Pregenerated sensors for VMN2R4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000092049Ensembl transcript IDs: ENSMUST00000170280.3, ENSMUST00000175724.9, ENSMUST00000233824.2
Found 237 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACAGTGGACACCGTGGTGCTGTTAAGCTCACTGCTCACAGAAGCTaGGGTCAGCTGGATGCTCCTGTCAACAGTGGGGACTCTTCCACC | + |
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Preference number: 1 (lower is better) Translates to: DSGHRGAVKLTAHRS*GQLDAPVNSGDSST Trigger: GGTGGAAGAGTCCCCACTGTTGACAGGAGCATCCAGCTGACCTCAGCTTCTGTGAGCAGTGAGCTTAACAGCACCACGGTGTCCACTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
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| 3UTR TCA 90 bp | AGAATGGAAGACAAACAAAGGCAAAAGCCCAGTGCCAGAGTGACCTaGCGGGTCTTGCAGGACCAGTTGCATGGCTTGCCTATGAACAAC | + |
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Preference number: 1 (lower is better) Translates to: RMEDKQRQKPSARVT*RVLQDQLHGLPMNN Trigger: GTTGTTCATAGGCAAGCCATGCAACTGGTCCTGCAAGACCCGTCAGGTCACTCTGGCACTGGGCTTTTGCCTTTGTTTGTCTTCCATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
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| 3UTR CCA 90 bp | AAGCTCAGCTCCCGGTCATTGGCTTTCACCAATGGAGTGTGCCTGTaGATCACATACACAACAGTAACTGCCAAGACCACAAGAGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: KLSSRSLAFTNGVCL*ITYTTVTAKTTRAP Trigger: TGGAGCTCTTGTGGTCTTGGCAGTTACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
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| 3UTR GCA 90 bp | ATGAGGAAGCTCAGCTCCCGGTCATTGGCTTTCACCAATGGAGTGTaGCTGTGGATCACATACACAACAGTAACTGCCAAGACCACAAGA | + |
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Preference number: 1 (lower is better) Translates to: MRKLSSRSLAFTNGV*LWITYTTVTAKTTR Trigger: TCTTGTGGTCTTGGCAGTTACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTTCCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
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| 3UTR CCA 90 bp | CATCTGAATGAGGAAGCTCAGCTCCCGGTCATTGGCTTTCACCAATaGAGTGTGCCTGTGGATCACATACACAACAGTAACTGCCAAGAC | + |
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Preference number: 1 (lower is better) Translates to: HLNEEAQLPVIGFHQ*SVPVDHIHNSNCQD Trigger: GTCTTGGCAGTTACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTTCCTCATTCAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
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| 3UTR TCA 90 bp | CCTATGAACAACATGGATGATAGCACTGTGATTCCCAGAGACATCTaGATGAGGAAGCTCAGCTCCCGGTCATTGGCTTTCACCAATGGA | + |
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Preference number: 1 (lower is better) Translates to: PMNNMDDSTVIPRDI*MRKLSSRSLAFTNG Trigger: TCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTTCCTCATTCAGATGTCTCTGGGAATCACAGTGCTATCATCCATGTTGTTCATAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
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| 3UTR CCA 90 bp | GACCAGCATCCCAAAAGTGATACATTTCCCTTCATAATAGTTATCTaGCAGCTGGCGAGCCACAAAGGTGGTAGCAAAACACAGCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: DQHPKSDTFPFIIVI*QLASHKGGSKTQQS Trigger: GCTCTGCTGTGTTTTGCTACCACCTTTGTGGCTCGCCAGCTGCCAGATAACTATTATGAAGGGAAATGTATCACTTTTGGGATGCTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
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| 3UTR TCA 90 bp | GGACCCCAGGCCTATAAGACCACCAACAGGGCAGCATATATCAACTaGTATGAAGTTCCCAACACATATACAGTAGGATTTCCAGGTCTG | + |
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Preference number: 1 (lower is better) Translates to: GPQAYKTTNRAAYIN*YEVPNTYTVGFPGL Trigger: CAGACCTGGAAATCCTACTGTATATGTGTTGGGAACTTCATATCAGTTGATATATGCTGCCCTGTTGGTGGTCTTATAGGCCTGGGGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR CCA 90 bp | TGGTGTCAGCATTTGGAGGCTGGTTATGGGATGGATCCCTGGGTATaGCAGTCTCTAGATAGTTCATCCTTTTGTTTCAGCTCCAAACTT | + |
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Preference number: 1 (lower is better) Translates to: WCQHLEAGYGMDPWV*QSLDSSSFCFSSKL Trigger: AAGTTTGGAGCTGAAACAAAAGGATGAACTATCTAGAGACTGCCATACCCAGGGATCCATCCCATAACCAGCCTCCAAATGCTGACACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR CCA 90 bp | TCTTCTGCTACATATGCAGCTAGAGACACGAGCTCCGGAAGGTACTaGTTAGTTCATATATTTGTTCCACCTATAGGGTTGAAGATCCCT | + |
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Preference number: 1 (lower is better) Translates to: SSATYAARDTSSGRY*LVHIFVPPIGLKIP Trigger: AGGGATCTTCAACCCTATAGGTGGAACAAATATATGAACTAACCAGTACCTTCCGGAGCTCGTGTCTCTAGCTGCATATGTAGCAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR CCA 90 bp | CAAGGAATTCTACATGCTTTGGCACACACTTGTTCTTCTCTGCATTaGACCAGTCATTTTCACCACATGGATCACATAGCCTTTGACCTC | + |
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Preference number: 1 (lower is better) Translates to: QGILHALAHTCSSLH*TSHFHHMDHIAFDL Trigger: GAGGTCAAAGGCTATGTGATCCATGTGGTGAAAATGACTGGTCCAATGCAGAGAAGAACAAGTGTGTGCCAAAGCATGTAGAATTCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
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| 3UTR TCA 90 bp | CATGAGCATCAGCAGCTGCTTGAAAAACAATGTTCAGAGGAAGATTaGGCTATGCCATTATCCAGCTTTGCATGTCACATGGATCTCACT | + |
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Preference number: 1 (lower is better) Translates to: HEHQQLLEKQCSEED*AMPLSSFACHMDLT Trigger: AGTGAGATCCATGTGACATGCAAAGCTGGATAATGGCATAGCTCAATCTTCCTCTGAACATTGTTTTTCAAGCAGCTGCTGATGCTCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR GCA 90 bp | ATCAGCAGCTGCTTGAAAAACAATGTTCAGAGGAAGATTGAGCTATaGCATTATCCAGCTTTGCATGTCACATGGATCTCACTGCTCTAC | + |
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Preference number: 1 (lower is better) Translates to: ISSCLKNNVQRKIEL*HYPALHVTWISLLY Trigger: GTAGAGCAGTGAGATCCATGTGACATGCAAAGCTGGATAATGGCATAGCTCAATCTTCCTCTGAACATTGTTTTTCAAGCAGCTGCTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
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| 3UTR TCA 90 bp | TATCCACTTATCAGTGAGTACATATCATGTGAGGTCTTTTGTGATTaGATTACCTCACTCAGGATGATGCCCTCCAGGTCCAAATCCATC | + |
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Preference number: 1 (lower is better) Translates to: YPLISEYISCEVFCD*ITSLRMMPSRSKSI Trigger: GATGGATTTGGACCTGGAGGGCATCATCCTGAGTGAGGTAATTCAATCACAAAAGACCTCACATGATATGTACTCACTGATAAGTGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR CCA 90 bp | AAGAAGCAAGGATGTGTGGAAAGAGAAACTCTAAGCAGTTGCTGGTaGGATGGTAAACTGGTACAATTACTCTGGAAATCAATCTGGAGT | + |
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Preference number: 1 (lower is better) Translates to: KKQGCVERETLSSCW*DGKLVQLLWKSIWS Trigger: ACTCCAGATTGATTTCCAGAGTAATTGTACCAGTTTACCATCCCACCAGCAACTGCTTAGAGTTTCTCTTTCCACACATCCTTGCTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR TCA 90 bp | GAAATGCAAATCAAAACAATCTTGAGACTCCCCCTTACACCAATCTaGACAACAAAGAAGCAAGGATGTGTGGAAAGAGAAACTCTAAGC | + |
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Preference number: 1 (lower is better) Translates to: EMQIKTILRLPLTPI*TTKKQGCVERETLS Trigger: GCTTAGAGTTTCTCTTTCCACACATCCTTGCTTCTTTGTTGTTCAGATTGGTGTAAGGGGGAGTCTCAAGATTGTTTTGATTTGCATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR CCA 90 bp | TACTCAGCTATTAAGAATGATGGCATCCTGAGTTTTGAAGGCAAATaGATGGAACTAGAAAATATCATCCTGAGTGAGGGTAACTCAGAC | + |
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Preference number: 1 (lower is better) Translates to: YSAIKNDGILSFEGK*MELENIILSEGNSD Trigger: GTCTGAGTTACCCTCACTCAGGATGATATTTTCTAGTTCCATCCATTTGCCTTCAAAACTCAGGATGCCATCATTCTTAATAGCTGAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR CCA 90 bp | ACTCTAAGCAGTTGCTGGTGGGATGGTAAACTGGTACAATTACTCTaGAAATCAATCTGGAGTTTGTTCAGAAAATTGGAAATAGAACTA | + |
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Preference number: 1 (lower is better) Translates to: TLSSCWWDGKLVQLL*KSIWSLFRKLEIEL Trigger: TAGTTCTATTTCCAATTTTCTGAACAAACTCCAGATTGATTTCCAGAGTAATTGTACCAGTTTACCATCCCACCAGCAACTGCTTAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR CCA 90 bp | ACTTCTAGAGATTTACAATTAATCATACAGCCTTCTCAGATGATTTaGCAAGCTCCTAATGACATGTGGCTCTCAGAGTCAATAGTCTTT | + |
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Preference number: 1 (lower is better) Translates to: TSRDLQLIIQPSQMI*QAPNDMWLSESIVF Trigger: AAAGACTATTGACTCTGAGAGCCACATGTCATTAGGAGCTTGCCAAATCATCTGAGAAGGCTGTATGATTAATTGTAAATCTCTAGAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR GCA 90 bp | AATATCTTCCCGGGGTCCCATTTATCAATTCTTGATCTTAGAGTATaGACCATTGGCTTCTTTAAGGAAAAAGACATAGTAAATAAGACA | + |
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Preference number: 1 (lower is better) Translates to: NIFPGSHLSILDLRV*TIGFFKEKDIVNKT Trigger: TGTCTTATTTACTATGTCTTTTTCCTTAAAGAAGCCAATGGTGCATACTCTAAGATCAAGAATTGATAAATGGGACCCCGGGAAGATATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR CCA 90 bp | TCACAGAAGCTGAGGTCAGCTGGATGCTCCTGTCAACAGTGGGGACTCTTCCACTGGTGGGGTAGGGGATaGAAGGCCGTGACACCCTCG | + |
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Preference number: 2 (lower is better) Translates to: SQKLRSAGCSCQQWGLFHWWGRG*KAVTPS Trigger: CGAGGGTGTCACGGCCTTCCATCCCCTACCCCACCA...GTGGAAGAGTCCCCACTGTTGACAGGAGCATCCAGCTGACCTCAGCTTCTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
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| 3UTR-3UTR TCA 90 bp | AACACCTCAGTTCCACTTGGGAGGGAGAAGAAATCAACCAAGAGGGAGAGTGAGGGGGATGGAAGGCCGTaGCACCCTCGTGGAGATAGT | + |
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Preference number: 2 (lower is better) Translates to: NTSVPLGREKKSTKRESEGDGRP*HPRGDS Trigger: ACTATCTCCACGAGGGTGTCACGGCCTTCCATCCCC...CTCACTCTCCCTCTTGGTTGATTTCTTCTCCCTCCCAAGTGGAACTGAGGTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGTGAGAACACCTCAGTTCCACTTGGGAGGGAGAAGAAATCAACCAAGAGGGGGGGATGGAAGGCCGTaGCACCCTCGTGGAGATAGT | + |
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Preference number: 2 (lower is better) Translates to: QVRTPQFHLGGRRNQPRGGDGRP*HPRGDS Trigger: ACTATCTCCACGAGGGTGTCACGGCCTTCCATCCCC...CCCTCTTGGTTGATTTCTTCTCCCTCCCAAGTGGAACTGAGGTGTTCTCACTTG 54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAATCTGCCGGCCTCTACCTCCCAAGTGCTGGGATTTAAGGTGTGTGCCAAGTTTAGAGGTCTGGTaGGGTAGGGGATGGAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: SEICRPLPPKCWDLRCVPSLEVW*GRGWKA Trigger: GGCCTTCCATCCCCTACCCCACCAGACCTCTAAACT...TGGCACACACCTTAAATCCCAGCACTTGGGAGGTAGAGGCCGGCAGATTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR CCA 90 bp | ACACTATTACTGAGGCTATGGAGCACTCACAAAAAGAGACTTAGCATGGCTGCATGGTGGGGTAGGGGATaGAAGGCCGTGACACCCTCG | + |
