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Pregenerated sensors for VMN2R37 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000066828

Ensembl transcript IDs: ENSMUST00000072787.5

Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GTCTTCCTAGATCTCATTTTTCTACACAAAGTGGTGGATTCAACTGCCTTATCAGAGAGTTTAGTTCTCTaGGAGAAAATGAAGAAAGTG +
Preference number: 2 (lower is better)
Translates to: VFLDLIFLHKVVDSTALSESLVL*EKMKKV
Trigger: CACTTTCTTCATTTTCTCTCAGAGAACTAAACTCTC...TGATAAGGCAGTTGAATCCACCACTTTGTGTAGAAAAATGAGATCTAGGAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS-3UTR TCA 90 bp ATGTGTAACCCTGTCTTCCTAGATCTCATTTTTCTACACAAAGTGGTGGATTCAAGACAGGGAGGAAGGTaGCCCAGACACTACAGAACA +
Preference number: 4 (lower is better)
Translates to: MCNPVFLDLIFLHKVVDSRQGGR*PRHYRT
Trigger: TGTTCTGTAGTGTCTGGGTCACCTTCCTCCCTGTCT...TGAATCCACCACTTTGTGTAGAAAAATGAGATCTAGGAAGACAGGGTTACACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS-3UTR TCA 90 bp ATGTGTAACCCTGTCTTCCTAGATCTCATTTTTCTACACAAAGTGGTGGATTCAGAACTGCTGCCAGGATaGAAGCACAAGATAATCCCA +
Preference number: 4 (lower is better)
Translates to: MCNPVFLDLIFLHKVVDSELLPG*KHKIIP
Trigger: TGGGATTATCTTGTGCTTTCATCCTGGCAGCAGTTC...TGAATCCACCACTTTGTGTAGAAAAATGAGATCTAGGAAGACAGGGTTACACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS-3UTR TCA 90 bp AGACACATGCACTATAACCCAATATTTGGTGGGTATGTACCAACTTTACATTTGAAGCCAGAACCACAGTaGCTGTTTTGGCCAGAACTG +
Preference number: 4 (lower is better)
Translates to: RHMHYNPIFGGYVPTLHLKPEPQ*LFWPEL
Trigger: CAGTTCTGGCCAAAACAGTCACTGTGGTTCTGGCTT...CAAATGTAAAGTTGGTACATACCCACCAAATATTGGGTTATAGTGCATGTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS-3UTR TCA 90 bp ACAGCAGAAAAGGAACATTTCCTCCTTAGACTATTGGCCAGTAGATTGAAGAACGTAGTTGGGTGTTCCTaGTACCAGGAAGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: TAEKEHFLLRLLASRLKNVVGCS*YQEVSQ
Trigger: TTGAGAAACTTCCTGGTATCAGGAACACCCAACTAC...GTTCTTCAATCTACTGGCCAATAGTCTAAGGAGGAAATGTTCCTTTTCTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS-3UTR TCA 90 bp CTAGATCTCATTTTTCTACACAAAGTGGTGGATTCAACTGCCTTATCAACATTTGGTCATCATCTGGAATaGCAAGGCCAATCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LDLIFLHKVVDSTALSTFGHHLE*QGQSSS
Trigger: GGAACTGGATTGGCCTTGTCATTCCAGATGATGACC...AAATGTTGATAAGGCAGTTGAATCCACCACTTTGTGTAGAAAAATGAGATCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS-3UTR TCA 90 bp CTAGATCTCATTTTTCTACACAAAGTGGTGGATTCAACTGCCTTATCAACATTTCCATTGTCTATTGCCTaGTTATCAGCCTGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: LDLIFLHKVVDSTALSTFPLSIA*LSACCR
Trigger: TCTGCAACAGGCTGATAATCAGGCAATAGACAATGG...AAATGTTGATAAGGCAGTTGAATCCACCACTTTGTGTAGAAAAATGAGATCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS-3UTR TCA 90 bp CTAGATCTCATTTTTCTACACAAAGTGGTGGATTCAACTGCCTTATCAACATTTCTGTCTACATATAAGTaGGAGTGTCGACCATGTGGT +
Preference number: 4 (lower is better)
Translates to: LDLIFLHKVVDSTALSTFLSTYK*ECRPCG
