RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN2R35 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096399

Ensembl transcript IDs: ENSMUST00000169683.2

Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GTCAGGCAGATTCTTGGCCAAGAAAGCCACAGTGAAACTTCCAAGTaGCAGGCAGGCCAAGTATCCAAGAAGACAGTAGAATGCAGTAAC +
Preference number: 5 (lower is better)
Translates to: VRQILGQESHSETSK*QAGQVSKKTVECSN
Trigger: GTTACTGCATTCTACTGTCTTCTTGGATACTTGGCCTGCCTGGCACTTGGAAGTTTCACTGTGGCTTTCTTGGCCAAGAATCTGCCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS TCA 90 bp TGCCAGGCAGGCCAAGTATCCAAGAAGACAGTAGAATGCAGTAACTaGGCCCTTGTTGCACACAATGATGATATGGCCATTCTGAGAGTG +
Preference number: 5 (lower is better)
Translates to: CQAGQVSKKTVECSN*ALVAHNDDMAILRV
Trigger: CACTCTCAGAATGGCCATATCATCATTGTGTGCAACAAGGGCTCAGTTACTGCATTCTACTGTCTTCTTGGATACTTGGCCTGCCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS GCA 90 bp GTTTACCTTCAAGCAGTGAGAACTGGCTCCTTTCCCATTGTCTATTaGCTGGTTATCAACCTGCTGCAAATTCATCTCATGGAGTGCATG +
Preference number: 5 (lower is better)
Translates to: VYLQAVRTGSFPIVY*LVINLLQIHLMECM
Trigger: CATGCACTCCATGAGATGAATTTGCAGCAGGTTGATAACCAGGCAATAGACAATGGGAAAGGAGCCAGTTCTCACTGCTTGAAGGTAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS TCA 90 bp GCAGTAACTGAGCCCTTGTTGCACACAATGATGATATGGCCATTCTaGGAGTGTTCATCAATATCAACAAAGGGAGGAGAAACTGCTAGC +
Preference number: 5 (lower is better)
Translates to: AVTEPLLHTMMIWPF*ECSSISTKGGETAS
Trigger: GCTAGCAGTTTCTCCTCCCTTTGTTGATATTGATGAACACTCTCAGAATGGCCATATCATCATTGTGTGCAACAAGGGCTCAGTTACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS CCA 90 bp AGTGGATCTTTCTTAGAAAGGAGTTTACCTTCAAGCAGTGAGAACTaGCTCCTTTCCCATTGTCTATTGCCTGGTTATCAACCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: SGSFLERSLPSSSEN*LLSHCLLPGYQPAA
Trigger: TGCAGCAGGTTGATAACCAGGCAATAGACAATGGGAAAGGAGCCAGTTCTCACTGCTTGAAGGTAAACTCCTTTCTAAGAAAGATCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS TCA 90 bp TCATGGAGTGCATGGGCTACGGCATACACAGCATTGTATATGTTATaGCTACTCTCACTAAAGGCCATGTCAAACTTCTGTTCCATTAGC +
Preference number: 5 (lower is better)
Translates to: SWSAWATAYTALYML*LLSLKAMSNFCSIS
Trigger: GCTAATGGAACAGAAGTTTGACATGGCCTTTAGTGAGAGTAGTCATAACATATACAATGCTGTGTATGCCGTAGCCCATGCACTCCATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS TCA 90 bp TTAGTAAAGTGGATCTTTCTTAGAAAGGAGTTTACCTTCAAGCAGTaGGAACTGGCTCCTTTCCCATTGTCTATTGCCTGGTTATCAACC +
Preference number: 5 (lower is better)
Translates to: LVKWIFLRKEFTFKQ*ELAPFPLSIAWLST
Trigger: GGTTGATAACCAGGCAATAGACAATGGGAAAGGAGCCAGTTCTCACTGCTTGAAGGTAAACTCCTTTCTAAGAAAGATCCACTTTACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS TCA 90 bp TTCTGTTCTGTGCTGGCATATTGGTATTCTGGACAATTCACACAATaGTCCATATTTGTCTCATTAGAAATTTCATTTTCAGGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: FCSVLAYWYSGQFTQ*SIFVSLEISFSGQG
