Pregenerated sensors for VMN2R32 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096743Ensembl transcript IDs: ENSMUST00000094866.7
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCTTATGGTGCATATTTGTTGGGGGCTTCACATCAGCTTGTGTATaGTCTCTGGTTAGAGGCTCAGTGTCTGAGAGATCTTGCTTGTCC | + |
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Preference number: 1 (lower is better) Translates to: VLWCIFVGGFTSACV*SLVRGSVSERSCLS Trigger: GGACAAGCAAGATCTCTCAGACACTGAGCCTCTAACCAGAGATCATACACAAGCTGATGTGAAGCCCCCAACAAATATGCACCATAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| 3UTR TCA 90 bp | CTTCTTCCAAATATTCCCAATTCAGCCACAGAATCCCTGGGCTTCTaGTCATTGTTGGATATAATATATTTGTATTTGACAGCAGAAAAG | + |
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Preference number: 1 (lower is better) Translates to: LLPNIPNSATESLGF*SLLDIIYLYLTAEK Trigger: CTTTTCTGCTGTCAAATACAAATATATTATATCCAACAATGATCAGAAGCCCAGGGATTCTGTGGCTGAATTGGGAATATTTGGAAGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAGCAGGAGTGGGTTGGTTGGGGATCAGGGTGGTGAGAGTATATAGGGGAGCACTTCCCAATCCCTaGGGACTTAAGTCTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: LEAGVGWLGIRVVRVYRGALPNP*GLKSLW Trigger: CCAGAGAGACTTAAGTCCCCAGGGATTGGGAAGTGC...TCCCCTATATACTCTCACCACCCTGATCCCCAACCAACCCACTCCTGCTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| 3UTR-3UTR CCA 90 bp | CTACATCCTCAATGCCCAGCACTTCCCAATCCCTGGGGACTTAAGTCTCTCTGGCTTGTGTATGATCTCTaGTTAGAGGCTCAGTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LHPQCPALPNPWGLKSLWLVYDL*LEAQCL Trigger: CAGACACTGAGCCTCTAACCAGAGATCATACACAAG...CCAGAGAGACTTAAGTCCCCAGGGATTGGGAAGTGCTGGGCATTGAGGATGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| 3UTR-3UTR CCA 90 bp | AACTCCTCTGCCATCTCAAAGATGATATCCCTACATCCTCAATGCCCAGCACTTCAGCCACAGAATCCCTaGGCTTCTGATCATTGTTGG | + |
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Preference number: 2 (lower is better) Translates to: NSSAISKMISLHPQCPALQPQNP*ASDHCW Trigger: CCAACAATGATCAGAAGCCCAGGGATTCTGTGGCTG...AAGTGCTGGGCATTGAGGATGTAGGGATATCATCTTTGAGATGGCAGAGGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| 3UTR-3UTR CCA 90 bp | CTACATCCTCAATGCCCAGCACTTCCCAATCCCTGGGGACTTAAGTCTCTCTGGTGTGTGTGCTCTTACTaGAAATCAGAAAATAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: LHPQCPALPNPWGLKSLWCVCSY*KSENKF Trigger: GAACTTATTTTCTGATTTCCAGTAAGAGCACACACA...CCAGAGAGACTTAAGTCCCCAGGGATTGGGAAGTGCTGGGCATTGAGGATGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| 3UTR-3UTR CCA 90 bp | AACTCCTCTGCCATCTCAAAGATGATATCCCTACATCCTCAATGCCCAGCACTTCTTATCAACGGTTTTTaGAAGTTACCAGAGGGCAAT | + |
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Preference number: 2 (lower is better) Translates to: NSSAISKMISLHPQCPALLINGF*KLPEGN Trigger: ATTGCCCTCTGGTAACTTCCAAAAACCGTTGATAAG...AAGTGCTGGGCATTGAGGATGTAGGGATATCATCTTTGAGATGGCAGAGGAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| 3UTR-3UTR CCA 90 bp | AACTCCTCTGCCATCTCAAAGATGATATCCCTACATCCTCAATGCCCAGCACTTGAGTGCAAGATTTTATaGACACTGTACATAAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: NSSAISKMISLHPQCPALECKIL*TLYISS Trigger: