Pregenerated sensors for VMN2R31 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096373Ensembl transcript IDs: ENSMUST00000075108.9
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTGGGCAACTGCTGACATGGGGGCCAAATTCAGGCGCCAGGCAGTaGGCACTCTGCATCTTATCTCTGGAACATAGATCCTCCTTGACA | + |
|
Preference number: 1 (lower is better) Translates to: SGQLLTWGPNSGARQ*ALCILSLEHRSSLT Trigger: TGTCAAGGAGGATCTATGTTCCAGAGATAAGATGCAGAGTGCCCACTGCCTGGCGCCTGAATTTGGCCCCCATGTCAGCAGTTGCCCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR TCA 90 bp | GGGTCGAGGGAGAATTATACAAATAACAAAGAAGTGGGCAACTGCTaGCATGGGGGCCAAATTCAGGCGCCAGGCAGTGGGCACTCTGCA | + |
|
Preference number: 1 (lower is better) Translates to: GSRENYTNNKEVGNC*HGGQIQAPGSGHSA Trigger: TGCAGAGTGCCCACTGCCTGGCGCCTGAATTTGGCCCCCATGTCAGCAGTTGCCCACTTCTTTGTTATTTGTATAATTCTCCCTCGACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CCA 90 bp | GTGCCTTCTCAGCCTACAGAGAGGAAGAATGACCTCCTTCCCCTATaGAGGGACCCTGCTGTTCAGGGTTATATTCACACTGCACTCTCC | + |
|
Preference number: 1 (lower is better) Translates to: VPSQPTERKNDLLPL*RDPAVQGYIHTALS Trigger: GGAGAGTGCAGTGTGAATATAACCCTGAACAGCAGGGTCCCTCCATAGGGGAAGGAGGTCATTCTTCCTCTCTGTAGGCTGAGAAGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR GCA 90 bp | GGTTTGTTGAGACTGCTGGTGTTTCTATGGGTTGTCCTCCTCCTCTaGTTCTTGCAACTATTCCCAATTCATCCACAGGGGCCCCTGGCT | + |
|
Preference number: 1 (lower is better) Translates to: GLLRLLVFLWVVLLL*FLQLFPIHPQGPLA Trigger: AGCCAGGGGCCCCTGTGGATGAATTGGGAATAGTTGCAAGAAGCAGAGGAGGAGGACAACCCATAGAAACACCAGCAGTCTCAACAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR GCA 90 bp | AAGGCTCTTGGTCTTATGAAGATTATATTCCCTAGTAGAGGAAAATaGCCGGGTCAGGAAGCAGGAGTGGGTGGGTTGGGGAGCAGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: KALGLMKIIFPSRGK*PGQEAGVGGLGSRA Trigger: TGCCCTGCTCCCCAACCCACCCACTCCTGCTTCCTGACCCGGGCATTTTCCTCTACTAGGGAATATAATCTTCATAAGACCAAGAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CCA 90 bp | GAATATGGGAGGGGTCGAGGGAGAATTATACAAATAACAAAGAAGTaGGCAACTGCTGACATGGGGGCCAAATTCAGGCGCCAGGCAGTG | + |
|
Preference number: 1 (lower is better) Translates to: EYGRGRGRIIQITKK*ATADMGAKFRRQAV Trigger: CACTGCCTGGCGCCTGAATTTGGCCCCCATGTCAGCAGTTGCCCACTTCTTTGTTATTTGTATAATTCTCCCTCGACCCCTCCCATATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR TCA 90 bp | GTTGGCCTACTCGACCATCATTGGCAGGAAAGGCTCTTGGTCTTATaGAGATTATATTCCCTAGTAGAGGAAAATGCCCGGGTCAGGAAG | + |
|
Preference number: 1 (lower is better) Translates to: VGLLDHHWQERLLVL*RLYSLVEENARVRK Trigger: CTTCCTGACCCGGGCATTTTCCTCTACTAGGGAATATAATCTTCATAAGACCAAGAGCCTTTCCTGCCAATGATGGTCGAGTAGGCCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR TCA 90 bp | GAGTGTTCCTCTTTTACCACATCCTCGCCAGCATCTGGTGTCACCTaGATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCT | + |
|
Preference number: 1 (lower is better) Translates to: ECSSFTTSSPASGVT*IFDLSHSDWCEVES Trigger: AGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACACCAGATGCTGGCGAGGATGTGGTAAAAGAGGAACACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CCA 90 bp | AGTACCCACAGACCTCAAGTCTTTAGCTGCATATTTAGCAGAAGTTaGCCTACTCGACCATCATTGGCAGGAAAGGCTCTTGGTCTTATG | + |
|
Preference number: 1 (lower is better) Translates to: STHRPQVFSCIFSRS*PTRPSLAGKALGLM Trigger: CATAAGACCAAGAGCCTTTCCTGCCAATGATGGTCGAGTAGGCCAACTTCTGCTAAATATGCAGCTAAAGACTTGAGGTCTGTGGGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR TCA 90 bp | GAAGAGCAGGAGACCAGGAAGGATACCTATCGAGGTCTATTATGCTaGGGTGCCTTCTTTTTAAAGCATACATCACAGGGAATATGGGAG | + |
|
Preference number: 1 (lower is better) Translates to: EEQETRKDTYRGLLC*GAFFLKHTSQGIWE Trigger: CTCCCATATTCCCTGTGATGTATGCTTTAAAAAGAAGGCACCTCAGCATAATAGACCTCGATAGGTATCCTTCCTGGTCTCCTGCTCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CCA 90 bp | TTAAAAACTGCATGGTACTGGTACAGCGACAGACAGATAGATCAGTaGAATAGAATTGAAGGCACAGAAATGAACTCACACATCTATGGT | + |
|
Preference number: 1 (lower is better) Translates to: LKTAWYWYSDRQIDQ*NRIEGTEMNSHIYG Trigger: ACCATAGATGTGTGAGTTCATTTCTGTGCCTTCAATTCTATTCCACTGATCTATCTGTCTGTCGCTGTACCAGTACCATGCAGTTTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR TCA 90 bp | CTAACAGAAGCTTTGCAGTCTTATGAGGTCTCATTTGTCAATTTTTaGTGTTACAGCATAAGCCACTGCTGTTCTGTTCAGGAATTTTCC | + |
|
Preference number: 1 (lower is better) Translates to: LTEALQSYEVSFVNF*CYSISHCCSVQEFS Trigger: GGAAAATTCCTGAACAGAACAGCAGTGGCTTATGCTGTAACATCAAAAATTGACAAATGAGACCTCATAAGACTGCAAAGCTTCTGTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CAA 90 bp | GCACTCTGCATCTTATCTCTGGAACATAGATCCTCCTTGACAGCCTaGGGGGTCAGGCTGGGCTCAGGCGTAACTCATGTCCTTGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: ALCILSLEHRSSLTA*GVRLGSGVTHVLGW Trigger: CCATCCAAGGACATGAGTTACGCCTGAGCCCAGCCTGACCCCCAAGGCTGTCAAGGAGGATCTATGTTCCAGAGATAAGATGCAGAGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGCGAAGAAAAAGACCTGGAGAAAAGGACTTCTTCCACTGGTGTGAACTCCTGGTCAGGAAGCAGGAGTaGGTGGGTTGGGGAGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: ERRKRPGEKDFFHWCELLVRKQE*VGWGAG Trigger: CCCTGCTCCCCAACCCACCCACTCCTGCTTCCTGAC...CAGGAGTTCACACCAGTGGAAGAAGTCCTTTTCTCCAGGTCTTTTTCTTCGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCCACTGGTGTGAACTCCTGTGCTATGTAGTTCTGACTGGTGGATTCAGGAGTATCAGCCTGCACATATaGGGGAGGGTCTGGGTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: FHWCELLCYVVLTGGFRSISLHI*GRVWVV Trigger: GACCACCCAGACCCTCCCTCATATGTGCAGGCTGAT...ACTCCTGAATCCACCAGTCAGAACTACATAGCACAGGAGTTCACACCAGTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CCA 90 bp | GATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTATTTTGATTTGGGAAGCAGGAGTGGGTaGGTTGGGGAGCAGGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: DLSHSDWCEVESQGYFDLGSRSG*VGEQGR Trigger: CCTGCCCTGCTCCCCAACCCACCCACTCCTGCTTCC...CAAATCAAAATAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGGGGTCAGGCTGGGCTCAGGCGTAACTCATGTCCTTGGATGGCAGGGGAAAATGAAGCAAGTGAATaGCAAGTTTTGTGGACTCTA | + |
