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Pregenerated sensors for VMN2R33 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096691

Ensembl transcript IDs: ENSMUST00000165921.2

Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GTCAGGCAGATTCTTGGCCAAGAAAGCCAAACTGAAGCTTCCCAGTaGCAGGCAGGCCAAGTATCCAAGGACACAGTAGAATGCAGTAAC +
Preference number: 5 (lower is better)
Translates to: VRQILGQESQTEASQ*QAGQVSKDTVECSN
Trigger: GTTACTGCATTCTACTGTGTCCTTGGATACTTGGCCTGCCTGGCACTGGGAAGCTTCAGTTTGGCTTTCTTGGCCAAGAATCTGCCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165921.2
CDS GCA 90 bp TGCCATTCCCTCCTTCCACAATCTTCTGAATCCAGGACTACCTTCTaGACTGCACACAGAGGATGGCATCTTTCTACTTCCTGTGGCAAC +
Preference number: 5 (lower is better)
Translates to: CHSLLPQSSESRTTF*TAHRGWHLSTSCGN
Trigger: GTTGCCACAGGAAGTAGAAAGATGCCATCCTCTGTGTGCAGTGCAGAAGGTAGTCCTGGATTCAGAAGATTGTGGAAGGAGGGAATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165921.2
CDS CCA 90 bp TACCTTCTGCACTGCACACAGAGGATGGCATCTTTCTACTTCCTGTaGCAACCTCAAGCATGTCTACATATAAGTGAAAGTTTCGACCAT +
Preference number: 5 (lower is better)
Translates to: YLLHCTQRMASFYFL*QPQACLHISESFDH
Trigger: ATGGTCGAAACTTTCACTTATATGTAGACATGCTTGAGGTTGCCACAGGAAGTAGAAAGATGCCATCCTCTGTGTGCAGTGCAGAAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165921.2
CDS CCA 90 bp AGTGGATCTTTCTTAGAAAGGAGTTTACCTTCAAGCAGTGAGAACTaGCTCCTTTCCCATTGTCTATTGCCTGATTATCAACCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: SGSFLERSLPSSSEN*LLSHCLLPDYQPAA
Trigger: TGCAGCAGGTTGATAATCAGGCAATAGACAATGGGAAAGGAGCCAGTTCTCACTGCTTGAAGGTAAACTCCTTTCTAAGAAAGATCCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165921.2
CDS CCA 72 bp GAATCCAGGACTACCTTCTGCACTGCACACAGAGGATaGCATCTTTCTACTTCCTGTGGCAACCTCAAGCAT +
Preference number: 6 (lower is better)
Translates to: ESRTTFCTAHRG*HLSTSCGNLKH
Trigger: ATGCTTGAGGTTGCCACAGGAAGTAGAAAGATGCCATCCTCTGTGTGCAGTGCAGAAGGTAGTCCTGGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165921.2
CDS GCA 72 bp CTCCTTCCACAATCTTCTGAATCCAGGACTACCTTCTaGACTGCACACAGAGGATGGCATCTTTCTACTTCC +
Preference number: 6 (lower is better)
Translates to: LLPQSSESRTTF*TAHRGWHLSTS
Trigger: GGAAGTAGAAAGATGCCATCCTCTGTGTGCAGTGCAGAAGGTAGTCCTGGATTCAGAAGATTGTGGAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165921.2
CDS CAA 90 bp CTCCCTGGGTCTGTGACTTTGAAAGCAAGAACCACAGTGACTGTTTaGGCCAGAACTGTGGAAACAGCCACAGTGAACACAATTCCAAAT +
Preference number: 6 (lower is better)
Translates to: LPGSVTLKARTTVTV*ARTVETATVNTIPN
Trigger: ATTTGGAATTGTGTTCACTGTGGCTGTTTCCACAGTTCTGGCCAAAACAGTCACTGTGGTTCTTGCTTTCAAAGTCACAGACCCAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165921.2
CDS CAA 90 bp CCTGATACCAGGAAGTTTCTCAATCTTCTCCCTGGGTCTGTGACTTaGAAAGCAAGAACCACAGTGACTGTTTTGGCCAGAACTGTGGAA +
Preference number: 6 (lower is better)
Translates to: PDTRKFLNLLPGSVT*KARTTVTVLARTVE
Trigger: TTCCACAGTTCTGGCCAAAACAGTCACTGTGGTTCTTGCTTTCAAAGTCACAGACCCAGGGAGAAGATTGAGAAACTTCCTGGTATCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165921.2
CDS CAA 90 bp AGTTTACCTTCAAGCAGTGAGAACTGGCTCCTTTCCCATTGTCTATaGCCTGATTATCAACCTGCTGCAAATTCATCTCATGGAGTGCAT +
Preference number: 6 (lower is better)
Translates to: SLPSSSENWLLSHCL*PDYQPAANSSHGVH
Trigger: ATGCACTCCATGAGATGAATTTGCAGCAGGTTGATAATCAGGCAATAGACAATGGGAAAGGAGCCAGTTCTCACTGCTTGAAGGTAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165921.2
CDS TCA 72 bp GTGCCATCCCCAAAGGGTCTTCATAGCTTAGGAAGGTaGCACCTTTCTGAATACATTTGTTCTGTTCTGTAT +
Preference number: 6 (lower is better)
Translates to: VPSPKGLHSLGR*HLSEYICSVLY
Trigger: ATACAGAACAGAACAAATGTATTCAGAAAGGTGTCACCTTCCTAAGCTATGAAGACCCTTTGGGGATGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165921.2
CDS CAA 90 bp GTTCTGTTCTGTATTGGCATATTGGTATTCTGGACAATTCACACATaGATCCATATTTGTCTCATTAGAAATTTCATTTTCAGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: VLFCIGILVFWTIHT*IHICLIRNFIFRAG
Trigger: CCCTGCCCTGAAAATGAAATTTCTAATGAGACAAATATGGATCAATGTGTGAATTGTCCAGAATACCAATATGCCAATACAGAACAGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165921.2