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Preference number: 2 (lower is better) Translates to: TLLLRLWSTHKKRLSMAAWWGRG*KAVTPS Trigger: CGAGGGTGTCACGGCCTTCCATCCCCTACCCCACCA...TGCAGCCATGCTAAGTCTCTTTTTGTGAGTGCTCCATAGCCTCAGTAATAGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR CCA 90 bp | AACACCTCAGTTCCACTTGGGAGGGAGAAGAAATCAACCAAGAGGGAGAGTGAGTTTGCACCCAACCAATaGACAAAGGTTGCTGACCCC | + |
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Preference number: 2 (lower is better) Translates to: NTSVPLGREKKSTKRESEFAPNQ*TKVADP Trigger: GGGGTCAGCAACCTTTGTCCATTGGTTGGGTGCAAA...CTCACTCTCCCTCTTGGTTGATTTCTTCTCCCTCCCAAGTGGAACTGAGGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGTGATCCATCCAATAGGTGACTGTGAGCATCCACTTATGTTTGCTAGGCCCTTTGGAGGCTGGTTATaGGATGGATCCCTGGGTATG | + |
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Preference number: 2 (lower is better) Translates to: PVIHPIGDCEHPLMFARPFGGWL*DGSLGM Trigger: CATACCCAGGGATCCATCCCATAACCAGCCTCCAAA...GGGCCTAGCAAACATAAGTGGATGCTCACAGTCACCTATTGGATGGATCACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR TCA 90 bp | ACACTATTACTGAGGCTATGGAGCACTCACAAAAAGAGACTTAGCATGGCTGCAACTGCTCACAGAAGCTaGGGTCAGCTGGATGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: TLLLRLWSTHKKRLSMAATAHRS*GQLDAP Trigger: AGGAGCATCCAGCTGACCTCAGCTTCTGTGAGCAGT...TGCAGCCATGCTAAGTCTCTTTTTGTGAGTGCTCCATAGCCTCAGTAATAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGAAATCTGCCGGCCTCTACCTCCCAAGTGCTGGGATTTAAGGTGTGTGCCAGAGGCATATAAAGTTTaGAAGACCAATGGTCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: SEICRPLPPKCWDLRCVPEAYKV*KTNGPV Trigger: GACAGGACCATTGGTCTTGCAAACTTTATATGCCTC...TGGCACACACCTTAAATCCCAGCACTTGGGAGGTAGAGGCCGGCAGATTTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR CCA 90 bp | AACACCTCAGTTCCACTTGGGAGGGAGAAGAAATCAACCAAGAGGGAGAGTGAGGCAGGACCAGTTGCATaGCTTGCCTATGAACAACAT | + |
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Preference number: 2 (lower is better) Translates to: NTSVPLGREKKSTKRESEAGPVA*LAYEQH Trigger: ATGTTGTTCATAGGCAAGCCATGCAACTGGTCCTGC...CTCACTCTCCCTCTTGGTTGATTTCTTCTCCCTCCCAAGTGGAACTGAGGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAATCTGCCGGCCTCTACCTCCCAAGTGCTGGGATTTAAGGTGTGTGCCATTCATAATAGTTATCTaGCAGCTGGCGAGCCACAAA | + |
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Preference number: 2 (lower is better) Translates to: SEICRPLPPKCWDLRCVPFIIVI*QLASHK Trigger: TTTGTGGCTCGCCAGCTGCCAGATAACTATTATGAA...TGGCACACACCTTAAATCCCAGCACTTGGGAGGTAGAGGCCGGCAGATTTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGAAATCTGCCGGCCTCTACCTCCCAAGTGCTGGGATTTAAGGTGTGTGCCATCTGATGCAGATATTTaGACCCAACCAATGGACAAA | + |
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Preference number: 2 (lower is better) Translates to: SEICRPLPPKCWDLRCVPSDADI*TQPMDK Trigger: TTTGTCCATTGGTTGGGTGCAAATATCTGCATCAGA...TGGCACACACCTTAAATCCCAGCACTTGGGAGGTAGAGGCCGGCAGATTTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR CCA 90 bp | CCATTAGGAGTTAACATCCATTACCTGTCTCCACTCCACAGGTTCACTGATTATGGCAATCTTAGCAGGTaGGAGGTTGGGGGACTCTCT | + |
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Preference number: 2 (lower is better) Translates to: PLGVNIHYLSPLHRFTDYGNLSR*EVGGLS Trigger: AGAGAGTCCCCCAACCTCCCACCTGCTAAGATTGCC...ATAATCAGTGAACCTGTGGAGTGGAGACAGGTAATGGATGTTAACTCCTAATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR CAA 90 bp | TCATATATTTGTTCCACCTATAGGGTTGAAGATCCCTTTAGCTCCTaGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCAT | + |
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Preference number: 2 (lower is better) Translates to: SYICSTYRVEDPFSS*GTFSSSSIGGPVIH Trigger: ATGGATCACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTTCAACCCTATAGGTGGAACAAATATATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGATCCATCCAATAGGTGACTGTGAGCATCCACTTATGTTTGCTAGGCCCACAACAGAGGAATCTTaGATGGCTGAGAAACACCTA | + |
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Preference number: 2 (lower is better) Translates to: PVIHPIGDCEHPLMFARPTTEES*MAEKHL Trigger: TAGGTGTTTCTCAGCCATTCAAGATTCCTCTGTTGT...GGGCCTAGCAAACATAAGTGGATGCTCACAGTCACCTATTGGATGGATCACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGATCCATCCAATAGGTGACTGTGAGCATCCACTTATGTTTGCTAGGCCCGAGGTCTTTTGTGATTaGATTACCTCACTCAGGATG | + |
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Preference number: 2 (lower is better) Translates to: PVIHPIGDCEHPLMFARPEVFCD*ITSLRM Trigger: CATCCTGAGTGAGGTAATTCAATCACAAAAGACCTC...GGGCCTAGCAAACATAAGTGGATGCTCACAGTCACCTATTGGATGGATCACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR TCA 90 bp | AAAACACAGCAGAGCCAGAAGAACATCAAACCCAAAAATGGAGCACAGAAACTCGCCTTTGACCTCTACTaGGCAAGCTGTCACAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: KTQQSQKNIKPKNGAQKLAFDLY*ASCHSS Trigger: ACTGCTGTGACAGCTTGCTCAGTAGAGGTCAAAGGC...GAGTTTCTGTGCTCCATTTTTGGGTTTGATGTTCTTCTGGCTCTGCTGTGTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
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| 3UTR-3UTR GCA 90 bp | CACCAATGGAGTGTGCCTGTGGATCACATACACAACAGTAACTGCCAAGACCACGCAAGGAATTCTACATaGTTTGGCACACACTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: HQWSVPVDHIHNSNCQDHARNST*FGTHLF Trigger: GAACAAGTGTGTGCCAAAGCATGTAGAATTCCTTGC...GTGGTCTTGGCAGTTACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
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| 3UTR-3UTR CCA 90 bp | ACACTATTACTGAGGCTATGGAGCACTCACAAAAAGAGACTTAGCATGGCTGCATTTGCACCCAACCAATaGACAAAGGTTGCTGACCCC | + |
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Preference number: 2 (lower is better) Translates to: TLLLRLWSTHKKRLSMAAFAPNQ*TKVADP Trigger: GGGGTCAGCAACCTTTGTCCATTGGTTGGGTGCAAA...TGCAGCCATGCTAAGTCTCTTTTTGTGAGTGCTCCATAGCCTCAGTAATAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGTGAGAACACCTCAGTTCCACTTGGGAGGGAGAAGAAATCAACCAAGAGGGGAGGGAAGCATGATCTaGTATTTGTTGGGGAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: QVRTPQFHLGGRRNQPRGEGSMI*YLLGKK Trigger: CTTTTTCCCCAACAAATACCAGATCATGCTTCCCTC...CCCTCTTGGTTGATTTCTTCTCCCTCCCAAGTGGAACTGAGGTGTTCTCACTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCTATATCCTTCTCCTACCTGTCTTCCTGTCCCTGTACCCCTAAATTATCTACCTGAAATGTCCAAGTaGGAACACCTCAGTTCCACT | + |
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Preference number: 2 (lower is better) Translates to: PLYPSPTCLPVPVPLNYLPEMSK*EHLSST Trigger: AGTGGAACTGAGGTGTTCTCACTTGGACATTTCAGG...TAGATAATTTAGGGGTACAGGGACAGGAAGACAGGTAGGAGAAGGATATAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR TCA 90 bp | AAACCCAAACAACCCAATCAAAGAATGAGGTATAGAAATAAACTGAGAAGTCACAGTGCCAGAGTGACCTaGCGGGTCTTGCAGGACCAG | + |
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Preference number: 2 (lower is better) Translates to: KPKQPNQRMRYRNKLRSHSARVT*RVLQDQ Trigger: CTGGTCCTGCAAGACCCGTCAGGTCACTCTGGCACT...GTGACTTCTCAGTTTATTTCTATACCTCATTCTTTGATTGGGTTGTTTGGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGTGATCCATCCAATAGGTGACTGTGAGCATCCACTTATGTTTGCTAGGCCCACCTTCCTTTTTATCTaGCCAATCATCAGCTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: PVIHPIGDCEHPLMFARPTFLFI*PIISFP Trigger: AGGAAAGCTGATGATTGGGCAGATAAAAAGGAAGGT...GGGCCTAGCAAACATAAGTGGATGCTCACAGTCACCTATTGGATGGATCACAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAATCTGCCGGCCTCTACCTCCCAAGTGCTGGGATTTAAGGTGTGTGCCATCTCCTTACTTGTTCTaGGAAAATAACTGTAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: SEICRPLPPKCWDLRCVPSPYLF*ENNCKL Trigger: AAGCTTACAGTTATTTTCCCAGAACAAGTAAGGAGA...TGGCACACACCTTAAATCCCAGCACTTGGGAGGTAGAGGCCGGCAGATTTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGTGAGAACACCTCAGTTCCACTTGGGAGGGAGAAGAAATCAACCAAGAGGGGAATTCTACATGCTTTaGCACACACTTGTTCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: QVRTPQFHLGGRRNQPRGEFYML*HTLVLL Trigger: GAGAAGAACAAGTGTGTGCCAAAGCATGTAGAATTC...CCCTCTTGGTTGATTTCTTCTCCCTCCCAAGTGGAACTGAGGTGTTCTCACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR-3UTR TCA 90 bp | CCACACGTTGGTCTTTGTTCTTCTCGAGTTTCATGTGTTTTGCAAATTTTATCTTTGGGGAAAAAGGACTaGAACCCTGAGGGCCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PHVGLCSSRVSCVLQILSLGKKD*NPEGQQ Trigger: CTGCTGGCCCTCAGGGTTTCAGTCCTTTTTCCCCAA...AGATAAAATTTGCAAAACACATGAAACTCGAGAAGAACAAAGACCAACGTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTTTCGAACATTCTAGGAGGTAAGCATCTCACATCCCTCCTCTATATCCTTCCTGAAATGTCCAAGTaGGAACACCTCAGTTCCACT | + |
|
Preference number: 2 (lower is better) Translates to: SLSNILGGKHLTSLLYILPEMSK*EHLSST Trigger: AGTGGAACTGAGGTGTTCTCACTTGGACATTTCAGG...AAGGATATAGAGGAGGGATGTGAGATGCTTACCTCCTAGAATGTTCGAAAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTCTATATCCTTCTCCTACCTGTCTTCCTGTCCCTGTACCCCTAAATTATCTAGGAAATAGAACTACCTaGAGACCAGGTGTTGCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: PLYPSPTCLPVPVPLNYLGNRTT*RPGVAV Trigger: TACTGCAACACCTGGTCTTCAGGTAGTTCTATTTCC...TAGATAATTTAGGGGTACAGGGACAGGAAGACAGGTAGGAGAAGGATATAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR CCA 90 bp | CTAAAAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTGGCAATCTTAGCAGGTaGGAGGTTGGGGGACTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LKSVLSKNLSSSQFPSTAGNLSR*EVGGLS Trigger: AGAGAGTCCCCCAACCTCCCACCTGCTAAGATTGCC...AGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTTTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR CCA 90 bp | CCATTAGGAGTTAACATCCATTACCTGTCTCCACTCCACAGGTTCACTGATTATAATGGTGTCAGCATTTaGAGGCTGGTTATGGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: PLGVNIHYLSPLHRFTDYNGVSI*RLVMGW Trigger: CCATCCCATAACCAGCCTCCAAATGCTGACACCATT...ATAATCAGTGAACCTGTGGAGTGGAGACAGGTAATGGATGTTAACTCCTAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR CCA 90 bp | CTATTACTGAGGCTATGGAGCACTCACAAAAAGAGACTTAGCATGGCTGCACTCAATGGAGTGTGCCTGTaGATCACATACACAACAGTA | + |
|