TGAACTTATGTACAGTGTCCATAAAATCTTGCACTC...AAGTGCTGGGCATTGAGGATGTAGGGATATCATCTTTGAGATGGCAGAGGAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| 3UTR-3UTR CCA 90 bp | AATGTCAGTAGTTTTACCTATCCCTTCCATAACTACAATATCAATAGCACGTTGATGGTGCATATTTGTTaGGGGCTTCACATCAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: NVSSFTYPFHNYNINSTLMVHIC*GLHISL Trigger: CAAGCTGATGTGAAGCCCCCAACAAATATGCACCAT...CAACGTGCTATTGATATTGTAGTTATGGAAGGGATAGGTAAAACTACTGACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| 3UTR GCA 72 bp | GATCTTGTGAAGATTATATGCCCCAGTAGAGGGGAATaGCAGGGTCTGGAAGCAGGAGTGGGTTGGTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: DLVKIICPSRGE*QGLEAGVGWLG Trigger: CCCCAACCAACCCACTCCTGCTTCCAGACCCTGGCATTCCCCTCTACTGGGGCATATAATCTTCACAAGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| 3UTR TCA 72 bp | CTTCCTCATCTAACAACTCCTCTGCCATCTCAAAGATaGTATCCCTACATCCTCAATGCCCAGCACTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: LPHLTTPLPSQR*YPYILNAQHFP Trigger: TGGGAAGTGCTGGGCATTGAGGATGTAGGGATATCATCTTTGAGATGGCAGAGGAGTTGTTAGATGAGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR TCA 90 bp | CTGGAAGCAGGAGTGGGTTGGTTGGGGATCAGGGTGGTGAGAGTATATAGGGGAGAACAGCTGCCAGGATaGAAGCACAAGATAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: LEAGVGWLGIRVVRVYRGEQLPG*KHKIIP Trigger: TGGGATTATCTTGTGCTTTCATCCTGGCAGCTGTTC...TCCCCTATATACTCTCACCACCCTGATCCCCAACCAACCCACTCCTGCTTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR TCA 90 bp | CTGGAAGCAGGAGTGGGTTGGTTGGGGATCAGGGTGGTGAGAGTATATAGGGGAAGAAATTGGTTTCCTTaGTCGTCATCTGGGATGACA | + |
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Preference number: 4 (lower is better) Translates to: LEAGVGWLGIRVVRVYRGRNWFP*SSSGMT Trigger: TGTCATCCCAGATGACGATCAAGGAAACCAATTTCT...TCCCCTATATACTCTCACCACCCTGATCCCCAACCAACCCACTCCTGCTTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR TCA 90 bp | CTCAGCTTCTTCCAAATATTCCCAATTCAGCCACAGAATCCCTGGGCTTCTGATCCAAGAAAGCCAAAGTaGAGCTTCCCAGTGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LSFFQIFPIQPQNPWASDPRKPK*SFPVPG Trigger: GCCTGGCACTGGGAAGCTTCACTTTGGCTTTCTTGG...ATCAGAAGCCCAGGGATTCTGTGGCTGAATTGGGAATATTTGGAAGAAGCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR CCA 90 bp | CTACATCCTCAATGCCCAGCACTTCCCAATCCCTGGGGACTTAAGTCTCTCTGGGGAGGGCATGGGCTATaGCATGCACAACATTATATA | + |
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Preference number: 4 (lower is better) Translates to: LHPQCPALPNPWGLKSLWGGHGL*HAQHYI Trigger: TATATAATGTTGTGCATGCCATAGCCCATGCCCTCC...CCAGAGAGACTTAAGTCCCCAGGGATTGGGAAGTGCTGGGCATTGAGGATGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR CCA 90 bp | CTGGAAGCAGGAGTGGGTTGGTTGGGGATCAGGGTGGTGAGAGTATATAGGGGAAATAATCTTTTTCAGTaGGTGTCTGAACAGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LEAGVGWLGIRVVRVYRGNNLFQ*VSEQLP Trigger: TGGCAGCTGTTCAGACACCCACTGAAAAAGATTATT...TCCCCTATATACTCTCACCACCCTGATCCCCAACCAACCCACTCCTGCTTCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR CCA 90 bp | CTACATCCTCAATGCCCAGCACTTCCCAATCCCTGGGGACTTAAGTCTCTCTGGTCTCAATCTTCTTCCTaGGTCTGTGACTTTGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LHPQCPALPNPWGLKSLWSQSSS*VCDFES Trigger: GCTTTCAAAGTCACAGACCCAGGAAGAAGATTGAGA...CCAGAGAGACTTAAGTCCCCAGGGATTGGGAAGTGCTGGGCATTGAGGATGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR GCA 90 bp | CTGGAAGCAGGAGTGGGTTGGTTGGGGATCAGGGTGGTGAGAGTATATAGGGGAATTCCAAATGTGATCTaGTGTAAGACACAGATGACT | + |
