Pregenerated sensors for VMN2R42 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070844Ensembl transcript IDs: ENSMUST00000086282.13, ENSMUST00000142934.3, ENSMUST00000146278.9, ENSMUST00000233668.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCACTGACTCTTCCTCATCTAACAACTCCTCTGCCATCTCCAAGATaGTATCCCTACATCCCCAATGCCCAGCACTTCCCAATCCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: PLTLPHLTTPLPSPR*YPYIPNAQHFPIPG Trigger: CCCAGGGATTGGGAAGTGCTGGGCATTGGGGATGTAGGGATATCATCTTGGAGATGGCAGAGGAGTTGTTAGATGAGGAAGAGTCAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| 3UTR TCA 90 bp | TGCCAGGCAGGCCAAGTATCCAAGGACACAGTAGAATGCAGTAACTaGGCCCTTGTTGCACACAATGATGATGTGGCCATGCTGAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: CQAGQVSKDTVECSN*ALVAHNDDVAMLRV Trigger: CACTCTCAGCATGGCCACATCATCATTGTGTGCAACAAGGGCTCAGTTACTGCATTCTACTGTGTCCTTGGATACTTGGCCTGCCTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
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| 3UTR GCA 90 bp | ATCAGGCAGATTCTTGGCCAAGAAAGCCAAAGTGAAGCTTCCCAGTaGCAGGCAGGCCAAGTATCCAAGGACACAGTAGAATGCAGTAAC | + |
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Preference number: 1 (lower is better) Translates to: IRQILGQESQSEASQ*QAGQVSKDTVECSN Trigger: GTTACTGCATTCTACTGTGTCCTTGGATACTTGGCCTGCCTGGCACTGGGAAGCTTCACTTTGGCTTTCTTGGCCAAGAATCTGCCTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
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| 3UTR TCA 90 bp | GCAGTAACTGAGCCCTTGTTGCACACAATGATGATGTGGCCATGCTaGGAGTGTTCATCAATATCAACAAAGGGAGGAGAGACTGCTAGC | + |
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Preference number: 1 (lower is better) Translates to: AVTEPLLHTMMMWPC*ECSSISTKGGETAS Trigger: GCTAGCAGTCTCTCCTCCCTTTGTTGATATTGATGAACACTCTCAGCATGGCCACATCATCATTGTGTGCAACAAGGGCTCAGTTACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
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| 3UTR CCA 90 bp | GGTGCATATTTGTTGGGGGCTTCACATCAGCTTGTGTATGATCTCTaGTTAGAGGCTCAGTGTCTGAGAGATCTTGCTTGTCCAGGTTTG | + |
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Preference number: 1 (lower is better) Translates to: GAYLLGASHQLVYDL*LEAQCLRDLACPGL Trigger: CAAACCTGGACAAGCAAGATCTCTCAGACACTGAGCCTCTAACCAGAGATCATACACAAGCTGATGTGAAGCCCCCAACAAATATGCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| 3UTR CCA 90 bp | TACAATCTGCACTGCACACAGAGGATGGCATCTTTCTTCTTCCTGTaGCCAACTCAATCATGTCTACGTATAAGTGAGAGTGTCGACCAT | + |
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Preference number: 1 (lower is better) Translates to: YNLHCTQRMASFFFL*PTQSCLRISESVDH Trigger: ATGGTCGACACTCTCACTTATACGTAGACATGATTGAGTTGGCCACAGGAAGAAGAAAGATGCCATCCTCTGTGTGCAGTGCAGATTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233668.2 |
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| 3UTR TCA 90 bp | TTCTGTTCTGTGTTGGCATATTGGTATTCTGGACAATTCACGCATTaGTCCATATTTGTCTCATTAGAAATTTCATTTTCAGGGCAGGGG | + |
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Preference number: 1 (lower is better) Translates to: FCSVLAYWYSGQFTH*SIFVSLEISFSGQG Trigger: CCCCTGCCCTGAAAATGAAATTTCTAATGAGACAAATATGGATCAATGCGTGAATTGTCCAGAATACCAATATGCCAACACAGAACAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233668.2 |
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| 3UTR TCA 90 bp | CCTAACTTCATCTTAATCCCAAGGTGTTGTGAGAGATTCGCAAAGTaGACAATGTCATATTCATCCTGCATTATTACTCTTTGCTTCATA | + |
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Preference number: 1 (lower is better) Translates to: PNFILIPRCCERFAK*TMSYSSCIITLCFI Trigger: TATGAAGCAAAGAGTAATAATGCAGGATGAATATGACATTGTTCACTTTGCGAATCTCTCACAACACCTTGGGATTAAGATGAAGTTAGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233668.2 |
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| 3UTR-3UTR TCA 90 bp | TATGCCCCAGTAGAGGGGAATGCCAGGGTCTGGAAGCAGGAGTGGGTTGGTTGGAAAGTACCACAGCTGTaGATGCAGAGAAGCAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: YAPVEGNARVWKQEWVGWKVPQL*MQRSRR Trigger: CCTTCTGCTTCTCTGCATTCACAGCTGTGGTACTTT...CCAACCAACCCACTCCTGCTTCCAGACCCTGGCATTCCCCTCTACTGGGGCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
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| 3UTR-3UTR TCA 90 bp | TATGCCCCAGTAGAGGGGAATGCCAGGGTCTGGAAGCAGGAGTGGGTTGGTTGGAAGCTAGAACCACAGTaGCTGTTTTGGCCAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: YAPVEGNARVWKQEWVGWKLEPQ*LFWPEL Trigger: CAGTTCTGGCCAAAACAGTCACTGTGGTTCTAGCTT...CCAACCAACCCACTCCTGCTTCCAGACCCTGGCATTCCCCTCTACTGGGGCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCCCTCCTGGTTTGCCCCACTGACTCTTCCTCATCTAACAACTCCTCTGCCACAGGCAGTCTTATGGTaGATATTTGTTGGGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: SPSWFAPLTLPHLTTPLPQAVLW*IFVGGF Trigger: GAAGCCCCCAACAAATATGCACCATAAGACTGCCTG...TGGCAGAGGAGTTGTTAGATGAGGAAGAGTCAGTGGGGCAAACCAGGAGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCACTTCCCAATCCCTGGGGACTTAAGTCTCTCTGGGGTTAGGTGTGTCTCCGCTGTAAGACACAGATaGCTTTGTTTGGAAGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: QHFPIPGDLSLSGVRCVSAVRHR*LCLEGQ Trigger: TTGGCCTTCCAAACAAAGTCATCTGTGTCTTACAGC...GGAGACACACCTAACCCCAGAGAGACTTAAGTCCCCAGGGATTGGGAAGTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
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| 3UTR-3UTR GCA 90 bp | CAGATTCTTGGCCAAGAAAGCCAAAGTGAAGCTTCCCAGTGCCAGGCAGGCCAATACCACAGCTGTGAATaGAGAGAAGCAGAAGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: QILGQESQSEASQCQAGQYHSCE*REAEGH Trigger: ATGGCCTTCTGCTTCTCTGCATTCACAGCTGTGGTA...TTGGCCTGCCTGGCACTGGGAAGCTTCACTTTGGCTTTCTTGGCCAAGAATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGAGCCTCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAACAAATGGGATATCCCTACATCCCCAATaGCCAGCACTTCCCAATCCC | + |
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Preference number: 2 (lower is better) Translates to: HRASNEGARESTQGTNGISLHPQ*PALPNP Trigger: GGGATTGGGAAGTGCTGGGCATTGGGGATGTAGGGA...TATCCCATTTGTTCCTTGGGTACTTTCTCTAGCTCCTTCATTGGAGGCTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| 3UTR-3UTR GCA 90 bp | CAACAAAGGGAGGAGAGACTGCTAGCCAGATTGCACACAGAACACATTGGAGTAGTGGACCCACCAAAATaGACCAGAGACTTGGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: QQREERLLARLHTEHIGVVDPPK*TRDLGG Trigger: ACCTCCCAAGTCTCTGGTGCATTTTGGTGGGTCCAC...TACTCCAATGTGTTCTGTGTGCAATCTGGCTAGCAGTCTCTCCTCCCTTTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142934.3 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTAGAGAAAGTACCCAAGGAACAAATGGGATATGCAACCCTATAGGAAGAGTCTGGAAGCAGGAGTaGGTTGGTTGGGGAACAGGG | + |
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Preference number: 2 (lower is better) Translates to: GARESTQGTNGICNPIGRVWKQE*VGWGTG Trigger: CCCTGTTCCCCAACCAACCCACTCCTGCTTCCAGAC...TCTTCCTATAGGGTTGCATATCCCATTTGTTCCTTGGGTACTTTCTCTAGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| 3UTR-3UTR CCA 90 bp | AGAACCACAGTGACTGTTTTGGCCAGAACTGTGGAAACAGCCACAGTGAATACAGGTTTGTGGAGTGTGTaGGGTGAGAGGGGTACCAAG | + |