|
Preference number: 2 (lower is better) Translates to: LGGQAGLRRNSCPWMAGENEASE*QVLWTL Trigger: TAGAGTCCACAAAACTTGTCATTCACTTGCTTCATT...TTCCCCTGCCATCCAAGGACATGAGTTACGCCTGAGCCCAGCCTGACCCCCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGCGAAGAAAAAGACCTGGAGAAAAGGACTTCTTCCACTGGTGTGAACTCCTGGGGTGTGAGGGGGACTaGAAACCTGGAAGGAAATGG | + |
|
Preference number: 2 (lower is better) Translates to: ERRKRPGEKDFFHWCELLGCEGD*KPGRKW Trigger: CCATTTCCTTCCAGGTTTGCAGTCCCCCTCACACCC...CAGGAGTTCACACCAGTGGAAGAAGTCCTTTTCTCCAGGTCTTTTTCTTCGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGCGAAGAAAAAGACCTGGAGAAAAGGACTTCTTCCACTGGTGTGAACTCCTGCCTAGTAGAGGAAAATaGCCGGGTCAGGAAGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: ERRKRPGEKDFFHWCELLPSRGK*PGQEAG Trigger: TCCTGCTTCCTGACCCGGGCATTTTCCTCTACTAGG...CAGGAGTTCACACCAGTGGAAGAAGTCCTTTTCTCCAGGTCTTTTTCTTCGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR TCA 90 bp | AAATGTGTCACTGTGGCATTGAGAGCCTGTGCTCAATCTACACTAAAGTGCAGAACAGGGGCCCCTGGCTaGTGTCCAGTGTTGGATATA | + |
|
Preference number: 2 (lower is better) Translates to: KCVTVALRACAQSTLKCRTGAPG*CPVLDI Trigger: TATATCCAACACTGGACATCAGCCAGGGGCCCCTGT...TCTGCACTTTAGTGTAGATTGAGCACAGGCTCTCAATGCCACAGTGACACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGCGAAGAAAAAGACCTGGAGAAAAGGACTTCTTCCACTGGTGTGAACTCCTGTACAGAGAGGAAGAATaGCCTCCTTCCCCTATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: ERRKRPGEKDFFHWCELLYREEE*PPSPME Trigger: CTCCATAGGGGAAGGAGGTCATTCTTCCTCTCTGTA...CAGGAGTTCACACCAGTGGAAGAAGTCCTTTTCTCCAGGTCTTTTTCTTCGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGCGAAGAAAAAGACCTGGAGAAAAGGACTTCTTCCACTGGTGTGAACTCCTGGGCTCTACCAGTACCTaGCAAATCCAGAAGTGGATG | + |
|
Preference number: 2 (lower is better) Translates to: ERRKRPGEKDFFHWCELLGSTST*QIQKWM Trigger: CATCCACTTCTGGATTTGCCAGGTACTGGTAGAGCC...CAGGAGTTCACACCAGTGGAAGAAGTCCTTTTCTCCAGGTCTTTTTCTTCGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCCACTGGTGTGAACTCCTGTGCTATGTAGTTCTGACTGGTGGATTCAGGAGTACTCATGTCCTTGGATaGCAGGGGAACTCAGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: FHWCELLCYVVLTGGFRSTHVLG*QGNSGR Trigger: TCTTCCTGAGTTCCCCTGCCATCCAAGGACATGAGT...ACTCCTGAATCCACCAGTCAGAACTACATAGCACAGGAGTTCACACCAGTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CAA 90 bp | CCTCTTTTACCACATCCTCGCCAGCATCTGGTGTCACCTGAATTTTaGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: PLLPHPRQHLVSPEF*ILAILTGVRWNLRV Trigger: AACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACACCAGATGCTGGCGAGGATGTGGTAAAAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCCACTGGTGTGAACTCCTGTGCTATGTAGTTCTGACTGGTGGATTCAGGAGTCTGTTAGGGAGATTGTaGAGGGCTCACTTTCTCATG | + |
|
Preference number: 2 (lower is better) Translates to: FHWCELLCYVVLTGGFRSLLGRL*RAHFLM Trigger: CATGAGAAAGTGAGCCCTTCACAATCTCCCTAACAG...ACTCCTGAATCCACCAGTCAGAACTACATAGCACAGGAGTTCACACCAGTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGCGAAGAAAAAGACCTGGAGAAAAGGACTTCTTCCACTGGTGTGAACTCCTGTCCATGAAGACTGACTaGGGGAAGTGGTTGTTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: ERRKRPGEKDFFHWCELLSMKTD*GKWLFL Trigger: CAAAAACAACCACTTCCCTCAGTCAGTCTTCATGGA...CAGGAGTTCACACCAGTGGAAGAAGTCCTTTTCTCCAGGTCTTTTTCTTCGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAGATGTGTCTGCCTCTGGCTATTCTCTCCCTCATATCTACAATAAACCTTTCCTACTCGACCATCATTaGCAGGAAAGGCTCTTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: PDVSASGYSLPHIYNKPFLLDHH*QERLLV Trigger: GACCAAGAGCCTTTCCTGCCAATGATGGTCGAGTAG...GAAAGGTTTATTGTAGATATGAGGGAGAGAATAGCCAGAGGCAGACACATCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGCGAAGAAAAAGACCTGGAGAAAAGGACTTCTTCCACTGGTGTGAACTCCTGTGGCACTGGTACAACTaGCAGTTGTCATGTAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: ERRKRPGEKDFFHWCELLWHWYN*QLSCRR Trigger: TCTTCTACATGACAACTGCCAGTTGTACCAGTGCCA...CAGGAGTTCACACCAGTGGAAGAAGTCCTTTTCTCCAGGTCTTTTTCTTCGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCCACTGGTGTGAACTCCTGTGCTATGTAGTTCTGACTGGTGGATTCAGGAGTAGATGTGTCTGCCTCTaGCTATTCTCTCCCTCATAT | + |
|
