Pregenerated sensors for VMN2R5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068999Ensembl transcript IDs: ENSMUST00000170270.3, ENSMUST00000177184.9
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGCAACCCCGCCCCCACTTCCTGGTCTTGGCATTCCTCTACCATaGGACATCAAGGCTTCACAGAACAAAGAGCCTCTCCTCCCATTG | + |
|
Preference number: 1 (lower is better) Translates to: PATPPPLPGLGIPLP*DIKASQNKEPLLPL Trigger: CAATGGGAGGAGAGGCTCTTTGTTCTGTGAAGCCTTGATGTCCCATGGTAGAGGAATGCCAAGACCAGGAAGTGGGGGCGGGGTTGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR TCA 90 bp | AGGAGTGGTATTGCTGGGTCCTCAGGTAGTATATGGCCAAATTTCTaGGGAACTGTTAAACTGATTTCCAGAATGGTTATACCAGCTTGC | + |
|
Preference number: 1 (lower is better) Translates to: RSGIAGSSGSIWPNF*GTVKLISRMVIPAC Trigger: GCAAGCTGGTATAACCATTCTGGAAATCAGTTTAACAGTTCCTCAGAAATTTGGCCATATACTACCTGAGGACCCAGCAATACCACTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR TCA 90 bp | GGTCCTCAGGTAGTATATGGCCAAATTTCTGAGGAACTGTTAAACTaGTTTCCAGAATGGTTATACCAGCTTGCAATCTCACCAGCAATG | + |
|
Preference number: 1 (lower is better) Translates to: GPQVVYGQISEELLN*FPEWLYQLAISPAM Trigger: CATTGCTGGTGAGATTGCAAGCTGGTATAACCATTCTGGAAATCAGTTTAACAGTTCCTCAGAAATTTGGCCATATACTACCTGAGGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR GCA 90 bp | GCCATTCTGACTGGTATGACGTGGAATCTCAGAGTTATTTTGACTTaGATTTCTCTGATGACTAAGGATGTTGGACATTTCTTTAGGTGT | + |
|
Preference number: 1 (lower is better) Translates to: AILTGMTWNLRVILT*ISLMTKDVGHFFRC Trigger: ACACCTAAAGAAATGTCCAACATCCTTAGTCATCAGAGAAATGCAAGTCAAAATAACTCTGAGATTCCACGTCATACCAGTCAGAATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR-3UTR CCA 90 bp | GGCATTCCTCTACCATGGGACATCAAGGCTTCACAGAACAAAGAGCCTCTCCTCATATATGCAGAGGAGTaGTATTGCTGGGTCCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: GIPLPWDIKASQNKEPLLIYAEE*YCWVLR Trigger: CCTGAGGACCCAGCAATACCACTCCTCTGCATATAT...GAGGAGAGGCTCTTTGTTCTGTGAAGCCTTGATGTCCCATGGTAGAGGAATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR-3UTR CCA 90 bp | GGCATTCCTCTACCATGGGACATCAAGGCTTCACAGAACAAAGAGCCTCTCCTCGTGTGTCTCACCACTTaGTATTCCTCAGTTGAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: GIPLPWDIKASQNKEPLLVCLTT*YSSVEN Trigger: ATTCTCAACTGAGGAATACCAAGTGGTGAGACACAC...GAGGAGAGGCTCTTTGTTCTGTGAAGCCTTGATGTCCCATGGTAGAGGAATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR-3UTR TCA 90 bp | GGCATTCCTCTACCATGGGACATCAAGGCTTCACAGAACAAAGAGCCTCTCCTCCAGAGTCTAACTTGTTaGGTACTTTGTATGAATTGG | + |
|
Preference number: 2 (lower is better) Translates to: GIPLPWDIKASQNKEPLLQSLTC*VLCMNW Trigger: CCAATTCATACAAAGTACTCAACAAGTTAGACTCTG...GAGGAGAGGCTCTTTGTTCTGTGAAGCCTTGATGTCCCATGGTAGAGGAATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR-3UTR GCA 90 bp | GGCATTCCTCTACCATGGGACATCAAGGCTTCACAGAACAAAGAGCCTCTCCTCATTGACACTGTCCTTTaGCTTAAAATTGCTTTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: GIPLPWDIKASQNKEPLLIDTVL*LKIALQ Trigger: TTGCAAAGCAATTTTAAGGCAAAGGACAGTGTCAAT...GAGGAGAGGCTCTTTGTTCTGTGAAGCCTTGATGTCCCATGGTAGAGGAATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CAA 90 bp | TTACAAGGTCTCACTTGTCAATTCTTGATCTTAGAGCATAAGCTATaGGTGTTCTGTCAGGAAATTTCCCCCTGTGCCAATGTGCTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: LQGLTCQFLILEHKL*VFCQEISPCANVLK Trigger: CTTAAGCACATTGGCACAGGGGGAAATTTCCTGACAGAACACCAATAGCTTATGCTCTAAGATCAAGAATTGACAAGTGAGACCTTGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCTAATATACACATATCAATGAGCACATACCACGGGTGTTCTTTCGTGATTGGATATCATCTAAGGTaGCATCCTTGCATGTCACAT | + |
|
Preference number: 2 (lower is better) Translates to: WANIHISMSTYHGCSFVIGYHLR*HPCMSH Trigger: ATGTGACATGCAAGGATGTCACCTTAGATGATATCC...AATCACGAAAGAACACCCGTGGTATGTGCTCATTGATATGTGTATATTAGCCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR-3UTR GCA 90 bp | TCCTTCTTCTTGAGCTTCATGTGGCCTGTGAATTGTATCATGGGTATTACAAAAATGGTTATACCAGCTTaGAATCTCACCAGCAATGGA | + |
|
Preference number: 2 (lower is better) Translates to: SFFLSFMWPVNCIMGITKMVIPA*NLTSNG Trigger: TCCATTGCTGGTGAGATTGCAAGCTGGTATAACCAT...TTTTGTAATACCCATGATACAATTCACAGGCCACATGAAGCTCAAGAAGAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR-3UTR GCA 90 bp | TCCTTCTTCTTGAGCTTCATGTGGCCTGTGAATTGTATCATGGGTATTACAAAACATTTTCGGGATATATaGAGAGGAGTGGTATTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SFFLSFMWPVNCIMGITKHFRDI*RGVVLL Trigger: CAGCAATACCACTCCTCTGCATATATCCCGAAAATG...TTTTGTAATACCCATGATACAATTCACAGGCCACATGAAGCTCAAGAAGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CAA 90 bp | ATGGATATTTTTCCCTGTTCTAAGAAGGACAGAAGTTTCCACAATTaGGTCTTCCTTCTTCTTGAGCTTCATGTGGCCTGTGAATTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: MDIFPCSKKDRSFHN*VFLLLELHVACELY Trigger: ATACAATTCACAGGCCACATGAAGCTCAAGAAGAAGGAAGACCAAATTGTGGAAACTTCTGTCCTTCTTAGAACAGGGAAAAATATCCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR-3UTR TCA 90 bp | AACATCTTTTCCCAATCTGTTGGTTGCAGTTTTGTCCTATTGACACTGTCCTTTCCATTCAATGCAGAGTaGTATGTCACAGAACAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: NIFSQSVGCSFVLLTLSFPFNAE*YVTEQD Trigger: ATCTTGTTCTGTGACATATCACTCTGCATTGAATGG...AAAGGACAGTGTCAATAGGACAAAACTGCAACCAACAGATTGGGAAAAGATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTCTTCTTGAGCTTCATGTGGCCTGTGAATTGTATCATGGGTATTACAAAAATATACACATATCAATaGGCACATACCACGGGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SFFLSFMWPVNCIMGITKIYTYQ*AHTTGV Trigger: AACACCCGTGGTATGTGCTCATTGATATGTGTATAT...TTTTGTAATACCCATGATACAATTCACAGGCCACATGAAGCTCAAGAAGAAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR-3UTR GCA 90 bp | CATCTATTCCCATGGATATTTTTCCCTGTTCTAAGAAGGACAGAAGTTTCCACATCCCAATCTGTTGGTTaGAGTTTTGTCCTATTGACA | + |
