGAGACAAATATGGATCAATGTGTGAATTGTCCAGAATACCAATATGCCAACACAGAACAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS CCA 72 bp | GAATCCAGGACTACATTCTGCACTGCACACAGAGGATaGCATCTTTCTACTTCCTGTGGCCACCTCAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: ESRTTFCTAHRG*HLSTSCGHLKH Trigger: ATGCTTGAGGTGGCCACAGGAAGTAGAAAGATGCCATCCTCTGTGTGCAGTGCAGAATGTAGTCCTGGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS TCA 72 bp | GGCCAAGTATCCAAGAACACAGTAGAATGCAGTAACTaGGCCCTTGTTGCACACAATGATGATGTGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: GQVSKNTVECSN*ALVAHNDDVAM Trigger: CATGGCCACATCATCATTGTGTGCAACAAGGGCTCAGTTACTGCATTCTACTGTGTTCTTGGATACTTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS TCA 72 bp | GAGCCCTTGTTGCACACAATGATGATGTGGCCATGCTaGGAGTGTTCATCAATATCAACAAAGGGAGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: EPLLHTMMMWPC*ECSSISTKGGE Trigger: TTCTCCTCCCTTTGTTGATATTGATGAACACTCTCAGCATGGCCACATCATCATTGTGTGCAACAAGGGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS TCA 72 bp | CATGGTGCTTCACAAAGACACAAAGTACCAGAGCTGTaGATGCAGAGAAACAGAAGGCCATTAAGGCAAGTA | + |
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Preference number: 6 (lower is better) Translates to: HGASQRHKVPEL*MQRNRRPLRQV Trigger: TACTTGCCTTAATGGCCTTCTGTTTCTCTGCATTCACAGCTCTGGTACTTTGTGTCTTTGTGAAGCACCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS CAA 72 bp | TGTGTCCTTTGGGGCCATCTGATAGAGATAGGGATATaGTTCATCATCACTGAAGGTAGAATGGAAAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: CVLWGHLIEIGI*FIITEGRMERS Trigger: GGACCTTTCCATTCTACCTTCAGTGATGATGAACAATATCCCTATCTCTATCAGATGGCCCCAAAGGACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS GCA 72 bp | CTGATTATCAACCTGCTGCAAATTCATCTCATGGAGTaGATGGGCTACGGCATACACAGCATTGTATATGTT | + |
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Preference number: 6 (lower is better) Translates to: LIINLLQIHLME*MGYGIHSIVYV Trigger: AACATATACAATGCTGTGTATGCCGTAGCCCATGCACTCCATGAGATGAATTTGCAGCAGGTTGATAATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS CAA 72 bp | TCCAGGAAGTTCCAGAAACTTAAAGATACCTCCCAATaGGGTCCTCTAAGCAGAAACGAACACATACTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SRKFQKLKDTSQ*GPLSRNEHILS Trigger: AGAGAGTATGTGTTCGTTTCTGCTTAGAGGACCCAATTGGGAGGTATCTTTAAGTTTCTGGAACTTCCTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074943.9 |
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| CDS CAA 90 bp | AAGAAGCTGTCCAGGAAGTTCCAGAAACTTAAAGATACCTCCCAATaGGGTCCTCTAAGCAGAAACGAACACATACTCTCTTCATTACAG | + |
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Preference number: 6 (lower is better) Translates to: KKLSRKFQKLKDTSQ*GPLSRNEHILSSLQ Trigger: CTGTAATGAAGAGAGTATGTGTTCGTTTCTGCTTAGAGGACCCAATTGGGAGGTATCTTTAAGTTTCTGGAACTTCCTGGACAGCTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074943.9 |
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| CDS TCA 72 bp | GCATGGGCTACGGCATACACAGCATTGTATATGTTATaGCTACTCTCACTAAAGGCCATGTCAAATTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: AWATAYTALYML*LLSLKAMSNFC Trigger: ACAGAAATTTGACATGGCCTTTAGTGAGAGTAGTCATAACATATACAATGCTGTGTATGCCGTAGCCCATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS CAA 72 bp | CAATATCAACAAAGGGAGGAGAAACTGCTAGCCAGATaGCACACAGAACACATTGAAATAGGGAACATATGG | + |
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Preference number: 6 (lower is better) Translates to: QYQQREEKLLAR*HTEHIEIGNIW Trigger: CCATATGTTCCCTATTTCAATGTGTTCTGTGTGCAATCTGGCTAGCAGTTTCTCCTCCCTTTGTTGATATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS CAA 72 bp | TGTTCCATTAGCCAATCAAATGAGGCATTGGATGAATaGCTCTTCAGCATTTTACAGTTAGATGCTGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: CSISQSNEALDE*LFSILQLDAED Trigger: ATCCTCAGCATCTAACTGTAAAATGCTGAAGAGCAATTCATCCAATGCCTCATTTGATTGGCTAATGGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS CCA 72 bp | TTCATAATCACTTTGTCCCCAAGAGTATTAGTGAAGTaGATCTTTCTAAGAAAGGAGTTTACCTTCAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: FIITLSPRVLVK*IFLRKEFTFKQ Trigger: CTGCTTGAAGGTAAACTCCTTTCTTAGAAAGATCCACTTCACTAATACTCTTGGGGACAAAGTGATTATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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| CDS CAA 72 bp | TCAAATTTCTGTTCCATTAGCCAATCAAATGAGGCATaGGATGAATTGCTCTTCAGCATTTTACAGTTAGAT | + |
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Preference number: 6 (lower is better) Translates to: SNFCSISQSNEA*DELLFSILQLD Trigger: ATCTAACTGTAAAATGCTGAAGAGCAATTCATCCAATGCCTCATTTGATTGGCTAATGGAACAGAAATTTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074943.9 ENSMUST00000086298.14 |
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