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Preference number: 2 (lower is better) Translates to: RTTVTVLARTVETATVNTGLWSV*GERGTK Trigger: CTTGGTACCCCTCTCACCCCACACACTCCACAAACC...TGTATTCACTGTGGCTGTTTCCACAGTTCTGGCCAAAACAGTCACTGTGGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142934.3 |
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| 3UTR CAA 90 bp | CTCTGGTTAGAGGCTCAGTGTCTGAGAGATCTTGCTTGTCCAGGTTaGTTGAGAATGCTGGTCACCCTCCTCCTCAGCTTCTTCCAAATA | + |
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Preference number: 2 (lower is better) Translates to: LWLEAQCLRDLACPG*LRMLVTLLLSFFQI Trigger: TATTTGGAAGAAGCTGAGGAGGAGGGTGACCAGCATTCTCAACAAACCTGGACAAGCAAGATCTCTCAGACACTGAGCCTCTAACCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCCCTCCTGGTTTGCCCCACTGACTCTTCCTCATCTAACAACTCCTCTGCCAGAATCCCTGGGCTTCTaGTCATTGTTGGATATAATA | + |
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Preference number: 2 (lower is better) Translates to: SPSWFAPLTLPHLTTPLPESLGF*SLLDII Trigger: TATTATATCCAACAATGATCAGAAGCCCAGGGATTC...TGGCAGAGGAGTTGTTAGATGAGGAAGAGTCAGTGGGGCAAACCAGGAGGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCACTTCCCAATCCCTGGGGACTTAAGTCTCTCTGGGGTTAGGTGTGTCTCCCATAGCTTAGGAAGGTaGCACCTTTCTGAATACATT | + |
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Preference number: 2 (lower is better) Translates to: QHFPIPGDLSLSGVRCVSHSLGR*HLSEYI Trigger: AATGTATTCAGAAAGGTGTCACCTTCCTAAGCTATG...GGAGACACACCTAACCCCAGAGAGACTTAAGTCCCCAGGGATTGGGAAGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
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| 3UTR-3UTR TCA 90 bp | ATTATATGCCCCAGTAGAGGGGAATGCCAGGGTCTGGAAGCAGGAGTGGGTTGGCATAGCTTAGGAAGGTaGCACCTTTCTGAATACATT | + |
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Preference number: 2 (lower is better) Translates to: IICPSRGECQGLEAGVGWHSLGR*HLSEYI Trigger: AATGTATTCAGAAAGGTGTCACCTTCCTAAGCTATG...CCAACCCACTCCTGCTTCCAGACCCTGGCATTCCCCTCTACTGGGGCATATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTCTTCCAAATATTCCCAATTCAGCCACAGAATCCCTGGGCTTCTGATCATTCCAAGAAAGCCAAAGTaGAGCTTCCCAGTGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: ASSKYSQFSHRIPGLLIIPRKPK*SFPVPG Trigger: GCCTGGCACTGGGAAGCTTCACTTTGGCTTTCTTGG...AATGATCAGAAGCCCAGGGATTCTGTGGCTGAATTGGGAATATTTGGAAGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGTTTGCCCCACTGACTCTTCCTCATCTAACAACTCCTCTGCCATCTCCAGTGTCTGAGAGATCTTaGTTGTCCAGGTTTGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: SWFAPLTLPHLTTPLPSPVSERS*LSRFVE Trigger: CTCAACAAACCTGGACAAGCAAGATCTCTCAGACAC...TGGAGATGGCAGAGGAGTTGTTAGATGAGGAAGAGTCAGTGGGGCAAACCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTTCCAAATATTCCCAATTCAGCCACAGAATCCCTGGGCTTCTGATCATTTCCCTACATCCCCAATaGCCAGCACTTCCCAATCCC | + |
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Preference number: 2 (lower is better) Translates to: ASSKYSQFSHRIPGLLIISLHPQ*PALPNP Trigger: GGGATTGGGAAGTGCTGGGCATTGGGGATGTAGGGA...AATGATCAGAAGCCCAGGGATTCTGTGGCTGAATTGGGAATATTTGGAAGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTCCAGGACCTCAATCAGAACTGCACACAAAGGGAAATCTCTGAAAGAAATTCCCAGTAGAGGGGAATaGCAGGGTCTGGAAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: ESRTSIRTAHKGKSLKEIPSRGE*QGLEAG Trigger: TCCTGCTTCCAGACCCTGGCATTCCCCTCTACTGGG...AATTTCTTTCAGAGATTTCCCTTTGTGTGCAGTTCTGATTGAGGTCCTGGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| 3UTR-3UTR CCA 90 bp | ATTATATGCCCCAGTAGAGGGGAATGCCAGGGTCTGGAAGCAGGAGTGGGTTGGGAGTGCAAGATTTTATaGACACTGTACGGAAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: IICPSRGECQGLEAGVGWECKIL*TLYGSS Trigger: TGAACTTCCGTACAGTGTCCATAAAATCTTGCACTC...CCAACCCACTCCTGCTTCCAGACCCTGGCATTCCCCTCTACTGGGGCATATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| 3UTR-3UTR CCA 90 bp | CAGATTCTTGGCCAAGAAAGCCAAAGTGAAGCTTCCCAGTGCCAGGCAGGCCAATCTCAATCTTCTTCCTaGGACTGTGACTTTGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: QILGQESQSEASQCQAGQSQSSS*DCDFES Trigger: GCTTTCAAAGTCACAGTCCCAGGAAGAAGATTGAGA...TTGGCCTGCCTGGCACTGGGAAGCTTCACTTTGGCTTTCTTGGCCAAGAATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
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| 3UTR-3UTR CCA 90 bp | TATGCCCCAGTAGAGGGGAATGCCAGGGTCTGGAAGCAGGAGTGGGTTGGTTGGTTTTCTCTGATCTTTTaGGTAGAATTTCTCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: YAPVEGNARVWKQEWVGWFSLIF*VEFLSG Trigger: ACCAGAGAGAAATTCTACCCAAAAGATCAGAGAAAA...CCAACCAACCCACTCCTGCTTCCAGACCCTGGCATTCCCCTCTACTGGGGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
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| 3UTR CAA 90 bp | TGGTTAGAGGCTCAGTGTCTGAGAGATCTTGCTTGTCCAGGTTTGTaGAGAATGCTGGTCACCCTCCTCCTCAGCTTCTTCCAAATATTC | + |
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Preference number: 2 (lower is better) Translates to: WLEAQCLRDLACPGL*RMLVTLLLSFFQIF Trigger: GAATATTTGGAAGAAGCTGAGGAGGAGGGTGACCAGCATTCTCAACAAACCTGGACAAGCAAGATCTCTCAGACACTGAGCCTCTAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| 3UTR-3UTR GCA 90 bp | ATCATTGAGTATCTTGATCTTGTGAAGATTATATGCCCCAGTAGAGGGGAATGCCCCAGTAGAGGGGAATaGCAGGGTCTGGAAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: IIEYLDLVKIICPSRGECPSRGE*QGLEAG Trigger: TCCTGCTTCCAGACCCTGGCATTCCCCTCTACTGGG...GCATTCCCCTCTACTGGGGCATATAATCTTCACAAGATCAAGATACTCAATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTCTTCCAAATATTCCCAATTCAGCCACAGAATCCCTGGGCTTCTGATCATTTGGGGAACAGGGTGGTaGGAGTATATAGGGGATAGT | + |
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Preference number: 2 (lower is better) Translates to: ASSKYSQFSHRIPGLLIIWGTGW*EYIGDS Trigger: ACTATCCCCTATATACTCTCACCACCCTGTTCCCCA...AATGATCAGAAGCCCAGGGATTCTGTGGCTGAATTGGGAATATTTGGAAGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTCCAGGACCTCAATCAGAACTGCACACAAAGGGAAATCTCTGAAAGAAATTTATAGCTGTCTCTTGTaGGGCTATGCCAGTGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: ESRTSIRTAHKGKSLKEIYSCLL*GYASAW Trigger: CCAGGCACTGGCATAGCCTCACAAGAGACAGCTATA...AATTTCTTTCAGAGATTTCCCTTTGTGTGCAGTTCTGATTGAGGTCCTGGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGTTTGCCCCACTGACTCTTCCTCATCTAACAACTCCTCTGCCATCTCCAGCTGAGAATGTAATATaGAGGATAATGCTTCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: SWFAPLTLPHLTTPLPSPAENVI*RIMLLS Trigger: GCTCAGAAGCATTATCCTTCATATTACATTCTCAGC...TGGAGATGGCAGAGGAGTTGTTAGATGAGGAAGAGTCAGTGGGGCAAACCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142934.3 |
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| 3UTR-3UTR TCA 90 bp | CTCCACAGCAACCATGTGTTTGCCCTTTGTGCTATGGTACACAGGGAGGAAGGTGTGGTAAATATGGGCTaGACTTTCCTAACTTCATCT | + |