Preference number: 2 (lower is better) Translates to: FHWCELLCYVVLTGGFRSRCVCL*LFSPSY Trigger: ATATGAGGGAGAGAATAGCCAGAGGCAGACACATCT...ACTCCTGAATCCACCAGTCAGAACTACATAGCACAGGAGTTCACACCAGTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCCACTGGTGTGAACTCCTGTGCTATGTAGTTCTGACTGGTGGATTCAGGAGTCAATCCCACCAGCAATaGAAGAGTGTTCCTCTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: FHWCELLCYVVLTGGFRSQSHQQ*KSVPLL Trigger: TAAAAGAGGAACACTCTTTCATTGCTGGTGGGATTG...ACTCCTGAATCCACCAGTCAGAACTACATAGCACAGGAGTTCACACCAGTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR GCA 90 bp | CCAGATGTGTCTGCCTCTGGCTATTCTCTCCCTCATATCTACAATAAACCTTTCGACCCTCTTCCTAGCTaGCTGAAAAAGAGACTATCC | + |
|
Preference number: 2 (lower is better) Translates to: PDVSASGYSLPHIYNKPFDPLPS*LKKRLS Trigger: GGATAGTCTCTTTTTCAGGCAGCTAGGAAGAGGGTC...GAAAGGTTTATTGTAGATATGAGGGAGAGAATAGCCAGAGGCAGACACATCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR TCA 90 bp | CCAGATGTGTCTGCCTCTGGCTATTCTCTCCCTCATATCTACAATAAACCTTTCTTTTCCAGAATTTTCTaGGTCCAGGACCTCACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: PDVSASGYSLPHIYNKPFFSRIF*VQDLTQ Trigger: CTGAGTGAGGTCCTGGACTCAGAAAATTCTGGAAAA...GAAAGGTTTATTGTAGATATGAGGGAGAGAATAGCCAGAGGCAGACACATCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGCGAAGAAAAAGACCTGGAGAAAAGGACTTCTTCCACTGGTGTGAACTCCTGTTGAAGGCACAGAAATaGACTCACACATCTATGGTT | + |
|
Preference number: 2 (lower is better) Translates to: ERRKRPGEKDFFHWCELLLKAQK*THTSMV Trigger: AACCATAGATGTGTGAGTTCATTTCTGTGCCTTCAA...CAGGAGTTCACACCAGTGGAAGAAGTCCTTTTCTCCAGGTCTTTTTCTTCGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAGATGTGTCTGCCTCTGGCTATTCTCTCCCTCATATCTACAATAAACCTTTCCAAATAACAAAGAAGTaGGCAACTGCTGACATGGGG | + |
|
Preference number: 2 (lower is better) Translates to: PDVSASGYSLPHIYNKPFQITKK*ATADMG Trigger: CCCCATGTCAGCAGTTGCCCACTTCTTTGTTATTTG...GAAAGGTTTATTGTAGATATGAGGGAGAGAATAGCCAGAGGCAGACACATCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGCGAAGAAAAAGACCTGGAGAAAAGGACTTCTTCCACTGGTGTGAACTCCTGGATGATCTCAGAAGATaGAGATCTTCCATGTTCATG | + |
|
Preference number: 2 (lower is better) Translates to: ERRKRPGEKDFFHWCELLDDLRR*RSSMFM Trigger: CATGAACATGGAAGATCTCCATCTTCTGAGATCATC...CAGGAGTTCACACCAGTGGAAGAAGTCCTTTTCTCCAGGTCTTTTTCTTCGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAGATGTGTCTGCCTCTGGCTATTCTCTCCCTCATATCTACAATAAACCTTTCCCCCCAAAATTCCACTaGAGAACTCCTAAAGCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: PDVSASGYSLPHIYNKPFPPKFH*RTPKAD Trigger: ATCAGCTTTAGGAGTTCTCCAGTGGAATTTTGGGGG...GAAAGGTTTATTGTAGATATGAGGGAGAGAATAGCCAGAGGCAGACACATCTGG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR TCA 90 bp | CCAGATGTGTCTGCCTCTGGCTATTCTCTCCCTCATATCTACAATAAACCTTTCGAGAGATTAGTTCTGTaGGAGGAAATGAAGCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: PDVSASGYSLPHIYNKPFERLVL*EEMKQV Trigger: CACTTGCTTCATTTCCTCTCACAGAACTAATCTCTC...GAAAGGTTTATTGTAGATATGAGGGAGAGAATAGCCAGAGGCAGACACATCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR TCA 90 bp | CCAGATGTGTCTGCCTCTGGCTATTCTCTCCCTCATATCTACAATAAACCTTTCACAGAGGGAAATCTCTaGAAGGAATTAGGTTCATGC | + |
|
Preference number: 2 (lower is better) Translates to: PDVSASGYSLPHIYNKPFTEGNL*KELGSC Trigger: GCATGAACCTAATTCCTTTCAGAGATTTCCCTCTGT...GAAAGGTTTATTGTAGATATGAGGGAGAGAATAGCCAGAGGCAGACACATCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGCGAAGAAAAAGACCTGGAGAAAAGGACTTCTTCCACTGGTGTGAACTCCTGACTACAGAGCAAATGTaGTTAAAAACTGCATGGTAC | + |
|
Preference number: 2 (lower is better) Translates to: ERRKRPGEKDFFHWCELLTTEQM*LKTAWY Trigger: GTACCATGCAGTTTTTAATCACATTTGCTCTGTAGT...CAGGAGTTCACACCAGTGGAAGAAGTCCTTTTCTCCAGGTCTTTTTCTTCGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGCGAAGAAAAAGACCTGGAGAAAAGGACTTCTTCCACTGGTGTGAACTCCTGGGCAGGAAAGGCTCTTaGTCTTATGAAGATTATATT | + |
|
Preference number: 2 (lower is better) Translates to: ERRKRPGEKDFFHWCELLGRKGS*SYEDYI Trigger: AATATAATCTTCATAAGACCAAGAGCCTTTCCTGCC...CAGGAGTTCACACCAGTGGAAGAAGTCCTTTTCTCCAGGTCTTTTTCTTCGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CCA 90 bp | AAATGTGTCACTGTGGCATTGAGAGCCTGTGCTCAATCTACACTAAAGTGCAGAGTTTCATCTATTAGATaGAACATAGGGCCCCCAATG | + |
|
Preference number: 2 (lower is better) Translates to: KCVTVALRACAQSTLKCRVSSIR*NIGPPM Trigger: CATTGGGGGCCCTATGTTCCATCTAATAGATGAAAC...TCTGCACTTTAGTGTAGATTGAGCACAGGCTCTCAATGCCACAGTGACACATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR TCA 90 bp | GATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTATTTTGATTTGTATTTCCATGAAGACTaGCTGAGGGAAGTGGTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: DLSHSDWCEVESQGYFDLYFHED*LREVVV Trigger: AACAACCACTTCCCTCAGTCAGTCTTCATGGAAATA...CAAATCAAAATAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGCGAAGAAAAAGACCTGGAGAAAAGGACTTCTTCCACTGGTGTGAACTCCTGTCTATTATGCTGAGGTaGCTTCTTTTTAAAGCATAC | + |
|
Preference number: 2 (lower is better) Translates to: ERRKRPGEKDFFHWCELLSIMLR*LLFKAY Trigger: GTATGCTTTAAAAAGAAGGCACCTCAGCATAATAGA...CAGGAGTTCACACCAGTGGAAGAAGTCCTTTTCTCCAGGTCTTTTTCTTCGCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAGATGTGTCTGCCTCTGGCTATTCTCTCCCTCATATCTACAATAAACCTTTCTGGCAAATCCAGAAGTaGATGCTCAGTTTCATCTAT | + |
|
Preference number: 2 (lower is better) Translates to: PDVSASGYSLPHIYNKPFWQIQK*MLSFIY Trigger: ATAGATGAAACTGAGCATCCACTTCTGGATTTGCCA...GAAAGGTTTATTGTAGATATGAGGGAGAGAATAGCCAGAGGCAGACACATCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR GCA 90 bp | GATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTATTTTGATTTGTACAGCATAAGCCACTaGTGTTCTGTTCAGGAATTT | + |