|
Preference number: 2 (lower is better) Translates to: HLFPWIFFPVLRRTEVSTSQSVG*SFVLLT Trigger: TGTCAATAGGACAAAACTGCAACCAACAGATTGGGA...TGTGGAAACTTCTGTCCTTCTTAGAACAGGGAAAAATATCCATGGGAATAGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR-3UTR CCA 90 bp | AAAACTTGTGTCAGACAAGAGTGTTTTGCTGCATTGTGGTATGAAGTGGTAATGGAAGTTTCCACAATTTaGTCTTCCTTCTTCTTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: KTCVRQECFAALWYEVVMEVSTI*SSFFLS Trigger: GCTCAAGAAGAAGGAAGACCAAATTGTGGAAACTTC...CATTACCACTTCATACCACAATGCAGCAAAACACTCTTGTCTGACACAAGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CAA 90 bp | AGTACTTTGTATGAATTGGATATTAGCCCTCTAACAGATGTGGAGTaGGTAAACATCTTTTCCCAATCTGTTGGTTGCAGTTTTGTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: STLYELDISPLTDVE*VNIFSQSVGCSFVL Trigger: TAGGACAAAACTGCAACCAACAGATTGGGAAAAGATGTTTACCAACTCCACATCTGTTAGAGGGCTAATATCCAATTCATACAAAGTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR-3UTR CCA 90 bp | CATCTATTCCCATGGATATTTTTCCCTGTTCTAAGAAGGACAGAAGTTTCCACACTTTTCCCAATCTGTTaGTTGCAGTTTTGTCCTATT | + |
|
Preference number: 2 (lower is better) Translates to: HLFPWIFFPVLRRTEVSTLFPIC*LQFCPI Trigger: AATAGGACAAAACTGCAACCAACAGATTGGGAAAAG...TGTGGAAACTTCTGTCCTTCTTAGAACAGGGAAAAATATCCATGGGAATAGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CAA 90 bp | TTATTTGGTTCTCCAGAGTCTAACTTGTTGAGTACTTTGTATGAATaGGATATTAGCCCTCTAACAGATGTGGAGTTGGTAAACATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LFGSPESNLLSTLYE*DISPLTDVELVNIF Trigger: AAAGATGTTTACCAACTCCACATCTGTTAGAGGGCTAATATCCAATTCATACAAAGTACTCAACAAGTTAGACTCTGGAGAACCAAATAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CCA 72 bp | CAACCTTTCCTCACCAGCAACCCCGCCCCCACTTCCTaGTCTTGGCATTCCTCTACCATGGGACATCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QPFLTSNPAPTS*SWHSSTMGHQG Trigger: GCCTTGATGTCCCATGGTAGAGGAATGCCAAGACCAGGAAGTGGGGGCGGGGTTGCTGGTGAGGAAAGGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CCA 72 bp | TTCCTCACCAGCAACCCCGCCCCCACTTCCTGGTCTTaGCATTCCTCTACCATGGGACATCAAGGCTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: FLTSNPAPTSWS*HSSTMGHQGFT Trigger: TGTGAAGCCTTGATGTCCCATGGTAGAGGAATGCCAAGACCAGGAAGTGGGGGCGGGGTTGCTGGTGAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CCA 72 bp | CCGCCCCCACTTCCTGGTCTTGGCATTCCTCTACCATaGGACATCAAGGCTTCACAGAACAAAGAGCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PPPLPGLGIPLP*DIKASQNKEPL Trigger: GAGAGGCTCTTTGTTCTGTGAAGCCTTGATGTCCCATGGTAGAGGAATGCCAAGACCAGGAAGTGGGGGCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CCA 72 bp | GGTAGGTGGTTTAGTCCCTGGGAGCTTTGGGAATACTaGTTGATTCATATTGTTGTTCCCCCTATGGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: GRWFSPWELWEY*LIHIVVPPMGM Trigger: CATCCCCATAGGGGGAACAACAATATGAATCAACCAGTATTCCCAAAGCTCCCAGGGACTAAACCACCTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCATTCCTCTACCATGGGACATCAAGGCTTCACAGAACAAAGAGCCTCTCCTCTTCCCAATCTGTTGGTaGCAGTTTTGTCCTATTGAC | + |
|
Preference number: 3 (lower is better) Translates to: GIPLPWDIKASQNKEPLLFPICW*QFCPID Trigger: GTCAATAGGACAAAACTGCAACCAACAGATTGGGAA...GAGGAGAGGCTCTTTGTTCTGTGAAGCCTTGATGTCCCATGGTAGAGGAATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCATTCCTCTACCATGGGACATCAAGGCTTCACAGAACAAAGAGCCTCTCCTCTCTCCAGAGTCTAACTaGTTGAGTACTTTGTATGAA | + |
|
Preference number: 3 (lower is better) Translates to: GIPLPWDIKASQNKEPLLSPESN*LSTLYE Trigger: TTCATACAAAGTACTCAACAAGTTAGACTCTGGAGA...GAGGAGAGGCTCTTTGTTCTGTGAAGCCTTGATGTCCCATGGTAGAGGAATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGGACAGAAGTTTCCACAATTTGGTCTTCCTTCTTCTTGAGCTTCATGTGGCCAATGGTTATACCAGCTaGCAATCTCACCAGCAATGG | + |
|
Preference number: 3 (lower is better) Translates to: KDRSFHNLVFLLLELHVANGYTS*QSHQQW Trigger: CCATTGCTGGTGAGATTGCAAGCTGGTATAACCATT...GGCCACATGAAGCTCAAGAAGAAGGAAGACCAAATTGTGGAAACTTCTGTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CCA 72 bp | TTCCCTGTTCTAAGAAGGACAGAAGTTTCCACAATTTaGTCTTCCTTCTTCTTGAGCTTCATGTGGCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FPVLRRTEVSTI*SSFFLSFMWPV Trigger: CACAGGCCACATGAAGCTCAAGAAGAAGGAAGACCAAATTGTGGAAACTTCTGTCCTTCTTAGAACAGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGGACAGAAGTTTCCACAATTTGGTCTTCCTTCTTCTTGAGCTTCATGTGGCCTGCAGTTTTGTCCTATaGACACTGTCCTTTGCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: KDRSFHNLVFLLLELHVACSFVL*TLSFAL Trigger: TAAGGCAAAGGACAGTGTCAATAGGACAAAACTGCA...GGCCACATGAAGCTCAAGAAGAAGGAAGACCAAATTGTGGAAACTTCTGTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCTAATATACACATATCAATGAGCACATACCACGGGTGTTCTTTCGTGATTCCAGAGTCTAACTTGTaGAGTACTTTGTATGAATTG | + |
|