Trigger: ACCACATGGTCGACACTCTCACTTATATGTAGACAG...AAATGTTGATAAGGCAGTTGAATCCACCACTTTGTGTAGAAAAATGAGATCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS-3UTR TCA 90 bp GTCTTCCTAGATCTCATTTTTCTACACAAAGTGGTGGATTCAACTGCCTTATCAACAATAGGAGTGTCATaGTGCTTCACAAAGACACAA +
Preference number: 4 (lower is better)
Translates to: VFLDLIFLHKVVDSTALSTIGVS*CFTKTQ
Trigger: TTGTGTCTTTGTGAAGCATCATGACACTCCTATTGT...TGATAAGGCAGTTGAATCCACCACTTTGTGTAGAAAAATGAGATCTAGGAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS-3UTR CCA 90 bp GTCTTCCTAGATCTCATTTTTCTACACAAAGTGGTGGATTCAACTGCCTTATCAGAAATCACACCATGGTaGGGTAGAAAAGTAAGTGAT +
Preference number: 4 (lower is better)
Translates to: VFLDLIFLHKVVDSTALSEITPW*GRKVSD
Trigger: ATCACTTACTTTTCTACCCCACCATGGTGTGATTTC...TGATAAGGCAGTTGAATCCACCACTTTGTGTAGAAAAATGAGATCTAGGAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS-3UTR TCA 90 bp ATGTGTAACCCTGTCTTCCTAGATCTCATTTTTCTACACAAAGTGGTGGATTCAGAGAGATTCACAAAGTaGACAATGTCATATTCATCG +
Preference number: 4 (lower is better)
Translates to: MCNPVFLDLIFLHKVVDSERFTK*TMSYSS
Trigger: CGATGAATATGACATTGTTCACTTTGTGAATCTCTC...TGAATCCACCACTTTGTGTAGAAAAATGAGATCTAGGAAGACAGGGTTACACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS-3UTR TCA 90 bp CTAGATCTCATTTTTCTACACAAAGTGGTGGATTCAACTGCCTTATCAACATTTGATCAGGATTTCTGTTaGTTTCATCCATTGCAAACA +
Preference number: 4 (lower is better)
Translates to: LDLIFLHKVVDSTALSTFDQDFC*FHPLQT
Trigger: TGTTTGCAATGGATGAAATCAACAGAAATCCTGATC...AAATGTTGATAAGGCAGTTGAATCCACCACTTTGTGTAGAAAAATGAGATCTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS TCA 90 bp TGCAAACAAAACAGCAGGCTGCCATTCCCTCCTTCCATAATCTTCTaGATCCAGGACTACAATCAGCACTGCACACAGAGGATGGCATCT +
Preference number: 5 (lower is better)
Translates to: CKQNSRLPFPPSIIF*IQDYNQHCTQRMAS
Trigger: AGATGCCATCCTCTGTGTGCAGTGCTGATTGTAGTCCTGGATTCAGAAGATTATGGAAGGAGGGAATGGCAGCCTGCTGTTTTGTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS-3UTR CAA 90 bp GTCTTCCTAGATCTCATTTTTCTACACAAAGTGGTGGATTCAACTGCCTTATCATGCTTCATAAACACTTaGTCCCCAGGAGGATTAGTG +
Preference number: 5 (lower is better)
Translates to: VFLDLIFLHKVVDSTALSCFINT*SPGGLV
Trigger: CACTAATCCTCCTGGGGACAAAGTGTTTATGAAGCA...TGATAAGGCAGTTGAATCCACCACTTTGTGTAGAAAAATGAGATCTAGGAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS GCA 90 bp AGAACTGTGGAAACAGCCATAGTGAATACAATTCCAAATGTGATTTaGTGTAAGACACAGATGGCTCTGTTTGGAAGGCCAATGAAGAAA +
Preference number: 5 (lower is better)
Translates to: RTVETAIVNTIPNVI*CKTQMALFGRPMKK
Trigger: TTTCTTCATTGGCCTTCCAAACAGAGCCATCTGTGTCTTACAGCAAATCACATTTGGAATTGTATTCACTATGGCTGTTTCCACAGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS-3UTR CAA 90 bp ATGTGTAACCCTGTCTTCCTAGATCTCATTTTTCTACACAAAGTGGTGGATTCAAAGAAATTGGTTTCCTaGGTCATCATCTGGAATGAC +
Preference number: 5 (lower is better)
Translates to: MCNPVFLDLIFLHKVVDSKKLVS*VIIWND