|
Preference number: 2 (lower is better) Translates to: DLSHSDWCEVESQGYFDLYSISH*CSVQEF Trigger: AAATTCCTGAACAGAACAGCAGTGGCTTATGCTGTA...CAAATCAAAATAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR TCA 90 bp | GATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTATTTTGATTTGAGGCTCTTGGTCTTATaGAGATTATATTCCCTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: DLSHSDWCEVESQGYFDLRLLVL*RLYSLV Trigger: TACTAGGGAATATAATCTTCATAAGACCAAGAGCCT...CAAATCAAAATAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CCA 90 bp | GAATATGGGAGGGGTCGAGGGAGAATTATACAAATAACAAAGAAGTGGGCAACTTGTGTGTGCTCCTACTaGAAATCAGAAAATATATTC | + |
|
Preference number: 2 (lower is better) Translates to: EYGRGRGRIIQITKKWATCVCSY*KSENIF Trigger: GAATATATTTTCTGATTTCCAGTAGGAGCACACACA...AGTTGCCCACTTCTTTGTTATTTGTATAATTCTCCCTCGACCCCTCCCATATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR GCA 90 bp | ATAAGTGACCCCCAAAATTCCACTGGAGAACTCCTAAAGCTGATAAACAATTTCCTTTCTTTGAAACAATaGCATCTTCCACGAATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: ISDPQNSTGELLKLINNFLSLKQ*HLPRIF Trigger: GAAAATTCGTGGAAGATGGCATTGTTTCAAAGAAAG...GAAATTGTTTATCAGCTTTAGGAGTTCTCCAGTGGAATTTTGGGGGTCACTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR GCA 72 bp | TGGGGGCCAAATTCAGGCGCCAGGCAGTGGGCACTCTaGATCTTATCTCTGGAACATAGATCCTCCTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: WGPNSGARQWAL*ILSLEHRSSLT Trigger: TGTCAAGGAGGATCTATGTTCCAGAGATAAGATGCAGAGTGCCCACTGCCTGGCGCCTGAATTTGGCCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGGGGTCAGGCTGGGCTCAGGCGTAACTCATGTCCTTGGATGGCAGGGGAAGGGAAGTGGTTGTTTTaGTTAATGCATTTTAGACCC | + |
|
Preference number: 3 (lower is better) Translates to: LGGQAGLRRNSCPWMAGEGKWLF*LMHFRP Trigger: GGGTCTAAAATGCATTAACAAAAACAACCACTTCCC...TTCCCCTGCCATCCAAGGACATGAGTTACGCCTGAGCCCAGCCTGACCCCCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR GCA 72 bp | GGTCTTATGAAGATTATATTCCCTAGTAGAGGAAAATaGCCGGGTCAGGAAGCAGGAGTGGGTGGGTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GLMKIIFPSRGK*PGQEAGVGGLG Trigger: CCCCAACCCACCCACTCCTGCTTCCTGACCCGGGCATTTTCCTCTACTAGGGAATATAATCTTCATAAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CCA 72 bp | CAGCCTACAGAGAGGAAGAATGACCTCCTTCCCCTATaGAGGGACCCTGCTGTTCAGGGTTATATTCACACT | + |
|
Preference number: 3 (lower is better) Translates to: QPTERKNDLLPL*RDPAVQGYIHT Trigger: AGTGTGAATATAACCCTGAACAGCAGGGTCCCTCCATAGGGGAAGGAGGTCATTCTTCCTCTCTGTAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR TCA 72 bp | CTTCCTCATCTAACATCTCCTCCCACATTTCCAAGATaGTATCCCTACATCCCCTACACCCAGCCCTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LPHLTSPPTFPR*YPYIPYTQPFP Trigger: TGGGAAGGGCTGGGTGTAGGGGATGTAGGGATATCATCTTGGAAATGTGGGAGGAGATGTTAGATGAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR TCA 72 bp | GAGAATTATACAAATAACAAAGAAGTGGGCAACTGCTaGCATGGGGGCCAAATTCAGGCGCCAGGCAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ENYTNNKEVGNC*HGGQIQAPGSG Trigger: CCCACTGCCTGGCGCCTGAATTTGGCCCCCATGTCAGCAGTTGCCCACTTCTTTGTTATTTGTATAATTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR GCA 72 bp | CCGCGGGATTCAGTTATTTGTGGGTGTGAGGGGGACTaGAAACCTGGAAGGAAATGGGAGGAAGAAAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PRDSVICGCEGD*KPGRKWEEEKE Trigger: TTCTTTTTCTTCCTCCCATTTCCTTCCAGGTTTGCAGTCCCCCTCACACCCACAAATAACTGAATCCCGCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR GCA 72 bp | GTGGCATTGAGAGCCTGTGCTCAATCTACACTAAAGTaGAGAAGAGACCCTCTTCCTAGCTGCCTGAAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VALRACAQSTLK*RRDPLPSCLKK Trigger: CTTTTTCAGGCAGCTAGGAAGAGGGTCTCTTCTGCACTTTAGTGTAGATTGAGCACAGGCTCTCAATGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CCA 72 bp | GATTCAGGAGTGACTATTTCTAGGAGACCTAGCTATTaGTGGTATGGCAGTCCTTCATGGCCATCGCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: DSGVTISRRPSY*WYGSPSWPSLW Trigger: CCAAAGCGATGGCCATGAAGGACTGCCATACCACCAATAGCTAGGTCTCCTAGAAATAGTCACTCCTGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR TCA 72 bp | CTTAGTACAAGGCCATTTGGTCTGTTAGGGAGATTGTaGAGGGCTCACTTTCTCATGGGATGGTCTCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: LSTRPFGLLGRL*RAHFLMGWSLT Trigger: TGTCAGAGACCATCCCATGAGAAAGTGAGCCCTTCACAATCTCCCTAACAGACCAAATGGCCTTGTACTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CCA 72 bp | TCAGGAGTGACTATTTCTAGGAGACCTAGCTATTGGTaGTATGGCAGTCCTTCATGGCCATCGCTTTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SGVTISRRPSYW*YGSPSWPSLWK Trigger: TTTCCAAAGCGATGGCCATGAAGGACTGCCATACCACCAATAGCTAGGTCTCCTAGAAATAGTCACTCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR TCA 72 bp | CCTGTGCTATGTAGTTCTGACTGGTGGATTCAGGAGTaGCTATTTCTAGGAGACCTAGCTATTGGTGGTATG | + |
|
Preference number: 3 (lower is better) Translates to: PVLCSSDWWIQE*LFLGDLAIGGM Trigger: CATACCACCAATAGCTAGGTCTCCTAGAAATAGTCACTCCTGAATCCACCAGTCAGAACTACATAGCACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR GCA 72 bp | GAACTAACCAGTACCCACAGACCTCAAGTCTTTAGCTaGATATTTAGCAGAAGTTGGCCTACTCGACCATCA | + |
|