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Preference number: 4 (lower is better) Translates to: LEAGVGWLGIRVVRVYRGIPNVI*CKTQMT Trigger: AGTCATCTGTGTCTTACAGCAGATCACATTTGGAAT...TCCCCTATATACTCTCACCACCCTGATCCCCAACCAACCCACTCCTGCTTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR CCA 90 bp | CTACATCCTCAATGCCCAGCACTTCCCAATCCCTGGGGACTTAAGTCTCTCTGGTGTTCTGTTCTGTGTTaGCATATTGGTATTCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: LHPQCPALPNPWGLKSLWCSVLC*HIGILD Trigger: GTCCAGAATACCAATATGCCAACACAGAACAGAACA...CCAGAGAGACTTAAGTCCCCAGGGATTGGGAAGTGCTGGGCATTGAGGATGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR TCA 90 bp | CTCAGCTTCTTCCAAATATTCCCAATTCAGCCACAGAATCCCTGGGCTTCTGATAAGCTAGAACCACAGTaGCTGTTTTGGCCAGAACTG | + |
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Preference number: 4 (lower is better) Translates to: LSFFQIFPIQPQNPWASDKLEPQ*LFWPEL Trigger: CAGTTCTGGCCAAAACAGTCACTGTGGTTCTAGCTT...ATCAGAAGCCCAGGGATTCTGTGGCTGAATTGGGAATATTTGGAAGAAGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR TCA 90 bp | AACTCCTCTGCCATCTCAAAGATGATATCCCTACATCCTCAATGCCCAGCACTTGCTGTAAGACACAGATaGCTTTGTTTGGAAGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: NSSAISKMISLHPQCPALAVRHR*LCLEGQ Trigger: TTGGCCTTCCAAACAAAGTCATCTGTGTCTTACAGC...AAGTGCTGGGCATTGAGGATGTAGGGATATCATCTTTGAGATGGCAGAGGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR GCA 90 bp | AACTCCTCTGCCATCTCAAAGATGATATCCCTACATCCTCAATGCCCAGCACTTCTTGGCTTCATTGAATaGATCAGGCAGATTCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: NSSAISKMISLHPQCPALLGFIE*IRQILG Trigger: GCCAAGAATCTGCCTGATGCATTCAATGAAGCCAAG...AAGTGCTGGGCATTGAGGATGTAGGGATATCATCTTTGAGATGGCAGAGGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR CCA 90 bp | CTACATCCTCAATGCCCAGCACTTCCCAATCCCTGGGGACTTAAGTCTCTCTGGACAGATGACTTTGTTTaGAAGGCCAATGAAGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: LHPQCPALPNPWGLKSLWTDDFV*KANEEK Trigger: TTTTTCTTCATTGGCCTTCCAAACAAAGTCATCTGT...CCAGAGAGACTTAAGTCCCCAGGGATTGGGAAGTGCTGGGCATTGAGGATGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR CCA 90 bp | AACTCCTCTGCCATCTCAAAGATGATATCCCTACATCCTCAATGCCCAGCACTTGGCATATTGGTATTCTaGACAATTCACGCATTGATC | + |
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Preference number: 4 (lower is better) Translates to: NSSAISKMISLHPQCPALGILVF*TIHALI Trigger: GATCAATGCGTGAATTGTCCAGAATACCAATATGCC...AAGTGCTGGGCATTGAGGATGTAGGGATATCATCTTTGAGATGGCAGAGGAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR TCA 90 bp | AACTCCTCTGCCATCTCAAAGATGATATCCCTACATCCTCAATGCCCAGCACTTATAAATCTGTGTTTCTaGGATGGAACCATGTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: NSSAISKMISLHPQCPALINLCF*DGTMSV Trigger: TACAGACATGGTTCCATCTCAGAAACACAGATTTAT...AAGTGCTGGGCATTGAGGATGTAGGGATATCATCTTTGAGATGGCAGAGGAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR TCA 90 bp | AACTCCTCTGCCATCTCAAAGATGATATCCCTACATCCTCAATGCCCAGCACTTAAGGTGACACCTTTCTaGATACATTTGTTCTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: NSSAISKMISLHPQCPALKVTPF*IHLFCS Trigger: AGAACAGAACAAATGTATTCAGAAAGGTGTCACCTT...AAGTGCTGGGCATTGAGGATGTAGGGATATCATCTTTGAGATGGCAGAGGAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR TCA 90 bp | CTCAGCTTCTTCCAAATATTCCCAATTCAGCCACAGAATCCCTGGGCTTCTGATATACAATTCCAAATGTaGTCTGCTGTAAGACACAGA | + |