Preference number: 2 (lower is better) Translates to: LLLRLWSTHKKRLSMAALNGVCL*ITYTTV Trigger: TACTGTTGTGTATGTGATCCACAGGCACACTCCATT...GAGTGCAGCCATGCTAAGTCTCTTTTTGTGAGTGCTCCATAGCCTCAGTAATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR-3UTR TCA 90 bp | CTAAAAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTAGCATGGCTGCACTCTaGAAGACCCAACATGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LKSVLSKNLSSSQFPSTASMAAL*KTQHAA Trigger: AGCTGCATGTTGGGTCTTTCAGAGTGCAGCCATGCT...AGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTTTCGAACATTCTAGGAGGTAAGCATCTCACATCCCTCCTCTATATCCTTCCCCTTACACCAATCTaGACAACAAAGAAGCAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SLSNILGGKHLTSLLYILPLTPI*TTKKQG Trigger: TCCTTGCTTCTTTGTTGTTCAGATTGGTGTAAGGGG...AAGGATATAGAGGAGGGATGTGAGATGCTTACCTCCTAGAATGTTCGAAAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR TCA 90 bp | CCATTAGGAGTTAACATCCATTACCTGTCTCCACTCCACAGGTTCACTGATTATCCCCTTACACCAATCTaGACAACAAAGAAGCAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PLGVNIHYLSPLHRFTDYPLTPI*TTKKQG Trigger: TCCTTGCTTCTTTGTTGTTCAGATTGGTGTAAGGGG...ATAATCAGTGAACCTGTGGAGTGGAGACAGGTAATGGATGTTAACTCCTAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAACACAGCAGAGCCAGAAGAACATCAAACCCAAAAATGGAGCACAGAAACTCTGGATGATAGCACTGTaGTTCCCAGAGACATCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: KTQQSQKNIKPKNGAQKLWMIAL*FPETSE Trigger: TTCAGATGTCTCTGGGAATCACAGTGCTATCATCCA...GAGTTTCTGTGCTCCATTTTTGGGTTTGATGTTCTTCTGGCTCTGCTGTGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR-3UTR GCA 90 bp | CCATTAGGAGTTAACATCCATTACCTGTCTCCACTCCACAGGTTCACTGATTATGAAACTCTAAGCAGTTaGTGGTGGGATGGTAAACTG | + |
|
Preference number: 2 (lower is better) Translates to: PLGVNIHYLSPLHRFTDYETLSS*WWDGKL Trigger: CAGTTTACCATCCCACCAGCAACTGCTTAGAGTTTC...ATAATCAGTGAACCTGTGGAGTGGAGACAGGTAATGGATGTTAACTCCTAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR GCA 90 bp | CTAAAAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTTCAGACTCAGAAATCTaGCGGCCTCTACCTCCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: LKSVLSKNLSSSQFPSTASDSEI*RPLPPK Trigger: CTTGGGAGGTAGAGGCCGGCAGATTTCTGAGTCTGA...AGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR GCA 90 bp | GACAATGTTCTTACTCTCAATGCCTTTTCTCCGAAAGCTAAACTTATACTTCTAAAGGCAAAAGCCCAGTaGCAGAGTGACCTGACGGGT | + |
|
Preference number: 2 (lower is better) Translates to: DNVLTLNAFSPKAKLILLKAKAQ*QSDLTG Trigger: ACCCGTCAGGTCACTCTGGCACTGGGCTTTTGCCTT...TAGAAGTATAAGTTTAGCTTTCGGAGAAAAGGCATTGAGAGTAAGAACATTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTCTTTCGAACATTCTAGGAGGTAAGCATCTCACATCCCTCCTCTATATCCTTCTAAGCAGTTGCTGGTaGGATGGTAAACTGGTACAA | + |
|
Preference number: 2 (lower is better) Translates to: SLSNILGGKHLTSLLYILLSSCW*DGKLVQ Trigger: TTGTACCAGTTTACCATCCCACCAGCAACTGCTTAG...AAGGATATAGAGGAGGGATGTGAGATGCTTACCTCCTAGAATGTTCGAAAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR CCA 90 bp | CCATTAGGAGTTAACATCCATTACCTGTCTCCACTCCACAGGTTCACTGATTATCTAAGCAGTTGCTGGTaGGATGGTAAACTGGTACAA | + |
|
Preference number: 2 (lower is better) Translates to: PLGVNIHYLSPLHRFTDYLSSCW*DGKLVQ Trigger: TTGTACCAGTTTACCATCCCACCAGCAACTGCTTAG...ATAATCAGTGAACCTGTGGAGTGGAGACAGGTAATGGATGTTAACTCCTAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTCAGTAGGAGGTATGGGATATaGAGTAGGAGGAACATGGAC | + |
|
Preference number: 2 (lower is better) Translates to: KVFCLKIYPHLSSLPQLSRRYGI*SRRNMD Trigger: GTCCATGTTCCTCCTACTTCATATCCCATACCTCCT...ACTGAGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCTTTCGAACATTCTAGGAGGTAAGCATCTCACATCCCTCCTCTATATCCTTACAACAGAGGAATCTTaGATGGCTGAGAAACACCTA | + |
|
Preference number: 2 (lower is better) Translates to: SLSNILGGKHLTSLLYILTTEES*MAEKHL Trigger: TAGGTGTTTCTCAGCCATTCAAGATTCCTCTGTTGT...AAGGATATAGAGGAGGGATGTGAGATGCTTACCTCCTAGAATGTTCGAAAGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR TCA 90 bp | CCATTAGGAGTTAACATCCATTACCTGTCTCCACTCCACAGGTTCACTGATTATCAGGGAGCATCCCTTTaGGAAATTTTCTATCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: PLGVNIHYLSPLHRFTDYQGASL*EIFYPV Trigger: AACTGGATAGAAAATTTCTCAAAGGGATGCTCCCTG...ATAATCAGTGAACCTGTGGAGTGGAGACAGGTAATGGATGTTAACTCCTAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTCAGTCCTAAGAGATCCAGACAATaGAAAAGACCAGCATCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: VFCLKIYPHLSSLPQLSPKRSRQ*KRPASQ Trigger: TTGGGATGCTGGTCTTTTTCATTGTCTGGATCTCTT...AGGACTGAGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTCTATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACGTCAGCAAACTATAGGTaGGAAATAAACTTCACTGAC | + |
|
Preference number: 2 (lower is better) Translates to: SFYGCFVPNSKKGQSVHTSANYR*EINFTD Trigger: GTCAGTGAAGTTTATTTCCCACCTATAGTTTGCTGA...CGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATAGAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAATCAAAGAATGAGGTATAGAAATAAACTGAGAAGTCACAACAGAGGAATCTCAGCATTTGGAGGCTaGTTATGGGATGGATCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: PNQRMRYRNKLRSHNRGISAFGG*LWDGSL Trigger: CAGGGATCCATCCCATAACCAGCCTCCAAATGCTGA...GATTCCTCTGTTGTGACTTCTCAGTTTATTTCTATACCTCATTCTTTGATTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTTTCGAACATTCTAGGAGGTAAGCATCTCACATCCCTCCTCTATATCCTTAAATCAAAACAATCTTaGGACTCCCCCTTACACCAA | + |
|
Preference number: 2 (lower is better) Translates to: SLSNILGGKHLTSLLYILKSKQS*DSPLHQ Trigger: TTGGTGTAAGGGGGAGTCTCAAGATTGTTTTGATTT...AAGGATATAGAGGAGGGATGTGAGATGCTTACCTCCTAGAATGTTCGAAAGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR TCA 90 bp | GACAATGTTCTTACTCTCAATGCCTTTTCTCCGAAAGCTAAACTTATACTTCTAATTCCCAGAGACATCTaGATGAGGAAGCTCAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: DNVLTLNAFSPKAKLILLIPRDI*MRKLSS Trigger: GGAGCTGAGCTTCCTCATTCAGATGTCTCTGGGAAT...TAGAAGTATAAGTTTAGCTTTCGGAGAAAAGGCATTGAGAGTAAGAACATTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTCAGTTTTCCACAGCCACATTaGATTTGCCTTTGGTGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: KVFCLKIYPHLSSLPQLSFPQPH*ICLWCS Trigger: TGAGCACCAAAGGCAAATTCAATGTGGCTGTGGAAA...ACTGAGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR-3UTR GCA 90 bp | CCATTAGGAGTTAACATCCATTACCTGTCTCCACTCCACAGGTTCACTGATTATAATCTTGGTAGTGTATaGAATGGTGTCAGCATTTGG | + |
|
Preference number: 2 (lower is better) Translates to: PLGVNIHYLSPLHRFTDYNLGSV*NGVSIW Trigger: CCAAATGCTGACACCATTGCATACACTACCAAGATT...ATAATCAGTGAACCTGTGGAGTGGAGACAGGTAATGGATGTTAACTCCTAATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTCAGTCCTCGTTTACATTTCCCATaGTATCCCAAAAGTTCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: VFCLKIYPHLSSLPQLSPRLHFP*YPKSSS Trigger: TGAGGAACTTTTGGGATAGCATGGGAAATGTAAACG...AGGACTGAGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR GCA 90 bp | GACAATGTTCTTACTCTCAATGCCTTTTCTCCGAAAGCTAAACTTATACTTCTACCTCTACCTCCCAAGTaGTGGGATTTAAGGTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: DNVLTLNAFSPKAKLILLPLPPK*WDLRCV Trigger: CACACACCTTAAATCCCAGCACTTGGGAGGTAGAGG...TAGAAGTATAAGTTTAGCTTTCGGAGAAAAGGCATTGAGAGTAAGAACATTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR CCA 90 bp | TACACACTGGAATACTACTCAGCTATTAAGAATGATGGCATCCTGAGTTTTGAACACCTCAGTTCCACTTaGGAGGGAGAAGAAATCAAC | + |
|
Preference number: 2 (lower is better) Translates to: YTLEYYSAIKNDGILSFEHLSST*EGEEIN Trigger: GTTGATTTCTTCTCCCTCCCAAGTGGAACTGAGGTG...TTCAAAACTCAGGATGCCATCATTCTTAATAGCTGAGTAGTATTCCAGTGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR-3UTR CCA 90 bp | ACACTATTACTGAGGCTATGGAGCACTCACAAAAAGAGACTTAGCATGGCTGCACCAAAAGGAAAGTCATaGAATGTACTCACTAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: TLLLRLWSTHKKRLSMAAPKGKS*NVLTSK Trigger: CTTACTAGTGAGTACATTCCATGACTTTCCTTTTGG...TGCAGCCATGCTAAGTCTCTTTTTGTGAGTGCTCCATAGCCTCAGTAATAGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| 3UTR CAA 90 bp | CTTCCACAGCTCAGTCCTTTTCACCTTAGTCCCTCTCTCTTCTCTTaGTCCTCAGTACTTAAACATCTTTCAGAATATGTGATCAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: LPQLSPFHLSPSLFS*SSVLKHLSEYVINV Trigger: AACATTGATCACATATTCTGAAAGATGTTTAAGTACTGAGGACAAAGAGAAGAGAGAGGGACTAAGGTGAAAAGGACTGAGCTGTGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR TCA 90 bp | GACAATGTTCTTACTCTCAATGCCTTTTCTCCGAAAGCTAAACTTATACTTCTAAGGAGGTATGGGATATaGAGTAGGAGGAACATGGAC | + |
|
Preference number: 2 (lower is better) Translates to: DNVLTLNAFSPKAKLILLRRYGI*SRRNMD Trigger: GTCCATGTTCCTCCTACTTCATATCCCATACCTCCT...TAGAAGTATAAGTTTAGCTTTCGGAGAAAAGGCATTGAGAGTAAGAACATTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTCAGTAGTTTGCCCCAGCAATaGAAACAGGACTCAGTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: KVFCLKIYPHLSSLPQLSSLPQQ*KQDSVN Trigger: ATTAACTGAGTCCTGTTTTCATTGCTGGGGCAAACT...ACTGAGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTCAGTCAGGGAGCATCCCTTTaGGAAATTTTCTATCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: KVFCLKIYPHLSSLPQLSQGASL*EIFYPV Trigger: AACTGGATAGAAAATTTCTCAAAGGGATGCTCCCTG...ACTGAGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR GCA 90 bp | CCACACGTTGGTCTTTGTTCTTCTCGAGTTTCATGTGTTTTGCAAATTTTATCTCTGAAGACCAGGTGTTaGAGTAAATCTCTTGATCCC | + |
|
Preference number: 2 (lower is better) Translates to: PHVGLCSSRVSCVLQILSLKTRC*SKSLDP Trigger: GGGATCAAGAGATTTACTGCAACACCTGGTCTTCAG...AGATAAAATTTGCAAAACACATGAAACTCGAGAAGAACAAAGACCAACGTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR GCA 90 bp | CTAAAAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTCTTTTTCTCTCCCCCTaGTCTGAAGTCATGACAATG | + |
|
Preference number: 2 (lower is better) Translates to: LKSVLSKNLSSSQFPSTALFLSP*SEVMTM Trigger: CATTGTCATGACTTCAGAGCAGGGGGAGAGAAAAAG...AGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTTTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTCAGTCCTTCTCAGATGATTTaGCAAGCTCCTAATGACATG | + |
|