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Preference number: 2 (lower is better) Translates to: LHSNHVFALCAMVHREEGVVNMG*TFLTSS Trigger: AGATGAAGTTAGGAAAGTTCAGCCCATATTTACCAC...ACCTTCCTCCCTGTGTACCATAGCACAAAGGGCAAACACATGGTTGCTGTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233668.2 |
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| 3UTR-3UTR GCA 90 bp | AGAACCACAGTGACTGTTTTGGCCAGAACTGTGGAAACAGCCACAGTGAATACACAGGCAGTCTTATGGTaGATATTTGTTGGGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: RTTVTVLARTVETATVNTQAVLW*IFVGGF Trigger: GAAGCCCCCAACAAATATGCACCATAAGACTGCCTG...TGTATTCACTGTGGCTGTTTCCACAGTTCTGGCCAAAACAGTCACTGTGGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
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| 3UTR-3UTR GCA 90 bp | ATCATTGAGTATCTTGATCTTGTGAAGATTATATGCCCCAGTAGAGGGGAATGCTCCCTACATCCCCAATaGCCAGCACTTCCCAATCCC | + |
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Preference number: 2 (lower is better) Translates to: IIEYLDLVKIICPSRGECSLHPQ*PALPNP Trigger: GGGATTGGGAAGTGCTGGGCATTGGGGATGTAGGGA...GCATTCCCCTCTACTGGGGCATATAATCTTCACAAGATCAAGATACTCAATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTAGAGAAAGTACCCAAGGAACAAATGGGATATGCAACCCTATAGGAAGATTAGAAAGGGGTTTGTaGAGTGTGTGGGGTGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: GARESTQGTNGICNPIGRLERGL*SVWGER Trigger: CCTCTCACCCCACACACTCCACAAACCCCTTTCTAA...TCTTCCTATAGGGTTGCATATCCCATTTGTTCCTTGGGTACTTTCTCTAGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142934.3 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTAGAGAAAGTACCCAAGGAACAAATGGGATATGCAACCCTATAGGAAGATTGCCCTTTGTGCTATaGTACACAGGGAGGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: GARESTQGTNGICNPIGRLPFVL*YTGRKV Trigger: CACCTTCCTCCCTGTGTACCATAGCACAAAGGGCAA...TCTTCCTATAGGGTTGCATATCCCATTTGTTCCTTGGGTACTTTCTCTAGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
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| 3UTR-3UTR TCA 90 bp | GATATGATACTTCCTTTTATCACTAGAGCAACCAGTGAGAGTGATTCTAAAACTGTGGAGTGTGTGGGGTaGGAGGGGTACCAAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: DMILPFITRATSESDSKTVECVG*EGYQAL Trigger: CAGTGCTTGGTACCCCTCTCACCCCACACACTCCAC...AGTTTTAGAATCACTCTCACTGGTTGCTCTAGTGATAAAAGGAAGTATCATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000142934.3 |
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| 3UTR-3UTR GCA 90 bp | ACCTCAATCAGAACTGCACACAAAGGGAAATCTCTGAAAGAAATTAGGTTCATGTCCCTACATCCCCAATaGCCAGCACTTCCCAATCCC | + |
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Preference number: 2 (lower is better) Translates to: TSIRTAHKGKSLKEIRFMSLHPQ*PALPNP Trigger: GGGATTGGGAAGTGCTGGGCATTGGGGATGTAGGGA...CATGAACCTAATTTCTTTCAGAGATTTCCCTTTGTGTGCAGTTCTGATTGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGAGCCTCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAACAAATGGGATACTTGTGAAGATTATATaGCCCAGTAGAGGGGAATGC | + |
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Preference number: 2 (lower is better) Translates to: HRASNEGARESTQGTNGILVKII*PSRGEC Trigger: GCATTCCCCTCTACTGGGGCATATAATCTTCACAAG...TATCCCATTTGTTCCTTGGGTACTTTCTCTAGCTCCTTCATTGGAGGCTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| 3UTR-3UTR CCA 90 bp | CAGATTCTTGGCCAAGAAAGCCAAAGTGAAGCTTCCCAGTGCCAGGCAGGCCAAACAGATGACTTTGTTTaGAAGGCCAATGAAGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: QILGQESQSEASQCQAGQTDDFV*KANEEK Trigger: TTTTTCTTCATTGGCCTTCCAAACAAAGTCATCTGT...TTGGCCTGCCTGGCACTGGGAAGCTTCACTTTGGCTTTCTTGGCCAAGAATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR CAA 90 bp | CTTCCTGGGACTGTGACTTTGAAAGCTAGAACCACAGTGACTGTTTaGGCCAGAACTGTGGAAACAGCCACAGTGAATACAATTCCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: LPGTVTLKARTTVTV*ARTVETATVNTIPN Trigger: ATTTGGAATTGTATTCACTGTGGCTGTTTCCACAGTTCTGGCCAAAACAGTCACTGTGGTTCTAGCTTTCAAAGTCACAGTCCCAGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGTACCCAAGGAACAAATGGGATATGCAACCCTATAGGAAGAACAACAATATATAGCTGTCTCTTGTaGGGCTATGCCAGTGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: ESTQGTNGICNPIGRTTIYSCLL*GYASAW Trigger: CCAGGCACTGGCATAGCCTCACAAGAGACAGCTATA...TATTGTTGTTCTTCCTATAGGGTTGCATATCCCATTTGTTCCTTGGGTACTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR TCA 90 bp | AATCTTGGGTACAAAAATACATCCAAGCATCCCTGCACTGGATGCCAAGATAGAAAAGTACCACAGCTGTaGATGCAGAGAAGCAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: NLGYKNTSKHPCTGCQDRKVPQL*MQRSRR Trigger: CCTTCTGCTTCTCTGCATTCACAGCTGTGGTACTTT...TCTATCTTGGCATCCAGTGCAGGGATGCTTGGATGTATTTTTGTACCCAAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAGAACAACAATATGAACCATCCAGTTCCCACAGAGCTCATGTGTTTAGCTGCGCTGTAAGACACAGATaGCTTTGTTTGGAAGGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: EEQQYEPSSSHRAHVFSCAVRHR*LCLEGQ Trigger: TTGGCCTTCCAAACAAAGTCATCTGTGTCTTACAGC...GCAGCTAAACACATGAGCTCTGTGGGAACTGGATGGTTCATATTGTTGTTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCTGGTTTGCCCCACTGACTCTTCCTCATCTAACAACTCCTCTGCCATCTCCAAAGAAAGTGAATGAGTaGAAGATTTTATGGACACTG | + |
|
Preference number: 2 (lower is better) Translates to: SWFAPLTLPHLTTPLPSPKKVNE*KILWTL Trigger: CAGTGTCCATAAAATCTTGCACTCATTCACTTTCTT...TGGAGATGGCAGAGGAGTTGTTAGATGAGGAAGAGTCAGTGGGGCAAACCAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCCACAGCAACCATGTGTTTGCCCTTTGTGCTATGGTACACAGGGAGGAAGGTAAGAAAGTGAATGAGTaGAAGATTTTATGGACACTG | + |
|
Preference number: 2 (lower is better) Translates to: LHSNHVFALCAMVHREEGKKVNE*KILWTL Trigger: CAGTGTCCATAAAATCTTGCACTCATTCACTTTCTT...ACCTTCCTCCCTGTGTACCATAGCACAAAGGGCAAACACATGGTTGCTGTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | CACAGAGCCTCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAACAAATGGGATAGACCTCAATCAGAACTaGACACAAAGGGAAATCTCT | + |
|
Preference number: 2 (lower is better) Translates to: HRASNEGARESTQGTNGIDLNQN*TQREIS Trigger: AGAGATTTCCCTTTGTGTGCAGTTCTGATTGAGGTC...TATCCCATTTGTTCCTTGGGTACTTTCTCTAGCTCCTTCATTGGAGGCTCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAATTAGGTTCATGCAAATGTCAGTAGTTTTACCTATCCCTTCCATAACTACACCCAGTAGAGGGGAATaGCAGGGTCTGGAAGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: EIRFMQMSVVLPIPSITTPSRGE*QGLEAG Trigger: TCCTGCTTCCAGACCCTGGCATTCCCCTCTACTGGG...TGTAGTTATGGAAGGGATAGGTAAAACTACTGACATTTGCATGAACCTAATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAGAACAACAATATGAACCATCCAGTTCCCACAGAGCTCATGTGTTTAGCTGCCTTGTGAAGATTATATaGCCCAGTAGAGGGGAATGC | + |
|
Preference number: 2 (lower is better) Translates to: EEQQYEPSSSHRAHVFSCLVKII*PSRGEC Trigger: GCATTCCCCTCTACTGGGGCATATAATCTTCACAAG...GCAGCTAAACACATGAGCTCTGTGGGAACTGGATGGTTCATATTGTTGTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTTCTTCCAAATATTCCCAATTCAGCCACAGAATCCCTGGGCTTCTGATCATTCTTGGCTTCATTGAATaGATCAGGCAGATTCTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: ASSKYSQFSHRIPGLLIILGFIE*IRQILG Trigger: GCCAAGAATCTGCCTGATGCATTCAATGAAGCCAAG...AATGATCAGAAGCCCAGGGATTCTGTGGCTGAATTGGGAATATTTGGAAGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR-3UTR TCA 90 bp | CACAGAGCCTCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAACAAATGGGATAGAATCCCTGGGCTTCTaGTCATTGTTGGATATAATA | + |