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Preference number: 4 (lower is better) Translates to: LSFFQIFPIQPQNPWASDIQFQM*SAVRHR Trigger: TCTGTGTCTTACAGCAGATCACATTTGGAATTGTAT...ATCAGAAGCCCAGGGATTCTGTGGCTGAATTGGGAATATTTGGAAGAAGCTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR CCA 90 bp | ATCAGAACTGCACACAAAGGGAAATCTCTGAAAGAAATTAGGTTCATGCAAATGTTGCCCTTTGTGCTATaGTACACAGGGAGGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: IRTAHKGKSLKEIRFMQMLPFVL*YTGRKV Trigger: CACCTTCCTCCCTGTGTACCATAGCACAAAGGGCAA...CATTTGCATGAACCTAATTTCTTTCAGAGATTTCCCTTTGTGTGCAGTTCTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR CCA 90 bp | ATCAGAACTGCACACAAAGGGAAATCTCTGAAAGAAATTAGGTTCATGCAAATGTCCTTGATCGTCATCTaGGATGACAAGGCCAATCCA | + |
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Preference number: 4 (lower is better) Translates to: IRTAHKGKSLKEIRFMQMSLIVI*DDKANP Trigger: TGGATTGGCCTTGTCATCCCAGATGACGATCAAGGA...CATTTGCATGAACCTAATTTCTTTCAGAGATTTCCCTTTGTGTGCAGTTCTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR CCA 90 bp | AGACACATGCACTATAACCCAATATTTGGTGGTTATGTACCAACTTTACATTTGATCTCATGGAGGGCATaGGCTATGGCATGCACAACA | + |
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Preference number: 4 (lower is better) Translates to: RHMHYNPIFGGYVPTLHLISWRA*AMACTT Trigger: TGTTGTGCATGCCATAGCCCATGCCCTCCATGAGAT...CAAATGTAAAGTTGGTACATAACCACCAAATATTGGGTTATAGTGCATGTGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR TCA 90 bp | AATGTCAGTAGTTTTACCTATCCCTTCCATAACTACAATATCAATAGCACGTTGTTTTCAGTGGGTGTCTaGACAGCTGCCAGGATGAAA | + |
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Preference number: 4 (lower is better) Translates to: NVSSFTYPFHNYNINSTLFSVGV*TAARMK Trigger: TTTCATCCTGGCAGCTGTTCAGACACCCACTGAAAA...CAACGTGCTATTGATATTGTAGTTATGGAAGGGATAGGTAAAACTACTGACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR TCA 90 bp | AATGTCAGTAGTTTTACCTATCCCTTCCATAACTACAATATCAATAGCACGTTGAAAGTACCACAGCTGTaGATGCAGAGAAGCAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: NVSSFTYPFHNYNINSTLKVPQL*MQRSRR Trigger: CCTTCTGCTTCTCTGCATTCACAGCTGTGGTACTTT...CAACGTGCTATTGATATTGTAGTTATGGAAGGGATAGGTAAAACTACTGACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR TCA 90 bp | ATCAGAACTGCACACAAAGGGAAATCTCTGAAAGAAATTAGGTTCATGCAAATGCCATTATCTATTGCCTaGTTATCAGCCTGTTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: IRTAHKGKSLKEIRFMQMPLSIA*LSACCR Trigger: TCTGCAACAGGCTGATAATCAGGCAATAGATAATGG...CATTTGCATGAACCTAATTTCTTTCAGAGATTTCCCTTTGTGTGCAGTTCTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR TCA 90 bp | ATCAGAACTGCACACAAAGGGAAATCTCTGAAAGAAATTAGGTTCATGCAAATGAGAACTTGGCTTCATTaGATGCATCAGGCAGATTCT | + |