Preference number: 3 (lower is better) Translates to: ELTSTHRPQVFS*IFSRSWPTRPS Trigger: TGATGGTCGAGTAGGCCAACTTCTGCTAAATATGCAGCTAAAGACTTGAGGTCTGTGGGTACTGGTTAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR GCA 72 bp | AGGAAAATAAGCCAAGCAGTTAGAGTAGCCTATTTGTaGCTTCTCAGCCTACAGAGAGGAAGAATGACCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RKISQAVRVAYL*LLSLQRGRMTS Trigger: GGAGGTCATTCTTCCTCTCTGTAGGCTGAGAAGGCACAAATAGGCTACTCTAACTGCTTGGCTTATTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CCA 72 bp | CGAAGAAAAAGACCTGGAGAAAAGGACTTCTTCCACTaGTGTGAACTCCTGTGCTATGTAGTTCTGACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: RRKRPGEKDFFH*CELLCYVVLTG Trigger: ACCAGTCAGAACTACATAGCACAGGAGTTCACACCAGTGGAAGAAGTCCTTTTCTCCAGGTCTTTTTCTTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCCACTGGTGTGAACTCCTGTGCTATGTAGTTCTGACTGGTGGATTCAGGAGTAATCTCAGGGTTATTTaGATTTGCATTTCCCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: FHWCELLCYVVLTGGFRSNLRVI*ICISLV Trigger: CACCAGGGAAATGCAAATCAAAATAACCCTGAGATT...ACTCCTGAATCCACCAGTCAGAACTACATAGCACAGGAGTTCACACCAGTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR TCA 72 bp | GAGACCAGGAAGGATACCTATCGAGGTCTATTATGCTaGGGTGCCTTCTTTTTAAAGCATACATCACAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ETRKDTYRGLLC*GAFFLKHTSQG Trigger: TCCCTGTGATGTATGCTTTAAAAAGAAGGCACCTCAGCATAATAGACCTCGATAGGTATCCTTCCTGGTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAGATGTGTCTGCCTCTGGCTATTCTCTCCCTCATATCTACAATAAACCTTTCTTCCTCCTTAGACTATaGGCCAATAGCTTGAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: PDVSASGYSLPHIYNKPFFLLRL*ANSLKN Trigger: GTTCTTCAAGCTATTGGCCAATAGTCTAAGGAGGAA...GAAAGGTTTATTGTAGATATGAGGGAGAGAATAGCCAGAGGCAGACACATCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR TCA 72 bp | GATGCTGCCATGCTCCCTACCATAATGATAATGGACTaGACCTCTGAAAGTATAAGCCAGCCAGGATTAATT | + |
|
Preference number: 3 (lower is better) Translates to: DAAMLPTIMIMD*TSESISQPGLI Trigger: AATTAATCCTGGCTGGCTTATACTTTCAGAGGTTCAGTCCATTATCATTATGGTAGGGAGCATGGCAGCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR GCA 72 bp | TTTCCTTATTACAAGTTGGAAAGTCTTCTGGGTAAATaGCCAGGGGAGGTATTGATGGATCCTCTGATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FPYYKLESLLGK*PGEVLMDPLIA Trigger: TGCTATCAGAGGATCCATCAATACCTCCCCTGGGCATTTACCCAGAAGACTTTCCAACTTGTAATAAGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CCA 72 bp | AAATCCAGAAGTGGATGCTCAGTTTCATCTATTAGATaGAACATAGGGCCCCCAATGGAGGAACTAGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: KSRSGCSVSSIR*NIGPPMEELEN Trigger: ATTCTCTAGTTCCTCCATTGGGGGCCCTATGTTCCATCTAATAGATGAAACTGAGCATCCACTTCTGGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAGATGTGTCTGCCTCTGGCTATTCTCTCCCTCATATCTACAATAAACCTTTCAGAATAGGTGTGGCTTaGTTGACAAAAATGTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: PDVSASGYSLPHIYNKPFRIGVA*LTKMCH Trigger: GTGACACATTTTTGTCAACAAAGCCACACCTATTCT...GAAAGGTTTATTGTAGATATGAGGGAGAGAATAGCCAGAGGCAGACACATCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR TCA 72 bp | CAAAATGTGGAGCACTCAGATCTTATTATAGCACTATaGGTTCTTGGATGCTGCCATGCTCCCTACCATAAT | + |
|
Preference number: 3 (lower is better) Translates to: QNVEHSDLIIAL*VLGCCHAPYHN Trigger: ATTATGGTAGGGAGCATGGCAGCATCCAAGAACTCATAGTGCTATAATAAGATCTGAGTGCTCCACATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR GCA 72 bp | CAGGAAGGATACCTATCGAGGTCTATTATGCTGAGGTaGCTTCTTTTTAAAGCATACATCACAGGGAATATG | + |
|
Preference number: 3 (lower is better) Translates to: QEGYLSRSIMLR*LLFKAYITGNM Trigger: CATATTCCCTGTGATGTATGCTTTAAAAAGAAGGCACCTCAGCATAATAGACCTCGATAGGTATCCTTCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR GCA 72 bp | CTCAAGCTGTACTACAGAGCAAATGTGATTAAAAACTaGATGGTACTGGTACAGCGACAGACAGATAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: LKLYYRANVIKN*MVLVQRQTDRS Trigger: TGATCTATCTGTCTGTCGCTGTACCAGTACCATGCAGTTTTTAATCACATTTGCTCTGTAGTACAGCTTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CCA 72 bp | TATGAACATAGTGGAGCATGTTTCCTTATTACAAGTTaGAAAGTCTTCTGGGTAAATGCCCAGGGGAGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: YEHSGACFLITS*KVFWVNAQGRY Trigger: ATACCTCCCCTGGGCATTTACCCAGAAGACTTTCCAACTTGTAATAAGGAAACATGCTCCACTATGTTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CAA 90 bp | AAATGTGTCACTGTGGCATTGAGAGCCTGTGCTCAATCTACACTAAAGTGCAGACACCCAATCTGTTTGTaGATGTTTTGTCTTACTAAC | + |
|
Preference number: 3 (lower is better) Translates to: KCVTVALRACAQSTLKCRHPICL*MFCLTN Trigger: GTTAGTAAGACAAAACATCAACAAACAGATTGGGTG...TCTGCACTTTAGTGTAGATTGAGCACAGGCTCTCAATGCCACAGTGACACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR TCA 72 bp | GCTTTGCAGTCTTATGAGGTCTCATTTGTCAATTTTTaGTGTTACAGCATAAGCCACTGCTGTTCTGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: ALQSYEVSFVNF*CYSISHCCSVQ Trigger: CTGAACAGAACAGCAGTGGCTTATGCTGTAACATCAAAAATTGACAAATGAGACCTCATAAGACTGCAAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR TCA 72 bp | CATGCTCCCTACCATAATGATAATGGACTGAACCTCTaGAAGTATAAGCCAGCCAGGATTAATTGTTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: HAPYHNDNGLNL*KYKPARINCFL Trigger: TAGGAAACAATTAATCCTGGCTGGCTTATACTTTCAGAGGTTCAGTCCATTATCATTATGGTAGGGAGCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CCA 72 bp | GAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTaGAATCTCAGGGTTATTTTGATTTGCATTTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: EFLILAILTGVR*NLRVILICISL Trigger: CAGGGAAATGCAAATCAAAATAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGTGACCCCCAAAATTCCACTGGAGAACTCCTAAAGCTGATAAACAATTTCGTAACCCTGTGTGTCTaGGATCTCATTTTTCTATAC | + |