Trigger: CCCCTGCCCTGAAAATGAAATTTCTAATGAGACAAATATGGATCATTGTGTGAATTGTCCAGAATACCAATATGCCAGCACAGAACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS GCA 72 bp ATTTTCAGGGCAGGGGCTGCAAACAGAACAGCAGGCTaGCATTCCCTCCTTCCACATTCTTCTGAATCCAGG +
Preference number: 6 (lower is better)
Translates to: IFRAGAANRTAG*HSLLPHSSESR
Trigger: CCTGGATTCAGAAGAATGTGGAAGGAGGGAATGGCAGCCTGCTGTTCTGTTTGCAGCCCCTGCCCTGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS CCA 72 bp GAATCCAGGACTACATTCTGCACTGCACACAGAGGATaGCATCTTTTTACTTCCTGTGGCCACCTCAAGCAT +
Preference number: 6 (lower is better)
Translates to: ESRTTFCTAHRG*HLFTSCGHLKH
Trigger: ATGCTTGAGGTGGCCACAGGAAGTAAAAAGATGCCATCCTCTGTGTGCAGTGCAGAATGTAGTCCTGGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS CAA 90 bp CCTGATACAAGGAAGTGTCTCAATCTTCTCCCTGGGTCTGTGATTTaGAAGGCGAGAACCACAGTGACTGTTTTAGCCAGAACTGTGGAA +
Preference number: 6 (lower is better)
Translates to: PDTRKCLNLLPGSVI*KARTTVTVLARTVE
Trigger: TTCCACAGTTCTGGCTAAAACAGTCACTGTGGTTCTCGCCTTCAAAATCACAGACCCAGGGAGAAGATTGAGACACTTCCTTGTATCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS GCA 72 bp ATTCTTGGCCAAGAAAGCCACAGTGAAACTTCCAAGTaGCAGGCAGGCCAAGTATCCAAGAAGACAGTAGAA +
Preference number: 6 (lower is better)
Translates to: ILGQESHSETSK*QAGQVSKKTVE
Trigger: TTCTACTGTCTTCTTGGATACTTGGCCTGCCTGGCACTTGGAAGTTTCACTGTGGCTTTCTTGGCCAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS CAA 72 bp AGGAAGTGTCTCAATCTTCTCCCTGGGTCTGTGATTTaGAAGGCGAGAACCACAGTGACTGTTTTAGCCAGA +
Preference number: 6 (lower is better)
Translates to: RKCLNLLPGSVI*KARTTVTVLAR
Trigger: TCTGGCTAAAACAGTCACTGTGGTTCTCGCCTTCAAAATCACAGACCCAGGGAGAAGATTGAGACACTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS GCA 72 bp CAAGCAGTGAGAACTGGCTCCTTTCCCATTGTCTATTaGCTGGTTATCAACCTGCTGCAAATTCATCTCATG +
Preference number: 6 (lower is better)
Translates to: QAVRTGSFPIVY*LVINLLQIHLM
Trigger: CATGAGATGAATTTGCAGCAGGTTGATAACCAGGCAATAGACAATGGGAAAGGAGCCAGTTCTCACTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS GCA 72 bp CTCCTTCCACATTCTTCTGAATCCAGGACTACATTCTaGACTGCACACAGAGGATGGCATCTTTTTACTTCC +
Preference number: 6 (lower is better)
Translates to: LLPHSSESRTTF*TAHRGWHLFTS
Trigger: GGAAGTAAAAAGATGCCATCCTCTGTGTGCAGTGCAGAATGTAGTCCTGGATTCAGAAGAATGTGGAAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS CAA 90 bp AGTTTACCTTCAAGCAGTGAGAACTGGCTCCTTTCCCATTGTCTATaGCCTGGTTATCAACCTGCTGCAAATTCATCTCATGGAGTGCAT +
Preference number: 6 (lower is better)
Translates to: SLPSSSENWLLSHCL*PGYQPAANSSHGVH