Preference number: 2 (lower is better) Translates to: KVFCLKIYPHLSSLPQLSPSQMI*QAPNDM Trigger: CATGTCATTAGGAGCTTGCCAAATCATCTGAGAAGG...ACTGAGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTCCGGAAGGTACTGGTTAGTTCATATATTTGTTCCACCTATAGGGTTGAACAGTCTTTCCAAGAATaGAAGACAAACAAAGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: ELRKVLVSSYICSTYRVEQSFQE*KTNKGK Trigger: TTTGCCTTTGTTTGTCTTCCATTCTTGGAAAGACTG...TTCAACCCTATAGGTGGAACAAATATATGAACTAACCAGTACCTTCCGGAGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR CAA 90 bp | TGGGATGGTAAACTGGTACAATTACTCTGGAAATCAATCTGGAGTTaGTTCAGAAAATTGGAAATAGAACTACCTGAAGACCAGGTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: WDGKLVQLLWKSIWS*FRKLEIELPEDQVL Trigger: CAACACCTGGTCTTCAGGTAGTTCTATTTCCAATTTTCTGAACAAACTCCAGATTGATTTCCAGAGTAATTGTACCAGTTTACCATCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR GCA 90 bp | CTAAAAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTTCAGTCACTGTGCAATaGATGTGCCTTCAATTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LKSVLSKNLSSSQFPSTASVTVQ*MCLQFL Trigger: CAAGAATTGAAGGCACATGCATTGCACAGTGACTGA...AGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTTTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR-3UTR GCA 90 bp | GACAATGTTCTTACTCTCAATGCCTTTTCTCCGAAAGCTAAACTTATACTTCTATTCACCAATGGAGTGTaGCTGTGGATCACATACACA | + |
|
Preference number: 2 (lower is better) Translates to: DNVLTLNAFSPKAKLILLFTNGV*LWITYT Trigger: TGTGTATGTGATCCACAGGCACACTCCATTGGTGAA...TAGAAGTATAAGTTTAGCTTTCGGAGAAAAGGCATTGAGAGTAAGAACATTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCAATCAAAGAATGAGGTATAGAAATAAACTGAGAAGTCACAACAGAGGAATCGAAGTAGGAGGAACATaGACAGGGAAGGGAATAAAA | + |
|
Preference number: 2 (lower is better) Translates to: PNQRMRYRNKLRSHNRGIEVGGT*TGKGIK Trigger: TTTTATTCCCTTCCCTGTCCATGTTCCTCCTACTTC...GATTCCTCTGTTGTGACTTCTCAGTTTATTTCTATACCTCATTCTTTGATTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR TCA 90 bp | CCACACGTTGGTCTTTGTTCTTCTCGAGTTTCATGTGTTTTGCAAATTTTATCTATAAGTTCAACGACCTaGAATGTCCAAGTGAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: PHVGLCSSRVSCVLQILSISSTT*NVQVRT Trigger: TGTTCTCACTTGGACATTTCAGGTCGTTGAACTTAT...AGATAAAATTTGCAAAACACATGAAACTCGAGAAGAACAAAGACCAACGTGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR GCA 90 bp | GACAATGTTCTTACTCTCAATGCCTTTTCTCCGAAAGCTAAACTTATACTTCTAGAGGCATATAAAGTTTaGAAGACCAATGGTCCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: DNVLTLNAFSPKAKLILLEAYKV*KTNGPV Trigger: GACAGGACCATTGGTCTTGCAAACTTTATATGCCTC...TAGAAGTATAAGTTTAGCTTTCGGAGAAAAGGCATTGAGAGTAAGAACATTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR GCA 90 bp | CTAAAAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTCGTTTACATTTCCCATaGTATCCCAAAAGTTCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LKSVLSKNLSSSQFPSTARLHFP*YPKSSS Trigger: TGAGGAACTTTTGGGATAGCATGGGAAATGTAAACG...AGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTTTTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCAATCAAAGAATGAGGTATAGAAATAAACTGAGAAGTCACAACAGAGGAATCACACTTGTTCTTCTCTaGATTGGACCAGTCATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: PNQRMRYRNKLRSHNRGITLVLL*IGPVIF Trigger: GAAAATGACTGGTCCAATGCAGAGAAGAACAAGTGT...GATTCCTCTGTTGTGACTTCTCAGTTTATTTCTATACCTCATTCTTTGATTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR-3UTR CCA 90 bp | AAACCCAAACAACCCAATCAAAGAATGAGGTATAGAAATAAACTGAGAAGTCACGAAGTAGGAGGAACATaGACAGGGAAGGGAATAAAA | + |
|
Preference number: 2 (lower is better) Translates to: KPKQPNQRMRYRNKLRSHEVGGT*TGKGIK Trigger: TTTTATTCCCTTCCCTGTCCATGTTCCTCCTACTTC...GTGACTTCTCAGTTTATTTCTATACCTCATTCTTTGATTGGGTTGTTTGGGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTCAGTAGCTCCGGAAGGTACTaGTTAGTTCATATATTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: KVFCLKIYPHLSSLPQLSSSGRY*LVHIFV Trigger: AACAAATATATGAACTAACCAGTACCTTCCGGAGCT...ACTGAGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CAA 90 bp | AAGTGTCCACACGTTGGTCTTTGTTCTTCTCGAGTTTCATGTGTTTaGCAAATTTTATCTTATATCTTGTGTATTCTAAGTTTCTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: KCPHVGLCSSRVSCV*QILSYILCILSFWA Trigger: GGCCCAGAAACTTAGAATACACAAGATATAAGATAAAATTTGCAAAACACATGAAACTCGAGAAGAACAAAGACCAACGTGTGGACACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR TCA 90 bp | AAACCCAAACAACCCAATCAAAGAATGAGGTATAGAAATAAACTGAGAAGTCACAAATCAAAACAATCTTaGGACTCCCCCTTACACCAA | + |
|
Preference number: 2 (lower is better) Translates to: KPKQPNQRMRYRNKLRSHKSKQS*DSPLHQ Trigger: TTGGTGTAAGGGGGAGTCTCAAGATTGTTTTGATTT...GTGACTTCTCAGTTTATTTCTATACCTCATTCTTTGATTGGGTTGTTTGGGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR TCA 90 bp | AAACCCAAACAACCCAATCAAAGAATGAGGTATAGAAATAAACTGAGAAGTCACCCAGCATCCCAAAAGTaGTACATTTCCCTTCATAAT | + |
|
Preference number: 2 (lower is better) Translates to: KPKQPNQRMRYRNKLRSHPASQK*YISLHN Trigger: ATTATGAAGGGAAATGTATCACTTTTGGGATGCTGG...GTGACTTCTCAGTTTATTTCTATACCTCATTCTTTGATTGGGTTGTTTGGGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR-3UTR GCA 90 bp | AAACCCAAACAACCCAATCAAAGAATGAGGTATAGAAATAAACTGAGAAGTCACTCTGATGCAGATATTTaGACCCAACCAATGGACAAA | + |
|
Preference number: 2 (lower is better) Translates to: KPKQPNQRMRYRNKLRSHSDADI*TQPMDK Trigger: TTTGTCCATTGGTTGGGTGCAAATATCTGCATCAGA...GTGACTTCTCAGTTTATTTCTATACCTCATTCTTTGATTGGGTTGTTTGGGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCAATCAAAGAATGAGGTATAGAAATAAACTGAGAAGTCACAACAGAGGAATCAGCTCCGGAAGGTACTaGTTAGTTCATATATTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: PNQRMRYRNKLRSHNRGISSGRY*LVHIFV Trigger: AACAAATATATGAACTAACCAGTACCTTCCGGAGCT...GATTCCTCTGTTGTGACTTCTCAGTTTATTTCTATACCTCATTCTTTGATTGGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR CCA 90 bp | GACAATGTTCTTACTCTCAATGCCTTTTCTCCGAAAGCTAAACTTATACTTCTACCAAAAGGAAAGTCATaGAATGTACTCACTAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: DNVLTLNAFSPKAKLILLPKGKS*NVLTSK Trigger: CTTACTAGTGAGTACATTCCATGACTTTCCTTTTGG...TAGAAGTATAAGTTTAGCTTTCGGAGAAAAGGCATTGAGAGTAAGAACATTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR CCA 90 bp | GACAATGTTCTTACTCTCAATGCCTTTTCTCCGAAAGCTAAACTTATACTTCTATCTCCTTACTTGTTCTaGGAAAATAACTGTAAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: DNVLTLNAFSPKAKLILLSPYLF*ENNCKL Trigger: AAGCTTACAGTTATTTTCCCAGAACAAGTAAGGAGA...TAGAAGTATAAGTTTAGCTTTCGGAGAAAAGGCATTGAGAGTAAGAACATTGTC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CCA 72 bp | CTCAAGAGACAGAAAGCCCTAGGTAGTTTAGAGGTCTaGTGGGGTAGGGGATGGAAGGCCGTGACACCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: LKRQKALGSLEV*WGRGWKAVTPS Trigger: CGAGGGTGTCACGGCCTTCCATCCCCTACCCCACCAGACCTCTAAACTACCTAGGGCTTTCTGTCTCTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR TCA 72 bp | GGGGGACTCTCTATAATGTACCAGAGACCTGGGAGGTaGGAGACTCTCAGGACCCAAAGGGAGGGAGCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: GGLSIMYQRPGR*ETLRTQREGAR Trigger: TCTAGCTCCCTCCCTTTGGGTCCTGAGAGTCTCTCACCTCCCAGGTCTCTGGTACATTATAGAGAGTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR GCA 72 bp | TCAGACTCAGAAATCTGCCGGCCTCTACCTCCCAAGTaGTGGGATTTAAGGTGTGTGCCACCACCATCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SDSEICRPLPPK*WDLRCVPPPSS Trigger: GCTGGATGGTGGTGGCACACACCTTAAATCCCAGCACTTGGGAGGTAGAGGCCGGCAGATTTCTGAGTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR TCA 72 bp | TGGAAGACAAACAAAGGCAAAAGCCCAGTGCCAGAGTaGCCTGACGGGTCTTGCAGGACCAGTTGCATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: WKTNKGKSPVPE*PDGSCRTSCMA Trigger: AGCCATGCAACTGGTCCTGCAAGACCCGTCAGGTCACTCTGGCACTGGGCTTTTGCCTTTGTTTGTCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR CCA 72 bp | CCACTCCCCTTCCCACCAACTCCCACTTCTTGGCCCTaGTGTTCCCCTGTACTGAGGCATATAAAGTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PLPFPPTPTSWP*CSPVLRHIKFA Trigger: TGCAAACTTTATATGCCTCAGTACAGGGGAACACCAGGGCCAAGAAGTGGGAGTTGGTGGGAAGGGGAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR GCA 72 bp | GCCATTATCCAGCTTTGCATGTCACATGGATCTCACTaGTCTACTCATCCAGGACAGTGGACACCGTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: AIIQLCMSHGSH*STHPGQWTPWC Trigger: GCACCACGGTGTCCACTGTCCTGGATGAGTAGAGCAGTGAGATCCATGTGACATGCAAAGCTGGATAATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR CCA 72 bp | CAGAAGCTGAGGTCAGCTGGATGCTCCTGTCAACAGTaGGGACTCTTCCACCAACAGTTTCATCAGTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QKLRSAGCSCQQ*GLFHQQFHQCS Trigger: GGAACACTGATGAAACTGTTGGTGGAAGAGTCCCCACTGTTGACAGGAGCATCCAGCTGACCTCAGCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGAAATCTGCCGGCCTCTACCTCCCAAGTGCTGGGATTTAAGGTGTGTGCCAGTGATGACTCATTCCTaGTTCAAAGCCTCTCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: SEICRPLPPKCWDLRCVPVMTHS*FKASHR Trigger: CCTGTGAGAGGCTTTGAACAAGGAATGAGTCATCAC...TGGCACACACCTTAAATCCCAGCACTTGGGAGGTAGAGGCCGGCAGATTTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGTTGGGGGACTCTCTATAATGTACCAGAGACCTGGGAGGTGAGAGACTCTTGCTTTGGCACACACTaGTTCTTCTCTGCATTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GGWGTLYNVPETWEVRDSCFGTH*FFSALD Trigger: GTCCAATGCAGAGAAGAACAAGTGTGTGCCAAAGCA...AGAGTCTCTCACCTCCCAGGTCTCTGGTACATTATAGAGAGTCCCCCAACCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR GCA 72 bp | CTCAGCTCCCGGTCATTGGCTTTCACCAATGGAGTGTaGCTGTGGATCACATACACAACAGTAACTGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSSRSLAFTNGV*LWITYTTVTAK Trigger: CTTGGCAGTTACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTGAAAGCCAATGACCGGGAGCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR CCA 72 bp | GGGAGGCCCCAAGACCTGACACTATTACTGAGGCTATaGAGCACTCACAAAAAGAGACTTAGCATGGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GRPQDLTLLLRL*STHKKRLSMAA Trigger: TGCAGCCATGCTAAGTCTCTTTTTGTGAGTGCTCCATAGCCTCAGTAATAGTGTCAGGTCTTGGGGCCTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CCA 72 bp | GAGGAAGCTCAGCTCCCGGTCATTGGCTTTCACCAATaGAGTGTGCCTGTGGATCACATACACAACAGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: EEAQLPVIGFHQ*SVPVDHIHNSN Trigger: GTTACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR GCA 72 bp | GCCCTGGTGTTCCCCTGTACTGAGGCATATAAAGTTTaGAAGACCAATGGTCCTGTCTTTCCACTGATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ALVFPCTEAYKV*KTNGPVFPLMA Trigger: AGCCATCAGTGGAAAGACAGGACCATTGGTCTTGCAAACTTTATATGCCTCAGTACAGGGGAACACCAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CCA 72 bp | TTGGTAGTGTATGCAATGGTGTCAGCATTTGGAGGCTaGTTATGGGATGGATCCCTGGGTATGGCAGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LVVYAMVSAFGG*LWDGSLGMAVS Trigger: AGAGACTGCCATACCCAGGGATCCATCCCATAACCAGCCTCCAAATGCTGACACCATTGCATACACTACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CCA 72 bp | TCCCGGTCATTGGCTTTCACCAATGGAGTGTGCCTGTaGATCACATACACAACAGTAACTGCCAAGACCACA | + |
|