|
Preference number: 2 (lower is better) Translates to: HRASNEGARESTQGTNGIESLGF*SLLDII Trigger: TATTATATCCAACAATGATCAGAAGCCCAGGGATTC...TATCCCATTTGTTCCTTGGGTACTTTCTCTAGCTCCTTCATTGGAGGCTCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTTGCAACAATGCCATCTTCCACGAATTTTCAATGAGTCAAATGTGGATGTTATATAGCTGTCTCTTGTaGGGCTATGCCAGTGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LCNNAIFHEFSMSQMWMLYSCLL*GYASAW Trigger: CCAGGCACTGGCATAGCCTCACAAGAGACAGCTATA...TAACATCCACATTTGACTCATTGAAAATTCGTGGAAGATGGCATTGTTGCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | CTAGTAGTTATCCCCCTCCTGGTTTGCCCCACTGACTCTTCCTCATCTAACAACAAGAAAGTGAATGAGTaGAAGATTTTATGGACACTG | + |
|
Preference number: 2 (lower is better) Translates to: LVVIPLLVCPTDSSSSNNKKVNE*KILWTL Trigger: CAGTGTCCATAAAATCTTGCACTCATTCACTTTCTT...GTTGTTAGATGAGGAAGAGTCAGTGGGGCAAACCAGGAGGGGGATAACTACTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | GGAGCTAGAGAAAGTACCCAAGGAACAAATGGGATATGCAACCCTATAGGAAGAGACCTCAATCAGAACTaGACACAAAGGGAAATCTCT | + |
|
Preference number: 2 (lower is better) Translates to: GARESTQGTNGICNPIGRDLNQN*TQREIS Trigger: AGAGATTTCCCTTTGTGTGCAGTTCTGATTGAGGTC...TCTTCCTATAGGGTTGCATATCCCATTTGTTCCTTGGGTACTTTCTCTAGCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCATTGAGTATCTTGATCTTGTGAAGATTATATGCCCCAGTAGAGGGGAATGCTACCACAGCTGTGAATaGAGAGAAGCAGAAGGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: IIEYLDLVKIICPSRGECYHSCE*REAEGH Trigger: ATGGCCTTCTGCTTCTCTGCATTCACAGCTGTGGTA...GCATTCCCCTCTACTGGGGCATATAATCTTCACAAGATCAAGATACTCAATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCTCAATCAGAACTGCACACAAAGGGAAATCTCTGAAAGAAATTAGGTTCATGCAGGCAGTCTTATGGTaGATATTTGTTGGGGGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: TSIRTAHKGKSLKEIRFMQAVLW*IFVGGF Trigger: GAAGCCCCCAACAAATATGCACCATAAGACTGCCTG...CATGAACCTAATTTCTTTCAGAGATTTCCCTTTGTGTGCAGTTCTGATTGAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAGAACAACAATATGAACCATCCAGTTCCCACAGAGCTCATGTGTTTAGCTGCATAGGAGTGTCATGGTaGTTCACAAAGACACAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: EEQQYEPSSSHRAHVFSCIGVSW*FTKTQS Trigger: ACTTTGTGTCTTTGTGAAGCACCATGACACTCCTAT...GCAGCTAAACACATGAGCTCTGTGGGAACTGGATGGTTCATATTGTTGTTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCAACAATGCCATCTTCCACGAATTTTCAATGAGTCAAATGTGGATGTTAATATTTCAGGGCAGGGGCTaGAAACAAAACAGCAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: CNNAIFHEFSMSQMWMLIFQGRG*KQNSRL Trigger: CAGCCTGCTGTTTTGTTTGCAGCCCCTGCCCTGAAA...TATTAACATCCACATTTGACTCATTGAAAATTCGTGGAAGATGGCATTGTTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233668.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCTAGAGAAAGTACCCAAGGAACAAATGGGATATGCAACCCTATAGGAAGAGAGTGCAAGATTTTATaGACACTGTACGGAAGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: GARESTQGTNGICNPIGRECKIL*TLYGSS Trigger: TGAACTTCCGTACAGTGTCCATAAAATCTTGCACTC...TCTTCCTATAGGGTTGCATATCCCATTTGTTCCTTGGGTACTTTCTCTAGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAGAACAACAATATGAACCATCCAGTTCCCACAGAGCTCATGTGTTTAGCTGCTCTTTCTTCTTCCTGTaGCCAACTCAATCATGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: EEQQYEPSSSHRAHVFSCSFFFL*PTQSCL Trigger: TAGACATGATTGAGTTGGCCACAGGAAGAAGAAAGA...GCAGCTAAACACATGAGCTCTGTGGGAACTGGATGGTTCATATTGTTGTTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233668.2 |
||
| 3UTR-3UTR TCA 90 bp | CAACAATGCCATCTTCCACGAATTTTCAATGAGTCAAATGTGGATGTTAATAGATGGGGAACAGGGTGGTaGGAGTATATAGGGGATAGT | + |
|
Preference number: 2 (lower is better) Translates to: QQCHLPRIFNESNVDVNRWGTGW*EYIGDS Trigger: ACTATCCCCTATATACTCTCACCACCCTGTTCCCCA...TCTATTAACATCCACATTTGACTCATTGAAAATTCGTGGAAGATGGCATTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGTCCAGGACCTCAATCAGAACTGCACACAAAGGGAAATCTCTGAAAGAAATTGAGAGATTCGCAAAGTaGACAATGTCATATTCATCC | + |
|
Preference number: 2 (lower is better) Translates to: ESRTSIRTAHKGKSLKEIERFAK*TMSYSS Trigger: GGATGAATATGACATTGTTCACTTTGCGAATCTCTC...AATTTCTTTCAGAGATTTCCCTTTGTGTGCAGTTCTGATTGAGGTCCTGGACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTTCTTCCAAATATTCCCAATTCAGCCACAGAATCCCTGGGCTTCTGATCATTCTTTCTTTGCAACAATaGCATCTTCCACGAATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: ASSKYSQFSHRIPGLLIILSLQQ*HLPRIF Trigger: GAAAATTCGTGGAAGATGGCATTGTTGCAAAGAAAG...AATGATCAGAAGCCCAGGGATTCTGTGGCTGAATTGGGAATATTTGGAAGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAACCACAGTGACTGTTTTGGCCAGAACTGTGGAAACAGCCACAGTGAATACAATTCCAAATGTGATTTaGTGTAAGACACAGATGACT | + |
|
Preference number: 2 (lower is better) Translates to: RTTVTVLARTVETATVNTIPNVI*CKTQMT Trigger: AGTCATCTGTGTCTTACAGCAAATCACATTTGGAAT...TGTATTCACTGTGGCTGTTTCCACAGTTCTGGCCAAAACAGTCACTGTGGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCAACAATGCCATCTTCCACGAATTTTCAATGAGTCAAATGTGGATGTTAATACTGCCATCTCCAAGATaGTATCCCTACATCCCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: CNNAIFHEFSMSQMWMLILPSPR*YPYIPN Trigger: ATTGGGGATGTAGGGATATCATCTTGGAGATGGCAG...TATTAACATCCACATTTGACTCATTGAAAATTCGTGGAAGATGGCATTGTTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAGAACAACAATATGAACCATCCAGTTCCCACAGAGCTCATGTGTTTAGCTGCAAGAAAGTGAATGAGTaGAAGATTTTATGGACACTG | + |
|
Preference number: 2 (lower is better) Translates to: EEQQYEPSSSHRAHVFSCKKVNE*KILWTL Trigger: CAGTGTCCATAAAATCTTGCACTCATTCACTTTCTT...GCAGCTAAACACATGAGCTCTGTGGGAACTGGATGGTTCATATTGTTGTTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | GATATGATACTTCCTTTTATCACTAGAGCAACCAGTGAGAGTGATTCTAAAACTCAGGCAGTCTTATGGTaGATATTTGTTGGGGGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: DMILPFITRATSESDSKTQAVLW*IFVGGF Trigger: GAAGCCCCCAACAAATATGCACCATAAGACTGCCTG...AGTTTTAGAATCACTCTCACTGGTTGCTCTAGTGATAAAAGGAAGTATCATATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | AACAATATGAACCATCCAGTTCCCACAGAGCTCATGTGTTTAGCTGCATATGTAATAGGAGTGTCATGGTaGTTCACAAAGACACAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: NNMNHPVPTELMCLAAYVIGVSW*FTKTQS Trigger: ACTTTGTGTCTTTGTGAAGCACCATGACACTCCTAT...TACATATGCAGCTAAACACATGAGCTCTGTGGGAACTGGATGGTTCATATTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCTCAATCAGAACTGCACACAAAGGGAAATCTCTGAAAGAAATTAGGTTCATGTCTCAATCTTCTTCCTaGGACTGTGACTTTGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: TSIRTAHKGKSLKEIRFMSQSSS*DCDFES Trigger: GCTTTCAAAGTCACAGTCCCAGGAAGAAGATTGAGA...CATGAACCTAATTTCTTTCAGAGATTTCCCTTTGTGTGCAGTTCTGATTGAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR CAA 90 bp | GTTCTGTTCTGTGTTGGCATATTGGTATTCTGGACAATTCACGCATaGATCCATATTTGTCTCATTAGAAATTTCATTTTCAGGGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: VLFCVGILVFWTIHA*IHICLIRNFIFRAG Trigger: CCCTGCCCTGAAAATGAAATTTCTAATGAGACAAATATGGATCAATGCGTGAATTGTCCAGAATACCAATATGCCAACACAGAACAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGTCCAGGACCTCAATCAGAACTGCACACAAAGGGAAATCTCTGAAAGAAATTTATCAAATCTTTCTTTaGAACAATGCCATCTTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: ESRTSIRTAHKGKSLKEIYQIFL*NNAIFH Trigger: GTGGAAGATGGCATTGTTGCAAAGAAAGATTTGATA...AATTTCTTTCAGAGATTTCCCTTTGTGTGCAGTTCTGATTGAGGTCCTGGACTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCTCAATCAGAACTGCACACAAAGGGAAATCTCTGAAAGAAATTAGGTTCATGGGAACAAATGGGATATaGAACCCTATAGGAAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: TSIRTAHKGKSLKEIRFMGTNGI*NPIGRT Trigger: TGTTCTTCCTATAGGGTTGCATATCCCATTTGTTCC...CATGAACCTAATTTCTTTCAGAGATTTCCCTTTGTGTGCAGTTCTGATTGAGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR CAA 90 bp | GGTGACACCTTTCTGAATACATTTGTTCTGTTCTGTGTTGGCATATaGGTATTCTGGACAATTCACGCATTGATCCATATTTGTCTCATT | + |
