Pregenerated sensors for VMN2R45 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090662Ensembl transcript IDs: ENSMUST00000164845.4
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGGCCCCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGATCTGCAGGAAGCAGGAGTGGGTaGGTTGGGGAGCAGGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: GPPMKELEKVPKELKGSAGSRSG*VGEQGG Trigger: ACCACCCTGCTCCCCAACCCACCCACTCCTGCTTCC...TGCAGATCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTTCATTGGGGGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR-3UTR CCA 90 bp | GGGCCCCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGATCTGCAGTCTGGAAGCAGGAGTaGGTGGGTTGGGGAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: GPPMKELEKVPKELKGSAVWKQE*VGWGAG Trigger: CCCTGCTCCCCAACCCACCCACTCCTGCTTCCAGAC...TGCAGATCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTTCATTGGGGGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR-3UTR GCA 90 bp | GGGCCCCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGATCTGCACCCTGTAGAGGGGAATaGCAGGGTCTGGAAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GPPMKELEKVPKELKGSAPCRGE*QGLEAG Trigger: TCCTGCTTCCAGACCCTGGCATTCCCCTCTACAGGG...TGCAGATCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTTCATTGGGGGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR CAA 90 bp | GTGTTTAGCTGCATATGTAGCAGAAGATGGGATACTCTACCATCATaGAGAGGAGAGGCCCTTGATCTTGTGAAGATTATATGCCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: VFSCICSRRWDTLPS*RGEALDLVKIICPC Trigger: ACAGGGGCATATAATCTTCACAAGATCAAGGGCCTCTCCTCTCAATGATGGTAGAGTATCCCATCTTCTGCTACATATGCAGCTAAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR-3UTR CCA 90 bp | ATAAGCTTTTATAATTCACTATTGCCTATGCTAGCAACAGTTTCTGACAGGACCGCCCTTCCCAATCCCTaGAGACTTAAGTCTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: ISFYNSLLPMLATVSDRTALPNP*RLKSLW Trigger: CCAGAGAGACTTAAGTCTCCAGGGATTGGGAAGGGC...GGTCCTGTCAGAAACTGTTGCTAGCATAGGCAATAGTGAATTATAAAAGCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR-3UTR TCA 90 bp | ATAAGCTTTTATAATTCACTATTGCCTATGCTAGCAACAGTTTCTGACAGGACCAAGTACCCAAGGAGCTaGAGGGATCTGCAACCCTAT | + |
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Preference number: 2 (lower is better) Translates to: ISFYNSLLPMLATVSDRTKYPRS*RDLQPY Trigger: ATAGGGTTGCAGATCCCTTCAGCTCCTTGGGTACTT...GGTCCTGTCAGAAACTGTTGCTAGCATAGGCAATAGTGAATTATAAAAGCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR-3UTR GCA 90 bp | ATAAGCTTTTATAATTCACTATTGCCTATGCTAGCAACAGTTTCTGACAGGACCGGAGCTGAAGGGATCTaGAACCCTATAGGACGAACA | + |
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Preference number: 2 (lower is better) Translates to: ISFYNSLLPMLATVSDRTGAEGI*NPIGRT Trigger: TGTTCGTCCTATAGGGTTGCAGATCCCTTCAGCTCC...GGTCCTGTCAGAAACTGTTGCTAGCATAGGCAATAGTGAATTATAAAAGCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR-3UTR GCA 90 bp | AAATGTCATTTTCTAGAAAGCAGCGTAATTAAAGCATCTGGCTCTCATTCTGTTGACCTCAATCAGAACTaGACACAGAGGAAAATCTCT | + |
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Preference number: 2 (lower is better) Translates to: KCHFLESSVIKASGSHSVDLNQN*TQRKIS Trigger: AGAGATTTTCCTCTGTGTGCAGTTCTGATTGAGGTC...AACAGAATGAGAGCCAGATGCTTTAATTACGCTGCTTTCTAGAAAATGACATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR-3UTR GCA 90 bp | ATAAGCTTTTATAATTCACTATTGCCTATGCTAGCAACAGTTTCTGACAGGACCGCTTATGTGTTTAGCTaGATATGTAGCAGAAGATGG | + |