Preference number: 3 (lower is better) Translates to: SRSLAFTNGVCL*ITYTTVTAKTT Trigger: TGTGGTCTTGGCAGTTACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTGAAAGCCAATGACCGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR TCA 72 bp | TTTCACCACATGGATCACATAGCCTTTGACCTCTACTaGGCAAGCTGTCACAGCAGTCCAAGTCTCAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: FHHMDHIAFDLY*ASCHSSPSLSH Trigger: GTGACTGAGACTTGGACTGCTGTGACAGCTTGCTCAGTAGAGGTCAAAGGCTATGTGATCCATGTGGTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR TCA 72 bp | AACATGGATGATAGCACTGTGATTCCCAGAGACATCTaGATGAGGAAGCTCAGCTCCCGGTCATTGGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: NMDDSTVIPRDI*MRKLSSRSLAF Trigger: GAAAGCCAATGACCGGGAGCTGAGCTTCCTCATTCAGATGTCTCTGGGAATCACAGTGCTATCATCCATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR CCA 72 bp | CCAGCAGAAAGAATGGAAACAGGCAATCTTAGCAGGTaGGAGGTTGGGGGACTCTCTATAATGTACCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PAERMETGNLSR*EVGGLSIMYQR Trigger: TCTCTGGTACATTATAGAGAGTCCCCCAACCTCCCACCTGCTAAGATTGCCTGTTTCCATTCTTTCTGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTCAGTCCTAGCATCCACTTATGTTaGCTAGGCCCCGGCATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: VFCLKIYPHLSSLPQLSPSIHLC*LGPGIA Trigger: GGCTATGCCGGGGCCTAGCAAACATAAGTGGATGCT...AGGACTGAGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTCAGTACCAACTCCCACTTCTaGGCCCTGGTGTTCCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KVFCLKIYPHLSSLPQLSTNSHF*ALVFPC Trigger: ACAGGGGAACACCAGGGCCAAGAAGTGGGAGTTGGT...ACTGAGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTGAGAACACCTCAGTTCCACTTGGGAGGGAGAAGAAATCAACCAAGAGGGTTGTTCTTCTCTGCATaGGACCAGTCATTTTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: QVRTPQFHLGGRRNQPRGLFFSA*DQSFSP Trigger: TGGTGAAAATGACTGGTCCAATGCAGAGAAGAACAA...CCCTCTTGGTTGATTTCTTCTCCCTCCCAAGTGGAACTGAGGTGTTCTCACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR GCA 72 bp | AGCAAGCTGTCACAGCAGTCCAAGTCTCAGTCACTGTaGAATGCATGTGCCTTCAATTCTTGGAACCTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SKLSQQSKSQSL*NACAFNSWNLK Trigger: CTTAAGGTTCCAAGAATTGAAGGCACATGCATTGCACAGTGACTGAGACTTGGACTGCTGTGACAGCTTGCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR CCA 72 bp | CATTTGGAGGCTGGTTATGGGATGGATCCCTGGGTATaGCAGTCTCTAGATAGTTCATCCTTTTGTTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: HLEAGYGMDPWV*QSLDSSSFCFS Trigger: GCTGAAACAAAAGGATGAACTATCTAGAGACTGCCATACCCAGGGATCCATCCCATAACCAGCCTCCAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CCA 72 bp | TGTCAGCATTTGGAGGCTGGTTATGGGATGGATCCCTaGGTATGGCAGTCTCTAGATAGTTCATCCTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: CQHLEAGYGMDP*VWQSLDSSSFC Trigger: ACAAAAGGATGAACTATCTAGAGACTGCCATACCCAGGGATCCATCCCATAACCAGCCTCCAAATGCTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR TCA 72 bp | AGCACTCACAAAAAGAGACTTAGCATGGCTGCACTCTaGAAGACCCAACATGCAGCTGAAAAGTCTGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: STHKKRLSMAAL*KTQHAAEKSDA Trigger: TGCATCAGACTTTTCAGCTGCATGTTGGGTCTTTCAGAGTGCAGCCATGCTAAGTCTCTTTTTGTGAGTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR TCA 72 bp | GTGAGGTCTTTTGTGATTGAATTACCTCACTCAGGATaGTGCCCTCCAGGTCCAAATCCATCCTTTTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VRSFVIELPHSG*CPPGPNPSFCL Trigger: GAGACAAAAGGATGGATTTGGACCTGGAGGGCATCATCCTGAGTGAGGTAATTCAATCACAAAAGACCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CCA 72 bp | CTGAAAAGTCTGATGCAGATATTTGCACCCAACCAATaGACAAAGGTTGCTGACCCCGTGTTTGAATTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LKSLMQIFAPNQ*TKVADPVFELG Trigger: CCCTAATTCAAACACGGGGTCAGCAACCTTTGTCCATTGGTTGGGTGCAAATATCTGCATCAGACTTTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CCA 72 bp | CTACTGTGTTATTTAAAAAGGACCTGTTCTGTCCCATaGTCAGAAGTCTGCCTGCTCCTTCTGCTCTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LLCYLKRTCSVP*SEVCLLLLLSV Trigger: TACAGAGAGCAGAAGGAGCAGGCAGACTTCTGACCATGGGACAGAACAGGTCCTTTTTAAATAACACAGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR TCA 72 bp | ATCAGTGAGTACATATCATGTGAGGTCTTTTGTGATTaGATTACCTCACTCAGGATGATGCCCTCCAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ISEYISCEVFCD*ITSLRMMPSRS Trigger: GGACCTGGAGGGCATCATCCTGAGTGAGGTAATTCAATCACAAAAGACCTCACATGATATGTACTCACTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR GCA 72 bp | AAGCAAGGATGTGTGGAAAGAGAAACTCTAAGCAGTTaGTGGTGGGATGGTAAACTGGTACAATTACTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: KQGCVERETLSS*WWDGKLVQLLW Trigger: CCAGAGTAATTGTACCAGTTTACCATCCCACCAGCAACTGCTTAGAGTTTCTCTTTCCACACATCCTTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CCA 72 bp | CCCAAAAGTGATACATTTCCCTTCATAATAGTTATCTaGCAGCTGGCGAGCCACAAAGGTGGTAGCAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: PKSDTFPFIIVI*QLASHKGGSKT Trigger: TGTTTTGCTACCACCTTTGTGGCTCGCCAGCTGCCAGATAACTATTATGAAGGGAAATGTATCACTTTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTATATCCTTCTCCTACCTGTCTTCCTGTCCCTGTACCCCTAAATTATCTACAAATCAAAACAATCTaGAGACTCCCCCTTACACCA | + |
|
Preference number: 3 (lower is better) Translates to: PLYPSPTCLPVPVPLNYLQIKTI*RLPLTP Trigger: TGGTGTAAGGGGGAGTCTCAAGATTGTTTTGATTTG...TAGATAATTTAGGGGTACAGGGACAGGAAGACAGGTAGGAGAAGGATATAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR CAA 90 bp | CCATTAGGAGTTAACATCCATTACCTGTCTCCACTCCACAGGTTCACTGATTATATTTCCACAGCCACATaGAATTTGCCTTTGGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PLGVNIHYLSPLHRFTDYISTAT*NLPLVL Trigger: GAGCACCAAAGGCAAATTCAATGTGGCTGTGGAAAT...ATAATCAGTGAACCTGTGGAGTGGAGACAGGTAATGGATGTTAACTCCTAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR GCA 72 bp | GAATTCTACATGCTTTGGCACACACTTGTTCTTCTCTaGATTGGACCAGTCATTTTCACCACATGGATCACA | + |
|
Preference number: 3 (lower is better) Translates to: EFYMLWHTLVLL*IGPVIFTTWIT Trigger: TGTGATCCATGTGGTGAAAATGACTGGTCCAATGCAGAGAAGAACAAGTGTGTGCCAAAGCATGTAGAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| 3UTR CCA 72 bp | GGATGTGTGGAAAGAGAAACTCTAAGCAGTTGCTGGTaGGATGGTAAACTGGTACAATTACTCTGGAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: GCVERETLSSCW*DGKLVQLLWKS Trigger: TGATTTCCAGAGTAATTGTACCAGTTTACCATCCCACCAGCAACTGCTTAGAGTTTCTCTTTCCACACATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CCA 72 bp | CAAGGATGTGTGGAAAGAGAAACTCTAAGCAGTTGCTaGTGGGATGGTAAACTGGTACAATTACTCTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QGCVERETLSSC*WDGKLVQLLWK Trigger: TTTCCAGAGTAATTGTACCAGTTTACCATCCCACCAGCAACTGCTTAGAGTTTCTCTTTCCACACATCCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CCA 72 bp | TTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACGTTaGTCTTTGTTCTTCTCGAGTTTCATGTGTTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: FPILRRGKVSTR*SLFFSSFMCFA Trigger: TGCAAAACACATGAAACTCGAGAAGAACAAAGACCAACGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTCTATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACGCTAACATCTCCTTACTaGTTCTGGGAAAATAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: SFYGCFVPNSKKGQSVHTLTSPY*FWENNC Trigger: ACAGTTATTTTCCCAGAACAAGTAAGGAGATGTTAG...CGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATAGAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTATATCCTTCTCCTACCTGTCTTCCTGTCCCTGTACCCCTAAATTATCTATCCAAATCCATCCTTTaGTCTCTTGTAGTTCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PLYPSPTCLPVPVPLNYLSKSIL*SLVVLL Trigger: AAGGAGAACTACAAGAGACAAAAGGATGGATTTGGA...TAGATAATTTAGGGGTACAGGGACAGGAAGACAGGTAGGAGAAGGATATAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR TCA 72 bp | AGATACAGTCCACAGAATTCTATAAGTTCAACGACCTaGAATGTCCAAGTGAGAACACCTCAGTTCCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: RYSPQNSISSTT*NVQVRTPQFHL Trigger: CAAGTGGAACTGAGGTGTTCTCACTTGGACATTTCAGGTCGTTGAACTTATAGAATTCTGTGGACTGTATCT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR TCA 72 bp | GCAGTAAATCTCTTGATCCCAAGTTTGCCCCAGCAATaGAAACAGGACTCAGTTAATATGATTACATGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: AVNLLIPSLPQQ*KQDSVNMITCW Trigger: CCAGCATGTAATCATATTAACTGAGTCCTGTTTTCATTGCTGGGGCAAACTTGGGATCAAGAGATTTACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAAAAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTGTTCCACCTATAGGGTaGAAGATCCCTTTAGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LKSVLSKNLSSSQFPSTAVPPIG*KIPLAP Trigger: AGGAGCTAAAGGGATCTTCAACCCTATAGGTGGAAC...AGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTCAGTCAAATCAAAACAATCTaGAGACTCCCCCTTACACCA | + |
|
Preference number: 3 (lower is better) Translates to: KVFCLKIYPHLSSLPQLSQIKTI*RLPLTP Trigger: TGGTGTAAGGGGGAGTCTCAAGATTGTTTTGATTTG...ACTGAGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTCAGTCCTTTCAGCAAAATCTaGGTAGTGTATGCAATGGTG | + |
|
Preference number: 3 (lower is better) Translates to: KVFCLKIYPHLSSLPQLSPFSKI*VVYAMV Trigger: CACCATTGCATACACTACCAAGATTTTGCTGAAAGG...ACTGAGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR TCA 72 bp | ATCAAAACAATCTTGAGACTCCCCCTTACACCAATCTaGACAACAAAGAAGCAAGGATGTGTGGAAAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: IKTILRLPLTPI*TTKKQGCVERE Trigger: TTCTCTTTCCACACATCCTTGCTTCTTTGTTGTTCAGATTGGTGTAAGGGGGAGTCTCAAGATTGTTTTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR GCA 72 bp | TGCTTGAAAAACAATGTTCAGAGGAAGATTGAGCTATaGCATTATCCAGCTTTGCATGTCACATGGATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: CLKNNVQRKIEL*HYPALHVTWIS Trigger: TGAGATCCATGTGACATGCAAAGCTGGATAATGGCATAGCTCAATCTTCCTCTGAACATTGTTTTTCAAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR GCA 72 bp | CCGGGGTCCCATTTATCAATTCTTGATCTTAGAGTATaGACCATTGGCTTCTTTAAGGAAAAAGACATAGTA | + |
|