Preference number: 3 (lower is better) Translates to: WANIHISMSTYHGCSFVIPESNL*STLYEL Trigger: CAATTCATACAAAGTACTCAACAAGTTAGACTCTGG...AATCACGAAAGAACACCCGTGGTATGTGCTCATTGATATGTGTATATTAGCCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR TCA 72 bp | CAGAAGCTACTTCAGATTAAACATAAAAGGGAAGATTaGGCCAGGATATCATCTAAGGTGACATCCTTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: QKLLQIKHKRED*ARISSKVTSLH Trigger: ATGCAAGGATGTCACCTTAGATGATATCCTGGCTCAATCTTCCCTTTTATGTTTAATCTGAAGTAGCTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR TCA 72 bp | ATTGCTGGGTCCTCAGGTAGTATATGGCCAAATTTCTaGGGAACTGTTAAACTGATTTCCAGAATGGTTATA | + |
|
Preference number: 3 (lower is better) Translates to: IAGSSGSIWPNF*GTVKLISRMVI Trigger: TATAACCATTCTGGAAATCAGTTTAACAGTTCCTCAGAAATTTGGCCATATACTACCTGAGGACCCAGCAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CCA 72 bp | ATCAATGAGCACATACCACGGGTGTTCTTTCGTGATTaGGTAATCTCACTGAGAATAATATTTTCTTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: INEHIPRVFFRD*VISLRIIFSCS Trigger: GGAACAAGAAAATATTATTCTCAGTGAGATTACCCAATCACGAAAGAACACCCGTGGTATGTGCTCATTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CCA 72 bp | TCCACAATTTGGTCTTCCTTCTTCTTGAGCTTCATGTaGCCTGTGAATTGTATCATGGGTATTACAAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: STIWSSFFLSFM*PVNCIMGITKF Trigger: GAATTTTGTAATACCCATGATACAATTCACAGGCCACATGAAGCTCAAGAAGAAGGAAGACCAAATTGTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTAACTTGTTGAGTACTTTGTATGAATTGGATATTAGCCCTCTAACAGATGTGTCTAAGGTGACATCCTaGCATGTCACATGGATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: SNLLSTLYELDISPLTDVSKVTS*HVTWIL Trigger: TAAGATCCATGTGACATGCAAGGATGTCACCTTAGA...CACATCTGTTAGAGGGCTAATATCCAATTCATACAAAGTACTCAACAAGTTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR TCA 72 bp | GTAGTATATGGCCAAATTTCTGAGGAACTGTTAAACTaGTTTCCAGAATGGTTATACCAGCTTGCAATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: VVYGQISEELLN*FPEWLYQLAIS Trigger: TGAGATTGCAAGCTGGTATAACCATTCTGGAAATCAGTTTAACAGTTCCTCAGAAATTTGGCCATATACTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CCA 72 bp | TGGCCTGTGAATTGTATCATGGGTATTACAAAATTCTaGGCTAATATACACATATCAATGAGCACATACCAC | + |
|
Preference number: 3 (lower is better) Translates to: WPVNCIMGITKF*ANIHISMSTYH Trigger: GTGGTATGTGCTCATTGATATGTGTATATTAGCCCAGAATTTTGTAATACCCATGATACAATTCACAGGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTAACTTGTTGAGTACTTTGTATGAATTGGATATTAGCCCTCTAACAGATGTGCTCACTTGTCAATTCTaGATCTTAGAGCATAAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SNLLSTLYELDISPLTDVLTCQF*ILEHKL Trigger: TAGCTTATGCTCTAAGATCAAGAATTGACAAGTGAG...CACATCTGTTAGAGGGCTAATATCCAATTCATACAAAGTACTCAACAAGTTAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR TCA 72 bp | TTGTGTCAGACAAGAGTGTTTTGCTGCATTGTGGTATaGAGTGGTAATGGAGTCTCTGATATAAAAATGATA | + |
|
Preference number: 3 (lower is better) Translates to: LCQTRVFCCIVV*SGNGVSDIKMI Trigger: TATCATTTTTATATCAGAGACTCCATTACCACTTCATACCACAATGCAGCAAAACACTCTTGTCTGACACAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR CCA 90 bp | GGCATTCCTCTACCATGGGACATCAAGGCTTCACAGAACAAAGAGCCTCTCCTCAGTGCCAGCGTGATCTaGCGGGCCATGCAGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GIPLPWDIKASQNKEPLLSASVI*RAMQDQ Trigger: CTGGTCCTGCATGGCCCGCCAGATCACGCTGGCACT...GAGGAGAGGCTCTTTGTTCTGTGAAGCCTTGATGTCCCATGGTAGAGGAATGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CAA 72 bp | TTTCCTCACCAGCAACCCCGCCCCCACTTCCTGGTCTaGGCATTCCTCTACCATGGGACATCAAGGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FPHQQPRPHFLV*AFLYHGTSRLH Trigger: GTGAAGCCTTGATGTCCCATGGTAGAGGAATGCCAAGACCAGGAAGTGGGGGCGGGGTTGCTGGTGAGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR TCA 90 bp | AAGGACAGAAGTTTCCACAATTTGGTCTTCCTTCTTCTTGAGCTTCATGTGGCCAGCCCAGTGCCAGCGTaGTCTGGCGGGCCATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KDRSFHNLVFLLLELHVASPVPA*SGGPCR Trigger: CCTGCATGGCCCGCCAGATCACGCTGGCACTGGGCT...GGCCACATGAAGCTCAAGAAGAAGGAAGACCAAATTGTGGAAACTTCTGTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR GCA 90 bp | GGCATTCCTCTACCATGGGACATCAAGGCTTCACAGAACAAAGAGCCTCTCCTCGTTTCTCCTCTCCAGTaGAGAGCTGATCAGACATGT | + |
|
Preference number: 4 (lower is better) Translates to: GIPLPWDIKASQNKEPLLVSPLQ*RADQTC Trigger: ACATGTCTGATCAGCTCTGCACTGGAGAGGAGAAAC...GAGGAGAGGCTCTTTGTTCTGTGAAGCCTTGATGTCCCATGGTAGAGGAATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR GCA 90 bp | AATTTGGTCTTCCTTCTTCTTGAGCTTCATGTGGCCTGTGAATTGTATCATGGGAAGGCAAAAGCCCAGTaGCAGCGTGATCTGGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NLVFLLLELHVACELYHGKAKAQ*QRDLAG Trigger: GCCCGCCAGATCACGCTGGCACTGGGCTTTTGCCTT...CCCATGATACAATTCACAGGCCACATGAAGCTCAAGAAGAAGGAAGACCAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CAA 72 bp | AGGAGACAGGTATATCCGGCTCCTGTCAGCAAGCACTaGTTGGCATCCAAAATAGTGTCTGTGTTTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRQVYPAPVSKH*LASKIVSVFGD Trigger: GTCACCAAACACAGACACTATTTTGGATGCCAACAAGTGCTTGCTGACAGGAGCCGGATATACCTGTCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR GCA 90 bp | AAGGACAGAAGTTTCCACAATTTGGTCTTCCTTCTTCTTGAGCTTCATGTGGCCTGCCAAGACCACAAGTaGCCCAAAGATGGACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KDRSFHNLVFLLLELHVACQDHK*PKDGQD Trigger: ATCCTGTCCATCTTTGGGGCACTTGTGGTCTTGGCA...GGCCACATGAAGCTCAAGAAGAAGGAAGACCAAATTGTGGAAACTTCTGTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR TCA 90 bp | AAGGACAGAAGTTTCCACAATTTGGTCTTCCTTCTTCTTGAGCTTCATGTGGCCTATGAACAGCATGGATaGCAGCACTGTGATTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KDRSFHNLVFLLLELHVAYEQHG*QHCDSQ Trigger: CTGGGAATCACAGTGCTGTCATCCATGCTGTTCATA...GGCCACATGAAGCTCAAGAAGAAGGAAGACCAAATTGTGGAAACTTCTGTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR GCA 90 bp | TCCTTCTTCTTGAGCTTCATGTGGCCTGTGAATTGTATCATGGGTATTACAAAAGTACACAGCAGTGACTaGCAAGACCACAAGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFFLSFMWPVNCIMGITKVHSSD*QDHKCP Trigger: GGGGCACTTGTGGTCTTGGCAGTCACTGCTGTGTAC...TTTTGTAATACCCATGATACAATTCACAGGCCACATGAAGCTCAAGAAGAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CAA 72 bp | AGGTGGTTTAGTCCCTGGGAGCTTTGGGAATACTGGTaGATTCATATTGTTGTTCCCCCTATGGGGATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RWFSPWELWEYW*IHIVVPPMGML Trigger: TAACATCCCCATAGGGGGAACAACAATATGAATCAACCAGTATTCCCAAAGCTCCCAGGGACTAAACCACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR TCA 90 bp | AATTTGGTCTTCCTTCTTCTTGAGCTTCATGTGGCCTGTGAATTGTATCATGGGTGGATGACAGCACTGTaGTTCCCAGAGACATCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLVFLLLELHVACELYHGWMTAL*FPETSE Trigger: TTCAGATGTCTCTGGGAATCACAGTGCTGTCATCCA...CCCATGATACAATTCACAGGCCACATGAAGCTCAAGAAGAAGGAAGACCAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR TCA 90 bp | AACATCTTTTCCCAATCTGTTGGTTGCAGTTTTGTCCTATTGACACTGTCCTTTTGCATGGCTTGCCTATaGACAGCATGGATGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NIFSQSVGCSFVLLTLSFCMACL*TAWMTA Trigger: TGCTGTCATCCATGCTGTTCATAGGCAAGCCATGCA...AAAGGACAGTGTCAATAGGACAAAACTGCAACCAACAGATTGGGAAAAGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR TCA 90 bp | AACATCTTTTCCCAATCTGTTGGTTGCAGTTTTGTCCTATTGACACTGTCCTTTCCCTTCACACATGGCTaGTTCGAATTCCAGTTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: NIFSQSVGCSFVLLTLSFPFTHG*FEFQFR Trigger: ACGGAACTGGAATTCGAATCAGCCATGTGTGAAGGG...AAAGGACAGTGTCAATAGGACAAAACTGCAACCAACAGATTGGGAAAAGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR GCA 90 bp | AAGGACAGAAGTTTCCACAATTTGGTCTTCCTTCTTCTTGAGCTTCATGTGGCCCATAGCAGTCTCCATTaGTTTGGAGACAGAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: KDRSFHNLVFLLLELHVAHSSLH*FGDRET Trigger: TGTTTCTCTGTCTCCAAAGCAATGGAGACTGCTATG...GGCCACATGAAGCTCAAGAAGAAGGAAGACCAAATTGTGGAAACTTCTGTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR CCA 90 bp | TGGGCTAATATACACATATCAATGAGCACATACCACGGGTGTTCTTTCGTGATTCACTTCCAGCACAAATaGGCTGAGGTCAATGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WANIHISMSTYHGCSFVIHFQHK*AEVNVR Trigger: TCTGACATTGACCTCAGCCCATTTGTGCTGGAAGTG...AATCACGAAAGAACACCCGTGGTATGTGCTCATTGATATGTGTATATTAGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR CCA 90 bp | AAAACTTGTGTCAGACAAGAGTGTTTTGCTGCATTGTGGTATGAAGTGGTAATGGCAGGACCAGTTGCATaGCTTGCCTATGAACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KTCVRQECFAALWYEVVMAGPVA*LAYEQH Trigger: ATGCTGTTCATAGGCAAGCCATGCAACTGGTCCTGC...CATTACCACTTCATACCACAATGCAGCAAAACACTCTTGTCTGACACAAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR TCA 90 bp | TCTAACTTGTTGAGTACTTTGTATGAATTGGATATTAGCCCTCTAACAGATGTGCTACGTACACAGCAGTaGCTGCCAAGACCACAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SNLLSTLYELDISPLTDVLRTQQ*LPRPQV Trigger: CACTTGTGGTCTTGGCAGTCACTGCTGTGTACGTAG...CACATCTGTTAGAGGGCTAATATCCAATTCATACAAAGTACTCAACAAGTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CAA 72 bp | CTCACTTGTCAATTCTTGATCTTAGAGCATAAGCTATaGGTGTTCTGTCAGGAAATTTCCCCCTGTGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LTCQFLILEHKL*VFCQEISPCAN Trigger: ATTGGCACAGGGGGAAATTTCCTGACAGAACACCAATAGCTTATGCTCTAAGATCAAGAATTGACAAGTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR TCA 90 bp | TGGGCTAATATACACATATCAATGAGCACATACCACGGGTGTTCTTTCGTGATTAGCCTCCTGATCCAATaGTTCCTACGAGATATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WANIHISMSTYHGCSFVISLLIQ*FLRDIF Trigger: GAAAATATCTCGTAGGAATCATTGGATCAGGAGGCT...AATCACGAAAGAACACCCGTGGTATGTGCTCATTGATATGTGTATATTAGCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR CCA 90 bp | AAAACTTGTGTCAGACAAGAGTGTTTTGCTGCATTGTGGTATGAAGTGGTAATGATTGGCTTTCACCAATaGAGTGTGTCTGTGGACTAC | + |
|
Preference number: 4 (lower is better) Translates to: KTCVRQECFAALWYEVVMIGFHQ*SVSVDY Trigger: GTAGTCCACAGACACACTCCATTGGTGAAAGCCAAT...CATTACCACTTCATACCACAATGCAGCAAAACACTCTTGTCTGACACAAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR TCA 90 bp | TGGGCTAATATACACATATCAATGAGCACATACCACGGGTGTTCTTTCGTGATTGAATTTCAATGTTCTTaGACATCTTTGGAGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WANIHISMSTYHGCSFVIEFQCS*TSLEAP Trigger: TGGAGCCTCCAAAGATGTTCAAGAACATTGAAATTC...AATCACGAAAGAACACCCGTGGTATGTGCTCATTGATATGTGTATATTAGCCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR TCA 90 bp | AAAACTTGTGTCAGACAAGAGTGTTTTGCTGCATTGTGGTATGAAGTGGTAATGGGGATGGTTCTAGTATaGATAGGAAATAGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KTCVRQECFAALWYEVVMGMVLV*IGNSPP Trigger: TGGAGGACTATTTCCTATTCATACTAGAACCATCCC...CATTACCACTTCATACCACAATGCAGCAAAACACTCTTGTCTGACACAAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR GCA 90 bp | TCTAACTTGTTGAGTACTTTGTATGAATTGGATATTAGCCCTCTAACAGATGTGGAGCACACAGTTTTGTaGAGACTGAATCTGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SNLLSTLYELDISPLTDVEHTVL*RLNLEA Trigger: GGCTTCCAGATTCAGTCTGCACAAAACTGTGTGCTC...CACATCTGTTAGAGGGCTAATATCCAATTCATACAAAGTACTCAACAAGTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGTTGGTTGCAGTTTTGTCCTATTGACACTGTCCTTTGCCTTAAAATTGCTACCATGGCCTCAATCTaGATCTTATCACTGGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: ICWLQFCPIDTVLCLKIATMASI*ILSLGI Trigger: AATACCCAGTGATAAGATCCAGATTGAGGCCATGGT...AGCAATTTTAAGGCAAAGGACAGTGTCAATAGGACAAAACTGCAACCAACAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR CCA 90 bp | AATTTGGTCTTCCTTCTTCTTGAGCTTCATGTGGCCTGTGAATTGTATCATGGGTTTGCATTCTCTCATTaGAGTAGACTTTTGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: NLVFLLLELHVACELYHGFAFSH*SRLLEW Trigger: CCATTCCAAAAGTCTACTCCAATGAGAGAATGCAAA...CCCATGATACAATTCACAGGCCACATGAAGCTCAAGAAGAAGGAAGACCAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR CCA 90 bp | AAAACTTGTGTCAGACAAGAGTGTTTTGCTGCATTGTGGTATGAAGTGGTAATGGTTCTTGAACATCTTTaGAGGCTCCAACACCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KTCVRQECFAALWYEVVMVLEHL*RLQHQV Trigger: TACTTGGTGTTGGAGCCTCCAAAGATGTTCAAGAAC...CATTACCACTTCATACCACAATGCAGCAAAACACTCTTGTCTGACACAAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CAA 72 bp | TCAGGATGGCATTTCCTTCATTCTCTGTTCCACACTTaGTCTCTTCATCTATTCCCATGGATATTTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGWHFLHSLFHT*SLHLFPWIFFP Trigger: AGGGAAAAATATCCATGGGAATAGATGAAGAGACAAAGTGTGGAACAGAGAATGAAGGAAATGCCATCCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR TCA 90 bp | TCCTTCTTCTTGAGCTTCATGTGGCCTGTGAATTGTATCATGGGTATTACAAAAGTTCCAAAACAACGATaGGTTCTTTGGAAGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFFLSFMWPVNCIMGITKVPKQR*VLWKNK Trigger: CTTGTTCTTCCAAAGAACTCATCGTTGTTTTGGAAC...TTTTGTAATACCCATGATACAATTCACAGGCCACATGAAGCTCAAGAAGAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR CCA 90 bp | AACATCTTTTCCCAATCTGTTGGTTGCAGTTTTGTCCTATTGACACTGTCCTTTATATCCATCAGCACATaGAATACAAGCAAAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NIFSQSVGCSFVLLTLSFISIST*NTSKAA Trigger: TGCTGCTTTGCTTGTATTCCATGTGCTGATGGATAT...AAAGGACAGTGTCAATAGGACAAAACTGCAACCAACAGATTGGGAAAAGATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGTTGGTTGCAGTTTTGTCCTATTGACACTGTCCTTTGCCTTAAAATTGCTGGCGGGTTTTGGATATaGAAATTCTGTAGGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ICWLQFCPIDTVLCLKIAGGFWI*KFCRQK Trigger: TTTTTGCCTACAGAATTTCCATATCCAAAACCCGCC...AGCAATTTTAAGGCAAAGGACAGTGTCAATAGGACAAAACTGCAACCAACAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CAA 72 bp | TCTCCAGAGTCTAACTTGTTGAGTACTTTGTATGAATaGGATATTAGCCCTCTAACAGATGTGGAGTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SPESNLLSTLYE*DISPLTDVELV Trigger: TACCAACTCCACATCTGTTAGAGGGCTAATATCCAATTCATACAAAGTACTCAACAAGTTAGACTCTGGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR TCA 90 bp | AACATCTTTTCCCAATCTGTTGGTTGCAGTTTTGTCCTATTGACACTGTCCTTTAAGTATATAGAACAATaGCTTTGGCACTGGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: NIFSQSVGCSFVLLTLSFKYIEQ*LWHWNS Trigger: AGAGTTCCAGTGCCAAAGTCATTGTTCTATATACTT...AAAGGACAGTGTCAATAGGACAAAACTGCAACCAACAGATTGGGAAAAGATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR GCA 90 bp | TCCTTCTTCTTGAGCTTCATGTGGCCTGTGAATTGTATCATGGGTATTACAAAACGAGATATTTTCCCGTaGTGTTTCTATAATTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SFFLSFMWPVNCIMGITKRDIFP*CFYNWV Trigger: AACCCAATTATAGAAACAGCACGGGAAAATATCTCG...TTTTGTAATACCCATGATACAATTCACAGGCCACATGAAGCTCAAGAAGAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR GCA 90 bp | AACATCTTTTCCCAATCTGTTGGTTGCAGTTTTGTCCTATTGACACTGTCCTTTCCAATAAGTCACAATTaGTTAAATGATCCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NIFSQSVGCSFVLLTLSFPISHN*LNDPGH Trigger: ATGCCCTGGATCATTTAAGCAATTGTGACTTATTGG...AAAGGACAGTGTCAATAGGACAAAACTGCAACCAACAGATTGGGAAAAGATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CAA 72 bp | TGCTTTGCAATTTTACAAGGTCTCACTTGTCAATTCTaGATCTTAGAGCATAAGCTATTGGTGTTCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CFAILQGLTCQF*ILEHKLLVFCQ Trigger: CTGACAGAACACCAATAGCTTATGCTCTAAGATCAAGAATTGACAAGTGAGACCTTGTAAAATTGCAAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR GCA 90 bp | ATCTGTTGGTTGCAGTTTTGTCCTATTGACACTGTCCTTTGCCTTAAAATTGCTCATAGAATGGTTTTCTaGTTCTACATATCCAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ICWLQFCPIDTVLCLKIAHRMVF*FYISSQ Trigger: TTGACTGGATATGTAGAAGCAGAAAACCATTCTATG...AGCAATTTTAAGGCAAAGGACAGTGTCAATAGGACAAAACTGCAACCAACAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| 3UTR CAA 72 bp | TTAATAGGGTTATTTGGTTCTCCAGAGTCTAACTTGTaGAGTACTTTGTATGAATTGGATATTAGCCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LIGLFGSPESNL*STLYELDISPL Trigger: TAGAGGGCTAATATCCAATTCATACAAAGTACTCAACAAGTTAGACTCTGGAGAACCAAATAACCCTATTAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS CCA 90 bp | AGAATGGAAGACAGACAAAGGCAAAAGCCCAGTGCCAGCGTGATCTaGCGGGCCATGCAGGACCAGTTGCATGGCTTGCCTATGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RMEDRQRQKPSASVI*RAMQDQLHGLPMNS Trigger: GCTGTTCATAGGCAAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCACGCTGGCACTGGGCTTTTGCCTTTGTCTGTCTTCCATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS GCA 90 bp | GTGTCTGTGGACTACGTACACAGCAGTGACTGCCAAGACCACAAGTaGCCCAAAGATGGACAGGATGACAAGAGTGAACCCCAGTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VSVDYVHSSDCQDHK*PKDGQDDKSEPQCL Trigger: GAGGCACTGGGGTTCACTCTTGTCATCCTGTCCATCTTTGGGGCACTTGTGGTCTTGGCAGTCACTGCTGTGTACGTAGTCCACAGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS CCA 90 bp | AAGCTTAGCTCTCGGTCATTGGCTTTCACCAATGGAGTGTGTCTGTaGACTACGTACACAGCAGTGACTGCCAAGACCACAAGTGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KLSSRSLAFTNGVCL*TTYTAVTAKTTSAP Trigger: TGGGGCACTTGTGGTCTTGGCAGTCACTGCTGTGTACGTAGTCCACAGACACACTCCATTGGTGAAAGCCAATGACCGAGAGCTAAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS GCA 90 bp | GTGCCTCTTCGTAAGCGAGGAATTCCACAAGCTTTGGCACACACTTaGTCTTCTCTGCATTGGACCAGTCATCTTCACCGCATGGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: VPLRKRGIPQALAHT*SSLHWTSHLHRMDH Trigger: GTGATCCATGCGGTGAAGATGACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCTTGTGGAATTCCTCGCTTACGAAGAGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS GCA 90 bp | CACAAGTGCCCCAAAGATGGACAGGATGACAAGAGTGAACCCCAGTaGCTCTTCGTAAGCGAGGAATTCCACAAGCTTTGGCACACACTT | + |
|
Preference number: 5 (lower is better) Translates to: HKCPKDGQDDKSEPQ*LFVSEEFHKLWHTL Trigger: AAGTGTGTGCCAAAGCTTGTGGAATTCCTCGCTTACGAAGAGGCACTGGGGTTCACTCTTGTCATCCTGTCCATCTTTGGGGCACTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS CCA 90 bp | AGTGAACCCCAGTGCCTCTTCGTAAGCGAGGAATTCCACAAGCTTTaGCACACACTTGCTCTTCTCTGCATTGGACCAGTCATCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: SEPQCLFVSEEFHKL*HTLALLCIGPVIFT Trigger: GGTGAAGATGACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCTTGTGGAATTCCTCGCTTACGAAGAGGCACTGGGGTTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS GCA 90 bp | TTTCACCAATGGAGTGTGTCTGTGGACTACGTACACAGCAGTGACTaGCAAGACCACAAGTGCCCCAAAGATGGACAGGATGACAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FHQWSVSVDYVHSSD*QDHKCPKDGQDDKS Trigger: ACTCTTGTCATCCTGTCCATCTTTGGGGCACTTGTGGTCTTGGCAGTCACTGCTGTGTACGTAGTCCACAGACACACTCCATTGGTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS CCA 90 bp | CGAGGAATTCCACAAGCTTTGGCACACACTTGCTCTTCTCTGCATTaGACCAGTCATCTTCACCGCATGGATCACATTCTCTTTGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGIPQALAHTCSSLH*TSHLHRMDHILFVL Trigger: CAGGACAAAGAGAATGTGATCCATGCGGTGAAGATGACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCTTGTGGAATTCCTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS TCA 90 bp | CCTATGAACAGCATGGATGACAGCACTGTGATTCCCAGAGACATCTaGATGAGGAAGCTTAGCTCTCGGTCATTGGCTTTCACCAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: PMNSMDDSTVIPRDI*MRKLSSRSLAFTNG Trigger: TCCATTGGTGAAAGCCAATGACCGAGAGCTAAGCTTCCTCATTCAGATGTCTCTGGGAATCACAGTGCTGTCATCCATGCTGTTCATAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS GCA 90 bp | GTAAGCGAGGAATTCCACAAGCTTTGGCACACACTTGCTCTTCTCTaGATTGGACCAGTCATCTTCACCGCATGGATCACATTCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VSEEFHKLWHTLALL*IGPVIFTAWITFSL Trigger: CAAAGAGAATGTGATCCATGCGGTGAAGATGACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCTTGTGGAATTCCTCGCTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS GCA 90 bp | TTTCTTTTCTTCCTGTCCTGTAAGAAGTGTCATAGCAGTCTCCATTaGTTTGGAGACAGAGAAACAGGTGTCGAAGATCTGGTAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLFFLSCKKCHSSLH*FGDRETGVEDLVAQ Trigger: CTGGGCTACCAGATCTTCGACACCTGTTTCTCTGTCTCCAAAGCAATGGAGACTGCTATGACACTTCTTACAGGACAGGAAGAAAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS-3UTR CAA 90 bp | TCCTTCTTCTTGAGCTTCATGTGGCCTGTGAATTGTATCATGGGTATTACAAAAGCCATGCAGGACCAGTaGCATGGCTTGCCTATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SFFLSFMWPVNCIMGITKAMQDQ*HGLPMN Trigger: GTTCATAGGCAAGCCATGCAACTGGTCCTGCATGGC...TTTTGTAATACCCATGATACAATTCACAGGCCACATGAAGCTCAAGAAGAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR CAA 90 bp | AATTTGGTCTTCCTTCTTCTTGAGCTTCATGTGGCCTGTGAATTGTATCATGGGCTGGAGCACACAGTTTaGTGCAGACTGAATCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: NLVFLLLELHVACELYHGLEHTV*CRLNLE Trigger: TTCCAGATTCAGTCTGCACAAAACTGTGTGCTCCAG...CCCATGATACAATTCACAGGCCACATGAAGCTCAAGAAGAAGGAAGACCAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS GCA 90 bp | TATCCAGATAGGTGTTTTTCAGATCTTCCAGTTTCTCCTCTCCAGTaGAGAGCTGATCAGACATGTCATACAGTCTGTCTTCTTTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: YPDRCFSDLPVSPLQ*RADQTCHTVCLLYQ Trigger: CTGGTAAAGAAGACAGACTGTATGACATGTCTGATCAGCTCTGCACTGGAGAGGAGAAACTGGAAGATCTGAAAAACACCTATCTGGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS-3UTR CAA 90 bp | AAAACTTGTGTCAGACAAGAGTGTTTTGCTGCATTGTGGTATGAAGTGGTAATGAGCTTTGGCACACACTaGCTCTTCTCTGCATTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KTCVRQECFAALWYEVVMSFGTH*LFSALD Trigger: GTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCT...CATTACCACTTCATACCACAATGCAGCAAAACACTCTTGTCTGACACAAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS CCA 90 bp | AACCAGAATTCCAAAAGTGATACATTTCCCTTCATAATAGTTATCTaGCAGCTGGCGAGCCACAAAGGTTGTAAGAAAACACAGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: NQNSKSDTFPFIIVI*QLASHKGCKKTQQS