Trigger: GTCATTCCAGATGATGACCAAGGAAACCAATTTCTT...TGAATCCACCACTTTGTGTAGAAAAATGAGATCTAGGAAGACAGGGTTACACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS CAA 90 bp CCTGATACCAGGAAGTTTCTCAATCTTCTTCCTGGGTCTGTGACTTaGAAAGCCAGAACCACAGTGACTGTTTTGGCCAGAACTGTGGAA +
Preference number: 6 (lower is better)
Translates to: PDTRKFLNLLPGSVT*KARTTVTVLARTVE
Trigger: TTCCACAGTTCTGGCCAAAACAGTCACTGTGGTTCTGGCTTTCAAAGTCACAGACCCAGGAAGAAGATTGAGAAACTTCCTGGTATCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS GCA 72 bp CAAGCAGTGAGAACTGGCTCCTTTTCCATTGTCTATTaGCTGATTATCAGCCTGTTGCAGATTCATCTCATG +
Preference number: 6 (lower is better)
Translates to: QAVRTGSFSIVY*LIISLLQIHLM
Trigger: CATGAGATGAATCTGCAACAGGCTGATAATCAGGCAATAGACAATGGAAAAGGAGCCAGTTCTCACTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS CCA 72 bp CCTGTTGCAGATTCATCTCATGGAGGGCATGGGCTATaGCATGCACAGCATTGTATATGTTATGACTATTCT +
Preference number: 6 (lower is better)
Translates to: PVADSSHGGHGL*HAQHCICYDYS
Trigger: AGAATAGTCATAACATATACAATGCTGTGCATGCCATAGCCCATGCCCTCCATGAGATGAATCTGCAACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS GCA 72 bp GAAACAGCCATAGTGAATACAATTCCAAATGTGATTTaGTGTAAGACACAGATGGCTCTGTTTGGAAGGCCA +
Preference number: 6 (lower is better)
Translates to: ETAIVNTIPNVI*CKTQMALFGRP
Trigger: TGGCCTTCCAAACAGAGCCATCTGTGTCTTACAGCAAATCACATTTGGAATTGTATTCACTATGGCTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS CCA 72 bp CTCTGTTTCTTCAACTCTAAAAGAAATTGGTTTCCTTaGTCATCATCTGGAATGACAAGGCCAATCCAGTTC +
Preference number: 6 (lower is better)
Translates to: LCFFNSKRNWFP*SSSGMTRPIQF
Trigger: GAACTGGATTGGCCTTGTCATTCCAGATGATGACCAAGGAAACCAATTTCTTTTAGAGTTGAAGAAACAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS CCA 72 bp TTCTTAGAAAGGAGTTTACCTTCAAGCAGTGAGAACTaGCTCCTTTTCCATTGTCTATTGCCTGATTATCAG +
Preference number: 6 (lower is better)
Translates to: FLERSLPSSSEN*LLFHCLLPDYQ
Trigger: CTGATAATCAGGCAATAGACAATGGAAAAGGAGCCAGTTCTCACTGCTTGAAGGTAAACTCCTTTCTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS CAA 72 bp GTGAACAATGTCATATTCATCGTGCATTATTACTCTTaGCTTCATAAACACTTTGTCCCCAGGAGGATTAGT +
Preference number: 6 (lower is better)
Translates to: VNNVIFIVHYYS*LHKHFVPRRIS
Trigger: ACTAATCCTCCTGGGGACAAAGTGTTTATGAAGCAAAGAGTAATAATGCACGATGAATATGACATTGTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS CAA 90 bp ATTTCATCCAAATTTATTCTCCAAAAGCACCTGGGATCAATGAAATaGGCCATGAGAAGTGTAATATTAAGGAGGAAGAAGACTTCCATG +
Preference number: 6 (lower is better)
Translates to: ISSKFILQKHLGSMK*AMRSVILRRKKTSM
Trigger: CATGGAAGTCTTCTTCCTCCTTAATATTACACTTCTCATGGCCAATTTCATTGATCCCAGGTGCTTTTGGAGAATAAATTTGGATGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5
CDS CAA 72 bp TGTTCCATTAGCCAATCAAATGAGGCATTAGATGAATaGTTCTTCAGTATTTTACAGGTAGATGCTGAGTCT +
Preference number: 6 (lower is better)
Translates to: CSISQSNEALDE*FFSILQVDAES
Trigger: AGACTCAGCATCTACCTGTAAAATACTGAAGAACAATTCATCTAATGCCTCATTTGATTGGCTAATGGAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072787.5