Preference number: 3 (lower is better) Translates to: PGSHLSILDLRV*TIGFFKEKDIV Trigger: TACTATGTCTTTTTCCTTAAAGAAGCCAATGGTGCATACTCTAAGATCAAGAATTGATAAATGGGACCCCGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CCA 72 bp | ATTAAGAATGATGGCATCCTGAGTTTTGAAGGCAAATaGATGGAACTAGAAAATATCATCCTGAGTGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: IKNDGILSFEGK*MELENIILSEG Trigger: ACCCTCACTCAGGATGATATTTTCTAGTTCCATCCATTTGCCTTCAAAACTCAGGATGCCATCATTCTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR TCA 72 bp | AAACTGAGAAGTCACAACAGAGGAATCTTGAATGGCTaGGAAACACCTAAAGAAATGTTCAAAGTCCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: KLRSHNRGILNG*ETPKEMFKVLC Trigger: ACAAAGGACTTTGAACATTTCTTTAGGTGTTTCTCAGCCATTCAAGATTCCTCTGTTGTGACTTCTCAGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CCA 72 bp | AAAAATGGATACAGAAAATCTGGTTCATTTACACACTaGAATACTACTCAGCTATTAAGAATGATGGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: KNGYRKSGSFTH*NTTQLLRMMAS Trigger: GGATGCCATCATTCTTAATAGCTGAGTAGTATTCCAGTGTGTAAATGAACCAGATTTTCTGTATCCATTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR TCA 90 bp | AACACCTCAGTTCCACTTGGGAGGGAGAAGAAATCAACCAAGAGGGAGAGTGAGAGTGCCAGAGTGACCTaGCGGGTCTTGCAGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTSVPLGREKKSTKRESESARVT*RVLQDQ Trigger: CTGGTCCTGCAAGACCCGTCAGGTCACTCTGGCACT...CTCACTCTCCCTCTTGGTTGATTTCTTCTCCCTCCCAAGTGGAACTGAGGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175724.9 |
||
| CDS-3UTR CCA 90 bp | TCAGAAATCTGCCGGCCTCTACCTCCCAAGTGCTGGGATTTAAGGTGTGTGCCAACGATGGCCTCAGACTaGAACTTGTCACTGGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: SEICRPLPPKCWDLRCVPTMASD*NLSLGI Trigger: AATACCCAGTGACAAGTTCCAGTCTGAGGCCATCGT...TGGCACACACCTTAAATCCCAGCACTTGGGAGGTAGAGGCCGGCAGATTTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CAA 72 bp | TGTTCCACCTATAGGGTTGAAGATCCCTTTAGCTCCTaGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSTYRVEDPFSS*GTFSSSSIGGP Trigger: AGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTTCAACCCTATAGGTGGAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR TCA 90 bp | AACACCTCAGTTCCACTTGGGAGGGAGAAGAAATCAACCAAGAGGGAGAGTGAGATTCCCAGAGACATCTaGATGAGGAAGCTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTSVPLGREKKSTKRESEIPRDI*MRKLSS Trigger: GGAGCTGAGCTTCCTCATTCAGATGTCTCTGGGAAT...CTCACTCTCCCTCTTGGTTGATTTCTTCTCCCTCCCAAGTGGAACTGAGGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175724.9 |
||
| CDS-3UTR GCA 90 bp | GGAGGTTGGGGGACTCTCTATAATGTACCAGAGACCTGGGAGGTGAGAGACTCTGAGGACACACTTTTGTaGAAACTGAATCTGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGWGTLYNVPETWEVRDSEDTLL*KLNLEA Trigger: GGCTTCCAGATTCAGTTTGCACAAAAGTGTGTCCTC...AGAGTCTCTCACCTCCCAGGTCTCTGGTACATTATAGAGAGTCCCCCAACCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR CCA 90 bp | CACCAATGGAGTGTGCCTGTGGATCACATACACAACAGTAACTGCCAAGACCACAAGCCACACAAAGGTTaGCCCTCTCCATTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HQWSVPVDHIHNSNCQDHKPHKG*PSPFLP Trigger: GGGAAGAAATGGAGAGGGCCAACCTTTGTGTGGCTT...GTGGTCTTGGCAGTTACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| CDS-3UTR TCA 90 bp | TCAGAAATCTGCCGGCCTCTACCTCCCAAGTGCTGGGATTTAAGGTGTGTGCCATTGCATAAAGCACAATaGCTTTGGCAGTGGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SEICRPLPPKCWDLRCVPLHKAQ*LWQWNS Trigger: AGAGTTCCACTGCCAAAGTCATTGTGCTTTATGCAA...TGGCACACACCTTAAATCCCAGCACTTGGGAGGTAGAGGCCGGCAGATTTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR TCA 90 bp | CAAGTGAGAACACCTCAGTTCCACTTGGGAGGGAGAAGAAATCAACCAAGAGGGTGGATGATAGCACTGTaGTTCCCAGAGACATCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QVRTPQFHLGGRRNQPRGWMIAL*FPETSE Trigger: TTCAGATGTCTCTGGGAATCACAGTGCTATCATCCA...CCCTCTTGGTTGATTTCTTCTCCCTCCCAAGTGGAACTGAGGTGTTCTCACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175724.9 |
||
| CDS-3UTR TCA 90 bp | TCAGAAATCTGCCGGCCTCTACCTCCCAAGTGCTGGGATTTAAGGTGTGTGCCACCAGCATCCCAAAAGTaGTACATTTCCCTTCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: SEICRPLPPKCWDLRCVPPASQK*YISLHN Trigger: ATTATGAAGGGAAATGTATCACTTTTGGGATGCTGG...TGGCACACACCTTAAATCCCAGCACTTGGGAGGTAGAGGCCGGCAGATTTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175724.9 |
||
| CDS-3UTR GCA 90 bp | AACACCTCAGTTCCACTTGGGAGGGAGAAGAAATCAACCAAGAGGGAGAGTGAGGAGGACACACTTTTGTaGAAACTGAATCTGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NTSVPLGREKKSTKRESEEDTLL*KLNLEA Trigger: GGCTTCCAGATTCAGTTTGCACAAAAGTGTGTCCTC...CTCACTCTCCCTCTTGGTTGATTTCTTCTCCCTCCCAAGTGGAACTGAGGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR CCA 90 bp | ACACTATTACTGAGGCTATGGAGCACTCACAAAAAGAGACTTAGCATGGCTGCATCCCTTCCGAGTCCCTaGAGGACACACTTTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLLLRLWSTHKKRLSMAASLPSP*RTHFCA Trigger: TGCACAAAAGTGTGTCCTCCAGGGACTCGGAAGGGA...TGCAGCCATGCTAAGTCTCTTTTTGTGAGTGCTCCATAGCCTCAGTAATAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTGAGAACACCTCAGTTCCACTTGGGAGGGAGAAGAAATCAACCAAGAGGGAATCAAAGCAGCATATaGGCTGTCCCTGGAGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: QVRTPQFHLGGRRNQPRGNQSSI*AVPGEF Trigger: GAATTCTCCAGGGACAGCCCATATGCTGCTTTGATT...CCCTCTTGGTTGATTTCTTCTCCCTCCCAAGTGGAACTGAGGTGTTCTCACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR TCA 90 bp | CTATTACTGAGGCTATGGAGCACTCACAAAAAGAGACTTAGCATGGCTGCACTCCCCCTCACACATGGGTaGTTCTATTTCCTCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLRLWSTHKKRLSMAALPLTHG*FYFLIR Trigger: TCTGATGAGGAAATAGAATCACCCATGTGTGAGGGG...GAGTGCAGCCATGCTAAGTCTCTTTTTGTGAGTGCTCCATAGCCTCAGTAATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTGATCCATCCAATAGGTGACTGTGAGCATCCACTTATGTTTGCTAGGCCCGGTTTGTATTCCTCCTaGCCTGTTAGAAACACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PVIHPIGDCEHPLMFARPGLYSS*PVRNTE Trigger: TTCAGTGTTTCTAACAGGGCAGGAGGAATACAAACC...GGGCCTAGCAAACATAAGTGGATGCTCACAGTCACCTATTGGATGGATCACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTGAGAACACCTCAGTTCCACTTGGGAGGGAGAAGAAATCAACCAAGAGGGCATCAGTACATGGGATaGAATCAAAGCAGCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: QVRTPQFHLGGRRNQPRGHQYMG*NQSSIW Trigger: CCATATGCTGCTTTGATTGCATCCCATGTACTGATG...CCCTCTTGGTTGATTTCTTCTCCCTCCCAAGTGGAACTGAGGTGTTCTCACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTGATCCATCCAATAGGTGACTGTGAGCATCCACTTATGTTTGCTAGGCCCGCAAGGAATTCTACATaGTTTGGCACACACTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PVIHPIGDCEHPLMFARPARNST*FGTHLF Trigger: GAACAAGTGTGTGCCAAAGCATGTAGAATTCCTTGC...GGGCCTAGCAAACATAAGTGGATGCTCACAGTCACCTATTGGATGGATCACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175724.9 |
||
| CDS-3UTR TCA 90 bp | TCCTTCTATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACGAAGAGATCCAGACAATaGAAAAGACCAGCATCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SFYGCFVPNSKKGQSVHTKRSRQ*KRPASQ Trigger: TTGGGATGCTGGTCTTTTTCATTGTCTGGATCTCTT...CGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATAGAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175724.9 |
||
| CDS-3UTR TCA 90 bp | AAAACACAGCAGAGCCAGAAGAACATCAAACCCAAAAATGGAGCACAGAAACTCCCCCTCACACATGGGTaGTTCTATTTCCTCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTQQSQKNIKPKNGAQKLPLTHG*FYFLIR Trigger: TCTGATGAGGAAATAGAATCACCCATGTGTGAGGGG...GAGTTTCTGTGCTCCATTTTTGGGTTTGATGTTCTTCTGGCTCTGCTGTGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| CDS-3UTR TCA 90 bp | GGCCTCCTCATAAGCAAGGAATTCTACATGCTTTGGCACACACTTGTTCTTCTCTCCAACTGGTTTCTCTaGCACATATCCATCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: GLLISKEFYMLWHTLVLLSNWFL*HISIST Trigger: TGTACTGATGGATATGTGTCAGAGAAACCAGTTGGA...GAGAAGAACAAGTGTGTGCCAAAGCATGTAGAATTCCTTGCTTATGAGGAGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| CDS-3UTR GCA 90 bp | TACACACTGGAATACTACTCAGCTATTAAGAATGATGGCATCCTGAGTTTTGAAAAGGCAAAAGCCCAGTaGCAGAGTGACCTGACGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YTLEYYSAIKNDGILSFEKAKAQ*QSDLTG Trigger: ACCCGTCAGGTCACTCTGGCACTGGGCTTTTGCCTT...TTCAAAACTCAGGATGCCATCATTCTTAATAGCTGAGTAGTATTCCAGTGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175724.9 |
||
| CDS-3UTR CCA 90 bp | AGTCTTTCGAACATTCTAGGAGGTAAGCATCTCACATCCCTCCTCTATATCCTTACGATGGCCTCAGACTaGAACTTGTCACTGGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: SLSNILGGKHLTSLLYILTMASD*NLSLGI Trigger: AATACCCAGTGACAAGTTCCAGTCTGAGGCCATCGT...AAGGATATAGAGGAGGGATGTGAGATGCTTACCTCCTAGAATGTTCGAAAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CAA 72 bp | GTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACGTaGGTCTTTGTTCTTCTCGAGTTTCATGTGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPNSKKGQSVHT*VFVLLEFHVFC Trigger: GCAAAACACATGAAACTCGAGAAGAACAAAGACCAACGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CAA 72 bp | TCTACATGCTTTGGCACACACTTGTTCTTCTCTGCATaGGACCAGTCATTTTCACCACATGGATCACATAGC | + |
|
Preference number: 4 (lower is better) Translates to: STCFGTHLFFSA*DQSFSPHGSHS Trigger: GCTATGTGATCCATGTGGTGAAAATGACTGGTCCAATGCAGAGAAGAACAAGTGTGTGCCAAAGCATGTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTATATCCTTCTCCTACCTGTCTTCCTGTCCCTGTACCCCTAAATTATCTATTGCATAAAGCACAATaGCTTTGGCAGTGGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLYPSPTCLPVPVPLNYLLHKAQ*LWQWNS Trigger: AGAGTTCCACTGCCAAAGTCATTGTGCTTTATGCAA...TAGATAATTTAGGGGTACAGGGACAGGAAGACAGGTAGGAGAAGGATATAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR TCA 90 bp | GAGCTCCGGAAGGTACTGGTTAGTTCATATATTTGTTCCACCTATAGGGTTGAATTTCCACAGCCACATTaGATTTGCCTTTGGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELRKVLVSSYICSTYRVEFPQPH*ICLWCS Trigger: TGAGCACCAAAGGCAAATTCAATGTGGCTGTGGAAA...TTCAACCCTATAGGTGGAACAAATATATGAACTAACCAGTACCTTCCGGAGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175724.9 |
||
| CDS-3UTR GCA 90 bp | CTATTACTGAGGCTATGGAGCACTCACAAAAAGAGACTTAGCATGGCTGCACTCACACTTGTTCTTCTCTaGATTGGACCAGTCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLRLWSTHKKRLSMAALTLVLL*IGPVIF Trigger: GAAAATGACTGGTCCAATGCAGAGAAGAACAAGTGT...GAGTGCAGCCATGCTAAGTCTCTTTTTGTGAGTGCTCCATAGCCTCAGTAATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175724.9 |
||
| CDS-3UTR GCA 90 bp | CCATTAGGAGTTAACATCCATTACCTGTCTCCACTCCACAGGTTCACTGATTATTTCACCAATGGAGTGTaGCTGTGGATCACATACACA | + |
|
Preference number: 4 (lower is better) Translates to: PLGVNIHYLSPLHRFTDYFTNGV*LWITYT Trigger: TGTGTATGTGATCCACAGGCACACTCCATTGGTGAA...ATAATCAGTGAACCTGTGGAGTGGAGACAGGTAATGGATGTTAACTCCTAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175724.9 |
||
| 3UTR CAA 72 bp | CCAAACTTTGTCTCTGTAACTCCTTCTATGGGTGTTTaGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PNFVSVTPSMGV*FPILRRGKVST Trigger: TGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATAGAAGGAGTTACAGAGACAAAGTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR TCA 90 bp | GGCCTCCTCATAAGCAAGGAATTCTACATGCTTTGGCACACACTTGTTCTTCTCAAAATATCCATCGCATaGGCAAAAAGATACACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLLISKEFYMLWHTLVLLKISIA*AKRYTA Trigger: AGCTGTGTATCTTTTTGCTCATGCGATGGATATTTT...GAGAAGAACAAGTGTGTGCCAAAGCATGTAGAATTCCTTGCTTATGAGGAGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| CDS-3UTR TCA 90 bp | CTAAAAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTGAGGTTCAATGTTCTTaGACAGGCTTGGAGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKSVLSKNLSSSQFPSTAEVQCS*TGLEAP Trigger: TGGAGCCTCCAAGCCTGTTCAAGAACATTGAACCTC...AGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTTTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175724.9 |