|
Preference number: 2 (lower is better) Translates to: GDTFLNTFVLFCVGI*VFWTIHALIHICLI Trigger: AATGAGACAAATATGGATCAATGCGTGAATTGTCCAGAATACCAATATGCCAACACAGAACAGAACAAATGTATTCAGAAAGGTGTCACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233668.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTTGCAACAATGCCATCTTCCACGAATTTTCAATGAGTCAAATGTGGATGTTAGAATCCCTGGGCTTCTaGTCATTGTTGGATATAATA | + |
|
Preference number: 2 (lower is better) Translates to: LCNNAIFHEFSMSQMWMLESLGF*SLLDII Trigger: TATTATATCCAACAATGATCAGAAGCCCAGGGATTC...TAACATCCACATTTGACTCATTGAAAATTCGTGGAAGATGGCATTGTTGCAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCTCAATCAGAACTGCACACAAAGGGAAATCTCTGAAAGAAATTAGGTTCATGAAGGTGACACCTTTCTaGATACATTTGTTCTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: TSIRTAHKGKSLKEIRFMKVTPF*IHLFCS Trigger: AGAACAGAACAAATGTATTCAGAAAGGTGTCACCTT...CATGAACCTAATTTCTTTCAGAGATTTCCCTTTGTGTGCAGTTCTGATTGAGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCAACAATGCCATCTTCCACGAATTTTCAATGAGTCAAATGTGGATGTTAATAAGAACTTGGCTTCATTaGATGCATCAGGCAGATTCT | + |
|
Preference number: 2 (lower is better) Translates to: CNNAIFHEFSMSQMWMLIRTWLH*MHQADS Trigger: AGAATCTGCCTGATGCATTCAATGAAGCCAAGTTCT...TATTAACATCCACATTTGACTCATTGAAAATTCGTGGAAGATGGCATTGTTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAATTAGGTTCATGCAAATGTCAGTAGTTTTACCTATCCCTTCCATAACTACAGACCTCAATCAGAACTaGACACAAAGGGAAATCTCT | + |
|
Preference number: 2 (lower is better) Translates to: EIRFMQMSVVLPIPSITTDLNQN*TQREIS Trigger: AGAGATTTCCCTTTGTGTGCAGTTCTGATTGAGGTC...TGTAGTTATGGAAGGGATAGGTAAAACTACTGACATTTGCATGAACCTAATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCATTGAGTATCTTGATCTTGTGAAGATTATATGCCCCAGTAGAGGGGAATGCTATCAAATCTTTCTTTaGAACAATGCCATCTTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: IIEYLDLVKIICPSRGECYQIFL*NNAIFH Trigger: GTGGAAGATGGCATTGTTGCAAAGAAAGATTTGATA...GCATTCCCCTCTACTGGGGCATATAATCTTCACAAGATCAAGATACTCAATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAATTAGGTTCATGCAAATGTCAGTAGTTTTACCTATCCCTTCCATAACTACAGAATCCCTGGGCTTCTaGTCATTGTTGGATATAATA | + |
|
Preference number: 2 (lower is better) Translates to: EIRFMQMSVVLPIPSITTESLGF*SLLDII Trigger: TATTATATCCAACAATGATCAGAAGCCCAGGGATTC...TGTAGTTATGGAAGGGATAGGTAAAACTACTGACATTTGCATGAACCTAATTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCTCAATCAGAACTGCACACAAAGGGAAATCTCTGAAAGAAATTAGGTTCATGTATCAAATCTTTCTTTaGAACAATGCCATCTTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: TSIRTAHKGKSLKEIRFMYQIFL*NNAIFH Trigger: GTGGAAGATGGCATTGTTGCAAAGAAAGATTTGATA...CATGAACCTAATTTCTTTCAGAGATTTCCCTTTGTGTGCAGTTCTGATTGAGGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | CAACAATGCCATCTTCCACGAATTTTCAATGAGTCAAATGTGGATGTTAATAGAGGAACAAATGGGATATaGAACCCTATAGGAAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: QQCHLPRIFNESNVDVNRGTNGI*NPIGRT Trigger: TGTTCTTCCTATAGGGTTGCATATCCCATTTGTTCC...TCTATTAACATCCACATTTGACTCATTGAAAATTCGTGGAAGATGGCATTGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAATTAGGTTCATGCAAATGTCAGTAGTTTTACCTATCCCTTCCATAACTACAGGAACAAATGGGATATaGAACCCTATAGGAAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: EIRFMQMSVVLPIPSITTGTNGI*NPIGRT Trigger: TGTTCTTCCTATAGGGTTGCATATCCCATTTGTTCC...TGTAGTTATGGAAGGGATAGGTAAAACTACTGACATTTGCATGAACCTAATTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAATTAGGTTCATGCAAATGTCAGTAGTTTTACCTATCCCTTCCATAACTACAGAGTGCAAGATTTTATaGACACTGTACGGAAGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: EIRFMQMSVVLPIPSITTECKIL*TLYGSS Trigger: TGAACTTCCGTACAGTGTCCATAAAATCTTGCACTC...TGTAGTTATGGAAGGGATAGGTAAAACTACTGACATTTGCATGAACCTAATTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGCAACAATGCCATCTTCCACGAATTTTCAATGAGTCAAATGTGGATGTTAATGAGTGCAAGATTTTATaGACACTGTACGGAAGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: LQQCHLPRIFNESNVDVNECKIL*TLYGSS Trigger: TGAACTTCCGTACAGTGTCCATAAAATCTTGCACTC...ATTAACATCCACATTTGACTCATTGAAAATTCGTGGAAGATGGCATTGTTGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR TCA 90 bp | GATATGATACTTCCTTTTATCACTAGAGCAACCAGTGAGAGTGATTCTAAAACTACAAAGGGAAATCTCTaGAAGAAATTAGGTTCATGC | + |
|
Preference number: 2 (lower is better) Translates to: DMILPFITRATSESDSKTTKGNL*KKLGSC Trigger: GCATGAACCTAATTTCTTTCAGAGATTTCCCTTTGT...AGTTTTAGAATCACTCTCACTGGTTGCTCTAGTGATAAAAGGAAGTATCATATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGATACTTCCTTTTATCACTAGAGCAACCAGTGAGAGTGATTCTAAAACTAGAACAAAGGGAAATCTCTaGAAGAAATTAGGTTCATGC | + |
|
Preference number: 2 (lower is better) Translates to: MILPFITRATSESDSKTRTKGNL*KKLGSC Trigger: GCATGAACCTAATTTCTTTCAGAGATTTCCCTTTGT...TCTAGTTTTAGAATCACTCTCACTGGTTGCTCTAGTGATAAAAGGAAGTATCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCAACAATGCCATCTTCCACGAATTTTCAATGAGTCAAATGTGGATGTTAATAAAGGTGACACCTTTCTaGATACATTTGTTCTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: CNNAIFHEFSMSQMWMLIKVTPF*IHLFCS Trigger: AGAACAGAACAAATGTATTCAGAAAGGTGTCACCTT...TATTAACATCCACATTTGACTCATTGAAAATTCGTGGAAGATGGCATTGTTGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCAACAATGCCATCTTCCACGAATTTTCAATGAGTCAAATGTGGATGTTAATACTTTCTTTGCAACAATaGCATCTTCCACGAATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: CNNAIFHEFSMSQMWMLILSLQQ*HLPRIF Trigger: GAAAATTCGTGGAAGATGGCATTGTTGCAAAGAAAG...TATTAACATCCACATTTGACTCATTGAAAATTCGTGGAAGATGGCATTGTTGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAATTAGGTTCATGCAAATGTCAGTAGTTTTACCTATCCCTTCCATAACTACACTTTCTTTGCAACAATaGCATCTTCCACGAATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: EIRFMQMSVVLPIPSITTLSLQQ*HLPRIF Trigger: GAAAATTCGTGGAAGATGGCATTGTTGCAAAGAAAG...TGTAGTTATGGAAGGGATAGGTAAAACTACTGACATTTGCATGAACCTAATTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGCAACAATGCCATCTTCCACGAATTTTCAATGAGTCAAATGTGGATGTTAACAGATGACTTTGTTTaGAAGGCCAATGAAGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LCNNAIFHEFSMSQMWMLTDDFV*KANEEK Trigger: TTTTTCTTCATTGGCCTTCCAAACAAAGTCATCTGT...TAACATCCACATTTGACTCATTGAAAATTCGTGGAAGATGGCATTGTTGCAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCCCCTCCTGGTTTGCCCCACTGACTCTTCCTCATCTAACAACTCCTCTGCCACCTGGGACTGTGACTTaGAAAGCTAGAACCACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SPSWFAPLTLPHLTTPLPPGTVT*KARTTV