|
Preference number: 3 (lower is better) Translates to: ISDPQNSTGELLKLINNFVTLCV*DLIFLY Trigger: GTATAGAAAAATGAGATCCAAGACACACAGGGTTAC...GAAATTGTTTATCAGCTTTAGGAGTTCTCCAGTGGAATTTTGGGGGTCACTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR TCA 72 bp | AAGAGTCTCGAAGATATTTGCACAGGGGGAAAATCCTaGACAACAGAAATGGTTTGTGCTATAAGATTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KSLEDICTGGKS*TTEMVCAIRLR Trigger: TCTCAATCTTATAGCACAAACCATTTCTGTTGTTCAGGATTTTCCCCCTGTGCAAATATCTTCGAGACTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGTGACCCCCAAAATTCCACTGGAGAACTCCTAAAGCTGATAAACAATTTCTCAGTTGAGAATTCTTaGTTTAGCTCTGTCTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: ISDPQNSTGELLKLINNFSVENS*FSSVCT Trigger: AGTACAGACAGAGCTAAACAAAGAATTCTCAACTGA...GAAATTGTTTATCAGCTTTAGGAGTTCTCCAGTGGAATTTTGGGGGTCACTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR TCA 72 bp | ATCTGTTTGTTGATGTTTTGTCTTACTAACATACTTTaGCTAACAGAAGCTTTGCAGTCTTATGAGGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: ICLLMFCLTNIL*LTEALQSYEVS Trigger: TGAGACCTCATAAGACTGCAAAGCTTCTGTTAGTCAAAGTATGTTAGTAAGACAAAACATCAACAAACAGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CAA 72 bp | ATCTTATCTCTGGAACATAGATCCTCCTTGACAGCCTaGGGGGTCAGGCTGGGCTCAGGCGTAACTCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILSLEHRSSLTA*GVRLGSGVTHV Trigger: GACATGAGTTACGCCTGAGCCCAGCCTGACCCCCAAGGCTGTCAAGGAGGATCTATGTTCCAGAGATAAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CAA 72 bp | CCACATCCTCGCCAGCATCTGGTGTCACCTGAATTTTaGATCTTAGCCATTCTGACTGGTGTGAGGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PHPRQHLVSPEF*ILAILTGVRWN Trigger: ATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACACCAGATGCTGGCGAGGATGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS-3UTR CCA 90 bp | GAGCGAAGAAAAAGACCTGGAGAAAAGGACTTCTTCCACTGGTGTGAACTCCTGGGAGTGCATGGGCTATaGCATGCACAGCATTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: ERRKRPGEKDFFHWCELLGVHGL*HAQHCI Trigger: TATACAATGCTGTGCATGCCATAGCCCATGCACTCC...CAGGAGTTCACACCAGTGGAAGAAGTCCTTTTCTCCAGGTCTTTTTCTTCGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS-3UTR GCA 90 bp | GAATATGGGAGGGGTCGAGGGAGAATTATACAAATAACAAAGAAGTGGGCAACTTTTCAGGGCAGGGGCTaGAAACAAAACAGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EYGRGRGRIIQITKKWATFQGRG*KQNSRL Trigger: CAGCCTGCTGTTTTGTTTGCAGCCCCTGCCCTGAAA...AGTTGCCCACTTCTTTGTTATTTGTATAATTCTCCCTCGACCCCTCCCATATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS-3UTR GCA 90 bp | TTCCACTGGTGTGAACTCCTGTGCTATGTAGTTCTGACTGGTGGATTCAGGAGTGCATGGGCTATGGCATaGACAGCATTGTATATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FHWCELLCYVVLTGGFRSAWAMA*TALYML Trigger: TAACATATACAATGCTGTGCATGCCATAGCCCATGC...ACTCCTGAATCCACCAGTCAGAACTACATAGCACAGGAGTTCACACCAGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS-3UTR GCA 90 bp | GATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTATTTTGATTTGATTCACCTCATGGAGTaGATGGGCTATGGCATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DLSHSDWCEVESQGYFDLIHLME*MGYGMH Trigger: GTGCATGCCATAGCCCATGCACTCCATGAGGTGAAT...CAAATCAAAATAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS-3UTR TCA 90 bp | TTCCACTGGTGTGAACTCCTGTGCTATGTAGTTCTGACTGGTGGATTCAGGAGTACAATAGGAGTGTCATaGTGCTTCACAAACACACAA | + |
|
Preference number: 4 (lower is better) Translates to: FHWCELLCYVVLTGGFRSTIGVS*CFTNTQ Trigger: TTGTGTGTTTGTGAAGCATCATGACACTCCTATTGT...ACTCCTGAATCCACCAGTCAGAACTACATAGCACAGGAGTTCACACCAGTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS-3UTR CCA 90 bp | GAATATGGGAGGGGTCGAGGGAGAATTATACAAATAACAAAGAAGTGGGCAACTTGCAAATTCACCTCATaGAGTGCATGGGCTATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EYGRGRGRIIQITKKWATCKFTS*SAWAMA Trigger: TGCCATAGCCCATGCACTCCATGAGGTGAATTTGCA...AGTTGCCCACTTCTTTGTTATTTGTATAATTCTCCCTCGACCCCTCCCATATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CAA 72 bp | TTCCTTAGGATAGCAAGGAAGAGTTTGTTGCCTTGTTaGAAAGTACACAGTGCCTCACTGAGGATTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FLRIARKSLLPC*KVHSASLRIED Trigger: GTCCTCAATCCTCAGTGAGGCACTGTGTACTTTCAAACAAGGCAACAAACTCTTCCTTGCTATCCTAAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CAA 72 bp | TGTAGAGGAGAAAGTAGAGAAGAGTCTCGAAGATATTaGCACAGGGGGAAAATCCTGAACAACAGAAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: CRGESREESRRY*HRGKILNNRNG Trigger: ACCATTTCTGTTGTTCAGGATTTTCCCCCTGTGCAAATATCTTCGAGACTCTTCTCTACTTTCTCCTCTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CAA 72 bp | TTAATCCCCATATTCCTTAGGATAGCAAGGAAGAGTTaGTTGCCTTGTTTGAAAGTACACAGTGCCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LIPIFLRIARKS*LPCLKVHSASL Trigger: CAGTGAGGCACTGTGTACTTTCAAACAAGGCAACAAACTCTTCCTTGCTATCCTAAGGAATATGGGGATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS-3UTR