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Preference number: 2 (lower is better) Translates to: ISFYNSLLPMLATVSDRTAYVFS*ICSRRW Trigger: CCATCTTCTGCTACATATGCAGCTAAACACATAAGC...GGTCCTGTCAGAAACTGTTGCTAGCATAGGCAATAGTGAATTATAAAAGCTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR-3UTR TCA 90 bp | AAATGTCATTTTCTAGAAAGCAGCGTAATTAAAGCATCTGGCTCTCATTCTGTTACAGAGGAAAATCTCTaGAAGAAATTAGGTTCATGC | + |
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Preference number: 2 (lower is better) Translates to: KCHFLESSVIKASGSHSVTEENL*KKLGSC Trigger: GCATGAACCTAATTTCTTTCAGAGATTTTCCTCTGT...AACAGAATGAGAGCCAGATGCTTTAATTACGCTGCTTTCTAGAAAATGACATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR-3UTR GCA 90 bp | ATAAGCTTTTATAATTCACTATTGCCTATGCTAGCAACAGTTTCTGACAGGACCAAGAATGTGAATGAGTaGAAGATTTTATGGACACTG | + |
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Preference number: 2 (lower is better) Translates to: ISFYNSLLPMLATVSDRTKNVNE*KILWTL Trigger: CAGTGTCCATAAAATCTTGCACTCATTCACATTCTT...GGTCCTGTCAGAAACTGTTGCTAGCATAGGCAATAGTGAATTATAAAAGCTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR-3UTR CCA 90 bp | AAATGTCATTTTCTAGAAAGCAGCGTAATTAAAGCATCTGGCTCTCATTCTGTTTGTGTGTGCTCTTACTaGAAATCAGAAAATATGTTC | + |
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Preference number: 2 (lower is better) Translates to: KCHFLESSVIKASGSHSVCVCSY*KSENMF Trigger: GAACATATTTTCTGATTTCCAGTAAGAGCACACACA...AACAGAATGAGAGCCAGATGCTTTAATTACGCTGCTTTCTAGAAAATGACATTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR GCA 72 bp | GATCTTGTGAAGATTATATGCCCCTGTAGAGGGGAATaGCAGGGTCTGGAAGCAGGAGTGGGTGGGTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: DLVKIICPCRGE*QGLEAGVGGLG Trigger: CCCCAACCCACCCACTCCTGCTTCCAGACCCTGGCATTCCCCTCTACAGGGGCATATAATCTTCACAAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR GCA 72 bp | TTGAGAGGAGAGGCCCTTGATCTTGTGAAGATTATATaGCCCTGTAGAGGGGAATGCCAGGGTCTGGAAGCA | + |
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Preference number: 3 (lower is better) Translates to: LRGEALDLVKII*PCRGECQGLEA Trigger: TGCTTCCAGACCCTGGCATTCCCCTCTACAGGGGCATATAATCTTCACAAGATCAAGGGCCTCTCCTCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR GCA 72 bp | GTGTCTCTCCCACTGATGCTAGACCAGGCAGTCTTATaGTGCATATTTGTTGGGGGCTTCACATCAGCTAGT | + |
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Preference number: 3 (lower is better) Translates to: VSLPLMLDQAVL*CIFVGGFTSAS Trigger: ACTAGCTGATGTGAAGCCCCCAACAAATATGCAGCATAAGACTGCCTGGTCTAGCATCAGTGGGAGAGACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR CCA 72 bp | TTGTTGGGGGCTTCACATCAGCTAGTGTATGATCTCTaGTTAGAGGCTCAATGTCTGAGAGATCTTGCTTGT | + |
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Preference number: 3 (lower is better) Translates to: LLGASHQLVYDL*LEAQCLRDLAC Trigger: ACAAGCAAGATCTCTCAGACATTGAGCCTCTAACCAGAGATCATACACTAGCTGATGTGAAGCCCCCAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR-3UTR CAA 90 bp | AAATGTCATTTTCTAGAAAGCAGCGTAATTAAAGCATCTGGCTCTCATTCTGTTTATCCCCCTCCTGGTTaGCCCCCTGACTCTTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: KCHFLESSVIKASGSHSVYPPPG*PPDSSS Trigger: TGAGGAAGAGTCAGGGGGCAAACCAGGAGGGGGATA...AACAGAATGAGAGCCAGATGCTTTAATTACGCTGCTTTCTAGAAAATGACATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR GCA 72 bp | GAACTAACCAGTACTCCCAGAGCTTATGTGTTTAGCTaGATATGTAGCAGAAGATGGGATACTCTACCATCA | + |