Trigger: CACTGTGGTTCTAGCTTTCAAAGTCACAGTCCCAGG...TGGCAGAGGAGTTGTTAGATGAGGAAGAGTCAGTGGGGCAAACCAGGAGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR GCA 72 bp | TCTGCCATCTCCAAGATGATATCCCTACATCCCCAATaGCCAGCACTTCCCAATCCCTGGGGACTTAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SAISKMISLHPQ*PALPNPWGLKS Trigger: AGACTTAAGTCCCCAGGGATTGGGAAGTGCTGGGCATTGGGGATGTAGGGATATCATCTTGGAGATGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR TCA 72 bp | CTTCCTCATCTAACAACTCCTCTGCCATCTCCAAGATaGTATCCCTACATCCCCAATGCCCAGCACTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LPHLTTPLPSPR*YPYIPNAQHFP Trigger: TGGGAAGTGCTGGGCATTGGGGATGTAGGGATATCATCTTGGAGATGGCAGAGGAGTTGTTAGATGAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR GCA 72 bp | ATTCTTGGCCAAGAAAGCCAAAGTGAAGCTTCCCAGTaGCAGGCAGGCCAAGTATCCAAGGACACAGTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ILGQESQSEASQ*QAGQVSKDTVE Trigger: TTCTACTGTGTCCTTGGATACTTGGCCTGCCTGGCACTGGGAAGCTTCACTTTGGCTTTCTTGGCCAAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR CCA 72 bp | GTGTGTCTCCCACTGATGCTAGACCAGGCAGTCTTATaGTGCATATTTGTTGGGGGCTTCACATCAGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: VCLPLMLDQAVL*CIFVGGFTSAC Trigger: ACAAGCTGATGTGAAGCCCCCAACAAATATGCACCATAAGACTGCCTGGTCTAGCATCAGTGGGAGACACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR TCA 72 bp | GGCCAAGTATCCAAGGACACAGTAGAATGCAGTAACTaGGCCCTTGTTGCACACAATGATGATGTGGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: GQVSKDTVECSN*ALVAHNDDVAM Trigger: CATGGCCACATCATCATTGTGTGCAACAAGGGCTCAGTTACTGCATTCTACTGTGTCCTTGGATACTTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR CCA 72 bp | TTGTTGGGGGCTTCACATCAGCTTGTGTATGATCTCTaGTTAGAGGCTCAGTGTCTGAGAGATCTTGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LLGASHQLVYDL*LEAQCLRDLAC Trigger: ACAAGCAAGATCTCTCAGACACTGAGCCTCTAACCAGAGATCATACACAAGCTGATGTGAAGCCCCCAACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR TCA 72 bp | TGCATATTTGTTGGGGGCTTCACATCAGCTTGTGTATaGTCTCTGGTTAGAGGCTCAGTGTCTGAGAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: CIFVGGFTSACV*SLVRGSVSERS Trigger: AGATCTCTCAGACACTGAGCCTCTAACCAGAGATCATACACAAGCTGATGTGAAGCCCCCAACAAATATGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR TCA 72 bp | TGGGATACTCCACCATCATTGAGTATCTTGATCTTGTaGAGATTATATGCCCCAGTAGAGGGGAATGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: WDTPPSLSILIL*RLYAPVEGNAR Trigger: CCTGGCATTCCCCTCTACTGGGGCATATAATCTTCACAAGATCAAGATACTCAATGATGGTGGAGTATCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR CAA 90 bp | CACAGAGCCTCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAACAAATGGGATACCTTATCAACGTTTTTaGGAAGTTACCAGAGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: HRASNEGARESTQGTNGIPYQRF*EVTRGQ Trigger: TTGCCCTCTGGTAACTTCCAAAAAACGTTGATAAGG...TATCCCATTTGTTCCTTGGGTACTTTCTCTAGCTCCTTCATTGGAGGCTCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAACCACAGTGACTGTTTTGGCCAGAACTGTGGAAACAGCCACAGTGAATACAAAGACACAGATGACTTaGTTTGGAAGGCCAATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RTTVTVLARTVETATVNTKTQMT*FGRPMK Trigger: CTTCATTGGCCTTCCAAACAAAGTCATCTGTGTCTT...TGTATTCACTGTGGCTGTTTCCACAGTTCTGGCCAAAACAGTCACTGTGGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCTTGGGTACAAAAATACATCCAAGCATCCCTGCACTGGATGCCAAGATAGAAGACTGCTAGCCAGATaGCACACAGAACACATTGGA | + |
|
Preference number: 3 (lower is better) Translates to: NLGYKNTSKHPCTGCQDRRLLAR*HTEHIG Trigger: TCCAATGTGTTCTGTGTGCAATCTGGCTAGCAGTCT...TCTATCTTGGCATCCAGTGCAGGGATGCTTGGATGTATTTTTGTACCCAAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR TCA 72 bp | AAGCATCTGCCTCTCATTCTGTTTTCCAGAATTTTCTaGGTCCAGGACCTCAATCAGAACTGCACACAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KHLPLILFSRIF*VQDLNQNCTQR Trigger: CCTTTGTGTGCAGTTCTGATTGAGGTCCTGGACTCAGAAAATTCTGGAAAACAGAATGAGAGGCAGATGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAACAACAATATGAACCATCCAGTTCCCACAGAGCTCATGTGTTTAGCTGCCCTTATCAACGTTTTTaGGAAGTTACCAGAGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: EEQQYEPSSSHRAHVFSCPYQRF*EVTRGQ Trigger: TTGCCCTCTGGTAACTTCCAAAAAACGTTGATAAGG...GCAGCTAAACACATGAGCTCTGTGGGAACTGGATGGTTCATATTGTTGTTCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCTAGAGAAAGTACCCAAGGAACAAATGGGATATGCAACCCTATAGGAAGACCTTATCAACGTTTTTaGGAAGTTACCAGAGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GARESTQGTNGICNPIGRPYQRF*EVTRGQ Trigger: TTGCCCTCTGGTAACTTCCAAAAAACGTTGATAAGG...TCTTCCTATAGGGTTGCATATCCCATTTGTTCCTTGGGTACTTTCTCTAGCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCCAGGACCTCAATCAGAACTGCACACAAAGGGAAATCTCTGAAAGAAATTAAGACACAGATGACTTaGTTTGGAAGGCCAATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ESRTSIRTAHKGKSLKEIKTQMT*FGRPMK Trigger: CTTCATTGGCCTTCCAAACAAAGTCATCTGTGTCTT...AATTTCTTTCAGAGATTTCCCTTTGTGTGCAGTTCTGATTGAGGTCCTGGACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCTCAATCAGAACTGCACACAAAGGGAAATCTCTGAAAGAAATTAGGTTCATGAGACTGCTAGCCAGATaGCACACAGAACACATTGGA | + |
|
Preference number: 3 (lower is better) Translates to: TSIRTAHKGKSLKEIRFMRLLAR*HTEHIG Trigger: TCCAATGTGTTCTGTGTGCAATCTGGCTAGCAGTCT...CATGAACCTAATTTCTTTCAGAGATTTCCCTTTGTGTGCAGTTCTGATTGAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGTACCCAAGGAACAAATGGGATATGCAACCCTATAGGAAGAACAACAATAGCAGTAACTGAGCCCTaGTTGCACACAATGATGATG | + |
|
Preference number: 3 (lower is better) Translates to: ESTQGTNGICNPIGRTTIAVTEP*LHTMMM Trigger: CATCATCATTGTGTGCAACAAGGGCTCAGTTACTGC...TATTGTTGTTCTTCCTATAGGGTTGCATATCCCATTTGTTCCTTGGGTACTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR-3UTR CAA 90 bp | CAACAATGCCATCTTCCACGAATTTTCAATGAGTCAAATGTGGATGTTAATAGACCTGGGACTGTGACTTaGAAAGCTAGAACCACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QQCHLPRIFNESNVDVNRPGTVT*KARTTV Trigger: CACTGTGGTTCTAGCTTTCAAAGTCACAGTCCCAGG...TCTATTAACATCCACATTTGACTCATTGAAAATTCGTGGAAGATGGCATTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGATACTTCCTTTTATCACTAGAGCAACCAGTGAGAGTGATTCTAAAACTAGATTATTAGAAAGGGGTTaGTGGAGTGTGTGGGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: MILPFITRATSESDSKTRLLERG*WSVWGE Trigger: CTCACCCCACACACTCCACAAACCCCTTTCTAATAA...TCTAGTTTTAGAATCACTCTCACTGGTTGCTCTAGTGATAAAAGGAAGTATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000142934.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCAACAATGCCATCTTCCACGAATTTTCAATGAGTCAAATGTGGATGTTAATACCTTATCAACGTTTTTaGGAAGTTACCAGAGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: CNNAIFHEFSMSQMWMLIPYQRF*EVTRGQ Trigger: TTGCCCTCTGGTAACTTCCAAAAAACGTTGATAAGG...TATTAACATCCACATTTGACTCATTGAAAATTCGTGGAAGATGGCATTGTTGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| 3UTR TCA 72 bp | ATCTTAATCCCAAGGTGTTGTGAGAGATTCGCAAAGTaGACAATGTCATATTCATCCTGCATTATTACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ILIPRCCERFAK*TMSYSSCIITL Trigger: AAGAGTAATAATGCAGGATGAATATGACATTGTTCACTTTGCGAATCTCTCACAACACCTTGGGATTAAGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233668.2 |