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Preference number: 4 (lower is better) Translates to: IRTAHKGKSLKEIRFMQMRTWLH*MHQADS Trigger: AGAATCTGCCTGATGCATTCAATGAAGCCAAGTTCT...CATTTGCATGAACCTAATTTCTTTCAGAGATTTCCCTTTGTGTGCAGTTCTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR TCA 90 bp | ATCAGAACTGCACACAAAGGGAAATCTCTGAAAGAAATTAGGTTCATGCAAATGGAGAGATTCGCAAAGTaGACAATGTCATATTCATCC | + |
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Preference number: 4 (lower is better) Translates to: IRTAHKGKSLKEIRFMQMERFAK*TMSYSS Trigger: GGATGAATATGACATTGTTCACTTTGCGAATCTCTC...CATTTGCATGAACCTAATTTCTTTCAGAGATTTCCCTTTGTGTGCAGTTCTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR TCA 90 bp | ATCAGAACTGCACACAAAGGGAAATCTCTGAAAGAAATTAGGTTCATGCAAATGGTGGTAAATATGGGCTaGACTTTCCTAACTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: IRTAHKGKSLKEIRFMQMVVNMG*TFLTSS Trigger: AGATGAAGTTAGGAAAGTTCAGCCCATATTTACCAC...CATTTGCATGAACCTAATTTCTTTCAGAGATTTCCCTTTGTGTGCAGTTCTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR CCA 90 bp | AATGTCAGTAGTTTTACCTATCCCTTCCATAACTACAATATCAATAGCACGTTGGCACACAGAACACATTaGAGTAGGGAACATATAGGA | + |
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Preference number: 4 (lower is better) Translates to: NVSSFTYPFHNYNINSTLAHRTH*SREHIG Trigger: TCCTATATGTTCCCTACTCCAATGTGTTCTGTGTGC...CAACGTGCTATTGATATTGTAGTTATGGAAGGGATAGGTAAAACTACTGACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR TCA 90 bp | AGACACATGCACTATAACCCAATATTTGGTGGTTATGTACCAACTTTACATTTGCATAGCTTAGGAAGGTaGCACCTTTCTGAATACATT | + |
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Preference number: 4 (lower is better) Translates to: RHMHYNPIFGGYVPTLHLHSLGR*HLSEYI Trigger: AATGTATTCAGAAAGGTGTCACCTTCCTAAGCTATG...CAAATGTAAAGTTGGTACATAACCACCAAATATTGGGTTATAGTGCATGTGTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR GCA 90 bp | ATCAGAACTGCACACAAAGGGAAATCTCTGAAAGAAATTAGGTTCATGCAAATGGCATGGGCTATGGCATaGACAACATTATATATGTTA | + |
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Preference number: 4 (lower is better) Translates to: IRTAHKGKSLKEIRFMQMAWAMA*TTLYML Trigger: TAACATATATAATGTTGTGCATGCCATAGCCCATGC...CATTTGCATGAACCTAATTTCTTTCAGAGATTTCCCTTTGTGTGCAGTTCTGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR CCA 90 bp | AATGTCAGTAGTTTTACCTATCCCTTCCATAACTACAATATCAATAGCACGTTGTCAAGCAGTGAGAACTaGCTCCTTTTCCATTATCTA | + |
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Preference number: 4 (lower is better) Translates to: NVSSFTYPFHNYNINSTLSSSEN*LLFHYL Trigger: TAGATAATGGAAAAGGAGCCAGTTCTCACTGCTTGA...CAACGTGCTATTGATATTGTAGTTATGGAAGGGATAGGTAAAACTACTGACATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR CCA 90 bp | AGACACATGCACTATAACCCAATATTTGGTGGTTATGTACCAACTTTACATTTGTCTGTGTTTCTGAGATaGAACCATGTCTGTACAAAA | + |