||
| CDS-3UTR GCA 90 bp | GAGCTCCGGAAGGTACTGGTTAGTTCATATATTTGTTCCACCTATAGGGTTGAAGGTTTGTATTCCTCCTaGCCTGTTAGAAACACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ELRKVLVSSYICSTYRVEGLYSS*PVRNTE Trigger: TTCAGTGTTTCTAACAGGGCAGGAGGAATACAAACC...TTCAACCCTATAGGTGGAACAAATATATGAACTAACCAGTACCTTCCGGAGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTATATCCTTCTCCTACCTGTCTTCCTGTCCCTGTACCCCTAAATTATCTAGAATTCTACATGCTTTaGCACACACTTGTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLYPSPTCLPVPVPLNYLEFYML*HTLVLL Trigger: GAGAAGAACAAGTGTGTGCCAAAGCATGTAGAATTC...TAGATAATTTAGGGGTACAGGGACAGGAAGACAGGTAGGAGAAGGATATAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175724.9 |
||
| CDS-3UTR CCA 90 bp | CCATTAGGAGTTAACATCCATTACCTGTCTCCACTCCACAGGTTCACTGATTATAATGGAGTGTGCCTGTaGATCACATACACAACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PLGVNIHYLSPLHRFTDYNGVCL*ITYTTV Trigger: TACTGTTGTGTATGTGATCCACAGGCACACTCCATT...ATAATCAGTGAACCTGTGGAGTGGAGACAGGTAATGGATGTTAACTCCTAATGG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175724.9 |
||
| CDS-3UTR TCA 90 bp | CTAAAAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTGGATCACATAGCCTTTaGCCTGGTTTCTCTGACACA | + |
|
Preference number: 4 (lower is better) Translates to: LKSVLSKNLSSSQFPSTAGSHSL*PGFSDT Trigger: TGTGTCAGAGAAACCAGGTCAAAGGCTATGTGATCC...AGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175724.9 |
||
| CDS-3UTR GCA 90 bp | AGTCTTTCGAACATTCTAGGAGGTAAGCATCTCACATCCCTCCTCTATATCCTTAACACTTCTCGGTATTaGAAATCCAATAGTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SLSNILGGKHLTSLLYILNTSRY*KSNSST Trigger: GGTGGAACTATTGGATTTGCAATACCGAGAAGTGTT...AAGGATATAGAGGAGGGATGTGAGATGCTTACCTCCTAGAATGTTCGAAAGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR CCA 90 bp | AAACCCAAACAACCCAATCAAAGAATGAGGTATAGAAATAAACTGAGAAGTCACAAGCCACACAAAGGTTaGCCCTCTCCATTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KPKQPNQRMRYRNKLRSHKPHKG*PSPFLP Trigger: GGGAAGAAATGGAGAGGGCCAACCTTTGTGTGGCTT...GTGACTTCTCAGTTTATTTCTATACCTCATTCTTTGATTGGGTTGTTTGGGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR TCA 90 bp | GTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTCAGTCCTAAAATATCCATCGCATaGGCAAAAAGATACACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VFCLKIYPHLSSLPQLSPKISIA*AKRYTA Trigger: AGCTGTGTATCTTTTTGCTCATGCGATGGATATTTT...AGGACTGAGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR GCA 90 bp | ACACAGATCAACACAATGAGTTTACGAAAAATGGGGTGCATGGATATTAGCCGGTGTCACTGGGTATTGTaGGAAGAATGTATGGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: TQINTMSLRKMGCMDISRCHWVL*EECMEI Trigger: AATTTCCATACATTCTTCGCACAATACCCAGTGACA...CCGGCTAATATCCATGCACCCCATTTTTCGTAAACTCATTGTGTTGATCTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| CDS-3UTR CCA 90 bp | CTAAAAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTAATCAAAGCAGCATATaGGCTGTCCCTGGAGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LKSVLSKNLSSSQFPSTANQSSI*AVPGEF Trigger: GAATTCTCCAGGGACAGCCCATATGCTGCTTTGATT...AGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTTTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CAA 72 bp | CTCAGTCCTTTTCACCTTAGTCCCTCTCTCTTCTCTTaGTCCTCAGTACTTAAACATCTTTCAGAATATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSPFHLSPSLFS*SSVLKHLSEYV Trigger: CACATATTCTGAAAGATGTTTAAGTACTGAGGACAAAGAGAAGAGAGAGGGACTAAGGTGAAAAGGACTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR GCA 90 bp | CCACACGTTGGTCTTTGTTCTTCTCGAGTTTCATGTGTTTTGCAAATTTTATCTCATCAGTACATGGGATaGAATCAAAGCAGCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: PHVGLCSSRVSCVLQILSHQYMG*NQSSIW Trigger: CCATATGCTGCTTTGATTGCATCCCATGTACTGATG...AGATAAAATTTGCAAAACACATGAAACTCGAGAAGAACAAAGACCAACGTGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CAA 72 bp | TGTAAAATATCTTCCCGGGGTCCCATTTATCAATTCTaGATCTTAGAGTATGCACCATTGGCTTCTTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CKISSRGPIYQF*ILEYAPLASLR Trigger: CCTTAAAGAAGCCAATGGTGCATACTCTAAGATCAAGAATTGATAAATGGGACCCCGGGAAGATATTTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CAA 72 bp | ATTCTAAGAAGGGGCAAAGTGTCCACACGTTGGTCTTaGTTCTTCTCGAGTTTCATGTGTTTTGCAAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILRRGKVSTRWS*FFSSFMCFANF Trigger: AAAATTTGCAAAACACATGAAACTCGAGAAGAACAAAGACCAACGTGTGGACACTTTGCCCCTTCTTAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| 3UTR CAA 72 bp | TACTGGTTAGTTCATATATTTGTTCCACCTATAGGGTaGAAGATCCCTTTAGCTCCTTGGGTACTTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YWLVHIFVPPIG*KIPLAPWVLSL Trigger: TAGAGAAAGTACCCAAGGAGCTAAAGGGATCTTCAACCCTATAGGTGGAACAAATATATGAACTAACCAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR GCA 90 bp | CTAAAAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTATAATCATCATCAGATaGAATAGCACCTACCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LKSVLSKNLSSSQFPSTAIIIIR*NSTYPD Trigger: GTCTGGGTAGGTGCTATTGCATCTGATGATGATTAT...AGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTTTTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR GCA 90 bp | CTAAAAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTTGTCACTGGGTATTGTaGGAAGAATGTATGGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LKSVLSKNLSSSQFPSTACHWVL*EECMEI Trigger: AATTTCCATACATTCTTCGCACAATACCCAGTGACA...AGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTTTTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR GCA 90 bp | GACAATGTTCTTACTCTCAATGCCTTTTCTCCGAAAGCTAAACTTATACTTCTAAACACTTCTCGGTATTaGAAATCCAATAGTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: DNVLTLNAFSPKAKLILLNTSRY*KSNSST Trigger: GGTGGAACTATTGGATTTGCAATACCGAGAAGTGTT...TAGAAGTATAAGTTTAGCTTTCGGAGAAAAGGCATTGAGAGTAAGAACATTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS CCA 90 bp | CCATCAGTACATGGGATGCAATCAAAGCAGCATATGGGCTGTCCCTaGAGAATTCCCTTCCGAGTCCCTGGAGGACACACTTTTGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PSVHGMQSKQHMGCP*RIPFRVPGGHTFVQ Trigger: TTGCACAAAAGTGTGTCCTCCAGGGACTCGGAAGGGAATTCTCCAGGGACAGCCCATATGCTGCTTTGATTGCATCCCATGTACTGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS CCA 90 bp | CTGACACATATCCATCAGTACATGGGATGCAATCAAAGCAGCATATaGGCTGTCCCTGGAGAATTCCCTTCCGAGTCCCTGGAGGACACA | + |
|
Preference number: 5 (lower is better) Translates to: LTHIHQYMGCNQSSI*AVPGEFPSESLEDT Trigger: TGTGTCCTCCAGGGACTCGGAAGGGAATTCTCCAGGGACAGCCCATATGCTGCTTTGATTGCATCCCATGTACTGATGGATATGTGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR CAA 90 bp | CAAGTGAGAACACCTCAGTTCCACTTGGGAGGGAGAAGAAATCAACCAAGAGGGGCCTCAGACTGGAACTaGTCACTGGGTATTGTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: QVRTPQFHLGGRRNQPRGASDWN*SLGIVR Trigger: TCGCACAATACCCAGTGACAAGTTCCAGTCTGAGGC...CCCTCTTGGTTGATTTCTTCTCCCTCCCAAGTGGAACTGAGGTGTTCTCACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTGATCCATCCAATAGGTGACTGTGAGCATCCACTTATGTTTGCTAGGCCCTGCTTTGGCACACACTaGTTCTTCTCTGCATTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PVIHPIGDCEHPLMFARPCFGTH*FFSALD Trigger: GTCCAATGCAGAGAAGAACAAGTGTGTGCCAAAGCA...GGGCCTAGCAAACATAAGTGGATGCTCACAGTCACCTATTGGATGGATCACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175724.9 |
||
| CDS-3UTR CAA 90 bp | CACCAATGGAGTGTGCCTGTGGATCACATACACAACAGTAACTGCCAAGACCACCTGGAGGACACACTTTaGTGCAAACTGAATCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HQWSVPVDHIHNSNCQDHLEDTL*CKLNLE Trigger: TTCCAGATTCAGTTTGCACAAAAGTGTGTCCTCCAG...GTGGTCTTGGCAGTTACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| CDS GCA 90 bp | GTCCCTGGAGAATTCCCTTCCGAGTCCCTGGAGGACACACTTTTGTaGAAACTGAATCTGGAAGCCTTGAAGATTCAGTGTTCCAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: VPGEFPSESLEDTLL*KLNLEALKIQCSKI Trigger: TATTTTGGAACACTGAATCTTCAAGGCTTCCAGATTCAGTTTGCACAAAAGTGTGTCCTCCAGGGACTCGGAAGGGAATTCTCCAGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR CAA 90 bp | TGGGGGACTCTCTATAATGTACCAGAGACCTGGGAGGTGAGAGACTCTCAGGACTTCTCTTATGTCATCTaGTCTCAAAATATCCATCGC | + |
|
Preference number: 5 (lower is better) Translates to: WGTLYNVPETWEVRDSQDFSYVI*SQNIHR Trigger: GCGATGGATATTTTGAGACAAGATGACATAAGAGAA...GTCCTGAGAGTCTCTCACCTCCCAGGTCTCTGGTACATTATAGAGAGTCCCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS TCA 90 bp | TCTGCATTGGACCAGTCATTTTCACCACATGGATCACATAGCCTTTaGCCTGGTTTCTCTGACACATATCCATCAGTACATGGGATGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SALDQSFSPHGSHSL*PGFSDTYPSVHGMQ Trigger: TTGCATCCCATGTACTGATGGATATGTGTCAGAGAAACCAGGTCAAAGGCTATGTGATCCATGTGGTGAAAATGACTGGTCCAATGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 |
||
| CDS CCA 90 bp | CAAGGAATTCTACATGCTTTGGCACACACTTGTTCTTCTCTGCATTaGACCAGTCATTTTCACCACATGGATCACATAGCCTTTGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: QGILHALAHTCSSLH*TSHFHHMDHIAFDL Trigger: CAGGTCAAAGGCTATGTGATCCATGTGGTGAAAATGACTGGTCCAATGCAGAGAAGAACAAGTGTGTGCCAAAGCATGTAGAATTCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 |
||
| CDS-3UTR CAA 90 bp | TACACACTGGAATACTACTCAGCTATTAAGAATGATGGCATCCTGAGTTTTGAAGCCTCAGACTGGAACTaGTCACTGGGTATTGTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: YTLEYYSAIKNDGILSFEASDWN*SLGIVR Trigger: TCGCACAATACCCAGTGACAAGTTCCAGTCTGAGGC...TTCAAAACTCAGGATGCCATCATTCTTAATAGCTGAGTAGTATTCCAGTGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR CAA 90 bp | CCATTAGGAGTTAACATCCATTACCTGTCTCCACTCCACAGGTTCACTGATTATCTGGAGGACACACTTTaGTGCAAACTGAATCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PLGVNIHYLSPLHRFTDYLEDTL*CKLNLE Trigger: TTCCAGATTCAGTTTGCACAAAAGTGTGTCCTCCAG...ATAATCAGTGAACCTGTGGAGTGGAGACAGGTAATGGATGTTAACTCCTAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR CAA 90 bp | CTATTACTGAGGCTATGGAGCACTCACAAAAAGAGACTTAGCATGGCTGCACTCAAGATAATGAAGCACTaGGGAAGAAATAGACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLRLWSTHKKRLSMAALKIMKH*GRNRQP Trigger: AGGCTGTCTATTTCTTCCCAAGTGCTTCATTATCTT...GAGTGCAGCCATGCTAAGTCTCTTTTTGTGAGTGCTCCATAGCCTCAGTAATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175724.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTATATCCTTCTCCTACCTGTCTTCCTGTCCCTGTACCCCTAAATTATCTACATCAGAGTCACTTGTaGGCATGGTCCTATAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: PLYPSPTCLPVPVPLNYLHQSHL*AWSYNE Trigger: TTCATTATAGGACCATGCCAACAAGTGACTCTGATG...TAGATAATTTAGGGGTACAGGGACAGGAAGACAGGTAGGAGAAGGATATAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR CAA 90 bp | GTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTCAGTCCTCCTCATCAGAGTCACTaGTTGGCATGGTCCTATAAT | + |