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Preference number: 3 (lower is better) Translates to: ELTSTPRAYVFS*ICSRRWDTLPS Trigger: TGATGGTAGAGTATCCCATCTTCTGCTACATATGCAGCTAAACACATAAGCTCTGGGAGTACTGGTTAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR-3UTR CAA 90 bp | ATAAGCTTTTATAATTCACTATTGCCTATGCTAGCAACAGTTTCTGACAGGACCGATACTCTACCATCATaGAGAGGAGAGGCCCTTGAT | + |
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Preference number: 3 (lower is better) Translates to: ISFYNSLLPMLATVSDRTDTLPS*RGEALD Trigger: ATCAAGGGCCTCTCCTCTCAATGATGGTAGAGTATC...GGTCCTGTCAGAAACTGTTGCTAGCATAGGCAATAGTGAATTATAAAAGCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR-3UTR CAA 90 bp | AAATGTCATTTTCTAGAAAGCAGCGTAATTAAAGCATCTGGCTCTCATTCTGTTCCTTATCAACATTTTTaGGCAGTTACCAGAGGGCAA | + |
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Preference number: 3 (lower is better) Translates to: KCHFLESSVIKASGSHSVPYQHF*AVTRGQ Trigger: TTGCCCTCTGGTAACTGCCAAAAAATGTTGATAAGG...AACAGAATGAGAGCCAGATGCTTTAATTACGCTGCTTTCTAGAAAATGACATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| 3UTR TCA 72 bp | GAGTTTAGTTCTCTGAGAGAAAATGAAGAATGTGAATaGGTGCAAGATTTTATGGACACTGTAGGGAAGTTC | + |
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Preference number: 3 (lower is better) Translates to: EFSSLRENEECE*VQDFMDTVGKF Trigger: GAACTTCCCTACAGTGTCCATAAAATCTTGCACTCATTCACATTCTTCATTTTCTCTCAGAGAACTAAACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS-3UTR GCA 90 bp | AAATGTCATTTTCTAGAAAGCAGCGTAATTAAAGCATCTGGCTCTCATTCTGTTAGAGAAGCTTCCAAGTaGCAGGCAGGCCAAGTATCC | + |
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Preference number: 4 (lower is better) Translates to: KCHFLESSVIKASGSHSVREASK*QAGQVS Trigger: GGATACTTGGCCTGCCTGGCACTTGGAAGCTTCTCT...AACAGAATGAGAGCCAGATGCTTTAATTACGCTGCTTTCTAGAAAATGACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS-3UTR GCA 90 bp | ATAAGCTTTTATAATTCACTATTGCCTATGCTAGCAACAGTTTCTGACAGGACCGACTACAATCAGCACTaGACACTGAGGAAGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: ISFYNSLLPMLATVSDRTDYNQH*TLRKAS Trigger: AGATGCCTTCCTCAGTGTGCAGTGCTGATTGTAGTC...GGTCCTGTCAGAAACTGTTGCTAGCATAGGCAATAGTGAATTATAAAAGCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS-3UTR CCA 90 bp | ATCAGAACTGCACACAGAGGAAAATCTCTGAAAGAAATTAGGTTCATGCAAATGTCCTTGGTCATCATCTaGGATGACAAGGCCAATCCA | + |
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Preference number: 4 (lower is better) Translates to: IRTAHRGKSLKEIRFMQMSLVII*DDKANP Trigger: TGGATTGGCCTTGTCATCCCAGATGATGACCAAGGA...CATTTGCATGAACCTAATTTCTTTCAGAGATTTTCCTCTGTGTGCAGTTCTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS-3UTR TCA 90 bp | AAATGTCATTTTCTAGAAAGCAGCGTAATTAAAGCATCTGGCTCTCATTCTGTTATCAGCACTGCACACTaGGGAAGGCATCTTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KCHFLESSVIKASGSHSVISTAH*GRHLSS Trigger: AGAAGAAAGATGCCTTCCTCAGTGTGCAGTGCTGAT...AACAGAATGAGAGCCAGATGCTTTAATTACGCTGCTTTCTAGAAAATGACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS-3UTR TCA 90 bp | ATAAGCTTTTATAATTCACTATTGCCTATGCTAGCAACAGTTTCTGACAGGACCATGTCTACATATAAGTaGGAGTGTCGTCCATGTGGT | + |
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Preference number: 4 (lower is better) Translates to: ISFYNSLLPMLATVSDRTMSTYK*ECRPCG Trigger: ACCACATGGACGACACTCTCACTTATATGTAGACAT...GGTCCTGTCAGAAACTGTTGCTAGCATAGGCAATAGTGAATTATAAAAGCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS-3UTR CCA 90 bp | ATCAGAACTGCACACAGAGGAAAATCTCTGAAAGAAATTAGGTTCATGCAAATGAGAAATTGGTTTCCTTaGTCATCATCTGGGATGACA | + |