Trigger: ATGCACTCCATGAGATGAATTTGCAGCAGGTTGATAACCAGGCAATAGACAATGGGAAAGGAGCCAGTTCTCACTGCTTGAAGGTAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS TCA 72 bp TGGATCTTTCTTAGAAAGGAGTTTACCTTCAAGCAGTaGGAACTGGCTCCTTTCCCATTGTCTATTGCCTGG +
Preference number: 6 (lower is better)
Translates to: WIFLRKEFTFKQ*ELAPFPLSIAW
Trigger: CCAGGCAATAGACAATGGGAAAGGAGCCAGTTCTCACTGCTTGAAGGTAAACTCCTTTCTAAGAAAGATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS TCA 72 bp GGCCAAGTATCCAAGAAGACAGTAGAATGCAGTAACTaGGCCCTTGTTGCACACAATGATGATATGGCCATT +
Preference number: 6 (lower is better)
Translates to: GQVSKKTVECSN*ALVAHNDDMAI
Trigger: AATGGCCATATCATCATTGTGTGCAACAAGGGCTCAGTTACTGCATTCTACTGTCTTCTTGGATACTTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS GCA 72 bp CTGGTTATCAACCTGCTGCAAATTCATCTCATGGAGTaGATGGGCTACGGCATACACAGCATTGTATATGTT +
Preference number: 6 (lower is better)
Translates to: LVINLLQIHLME*MGYGIHSIVYV
Trigger: AACATATACAATGCTGTGTATGCCGTAGCCCATGCACTCCATGAGATGAATTTGCAGCAGGTTGATAACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS CCA 72 bp CACTGCACACAGAGGATGGCATCTTTTTACTTCCTGTaGCCACCTCAAGCATGTCTACATATAAGTGAAAGT +
Preference number: 6 (lower is better)
Translates to: HCTQRMASFYFL*PPQACLHISES
Trigger: ACTTTCACTTATATGTAGACATGCTTGAGGTGGCCACAGGAAGTAAAAAGATGCCATCCTCTGTGTGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS CAA 72 bp TCAAGCAGTGAGAACTGGCTCCTTTCCCATTGTCTATaGCCTGGTTATCAACCTGCTGCAAATTCATCTCAT +
Preference number: 6 (lower is better)
Translates to: SSSENWLLSHCL*PGYQPAANSSH
Trigger: ATGAGATGAATTTGCAGCAGGTTGATAACCAGGCAATAGACAATGGGAAAGGAGCCAGTTCTCACTGCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS TCA 72 bp GCATGGGCTACGGCATACACAGCATTGTATATGTTATaGCTACTCTCACTAAAGGCCATGTCAAACTTCTGT +
Preference number: 6 (lower is better)
Translates to: AWATAYTALYML*LLSLKAMSNFC
Trigger: ACAGAAGTTTGACATGGCCTTTAGTGAGAGTAGTCATAACATATACAATGCTGTGTATGCCGTAGCCCATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS TCA 72 bp GAGCCCTTGTTGCACACAATGATGATATGGCCATTCTaGGAGTGTTCATCAATATCAACAAAGGGAGGAGAA +
Preference number: 6 (lower is better)
Translates to: EPLLHTMMIWPF*ECSSISTKGGE
Trigger: TTCTCCTCCCTTTGTTGATATTGATGAACACTCTCAGAATGGCCATATCATCATTGTGTGCAACAAGGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS CCA 72 bp TCCAGGTACTTCCAGAAACTTAAAGATACCTCCCAATaGGTTCCTGTAAGCAGAAAGGAACACATAGTCTCT +
Preference number: 6 (lower is better)
Translates to: SRYFQKLKDTSQ*VPVSRKEHIVS
Trigger: AGAGACTATGTGTTCCTTTCTGCTTACAGGAACCCATTGGGAGGTATCTTTAAGTTTCTGGAAGTACCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS CAA 72 bp TGTGTCCTTTGGGGCCATCTGATAGAGATAGGGATATaGTTCATCATCACTGAAGATAGAATGGAAAGGTCC +
Preference number: 6 (lower is better)
Translates to: CVLWGHLIEIGI*FIITEDRMERS