Trigger: GCTCTGCTGTGTTTTCTTACAACCTTTGTGGCTCGCCAGCTGCCAGATAACTATTATGAAGGGAAATGTATCACTTTTGGAATTCTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS-3UTR CAA 90 bp | TGGGCTAATATACACATATCAATGAGCACATACCACGGGTGTTCTTTCGTGATTATTTCCACAGCCACTTaGAATTTGCCTTTGGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WANIHISMSTYHGCSFVIISTAT*NLPLVL Trigger: GAGCACCAAAGGCAAATTCAAAGTGGCTGTGGAAAT...AATCACGAAAGAACACCCGTGGTATGTGCTCATTGATATGTGTATATTAGCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR CAA 90 bp | TCTAACTTGTTGAGTACTTTGTATGAATTGGATATTAGCCCTCTAACAGATGTGGGAATTCCACAAGCTTaGGCACACACTTGCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SNLLSTLYELDISPLTDVGIPQA*AHTCSS Trigger: AGAAGAGCAAGTGTGTGCCAAAGCTTGTGGAATTCC...CACATCTGTTAGAGGGCTAATATCCAATTCATACAAAGTACTCAACAAGTTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR CAA 90 bp | TGGGCTAATATACACATATCAATGAGCACATACCACGGGTGTTCTTTCGTGATTTCTTATCACTGGGTATaGAGCGATAAAATGATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: WANIHISMSTYHGCSFVISYHWV*SDKMME Trigger: TTCCATCATTTTATCGCTCAATACCCAGTGATAAGA...AATCACGAAAGAACACCCGTGGTATGTGCTCATTGATATGTGTATATTAGCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS-3UTR CAA 90 bp | AAAACTTGTGTCAGACAAGAGTGTTTTGCTGCATTGTGGTATGAAGTGGTAATGAAGATAATGAAGCACTaGGGAAGAAATACACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KTCVRQECFAALWYEVVMKIMKH*GRNTQP Trigger: AGGCTGTGTATTTCTTCCCAAGTGCTTCATTATCTT...CATTACCACTTCATACCACAATGCAGCAAAACACTCTTGTCTGACACAAGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS CCA 90 bp | AAAGATGATCTTTACATTTTGAATTTCAATGTTCTTGAACATCTTTaGAGGCTCCAACACCAAGTACACTGCACATACACAAATCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: KDDLYILNFNVLEHL*RLQHQVHCTYTNLR Trigger: GCGGAGATTTGTGTATGTGCAGTGTACTTGGTGTTGGAGCCTCCAAAGATGTTCAAGAACATTGAAATTCAAAATGTAAAGATCATCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS-3UTR CAA 90 bp | TCTAACTTGTTGAGTACTTTGTATGAATTGGATATTAGCCCTCTAACAGATGTGCATAAGATACACAGCTaGTCTGACATTGTTTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SNLLSTLYELDISPLTDVHKIHS*SDIVCD Trigger: ATCACAAACAATGTCAGACAAGCTGTGTATCTTATG...CACATCTGTTAGAGGGCTAATATCCAATTCATACAAAGTACTCAACAAGTTAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177184.9 |
||
| CDS CCA 72 bp | GACAGACAAAGGCAAAAGCCCAGTGCCAGCGTGATCTaGCGGGCCATGCAGGACCAGTTGCATGGCTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: DRQRQKPSASVI*RAMQDQLHGLP Trigger: AGGCAAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCACGCTGGCACTGGGCTTTTGCCTTTGTCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS TCA 72 bp | TGGAAGACAGACAAAGGCAAAAGCCCAGTGCCAGCGTaGTCTGGCGGGCCATGCAGGACCAGTTGCATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: WKTDKGKSPVPA*SGGPCRTSCMA Trigger: AGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCACGCTGGCACTGGGCTTTTGCCTTTGTCTGTCTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS CAA 72 bp | AGTGCCAGCGTGATCTGGCGGGCCATGCAGGACCAGTaGCATGGCTTGCCTATGAACAGCATGGATGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: SASVIWRAMQDQ*HGLPMNSMDDS Trigger: GCTGTCATCCATGCTGTTCATAGGCAAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCACGCTGGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS CAA 90 bp | AGTGCCAGCGTGATCTGGCGGGCCATGCAGGACCAGTTGCATGGCTaGCCTATGAACAGCATGGATGACAGCACTGTGATTCCCAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SASVIWRAMQDQLHG*PMNSMDDSTVIPRD Trigger: GTCTCTGGGAATCACAGTGCTGTCATCCATGCTGTTCATAGGCAAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCACGCTGGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS CAA 90 bp | CAAAAGCCCAGTGCCAGCGTGATCTGGCGGGCCATGCAGGACCAGTaGCATGGCTTGCCTATGAACAGCATGGATGACAGCACTGTGATT | + |
|
Preference number: 6 (lower is better) Translates to: QKPSASVIWRAMQDQ*HGLPMNSMDDSTVI Trigger: AATCACAGTGCTGTCATCCATGCTGTTCATAGGCAAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCACGCTGGCACTGGGCTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS CAA 72 bp | GTGATCTGGCGGGCCATGCAGGACCAGTTGCATGGCTaGCCTATGAACAGCATGGATGACAGCACTGTGATT | + |
|
Preference number: 6 (lower is better) Translates to: VIWRAMQDQLHG*PMNSMDDSTVI Trigger: AATCACAGTGCTGTCATCCATGCTGTTCATAGGCAAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS TCA 72 bp | CCAATGGAGTGTGTCTGTGGACTACGTACACAGCAGTaGCTGCCAAGACCACAAGTGCCCCAAAGATGGACA | + |
|
Preference number: 6 (lower is better) Translates to: PMECVCGLRTQQ*LPRPQVPQRWT Trigger: TGTCCATCTTTGGGGCACTTGTGGTCTTGGCAGTCACTGCTGTGTACGTAGTCCACAGACACACTCCATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS GCA 72 bp | GACTACGTACACAGCAGTGACTGCCAAGACCACAAGTaGCCCAAAGATGGACAGGATGACAAGAGTGAACCC | + |
|
Preference number: 6 (lower is better) Translates to: DYVHSSDCQDHK*PKDGQDDKSEP Trigger: GGGTTCACTCTTGTCATCCTGTCCATCTTTGGGGCACTTGTGGTCTTGGCAGTCACTGCTGTGTACGTAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS CCA 72 bp | CAGTGCCTCTTCGTAAGCGAGGAATTCCACAAGCTTTaGCACACACTTGCTCTTCTCTGCATTGGACCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: QCLFVSEEFHKL*HTLALLCIGPV Trigger: GACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCTTGTGGAATTCCTCGCTTACGAAGAGGCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS CCA 72 bp | TCTCGGTCATTGGCTTTCACCAATGGAGTGTGTCTGTaGACTACGTACACAGCAGTGACTGCCAAGACCACA | + |