CCA 90 bp | AAATGTGTCACTGTGGCATTGAGAGCCTGTGCTCAATCTACACTAAAGTGCAGACTAACTTTGATCTTTTaGGTAGAATTTCTCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KCVTVALRACAQSTLKCRLTLIF*VEFLSG Trigger: ACCAGAGAGAAATTCTACCCAAAAGATCAAAGTTAG...TCTGCACTTTAGTGTAGATTGAGCACAGGCTCTCAATGCCACAGTGACACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CAA 72 bp | ATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTATTTaGATTTGCATTTCCCTGGTGATTAAGGATGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILTGVRWNLRVI*ICISLVIKDVE Trigger: TTCAACATCCTTAATCACCAGGGAAATGCAAATCAAAATAACCCTGAGATTCCACCTCACACCAGTCAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| 3UTR CAA 72 bp | ATTTGGAGTCATGTAGTTGTTAGAATAGGTGTGGCTTaGTTGACAAAAATGTGTCACTGTGGCATTGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IWSHVVVRIGVA*LTKMCHCGIES Trigger: GCTCTCAATGCCACAGTGACACATTTTTGTCAACAAAGCCACACCTATTCTAACAACTACATGACTCCAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS GCA 90 bp | GTCAGGCAGATTCTTGGCCAAGAAAGCCAAAGTGAAGCTTCCAAGTaGCAGGCAGGCCAAGTATCCAAGGACACAGTAGAATGCAGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: VRQILGQESQSEASK*QAGQVSKDTVECSN Trigger: GTTACTGCATTCTACTGTGTCCTTGGATACTTGGCCTGCCTGGCACTTGGAAGCTTCACTTTGGCTTTCTTGGCCAAGAATCTGCCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS-3UTR CAA 90 bp | GAATATGGGAGGGGTCGAGGGAGAATTATACAAATAACAAAGAAGTGGGCAACTCCTGGGTCTGTGACTTaGAAAGCTAGAACCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: EYGRGRGRIIQITKKWATPGSVT*KARTTV Trigger: CACTGTGGTTCTAGCTTTCAAAGTCACAGACCCAGG...AGTTGCCCACTTCTTTGTTATTTGTATAATTCTCCCTCGACCCCTCCCATATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS-3UTR CAA 90 bp | CCAGATGTGTCTGCCTCTGGCTATTCTCTCCCTCATATCTACAATAAACCTTTCGCAGTAACTGAGCCCTaGTTGCACACAATGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: PDVSASGYSLPHIYNKPFAVTEP*LHTMMM Trigger: CATCATCATTGTGTGCAACAAGGGCTCAGTTACTGC...GAAAGGTTTATTGTAGATATGAGGGAGAGAATAGCCAGAGGCAGACACATCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS CCA 90 bp | TACATTCCGCACTGCACACAGAGGATGGCATCTTTCTACTTCCTGTaGCAACCTCAAGCATGTCTACATATAAGTGAAAGTTTCGACCAT | + |
|
Preference number: 5 (lower is better) Translates to: YIPHCTQRMASFYFL*QPQACLHISESFDH Trigger: ATGGTCGAAACTTTCACTTATATGTAGACATGCTTGAGGTTGCCACAGGAAGTAGAAAGATGCCATCCTCTGTGTGCAGTGCGGAATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS-3UTR CAA 90 bp | TTCCACTGGTGTGAACTCCTGTGCTATGTAGTTCTGACTGGTGGATTCAGGAGTAGATCAGGATTCCTGTaGATTTCATCCATTGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FHWCELLCYVVLTGGFRSRSGFL*ISSIAK Trigger: CTTTGCAATGGATGAAATCAACAGGAATCCTGATCT...ACTCCTGAATCCACCAGTCAGAACTACATAGCACAGGAGTTCACACCAGTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS-3UTR CAA 90 bp | GAGCGAAGAAAAAGACCTGGAGAAAAGGACTTCTTCCACTGGTGTGAACTCCTGATAGATACACCCCAATaGGGTCCTGTAAGAAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: ERRKRPGEKDFFHWCELLIDTPQ*GPVRRN Trigger: ATTTCTTCTTACAGGACCCAATTGGGGTGTATCTAT...CAGGAGTTCACACCAGTGGAAGAAGTCCTTTTCTCCAGGTCTTTTTCTTCGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS TCA 90 bp | GCAGTAACTGAGCCCTTGTTGCACACAATGATGATGTGGCCATGCTaGGAGTGTTCATCAATATCAACAAATGGAGGAGAAACTTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: AVTEPLLHTMMMWPC*ECSSISTNGGETSI Trigger: GATAGAAGTTTCTCCTCCATTTGTTGATATTGATGAACACTCTCAGCATGGCCACATCATCATTGTGTGCAACAAGGGCTCAGTTACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS-3UTR CAA 90 bp | GAATATGGGAGGGGTCGAGGGAGAATTATACAAATAACAAAGAAGTGGGCAACTCTGGGATCAATAAAGTaGGCCATGAAAAGTGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: EYGRGRGRIIQITKKWATLGSIK*AMKSGM Trigger: CATTCCACTTTTCATGGCCAACTTTATTGATCCCAG...AGTTGCCCACTTCTTTGTTATTTGTATAATTCTCCCTCGACCCCTCCCATATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS-3UTR CAA 90 bp | CCAGATGTGTCTGCCTCTGGCTATTCTCTCCCTCATATCTACAATAAACCTTTCTCTAACTTTGATCTTTaGGGTAGAATTTCTCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PDVSASGYSLPHIYNKPFSNFDL*GRISLW Trigger: CCAGAGAGAAATTCTACCCAAAAGATCAAAGTTAGA...GAAAGGTTTATTGTAGATATGAGGGAGAGAATAGCCAGAGGCAGACACATCTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS-3UTR CAA 90 bp | ATAAGTGACCCCCAAAATTCCACTGGAGAACTCCTAAAGCTGATAAACAATTTCCTTTCCCATTGTCTATaGCCTGATTATCAACCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ISDPQNSTGELLKLINNFLSHCL*PDYQPA Trigger: AGCAGGTTGATAATCAGGCAATAGACAATGGGAAAG...GAAATTGTTTATCAGCTTTAGGAGTTCTCCAGTGGAATTTTGGGGGTCACTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS-3UTR CAA 90 bp | ATAAGTGACCCCCAAAATTCCACTGGAGAACTCCTAAAGCTGATAAACAATTTCGGTAGGGAAATTCCATaGTTTTGTGGTGATCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: ISDPQNSTGELLKLINNFGREIP*FCGDPY Trigger: ATATGGATCACCACAAAACAATGGAATTTCCCTACC...GAAATTGTTTATCAGCTTTAGGAGTTCTCCAGTGGAATTTTGGGGGTCACTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS TCA 90 bp | CCAGAAACTTATAGATACACCCCAATTGGGTCCTGTAAGAAGAAATaGACACATAGTCTCTTCATTACAGAAATAATTAGGGATAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PETYRYTPIGSCKKK*THSLFITEIIRDRA Trigger: AGCCCTATCCCTAATTATTTCTGTAATGAAGAGACTATGTGTTCATTTCTTCTTACAGGACCCAATTGGGGTGTATCTATAAGTTTCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS-3UTR CAA 90 bp | ATAAGTGACCCCCAAAATTCCACTGGAGAACTCCTAAAGCTGATAAACAATTTCGAGGCATCAGATGAATaGTTCTTCAGTATTTTACAC | + |