Trigger: GGACCTTTCCATTCTATCTTCAGTGATGATGAACAATATCCCTATCTCTATCAGATGGCCCCAAAGGACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS GCA 72 bp ATTCTGTTATTGGCCTTCACAATAGGAGTGTCATGGTaGTTCACAAAGACACAAAGTACCACAGCTGTGAAT +
Preference number: 6 (lower is better)
Translates to: ILLLAFTIGVSW*FTKTQSTTAVN
Trigger: ATTCACAGCTGTGGTACTTTGTGTCTTTGTGAAGCACCATGACACTCCTATTGTGAAGGCCAATAACAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS CCA 72 bp TTCTTAGAAAGGAGTTTACCTTCAAGCAGTGAGAACTaGCTCCTTTCCCATTGTCTATTGCCTGGTTATCAA +
Preference number: 6 (lower is better)
Translates to: FLERSLPSSSEN*LLSHCLLPGYQ
Trigger: TTGATAACCAGGCAATAGACAATGGGAAAGGAGCCAGTTCTCACTGCTTGAAGGTAAACTCCTTTCTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS CAA 90 bp AAGGCCATGTCAAACTTCTGTTCCATTAGCCAATCAAATGAGGCATaGGATGATTTGCTCTTCAGTATTTTACACTTAGATGCTGAGGAT +
Preference number: 6 (lower is better)
Translates to: KAMSNFCSISQSNEA*DDLLFSILHLDAED
Trigger: ATCCTCAGCATCTAAGTGTAAAATACTGAAGAGCAAATCATCCAATGCCTCATTTGATTGGCTAATGGAACAGAAGTTTGACATGGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS CCA 72 bp TTCATAATCACTTTGTCCCCAAGAGGATTAGTAAAGTaGATCTTTCTTAGAAAGGAGTTTACCTTCAAGCAG +
Preference number: 6 (lower is better)
Translates to: FIITLSPRGLVK*IFLRKEFTFKQ
Trigger: CTGCTTGAAGGTAAACTCCTTTCTAAGAAAGATCCACTTTACTAATCCTCTTGGGGACAAAGTGATTATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS CAA 90 bp GGTGACAACTTTTTGAATACATTTGTTCTGTTCTGTGCTGGCATATaGGTATTCTGGACAATTCACACAATGATCCATATTTGTCTCATT +
Preference number: 6 (lower is better)
Translates to: GDNFLNTFVLFCAGI*VFWTIHTMIHICLI
Trigger: AATGAGACAAATATGGATCATTGTGTGAATTGTCCAGAATACCAATATGCCAGCACAGAACAGAACAAATGTATTCAAAAAGTTGTCACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS CCA 72 bp ACATTTGTTCTGTTCTGTGCTGGCATATTGGTATTCTaGACAATTCACACAATGATCCATATTTGTCTCATT +
Preference number: 6 (lower is better)
Translates to: TFVLFCAGILVF*TIHTMIHICLI
Trigger: AATGAGACAAATATGGATCATTGTGTGAATTGTCCAGAATACCAATATGCCAGCACAGAACAGAACAAATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS CAA 72 bp AAGTATTTCCACTCTGGCATTACTAGATATAAATCTTaGCTTCTGAGATGGAACCAAGTCTGCACAAAATTT +
Preference number: 6 (lower is better)
Translates to: KYFHSGITRYKS*LLRWNQVCTKF
Trigger: AAATTTTGTGCAGACTTGGTTCCATCTCAGAAGCAAAGATTTATATCTAGTAATGCCAGAGTGGAAATACTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2
CDS CAA 72 bp TCAAACTTCTGTTCCATTAGCCAATCAAATGAGGCATaGGATGATTTGCTCTTCAGTATTTTACACTTAGAT +
Preference number: 6 (lower is better)
Translates to: SNFCSISQSNEA*DDLLFSILHLD
Trigger: ATCTAAGTGTAAAATACTGAAGAGCAAATCATCCAATGCCTCATTTGATTGGCTAATGGAACAGAAGTTTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169683.2