|
Preference number: 6 (lower is better) Translates to: SRSLAFTNGVCL*TTYTAVTAKTT Trigger: TGTGGTCTTGGCAGTCACTGCTGTGTACGTAGTCCACAGACACACTCCATTGGTGAAAGCCAATGACCGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS CAA 72 bp | GTCGAATCCCCTTTCGGGTCCCTGGAGCACACAGTTTaGTGCAGACTGAATCTGGAAGCCTTGAAGATTCAG | + |
|
Preference number: 6 (lower is better) Translates to: VESPFGSLEHTV*CRLNLEALKIQ Trigger: CTGAATCTTCAAGGCTTCCAGATTCAGTCTGCACAAAACTGTGTGCTCCAGGGACCCGAAAGGGGATTCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS CAA 90 bp | GTTGTCCAGGTCGAATCCCCTTTCGGGTCCCTGGAGCACACAGTTTaGTGCAGACTGAATCTGGAAGCCTTGAAGATTCAGTGTTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: VVQVESPFGSLEHTV*CRLNLEALKIQCSK Trigger: TTTGGAACACTGAATCTTCAAGGCTTCCAGATTCAGTCTGCACAAAACTGTGTGCTCCAGGGACCCGAAAGGGGATTCGACCTGGACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS CAA 90 bp | GCGAGGAATTCCACAAGCTTTGGCACACACTTGCTCTTCTCTGCATaGGACCAGTCATCTTCACCGCATGGATCACATTCTCTTTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ARNSTSFGTHLLFSA*DQSSSPHGSHSLCP Trigger: AGGACAAAGAGAATGTGATCCATGCGGTGAAGATGACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCTTGTGGAATTCCTCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS TCA 72 bp | AGCATGGATGACAGCACTGTGATTCCCAGAGACATCTaGATGAGGAAGCTTAGCTCTCGGTCATTGGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SMDDSTVIPRDI*MRKLSSRSLAF Trigger: GAAAGCCAATGACCGAGAGCTAAGCTTCCTCATTCAGATGTCTCTGGGAATCACAGTGCTGTCATCCATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS GCA 72 bp | TTCCTGTCCTGTAAGAAGTGTCATAGCAGTCTCCATTaGTTTGGAGACAGAGAAACAGGTGTCGAAGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: FLSCKKCHSSLH*FGDRETGVEDL Trigger: CAGATCTTCGACACCTGTTTCTCTGTCTCCAAAGCAATGGAGACTGCTATGACACTTCTTACAGGACAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS CAA 90 bp | ATTGTAAGGCACACTGTTGTTGGGCCAGGTACAGTTAAAAGCAGTTaGCCAGAATTCAATGGTCAAGACATCATTTGGATCCTTGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: IVRHTVVGPGTVKSS*PEFNGQDIIWILAR Trigger: CCTAGCAAGGATCCAAATGATGTCTTGACCATTGAATTCTGGCAAACTGCTTTTAACTGTACCTGGCCCAACAACAGTGTGCCTTACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS TCA 72 bp | TGGAAACTGGAATTTGTCACTAAGAATTGCGCTGGATaGAGTATAGCCTACCTGAGGCATGTAATACAACCC | + |
|
Preference number: 6 (lower is better) Translates to: WKLEFVTKNCAG*SIAYLRHVIQP Trigger: GGGTTGTATTACATGCCTCAGGTAGGCTATACTTCATCCAGCGCAATTCTTAGTGACAAATTCCAGTTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS TCA 72 bp | TGGATGCCAAAATGGCAAATATTTCCACAGCCACTTTaGATTTGCCTTTGGTGCTCAAGTAAGCAGGGACAA | + |
|
Preference number: 6 (lower is better) Translates to: WMPKWQIFPQPL*ICLWCSSKQGQ Trigger: TTGTCCCTGCTTACTTGAGCACCAAAGGCAAATTCAAAGTGGCTGTGGAAATATTTGCCATTTTGGCATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS GCA 72 bp | ACACTGTTGTTGGGCCAGGTACAGTTAAAAGCAGTTTaGCAGAATTCAATGGTCAAGACATCATTTGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: TLLLGQVQLKAV*QNSMVKTSFGS Trigger: GGATCCAAATGATGTCTTGACCATTGAATTCTGGCAAACTGCTTTTAACTGTACCTGGCCCAACAACAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS CCA 72 bp | TCCAAAAGTGATACATTTCCCTTCATAATAGTTATCTaGCAGCTGGCGAGCCACAAAGGTTGTAAGAAAACA | + |
|
Preference number: 6 (lower is better) Translates to: SKSDTFPFIIVI*QLASHKGCKKT Trigger: TGTTTTCTTACAACCTTTGTGGCTCGCCAGCTGCCAGATAACTATTATGAAGGGAAATGTATCACTTTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS CAA 72 bp | TTTGGCACTGGAACTCTTTATTGCCTTAACAGCTTTTaGCATTCTCTCATTGGAGTAGACTTTTGGAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: FGTGTLYCLNSF*HSLIGVDFWNG Trigger: ACCATTCCAAAAGTCTACTCCAATGAGAGAATGCAAAAAGCTGTTAAGGCAATAAAGAGTTCCAGTGCCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS CAA 90 bp | AACAATGACTTTGGCACTGGAACTCTTTATTGCCTTAACAGCTTTTaGCATTCTCTCATTGGAGTAGACTTTTGGAATGGTTTCAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: NNDFGTGTLYCLNSF*HSLIGVDFWNGFRE Trigger: TTCTCTGAAACCATTCCAAAAGTCTACTCCAATGAGAGAATGCAAAAAGCTGTTAAGGCAATAAAGAGTTCCAGTGCCAAAGTCATTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS CCA 72 bp | CTTTACATTTTGAATTTCAATGTTCTTGAACATCTTTaGAGGCTCCAACACCAAGTACACTGCACATACACA | + |
|
Preference number: 6 (lower is better) Translates to: LYILNFNVLEHL*RLQHQVHCTYT Trigger: TGTGTATGTGCAGTGTACTTGGTGTTGGAGCCTCCAAAGATGTTCAAGAACATTGAAATTCAAAATGTAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS CAA 72 bp | CTGAGGTCAATGTCAGAAGTATATAGAACAATGACTTaGGCACTGGAACTCTTTATTGCCTTAACAGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LRSMSEVYRTMT*ALELFIALTAF Trigger: AAAAGCTGTTAAGGCAATAAAGAGTTCCAGTGCCAAAGTCATTGTTCTATATACTTCTGACATTGACCTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||
| CDS CAA 90 bp | AGAACAAGTTCATATTTTGTAGAATTAAATATGTATTCTCCAACCTaGACAAAGGTGATTTCTCCAGCATCACCCATGTGCCAATTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RTSSYFVELNMYSPT*TKVISPASPMCQLR Trigger: CCTCAATTGGCACATGGGTGATGCTGGAGAAATCACCTTTGTCAAGGTTGGAGAATACATATTTAATTCTACAAAATATGAACTTGTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170270.3 ENSMUST00000177184.9 |
||