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Preference number: 4 (lower is better) Translates to: IRTAHRGKSLKEIRFMQMRNWFP*SSSGMT Trigger: TGTCATCCCAGATGATGACCAAGGAAACCAATTTCT...CATTTGCATGAACCTAATTTCTTTCAGAGATTTTCCTCTGTGTGCAGTTCTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS-3UTR CCA 90 bp | ATCAGAACTGCACACAGAGGAAAATCTCTGAAAGAAATTAGGTTCATGCAAATGATGATAATGTGGCCATaGAGAGTGTGTTCATCAATA | + |
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Preference number: 4 (lower is better) Translates to: IRTAHRGKSLKEIRFMQMMIMWP*RVCSSI Trigger: TATTGATGAACACACTCTCCATGGCCACATTATCAT...CATTTGCATGAACCTAATTTCTTTCAGAGATTTTCCTCTGTGTGCAGTTCTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS-3UTR CAA 90 bp | GGGCCCCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGATCTGCAGCAGTAACTGAGCCCTaGTTGCACACAATGATAATG | + |
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Preference number: 5 (lower is better) Translates to: GPPMKELEKVPKELKGSAAVTEP*LHTMIM Trigger: CATTATCATTGTGTGCAACAAGGGCTCAGTTACTGC...TGCAGATCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTTCATTGGGGGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS TCA 90 bp | TGCAAACAAAACAGCAGGCTGCCATTCCCTCCTTCCATAATCTTCTaGATCCAGGACTACAATCAGCACTGCACACTGAGGAAGGCATCT | + |
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Preference number: 5 (lower is better) Translates to: CKQNSRLPFPPSIIF*IQDYNQHCTLRKAS Trigger: AGATGCCTTCCTCAGTGTGCAGTGCTGATTGTAGTCCTGGATTCAGAAGATTATGGAAGGAGGGAATGGCAGCCTGCTGTTTTGTTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS-3UTR CAA 90 bp | GGGCCCCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGATCTGCATTCTGTGTTGGCATATaGGTATTCTGGACAATTCAT | + |
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Preference number: 5 (lower is better) Translates to: GPPMKELEKVPKELKGSAFCVGI*VFWTIH Trigger: ATGAATTGTCCAGAATACCAATATGCCAACACAGAA...TGCAGATCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTTCATTGGGGGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS CCA 90 bp | TACAATCAGCACTGCACACTGAGGAAGGCATCTTTCTTCTTCCTGTaGCCAACTCAATCATGTCTACATATAAGTGAGAGTGTCGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: YNQHCTLRKASFFFL*PTQSCLHISESVVH Trigger: ATGGACGACACTCTCACTTATATGTAGACATGATTGAGTTGGCCACAGGAAGAAGAAAGATGCCTTCCTCAGTGTGCAGTGCTGATTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS CCA 90 bp | AATGCAGTAACTGAGCCCTTGTTGCACACAATGATAATGTGGCCATaGAGAGTGTGTTCATCAATATCAACAAAGGGAGGAGAAACTGCT | + |
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Preference number: 5 (lower is better) Translates to: NAVTEPLLHTMIMWP*RVCSSISTKGGETA Trigger: AGCAGTTTCTCCTCCCTTTGTTGATATTGATGAACACACTCTCCATGGCCACATTATCATTGTGTGCAACAAGGGCTCAGTTACTGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS-3UTR CAA 90 bp | AAATGTCATTTTCTAGAAAGCAGCGTAATTAAAGCATCTGGCTCTCATTCTGTTGTAACTGAGCCCTTGTaGCACACAATGATAATGTGG | + |
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Preference number: 5 (lower is better) Translates to: KCHFLESSVIKASGSHSVVTEPL*HTMIMW Trigger: CCACATTATCATTGTGTGCAACAAGGGCTCAGTTAC...AACAGAATGAGAGCCAGATGCTTTAATTACGCTGCTTTCTAGAAAATGACATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS TCA 90 bp | TTCTGTTCTGTGTTGGCATATTGGTATTCTGGACAATTCATGCATTaGTCCATATTTGTCTCATTAGAAATTTCATTTTCAGGGCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: FCSVLAYWYSGQFMH*SIFVSLEISFSGQG Trigger: CCCCTGCCCTGAAAATGAAATTTCTAATGAGACAAATATGGATCAATGCATGAATTGTCCAGAATACCAATATGCCAACACAGAACAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS-3UTR CAA 90 bp | AAATGTCATTTTCTAGAAAGCAGCGTAATTAAAGCATCTGGCTCTCATTCTGTTAAGAAATTGGTTTCCTaGGTCATCATCTGGGATGAC | + |
