Pregenerated sensors for VMN2R48 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095914

Ensembl transcript IDs: ENSMUST00000165611.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TACATTCCGCACTGCACACAGAGGATGGCATCTTTCTTCTTCCTGTaGCCAACTCAATCATGTCTACATATAAGTGAGAGTGTCGACCAT	+
Preference number: 5 (lower is better) Translates to: YIPHCTQRMASFFFL*PTQSCLHISESVDH Trigger: ATGGTCGACACTCTCACTTATATGTAGACATGATTGAGTTGGCCACAGGAAGAAGAAAGATGCCATCCTCTGTGTGCAGTGCGGAATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165611.2
CDS CCA 90 bp	AGTAGGCCCTTCTTAGAAAGGAGTTTACCTTCAAGCAGTGAGAACTaGCTCTTTTTCCATTGTCTATTGCCTGATTATCAGCATGTTGCA	+
Preference number: 5 (lower is better) Translates to: SRPFLERSLPSSSEN*LFFHCLLPDYQHVA Trigger: TGCAACATGCTGATAATCAGGCAATAGACAATGGAAAAAGAGCCAGTTCTCACTGCTTGAAGGTAAACTCCTTTCTAAGAAGGGCCTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165611.2
CDS CAA 72 bp	TCTTTTTCCATTGTCTATTGCCTGATTATCAGCATGTaGCAGATTCATCTCATGGAGGGCATGGGCTATGGC	+
Preference number: 6 (lower is better) Translates to: SFSIVYCLIISM*QIHLMEGMGYG Trigger: GCCATAGCCCATGCCCTCCATGAGATGAATCTGCAACATGCTGATAATCAGGCAATAGACAATGGAAAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165611.2
CDS CCA 72 bp	TTCTTAGAAAGGAGTTTACCTTCAAGCAGTGAGAACTaGCTCTTTTTCCATTGTCTATTGCCTGATTATCAG	+
Preference number: 6 (lower is better) Translates to: FLERSLPSSSEN*LFFHCLLPDYQ Trigger: CTGATAATCAGGCAATAGACAATGGAAAAAGAGCCAGTTCTCACTGCTTGAAGGTAAACTCCTTTCTAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165611.2
CDS CAA 90 bp	ATTTCATCCAAATTTATTCTCCAAAAGCACCTGGGACCAATGAAATaGGCCATGAGAAGTGTAATATTAAGGAGGAAGAAGACTCTCATG	+
Preference number: 6 (lower is better) Translates to: ISSKFILQKHLGPMK*AMRSVILRRKKTLM Trigger: CATGAGAGTCTTCTTCCTCCTTAATATTACACTTCTCATGGCCAATTTCATTGGTCCCAGGTGCTTTTGGAGAATAAATTTGGATGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165611.2

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