|
Preference number: 5 (lower is better) Translates to: VFCLKIYPHLSSLPQLSPPHQSH*LAWSYN Trigger: ATTATAGGACCATGCCAACAAGTGACTCTGATGAGG...AGGACTGAGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR CAA 90 bp | AAAACACAGCAGAGCCAGAAGAACATCAAACCCAAAAATGGAGCACAGAAACTCACTTGTCACTGGGTATaGTGCGAAGAATGTATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: KTQQSQKNIKPKNGAQKLTCHWV*CEECME Trigger: TTCCATACATTCTTCGCACAATACCCAGTGACAAGT...GAGTTTCTGTGCTCCATTTTTGGGTTTGATGTTCTTCTGGCTCTGCTGTGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233824.2 |
||
| CDS-3UTR CAA 90 bp | CCATTAGGAGTTAACATCCATTACCTGTCTCCACTCCACAGGTTCACTGATTATTTGTTCTTCTCTGCATaGGACCAGTCATTTTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: PLGVNIHYLSPLHRFTDYLFFSA*DQSFSP Trigger: TGGTGAAAATGACTGGTCCAATGCAGAGAAGAACAA...ATAATCAGTGAACCTGTGGAGTGGAGACAGGTAATGGATGTTAACTCCTAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175724.9 |
||
| CDS-3UTR CAA 90 bp | AGTCTTTCGAACATTCTAGGAGGTAAGCATCTCACATCCCTCCTCTATATCCTTGGAATTCTACATGCTTaGGCACACACTTGTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLSNILGGKHLTSLLYILGILHA*AHTCSS Trigger: AGAAGAACAAGTGTGTGCCAAAGCATGTAGAATTCC...AAGGATATAGAGGAGGGATGTGAGATGCTTACCTCCTAGAATGTTCGAAAGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175724.9 |
||
| CDS-3UTR CAA 90 bp | CCATTAGGAGTTAACATCCATTACCTGTCTCCACTCCACAGGTTCACTGATTATCATCAGAGTCACTTGTaGGCATGGTCCTATAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: PLGVNIHYLSPLHRFTDYHQSHL*AWSYNE Trigger: TTCATTATAGGACCATGCCAACAAGTGACTCTGATG...ATAATCAGTGAACCTGTGGAGTGGAGACAGGTAATGGATGTTAACTCCTAATGG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR CAA 90 bp | AAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTCAGTATTTCCACAGCCACATaGAATTTGCCTTTGGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KVFCLKIYPHLSSLPQLSISTAT*NLPLVL Trigger: GAGCACCAAAGGCAAATTCAATGTGGCTGTGGAAAT...ACTGAGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175724.9 |
||
| CDS-3UTR CAA 90 bp | CCACACGTTGGTCTTTGTTCTTCTCGAGTTTCATGTGTTTTGCAAATTTTATCTCCTCATCAGAGTCACTaGTTGGCATGGTCCTATAAT | + |
|
Preference number: 5 (lower is better) Translates to: PHVGLCSSRVSCVLQILSPHQSH*LAWSYN Trigger: ATTATAGGACCATGCCAACAAGTGACTCTGATGAGG...AGATAAAATTTGCAAAACACATGAAACTCGAGAAGAACAAAGACCAACGTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS-3UTR CAA 90 bp | CTAAAAAGTGTTCTGTCTAAAAATTTATCCTCATCTCAGTTCCCTTCCACAGCTACTTGTCACTGGGTATaGTGCGAAGAATGTATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LKSVLSKNLSSSQFPSTATCHWV*CEECME Trigger: TTCCATACATTCTTCGCACAATACCCAGTGACAAGT...AGCTGTGGAAGGGAACTGAGATGAGGATAAATTTTTAGACAGAACACTTTTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS TCA 90 bp | TATTGTGCGAAGAATGTATGGAAATTGATAATCATTACTAAAAATTaGGGAGGAAGAAGCATATCCTACCTGAGGTACACGATGAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: YCAKNVWKLIIITKN*GGRSISYLRYTMNP Trigger: GGGATTCATCGTGTACCTCAGGTAGGATATGCTTCTTCCTCCTCAATTTTTAGTAATGATTATCAATTTCCATACATTCTTCGCACAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS CCA 72 bp | CATGGGATGCAATCAAAGCAGCATATGGGCTGTCCCTaGAGAATTCCCTTCCGAGTCCCTGGAGGACACACT | + |
|
Preference number: 6 (lower is better) Translates to: HGMQSKQHMGCP*RIPFRVPGGHT Trigger: AGTGTGTCCTCCAGGGACTCGGAAGGGAATTCTCCAGGGACAGCCCATATGCTGCTTTGATTGCATCCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS CCA 72 bp | ATCCATCAGTACATGGGATGCAATCAAAGCAGCATATaGGCTGTCCCTGGAGAATTCCCTTCCGAGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: IHQYMGCNQSSI*AVPGEFPSESL Trigger: CAGGGACTCGGAAGGGAATTCTCCAGGGACAGCCCATATGCTGCTTTGATTGCATCCCATGTACTGATGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS CAA 90 bp | GCTGTCCCTGGAGAATTCCCTTCCGAGTCCCTGGAGGACACACTTTaGTGCAAACTGAATCTGGAAGCCTTGAAGATTCAGTGTTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: AVPGEFPSESLEDTL*CKLNLEALKIQCSK Trigger: TTTGGAACACTGAATCTTCAAGGCTTCCAGATTCAGTTTGCACAAAAGTGTGTCCTCCAGGGACTCGGAAGGGAATTCTCCAGGGACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS CAA 72 bp | GGAGAATTCCCTTCCGAGTCCCTGGAGGACACACTTTaGTGCAAACTGAATCTGGAAGCCTTGAAGATTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GEFPSESLEDTL*CKLNLEALKIQ Trigger: CTGAATCTTCAAGGCTTCCAGATTCAGTTTGCACAAAAGTGTGTCCTCCAGGGACTCGGAAGGGAATTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS GCA 72 bp | CACTTCCAGCACAAAGGGGCTGAGGTCAATGTCAGTTaGATAAAGCACAATGACTTTGGCAGTGGAACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: HFQHKGAEVNVS*IKHNDFGSGTL Trigger: AAGAGTTCCACTGCCAAAGTCATTGTGCTTTATGCAACTGACATTGACCTCAGCCCCTTTGTGCTGGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS GCA 72 bp | GAATTCCCTTCCGAGTCCCTGGAGGACACACTTTTGTaGAAACTGAATCTGGAAGCCTTGAAGATTCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: EFPSESLEDTLL*KLNLEALKIQC Trigger: ACACTGAATCTTCAAGGCTTCCAGATTCAGTTTGCACAAAAGTGTGTCCTCCAGGGACTCGGAAGGGAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS GCA 72 bp | CTGGTTTCTCTGACACATATCCATCAGTACATGGGATaGAATCAAAGCAGCATATGGGCTGTCCCTGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LVSLTHIHQYMG*NQSSIWAVPGE Trigger: TTCTCCAGGGACAGCCCATATGCTGCTTTGATTGCATCCCATGTACTGATGGATATGTGTCAGAGAAACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
||
| CDS GCA 72 bp | CCAGTGCTGTTTCTCCAGTTAGGTTTGTATTCCTCCTaGCCTGTTAGAAACACTGAAGATGACTCCATTGCT | + |
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Preference number: 6 (lower is better) Translates to: PVLFLQLGLYSS*PVRNTEDDSIA Trigger: AGCAATGGAGTCATCTTCAGTGTTTCTAACAGGGCAGGAGGAATACAAACCTAACTGGAGAAACAGCACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| CDS CAA 90 bp | ATTGTAAGCCACACTGCTGTTGGGCCAGGTACAGTTAAAAGCAGTTaGCCAGAATTCAATGGTCAAGACATCATTTGGATCCTTGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: IVSHTAVGPGTVKSS*PEFNGQDIIWILAR Trigger: CCTAGCAAGGATCCAAATGATGTCTTGACCATTGAATTCTGGCAAACTGCTTTTAACTGTACCTGGCCCAACAGCAGTGTGGCTTACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| CDS GCA 72 bp | AGGTATTTTTCAGATCTTCCAGCTTCTCCTCTCCAGTaGAGAGCTGATCAGACATGTCATACAGTCTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: RYFSDLPASPLQ*RADQTCHTVCL Trigger: AAGACAGACTGTATGACATGTCTGATCAGCTCTGCACTGGAGAGGAGAAGCTGGAAGATCTGAAAAATACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| CDS CAA 72 bp | ACTAGAAATTTTCCAGTGCTGTTTCTCCAGTTAGGTTaGTATTCCTCCTGCCCTGTTAGAAACACTGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: TRNFPVLFLQLG*YSSCPVRNTED Trigger: ATCTTCAGTGTTTCTAACAGGGCAGGAGGAATACAAACCTAACTGGAGAAACAGCACTGGAAAATTTCTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| CDS CAA 72 bp | TTACGATGGCCTCAGACTGGAACTTGTCACTGGGTATaGTGCGAAGAATGTATGGAAATTGATAATCATTAC | + |
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Preference number: 6 (lower is better) Translates to: LRWPQTGTCHWV*CEECMEIDNHY Trigger: GTAATGATTATCAATTTCCATACATTCTTCGCACAATACCCAGTGACAAGTTCCAGTCTGAGGCCATCGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| CDS CAA 72 bp | TGTCTAATTAGATTTACGATGGCCTCAGACTGGAACTaGTCACTGGGTATTGTGCGAAGAATGTATGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: CLIRFTMASDWN*SLGIVRRMYGN Trigger: ATTTCCATACATTCTTCGCACAATACCCAGTGACAAGTTCCAGTCTGAGGCCATCGTAAATCTAATTAGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| CDS CAA 72 bp | ACTTTTGGAATGGTTTCAGAGAAAGCCACACAAAGGTaGGCCCTCTCCATTTCTTCCCTAAAGAATTTTACT | + |
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Preference number: 6 (lower is better) Translates to: TFGMVSEKATQR*ALSISSLKNFT Trigger: AGTAAAATTCTTTAGGGAAGAAATGGAGAGGGCCAACCTTTGTGTGGCTTTCTCTGAAACCATTCCAAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| CDS CAA 90 bp | ATAATTCCAACTAGAAATTTTCCAGTGCTGTTTCTCCAGTTAGGTTaGTATTCCTCCTGCCCTGTTAGAAACACTGAAGATGACTCCATT | + |
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Preference number: 6 (lower is better) Translates to: IIPTRNFPVLFLQLG*YSSCPVRNTEDDSI Trigger: AATGGAGTCATCTTCAGTGTTTCTAACAGGGCAGGAGGAATACAAACCTAACTGGAGAAACAGCACTGGAAAATTTCTAGTTGGAATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| CDS CCA 72 bp | TTAGATTTACGATGGCCTCAGACTGGAACTTGTCACTaGGTATTGTGCGAAGAATGTATGGAAATTGATAAT | + |
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Preference number: 6 (lower is better) Translates to: LDLRWPQTGTCH*VLCEECMEIDN Trigger: ATTATCAATTTCCATACATTCTTCGCACAATACCCAGTGACAAGTTCCAGTCTGAGGCCATCGTAAATCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| CDS CAA 72 bp | CAACAGCTATTTTCATTTTCTCATTGGAGTAGACTTTaGGAATGGTTTCAGAGAAAGCCACACAAAGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: QQLFSFSHWSRL*EWFQRKPHKGW Trigger: CCAACCTTTGTGTGGCTTTCTCTGAAACCATTCCAAAAGTCTACTCCAATGAGAAAATGAAAATAGCTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| CDS TCA 72 bp | TCTCTTATGTCATCTTGTCTCAAAATATCCATCGCATaGGCAAAAAGATACACAGCTTGTCTGACATTGTTT | + |
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Preference number: 6 (lower is better) Translates to: SLMSSCLKISIA*AKRYTACLTLF Trigger: AAACAATGTCAGACAAGCTGTGTATCTTTTTGCTCATGCGATGGATATTTTGAGACAAGATGACATAAGAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
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| CDS CCA 72 bp | TCTCCATTACTACCAAGTTCTATTTTCCTTCCATCATaGGTAACGAATTTTATTTCTTTCATGTACGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: SPLLPSSIFLPS*VTNFISFMYGH Trigger: ATGGCCGTACATGAAAGAAATAAAATTCGTTACCCATGATGGAAGGAAAATAGAACTTGGTAGTAATGGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170280.3 ENSMUST00000175724.9 ENSMUST00000233824.2 |
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