||
| 3UTR CAA 72 bp | GAGGCTCAGTGTCTGAGAGATCTTGCTTGTCCAGGTTaGTTGAGAATGCTGGTCACCCTCCTCCTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EAQCLRDLACPG*LRMLVTLLLSF Trigger: GAAGCTGAGGAGGAGGGTGACCAGCATTCTCAACAAACCTGGACAAGCAAGATCTCTCAGACACTGAGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| CDS-3UTR CCA 90 bp | CAGCACTTCCCAATCCCTGGGGACTTAAGTCTCTCTGGGGTTAGGTGTGTCTCCGGAGGGCATGGGCTATaGCATGCACAGCATTATATA | + |
|
Preference number: 4 (lower is better) Translates to: QHFPIPGDLSLSGVRCVSGGHGL*HAQHYI Trigger: TATATAATGCTGTGCATGCCATAGCCCATGCCCTCC...GGAGACACACCTAACCCCAGAGAGACTTAAGTCCCCAGGGATTGGGAAGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 |
||
| 3UTR CAA 72 bp | GCTCAGTGTCTGAGAGATCTTGCTTGTCCAGGTTTGTaGAGAATGCTGGTCACCCTCCTCCTCAGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AQCLRDLACPGL*RMLVTLLLSFF Trigger: GAAGAAGCTGAGGAGGAGGGTGACCAGCATTCTCAACAAACCTGGACAAGCAAGATCTCTCAGACACTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| CDS-3UTR CCA 90 bp | ATTATATGCCCCAGTAGAGGGGAATGCCAGGGTCTGGAAGCAGGAGTGGGTTGGTCTCAATCTTCTTCCTaGGACTGTGACTTTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IICPSRGECQGLEAGVGWSQSSS*DCDFES Trigger: GCTTTCAAAGTCACAGTCCCAGGAAGAAGATTGAGA...CCAACCCACTCCTGCTTCCAGACCCTGGCATTCCCCTCTACTGGGGCATATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086282.13 ENSMUST00000146278.9 |
||
| 3UTR CAA 72 bp | TCTCTGGTTAGAGGCTCAGTGTCTGAGAGATCTTGCTaGTCCAGGTTTGTTGAGAATGCTGGTCACCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLVRGSVSERSC*SRFVENAGHPP Trigger: AGGAGGGTGACCAGCATTCTCAACAAACCTGGACAAGCAAGATCTCTCAGACACTGAGCCTCTAACCAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
||
| CDS-3UTR GCA 90 bp | CTAGTAGTTATCCCCCTCCTGGTTTGCCCCACTGACTCTTCCTCATCTAACAACGCATGGGCTATGGCATaGACAGCATTATATATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LVVIPLLVCPTDSSSSNNAWAMA*TALYML Trigger: TAACATATATAATGCTGTGCATGCCATAGCCCATGC...GTTGTTAGATGAGGAAGAGTCAGTGGGGCAAACCAGGAGGGGGATAACTACTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 |
||
| CDS-3UTR CCA 90 bp | CTAGTAGTTATCCCCCTCCTGGTTTGCCCCACTGACTCTTCCTCATCTAACAACAGGAGTTTACCATGGTaGGGTAGAAAAGTAAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LVVIPLLVCPTDSSSSNNRSLPW*GRKVSD Trigger: ATCACTTACTTTTCTACCCCACCATGGTAAACTCCT...GTTGTTAGATGAGGAAGAGTCAGTGGGGCAAACCAGGAGGGGGATAACTACTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233668.2 |
||
| CDS-3UTR CCA 90 bp | AATCTTGGGTACAAAAATACATCCAAGCATCCCTGCACTGGATGCCAAGATAGAGGAGGGCATGGGCTATaGCATGCACAGCATTATATA | + |
|
Preference number: 4 (lower is better) Translates to: NLGYKNTSKHPCTGCQDRGGHGL*HAQHYI Trigger: TATATAATGCTGTGCATGCCATAGCCCATGCCCTCC...TCTATCTTGGCATCCAGTGCAGGGATGCTTGGATGTATTTTTGTACCCAAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142934.3 |
||
| 3UTR CAA 72 bp | ACTGTGACTTTGAAAGCTAGAACCACAGTGACTGTTTaGGCCAGAACTGTGGAAACAGCCACAGTGAATACA | + |
|
Preference number: 4 (lower is better) Translates to: TVTLKARTTVTV*ARTVETATVNT Trigger: TGTATTCACTGTGGCTGTTTCCACAGTTCTGGCCAAAACAGTCACTGTGGTTCTAGCTTTCAAAGTCACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142934.3 ENSMUST00000233668.2 |
||
| CDS-3UTR TCA 90 bp | ATCATTGAGTATCTTGATCTTGTGAAGATTATATGCCCCAGTAGAGGGGAATGCGTCTTTATGCAAGGATaGAATGGAGAGGAGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IIEYLDLVKIICPSRGECVFMQG*NGEELV Trigger: GACAAGCTCCTCTCCATTTCATCCTTGCATAAAGAC...GCATTCCCCTCTACTGGGGCATATAATCTTCACAAGATCAAGATACTCAATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142934.3 |
||
| CDS-3UTR GCA 90 bp | GGAGCTAGAGAAAGTACCCAAGGAACAAATGGGATATGCAACCCTATAGGAAGAGCATGGGCTATGGCATaGACAGCATTATATATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GARESTQGTNGICNPIGRAWAMA*TALYML Trigger: TAACATATATAATGCTGTGCATGCCATAGCCCATGC...TCTTCCTATAGGGTTGCATATCCCATTTGTTCCTTGGGTACTTTCTCTAGCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 |
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| CDS-3UTR GCA 90 bp | GGAGCTAGAGAAAGTACCCAAGGAACAAATGGGATATGCAACCCTATAGGAAGAATGTTCCTGTCTTTATaGAAGGATGAAATGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GARESTQGTNGICNPIGRMFLSL*KDEMER Trigger: CCTCTCCATTTCATCCTTGCATAAAGACAGGAACAT...TCTTCCTATAGGGTTGCATATCCCATTTGTTCCTTGGGTACTTTCTCTAGCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142934.3 |
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| CDS-3UTR CCA 90 bp | TTGCAACAATGCCATCTTCCACGAATTTTCAATGAGTCAAATGTGGATGTTAATTCTCAATCTTCTTCCTaGGACTGTGACTTTGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LQQCHLPRIFNESNVDVNSQSSS*DCDFES Trigger: GCTTTCAAAGTCACAGTCCCAGGAAGAAGATTGAGA...ATTAACATCCACATTTGACTCATTGAAAATTCGTGGAAGATGGCATTGTTGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086282.13 ENSMUST00000146278.9 |
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| CDS-3UTR GCA 90 bp | TTGCAACAATGCCATCTTCCACGAATTTTCAATGAGTCAAATGTGGATGTTAATGCATGGGCTATGGCATaGACAGCATTATATATGTTA | + |
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Preference number: 4 (lower is better) Translates to: LQQCHLPRIFNESNVDVNAWAMA*TALYML Trigger: TAACATATATAATGCTGTGCATGCCATAGCCCATGC...ATTAACATCCACATTTGACTCATTGAAAATTCGTGGAAGATGGCATTGTTGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 |
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| CDS-3UTR CCA 90 bp | TTGCAACAATGCCATCTTCCACGAATTTTCAATGAGTCAAATGTGGATGTTAATTATGCAAGGATGAAATaGAGAGGAGCTTGTCTCATT | + |
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Preference number: 4 (lower is better) Translates to: LQQCHLPRIFNESNVDVNYARMK*RGACLI Trigger: AATGAGACAAGCTCCTCTCCATTTCATCCTTGCATA...ATTAACATCCACATTTGACTCATTGAAAATTCGTGGAAGATGGCATTGTTGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142934.3 |
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| 3UTR CAA 72 bp | TTTCTGAATACATTTGTTCTGTTCTGTGTTGGCATATaGGTATTCTGGACAATTCACGCATTGATCCATATC | + |
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Preference number: 4 (lower is better) Translates to: FLNTFVLFCVGI*VFWTIHALIHI Trigger: GATATGGATCAATGCGTGAATTGTCCAGAATACCAATATGCCAACACAGAACAGAACAAATGTATTCAGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142934.3 |
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| 3UTR CAA 72 bp | TTTCTGAATACATTTGTTCTGTTCTGTGTTGGCATATaGGTATTCTGGACAATTCACGCATTGATCCATATT | + |
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Preference number: 4 (lower is better) Translates to: FLNTFVLFCVGI*VFWTIHALIHI Trigger: AATATGGATCAATGCGTGAATTGTCCAGAATACCAATATGCCAACACAGAACAGAACAAATGTATTCAGAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233668.2 |