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Preference number: 5 (lower is better) Translates to: KCHFLESSVIKASGSHSVKKLVS*VIIWDD Trigger: GTCATCCCAGATGATGACCAAGGAAACCAATTTCTT...AACAGAATGAGAGCCAGATGCTTTAATTACGCTGCTTTCTAGAAAATGACATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS CAA 72 bp | TCCTTTTCCATTGTCTATTGCCTGATTATCAGCCTGTaGCAGATTCATCTCATGGAGGGCATGGGCTATGGC | + |
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Preference number: 6 (lower is better) Translates to: SFSIVYCLIISL*QIHLMEGMGYG Trigger: GCCATAGCCCATGCCCTCCATGAGATGAATCTGCAACAGGCTGATAATCAGGCAATAGACAATGGAAAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS CAA 72 bp | TGTGTCCTTTGGGGCCATCTGATAGAGATAGGGATATaGTTCATCATCACTGAAGATGGAGTGGAAAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: CVLWGHLIEIGI*FIITEDGVERS Trigger: GGACCTTTCCACTCCATCTTCAGTGATGATGAACAATATCCCTATCTCTATCAGATGGCCCCAAAGGACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS CCA 72 bp | CACTGCACACTGAGGAAGGCATCTTTCTTCTTCCTGTaGCCAACTCAATCATGTCTACATATAAGTGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: HCTLRKASFFFL*PTQSCLHISES Trigger: ACTCTCACTTATATGTAGACATGATTGAGTTGGCCACAGGAAGAAGAAAGATGCCTTCCTCAGTGTGCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS CCA 72 bp | CTCTGTTTCTTCAACTCTAAAAGAAATTGGTTTCCTTaGTCATCATCTGGGATGACAAGGCCAATCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LCFFNSKRNWFP*SSSGMTRPIQF Trigger: GAACTGGATTGGCCTTGTCATCCCAGATGATGACCAAGGAAACCAATTTCTTTTAGAGTTGAAGAAACAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS CAA 90 bp | GTTCTGTTCTGTGTTGGCATATTGGTATTCTGGACAATTCATGCATaGATCCATATTTGTCTCATTAGAAATTTCATTTTCAGGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: VLFCVGILVFWTIHA*IHICLIRNFIFRAG Trigger: CCCTGCCCTGAAAATGAAATTTCTAATGAGACAAATATGGATCAATGCATGAATTGTCCAGAATACCAATATGCCAACACAGAACAGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS CAA 72 bp | GTGAACAATGTCATATTCATCCTGCATTATTACTCTTaGCTTCATAAACACTTTGTCCCCAGGAGGATTAGT | + |
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Preference number: 6 (lower is better) Translates to: VNNVIFILHYYS*LHKHFVPRRIS Trigger: ACTAATCCTCCTGGGGACAAAGTGTTTATGAAGCAAAGAGTAATAATGCAGGATGAATATGACATTGTTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS CAA 90 bp | GGTGACACCTTTCTGAATACATTTGTTCTGTTCTGTGTTGGCATATaGGTATTCTGGACAATTCATGCATTGATCCATATTTGTCTCATT | + |
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Preference number: 6 (lower is better) Translates to: GDTFLNTFVLFCVGI*VFWTIHALIHICLI Trigger: AATGAGACAAATATGGATCAATGCATGAATTGTCCAGAATACCAATATGCCAACACAGAACAGAACAAATGTATTCAGAAAGGTGTCACC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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| CDS TCA 72 bp | TCTTTTGGGTCGAATTTCTCTCTGGTCTCGTTAAAATaGTATAAATCTTGGGTACAAATATACATCCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: SFGSNFSLVSLK*YKSWVQIYIQG Trigger: TCCTTGGATGTATATTTGTACCCAAGATTTATATCATTTTAACGAGACCAGAGAGAAATTCGACCCAAAAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164845.4 |
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