|
Preference number: 5 (lower is better) Translates to: ISDPQNSTGELLKLINNFEASDE*FFSILH Trigger: GTGTAAAATACTGAAGAACAATTCATCTGATGCCTC...GAAATTGTTTATCAGCTTTAGGAGTTCTCCAGTGGAATTTTGGGGGTCACTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS CAA 90 bp | CTCCCTGGGTCTGTGACTTTGAAAGCTAGAACCACAGTGACTGTTTaGGCCAGAACTGTGGAAACAGCCACAGTGAATACAATTCCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: LPGSVTLKARTTVTV*ARTVETATVNTIPN Trigger: ATTTGGAATTGTATTCACTGTGGCTGTTTCCACAGTTCTGGCCAAAACAGTCACTGTGGTTCTAGCTTTCAAAGTCACAGACCCAGGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS GCA 72 bp | CAAGCAGTGAGAACTGGCTCCTTTCCCATTGTCTATTaGCTGATTATCAACCTGCTGCAAATTCACCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: QAVRTGSFPIVY*LIINLLQIHLM Trigger: CATGAGGTGAATTTGCAGCAGGTTGATAATCAGGCAATAGACAATGGGAAAGGAGCCAGTTCTCACTGCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS CAA 72 bp | TGTGTCCTTTGGGGCCATCTGATAGAGATAGGGATATaGTTCATCATCACTGAAGATGGAACTGAAAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: CVLWGHLIEIGI*FIITEDGTERP Trigger: GGGCCTTTCAGTTCCATCTTCAGTGATGATGAACAATATCCCTATCTCTATCAGATGGCCCCAAAGGACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS CAA 90 bp | AGTTTACCTTCAAGCAGTGAGAACTGGCTCCTTTCCCATTGTCTATaGCCTGATTATCAACCTGCTGCAAATTCACCTCATGGAGTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SLPSSSENWLLSHCL*PDYQPAANSPHGVH Trigger: ATGCACTCCATGAGGTGAATTTGCAGCAGGTTGATAATCAGGCAATAGACAATGGGAAAGGAGCCAGTTCTCACTGCTTGAAGGTAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS TCA 72 bp | CATGATGCTTCACAAACACACAAAGTACCACAGCTGTaGATGCAGAGAAACAGAAGGCCATTAAGGCAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: HDASQTHKVPQL*MQRNRRPLRQV Trigger: CACTTGCCTTAATGGCCTTCTGTTTCTCTGCATTCACAGCTGTGGTACTTTGTGTGTTTGTGAAGCATCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS TCA 72 bp | GAGCCCTTGTTGCACACAATGATGATGTGGCCATGCTaGGAGTGTTCATCAATATCAACAAATGGAGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: EPLLHTMMMWPC*ECSSISTNGGE Trigger: TTCTCCTCCATTTGTTGATATTGATGAACACTCTCAGCATGGCCACATCATCATTGTGTGCAACAAGGGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS GCA 72 bp | CTGATTATCAACCTGCTGCAAATTCACCTCATGGAGTaGATGGGCTATGGCATGCACAGCATTGTATATGTT | + |
|
Preference number: 6 (lower is better) Translates to: LIINLLQIHLME*MGYGMHSIVYV Trigger: AACATATACAATGCTGTGCATGCCATAGCCCATGCACTCCATGAGGTGAATTTGCAGCAGGTTGATAATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS CAA 72 bp | TCAAGCAGTGAGAACTGGCTCCTTTCCCATTGTCTATaGCCTGATTATCAACCTGCTGCAAATTCACCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SSSENWLLSHCL*PDYQPAANSPH Trigger: ATGAGGTGAATTTGCAGCAGGTTGATAATCAGGCAATAGACAATGGGAAAGGAGCCAGTTCTCACTGCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS CAA 72 bp | TCTGTGACTTTGAAAGCTAGAACCACAGTGACTGTTTaGGCCAGAACTGTGGAAACAGCCACAGTGAATACA | + |
|
Preference number: 6 (lower is better) Translates to: SVTLKARTTVTV*ARTVETATVNT Trigger: TGTATTCACTGTGGCTGTTTCCACAGTTCTGGCCAAAACAGTCACTGTGGTTCTAGCTTTCAAAGTCACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS TCA 72 bp | GCATGGGCTATGGCATGCACAGCATTGTATATGTTATaGCTACTCTCACTAAAGGCCATGTCAAACTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AWAMACTALYML*LLSLKAMSNFC Trigger: ACAGAAGTTTGACATGGCCTTTAGTGAGAGTAGTCATAACATATACAATGCTGTGCATGCCATAGCCCATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS CAA 72 bp | ATCAAAGACATATTTGGTAAAAGATCAGGATTCCTGTaGATTTCATCCATTGCAAAGGCCAATGCCAAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: IKDIFGKRSGFL*ISSIAKANAKA Trigger: CGCTTTGGCATTGGCCTTTGCAATGGATGAAATCAACAGGAATCCTGATCTTTTACCAAATATGTCTTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS CAA 72 bp | ATTTCATCCATTGCAAAGGCCAATGCCAAAGCGTATTaGTGGTTTTTAGTCGTTTTTAGGAAATTCAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: ISSIAKANAKAY*WFLVVFRKFRV Trigger: GACTCTGAATTTCCTAAAAACGACTAAAAACCACAAATACGCTTTGGCATTGGCCTTTGCAATGGATGAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS CAA 90 bp | ATTCTGTTCTGTATTGGCATATTGGTATTCTGGACAATTCACACATaGATCCATATTTGTCTCATTAGAAATTTCATTTTCAGGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ILFCIGILVFWTIHT*IHICLIRNFIFRAG Trigger: CCCTGCCCTGAAAATGAAATTTCTAATGAGACAAATATGGATCAATGTGTGAATTGTCCAGAATACCAATATGCCAATACAGAACAGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS CAA 72 bp | AAATTTATTCTCCAAAAGCACCTGGGATCAATAAAGTaGGCCATGAAAAGTGGAATGTTAAGGAAGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KFILQKHLGSIK*AMKSGMLRKKK Trigger: CTTCTTCTTCCTTAACATTCCACTTTTCATGGCCAACTTTATTGATCCCAGGTGCTTTTGGAGAATAAATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||
| CDS CAA 72 bp | AAGTATTTCCACTCTGGCATTACTAGATATAAATCTTaGCTTCTGAGATGGAACCATGTCTGTACAAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: KYFHSGITRYKS*LLRWNHVCTKS Trigger: AGATTTTGTACAGACATGGTTCCATCTCAGAAGCAAAGATTTATATCTAGTAATGCCAGAGTGGAAATACTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075108.9 |
||