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| CDS-3UTR CCA 90 bp | ATGATACTTCCTTTTATCACTAGAGCAACCAGTGAGAGTGATTCTAAAACTAGATTTTCTCTGATCTTTTaGGTAGAATTTCTCTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: MILPFITRATSESDSKTRFSLIF*VEFLSG Trigger: ACCAGAGAGAAATTCTACCCAAAAGATCAGAGAAAA...TCTAGTTTTAGAATCACTCTCACTGGTTGCTCTAGTGATAAAAGGAAGTATCAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000086282.13 ENSMUST00000146278.9 |
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| CDS-3UTR CAA 90 bp | CAGCACTTCCCAATCCCTGGGGACTTAAGTCTCTCTGGGGTTAGGTGTGTCTCCCCTGGGACTGTGACTTaGAAAGCTAGAACCACAGTG | + |
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Preference number: 5 (lower is better) Translates to: QHFPIPGDLSLSGVRCVSPGTVT*KARTTV Trigger: CACTGTGGTTCTAGCTTTCAAAGTCACAGTCCCAGG...GGAGACACACCTAACCCCAGAGAGACTTAAGTCCCCAGGGATTGGGAAGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086282.13 ENSMUST00000146278.9 |
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| CDS-3UTR CAA 90 bp | TCCCCCTCCTGGTTTGCCCCACTGACTCTTCCTCATCTAACAACTCCTCTGCCAAGACTGCTAGCCAGATaGCACACAGAACACATTGGA | + |
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Preference number: 5 (lower is better) Translates to: SPSWFAPLTLPHLTTPLPRLLAR*HTEHIG Trigger: TCCAATGTGTTCTGTGTGCAATCTGGCTAGCAGTCT...TGGCAGAGGAGTTGTTAGATGAGGAAGAGTCAGTGGGGCAAACCAGGAGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086282.13 ENSMUST00000146278.9 |
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| CDS-3UTR CAA 90 bp | CTAGTAGTTATCCCCCTCCTGGTTTGCCCCACTGACTCTTCCTCATCTAACAACAGACTGCTAGCCAGATaGCACACAGAACACATTGGA | + |
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Preference number: 5 (lower is better) Translates to: LVVIPLLVCPTDSSSSNNRLLAR*HTEHIG Trigger: TCCAATGTGTTCTGTGTGCAATCTGGCTAGCAGTCT...GTTGTTAGATGAGGAAGAGTCAGTGGGGCAAACCAGGAGGGGGATAACTACTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086282.13 ENSMUST00000146278.9 |
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| CDS-3UTR CAA 90 bp | TCCCCCTCCTGGTTTGCCCCACTGACTCTTCCTCATCTAACAACTCCTCTGCCATTTTTCTCTGATCTTTaGGGTAGAATTTCTCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: SPSWFAPLTLPHLTTPLPFFSDL*GRISLW Trigger: CCAGAGAGAAATTCTACCCAAAAGATCAGAGAAAAA...TGGCAGAGGAGTTGTTAGATGAGGAAGAGTCAGTGGGGCAAACCAGGAGGGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000086282.13 ENSMUST00000146278.9 |
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| CDS-3UTR CAA 90 bp | ATCATTGAGTATCTTGATCTTGTGAAGATTATATGCCCCAGTAGAGGGGAATGCCCTGGGACTGTGACTTaGAAAGCTAGAACCACAGTG | + |
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Preference number: 5 (lower is better) Translates to: IIEYLDLVKIICPSRGECPGTVT*KARTTV Trigger: CACTGTGGTTCTAGCTTTCAAAGTCACAGTCCCAGG...GCATTCCCCTCTACTGGGGCATATAATCTTCACAAGATCAAGATACTCAATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086282.13 ENSMUST00000146278.9 |
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| CDS TCA 90 bp | TCATGGAGGGCATGGGCTATGGCATGCACAGCATTATATATGTTATaGCTATTCTCACTAAAGGCCATGTCAAGCTTCTCTTCCATTAGC | + |
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Preference number: 5 (lower is better) Translates to: SWRAWAMACTALYML*LFSLKAMSSFSSIS Trigger: GCTAATGGAAGAGAAGCTTGACATGGCCTTTAGTGAGAATAGTCATAACATATATAATGCTGTGCATGCCATAGCCCATGCCCTCCATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 |
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| CDS GCA 72 bp | CTTCTGTTATTGGCCTTCACAATAGGAGTGTCATGGTaGTTCACAAAGACACAAAGTACCACAGTTGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: LLLLAFTIGVSW*FTKTQSTTVVS Trigger: TGAGACAACTGTGGTACTTTGTGTCTTTGTGAAGCACCATGACACTCCTATTGTGAAGGCCAATAACAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146278.9 |
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| CDS CCA 72 bp | CCTGTTGCAGATTCATCTCATGGAGGGCATGGGCTATaGCATGCACAGCATTATATATGTTATGACTATTCT | + |
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Preference number: 6 (lower is better) Translates to: PVADSSHGGHGL*HAQHYICYDYS Trigger: AGAATAGTCATAACATATATAATGCTGTGCATGCCATAGCCCATGCCCTCCATGAGATGAATCTGCAACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 |
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| CDS TCA 72 bp | GCATGGGCTATGGCATGCACAGCATTATATATGTTATaGCTATTCTCACTAAAGGCCATGTCAAGCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: AWAMACTALYML*LFSLKAMSSFS Trigger: AGAGAAGCTTGACATGGCCTTTAGTGAGAATAGTCATAACATATATAATGCTGTGCATGCCATAGCCCATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 |
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| CDS CCA 72 bp | CCAGGTACTTCCAGAAACTTAAAGATTCATCCCAATTaGGTCCTGAAAGCAGAAATGAACACATACTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: PGTSRNLKIHPN*VLKAEMNTYSL Trigger: AAGAGAGTATGTGTTCATTTCTGCTTTCAGGACCCAATTGGGATGAATCTTTAAGTTTCTGGAAGTACCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| CDS TCA 72 bp | AATCTTTTTCAATGGGTGTCTGAACAGCTGCCAGGATaGAAGCACAAGATAATCCCAAATATTCATCCGTTA | + |
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Preference number: 6 (lower is better) Translates to: NLFQWVSEQLPG*KHKIIPNIHPL Trigger: TAACGGATGAATATTTGGGATTATCTTGTGCTTTCATCCTGGCAGCTGTTCAGACACCCATTGAAAAAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| CDS TCA 72 bp | CTCTGTTTCTTCAACTCTAAAAGAAATTGGTTTCCTTaGTCATCATCTGGGATGACAAGGCCAATCCAATTC | + |
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Preference number: 6 (lower is better) Translates to: LCFFNSKRNWFP*SSSGMTRPIQF Trigger: GAATTGGATTGGCCTTGTCATCCCAGATGATGATCAAGGAAACCAATTTCTTTTAGAGTTGAAGAAACAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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| CDS CCA 72 bp | TTCTTAGAAAGGAGTTTACCTTCAAGCAGTGAGAACTaGCTCCTTTTCCATTATCTATTGCCTGATTATCAG | + |
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Preference number: 6 (lower is better) Translates to: FLERSLPSSSEN*LLFHYLLPDYQ Trigger: CTGATAATCAGGCAATAGATAATGGAAAAGGAGCCAGTTCTCACTGCTTGAAGGTAAACTCCTTTCTAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 |
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| CDS CCA 72 bp | TCTGGCATTACTAGACATAAATCTGTGTTTCTGAGATaGAACCATGTCTGTACAAAATTTTTAAAGCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SGITRHKSVFLR*NHVCTKFLKPE Trigger: TTCTGGCTTTAAAAATTTTGTACAGACATGGTTCCATCTCAGAAACACAGATTTATGTCTAGTAATGCCAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 |
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| CDS CAA 72 bp | AAATTTATTCTCCAAAAGCACCTGGGATCAATGAAATaGGCCATGAGAAGTGTAATATTAAGTAGGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: KFILQKHLGSMK*AMRSVILSRKK Trigger: CTTCTTCCTACTTAATATTACACTTCTCATGGCCAATTTCATTGATCCCAGGTGCTTTTGGAGAATAAATTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086282.13 ENSMUST00000142934.3 ENSMUST00000146278.9 ENSMUST00000233668.2 |
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