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Preference number: 4 (lower is better) Translates to: RHMHYNPIFGGYVPTLHLSVFLR*NHVCTK Trigger: TTTTGTACAGACATGGTTCCATCTCAGAAACACAGA...CAAATGTAAAGTTGGTACATAACCACCAAATATTGGGTTATAGTGCATGTGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS-3UTR GCA 90 bp | AATGTCAGTAGTTTTACCTATCCCTTCCATAACTACAATATCAATAGCACGTTGTTTTCCATTATCTATTaGCTGATTATCAGCCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: NVSSFTYPFHNYNINSTLFSIIY*LIISLL Trigger: CAACAGGCTGATAATCAGGCAATAGATAATGGAAAA...CAACGTGCTATTGATATTGTAGTTATGGAAGGGATAGGTAAAACTACTGACATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS GCA 90 bp | GTTTACCTTCAAGCAGTGAGAACTGGCTCCTTTTCCATTATCTATTaGCTGATTATCAGCCTGTTGCAGATTCATCTCATGGAGGGCATG | + |
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Preference number: 5 (lower is better) Translates to: VYLQAVRTGSFSIIY*LIISLLQIHLMEGM Trigger: CATGCCCTCCATGAGATGAATCTGCAACAGGCTGATAATCAGGCAATAGATAATGGAAAAGGAGCCAGTTCTCACTGCTTGAAGGTAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS TCA 90 bp | TCATGGAGGGCATGGGCTATGGCATGCACAACATTATATATGTTATaGCTATTATCACTAAAGGCCATGTCAAGCTTCTGTTCCATTAGC | + |
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Preference number: 5 (lower is better) Translates to: SWRAWAMACTTLYML*LLSLKAMSSFCSIS Trigger: GCTAATGGAACAGAAGCTTGACATGGCCTTTAGTGATAATAGTCATAACATATATAATGTTGTGCATGCCATAGCCCATGCCCTCCATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS CAA 90 bp | CTTCCTGGGTCTGTGACTTTGAAAGCTAGAACCACAGTGACTGTTTaGGCCAGAACTGTGGAAACAGCTACAGTAAATACAATTCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: LPGSVTLKARTTVTV*ARTVETATVNTIPN Trigger: ATTTGGAATTGTATTTACTGTAGCTGTTTCCACAGTTCTGGCCAAAACAGTCACTGTGGTTCTAGCTTTCAAAGTCACAGACCCAGGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS TCA 72 bp | AATCTTTTTCAGTGGGTGTCTGAACAGCTGCCAGGATaGAAGCACAAGATAATCCCAAATATTCATCCGTTA | + |
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Preference number: 6 (lower is better) Translates to: NLFQWVSEQLPG*KHKIIPNIHPL Trigger: TAACGGATGAATATTTGGGATTATCTTGTGCTTTCATCCTGGCAGCTGTTCAGACACCCACTGAAAAAGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS CCA 72 bp | CCTGTTGCAGATTCATCTCATGGAGGGCATGGGCTATaGCATGCACAACATTATATATGTTATGACTATTAT | + |
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Preference number: 6 (lower is better) Translates to: PVADSSHGGHGL*HAQHYICYDYY Trigger: ATAATAGTCATAACATATATAATGTTGTGCATGCCATAGCCCATGCCCTCCATGAGATGAATCTGCAACAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS TCA 72 bp | GCATGGGCTATGGCATGCACAACATTATATATGTTATaGCTATTATCACTAAAGGCCATGTCAAGCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: AWAMACTTLYML*LLSLKAMSSFC Trigger: ACAGAAGCTTGACATGGCCTTTAGTGATAATAGTCATAACATATATAATGTTGTGCATGCCATAGCCCATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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| CDS CAA 90 bp | ATTTCATCCAAATTTATTCTCCAAAAGCACCTGGGATCAATGAAATaGGCCATGAGAAGTGTAATATTAAGGAGGAAGAAGACTCCCATG | + |
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Preference number: 6 (lower is better) Translates to: ISSKFILQKHLGSMK*AMRSVILRRKKTPM Trigger: CATGGGAGTCTTCTTCCTCCTTAATATTACACTTCTCATGGCCAATTTCATTGATCCCAGGTGCTTTTGGAGAATAAATTTGGATGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094866.7 |
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