Pregenerated sensors for VMN2R30 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070847Ensembl transcript IDs: ENSMUST00000072475.9, ENSMUST00000174368.9
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCAGGCAGGCCAAATATCCCAGGATACAGTAGAATGCAGTATCTaGGCCCTTGTTGCACACAATGATGATATGGCCATGGAGAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: CQAGQISQDTVECSI*ALVAHNDDMAMESV Trigger: CACACTCTCCATGGCCATATCATCATTGTGTGCAACAAGGGCTCAGATACTGCATTCTACTGTATCCTGGGATATTTGGCCTGCCTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR CCA 90 bp | AATGCAGTATCTGAGCCCTTGTTGCACACAATGATGATATGGCCATaGAGAGTGTGTTCATCAATATCAACAAAGGGAGGAGAAACTGCT | + |
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Preference number: 1 (lower is better) Translates to: NAVSEPLLHTMMIWP*RVCSSISTKGGETA Trigger: AGCAGTTTCTCCTCCCTTTGTTGATATTGATGAACACACTCTCCATGGCCATATCATCATTGTGTGCAACAAGGGCTCAGATACTGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR TCA 90 bp | GTTGGCATATTGGTATTCTGGACAATTCACACATTGATCCATATCTaGTTTCCAAAGGAAAGCTTAGTTAGGTCTGCTTCAGAAATTTTA | + |
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Preference number: 1 (lower is better) Translates to: VGILVFWTIHTLIHI*FPKESLVRSASEIL Trigger: TAAAATTTCTGAAGCAGACCTAACTAAGCTTTCCTTTGGAAATCAGATATGGATCAATGTGTGAATTGTCCAGAATACCAATATGCCAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR-3UTR GCA 90 bp | TCCTCATCTAACAACTCCTCCCCCATCTCCAAGATGATATCCCTACCTCCCCAATCCCTACCTCCCCAATaGCCAGCCCTTCCCAATCCC | + |
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Preference number: 2 (lower is better) Translates to: SSSNNSSPISKMISLPPQSLPPQ*PALPNP Trigger: GGGATTGGGAAGGGCTGGGCATTGGGGAGGTAGGGA...TTGGGGAGGTAGGGATATCATCTTGGAGATGGGGGAGGAGTTGTTAGATGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAGATGGGATACTCTACCATCATTGAGAGGAGAGGCCCTTGATCTTGTGAAGTGGTGTGTGGGCAGGTaGGAGGGGAACCGATCTCTG | + |
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Preference number: 2 (lower is better) Translates to: RRWDTLPSLRGEALDLVKWCVGR*EGNRSL Trigger: CAGAGATCGGTTCCCCTCTCACCTGCCCACACACCA...CTTCACAAGATCAAGGGCCTCTCCTCTCAATGATGGTAGAGTATCCCATCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR-3UTR CCA 90 bp | TTTCTCAATCTTCTCCCTGGGTCTGTGACTTTGAAAGCCAGAACCACAGTGACTGGGGTTTGTGGTGTGTaGGCAGGTGAGAGGGGAACC | + |
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Preference number: 2 (lower is better) Translates to: FLNLLPGSVTLKARTTVTGVCGV*AGERGT Trigger: GGTTCCCCTCTCACCTGCCCACACACCACAAACCCC...AGTCACTGTGGTTCTGGCTTTCAAAGTCACAGACCCAGGGAGAAGATTGAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR-3UTR TCA 90 bp | TGTAGCAGAAGATGGGATACTCTACCATCATTGAGAGGAGAGGCCCTTGATCTTTGGGGAGCAGGGTGGTaGGAGTTTATAGGGGATGGT | + |
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Preference number: 2 (lower is better) Translates to: CSRRWDTLPSLRGEALDLWGAGW*EFIGDG Trigger: ACCATCCCCTATAAACTCTCACCACCCTGCTCCCCA...AAGATCAAGGGCCTCTCCTCTCAATGATGGTAGAGTATCCCATCTTCTGCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAGATGGGATACTCTACCATCATTGAGAGGAGAGGCCCTTGATCTTGTGAAGCCCCCATCTCCAAGATaGTATCCCTACCTCCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: RRWDTLPSLRGEALDLVKPPSPR*YPYLPN Trigger: ATTGGGGAGGTAGGGATATCATCTTGGAGATGGGGG...CTTCACAAGATCAAGGGCCTCTCCTCTCAATGATGGTAGAGTATCCCATCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| 3UTR-3UTR TCA 90 bp | TGTAGCAGAAGATGGGATACTCTACCATCATTGAGAGGAGAGGCCCTTGATCTTCCCCCATCTCCAAGATaGTATCCCTACCTCCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: CSRRWDTLPSLRGEALDLPPSPR*YPYLPN Trigger: ATTGGGGAGGTAGGGATATCATCTTGGAGATGGGGG...AAGATCAAGGGCCTCTCCTCTCAATGATGGTAGAGTATCCCATCTTCTGCTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| 3UTR-3UTR TCA 90 bp | AAGATTATATGCCCCTGTAGAGGGGAATGCCAGGGTCTGGAAGCAGGAGTGGGTACAGAGGGAAATCTCTaGAAGAAATTAGGTTCATGC | + |
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Preference number: 2 (lower is better) Translates to: KIICPCRGECQGLEAGVGTEGNL*KKLGSC Trigger: GCATGAACCTAATTTCTTTCAGAGATTTCCCTCTGT...ACCCACTCCTGCTTCCAGACCCTGGCATTCCCCTCTACAGGGGCATATAATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| 3UTR-3UTR CCA 90 bp | TCCTCATCTAACAACTCCTCCCCCATCTCCAAGATGATATCCCTACCTCCCCAATGTTCTGTTCTGTGTTaGCATATTGGTATTCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: SSSNNSSPISKMISLPPQCSVLC*HIGILD Trigger: GTCCAGAATACCAATATGCCAACACAGAACAGAACA...TTGGGGAGGTAGGGATATCATCTTGGAGATGGGGGAGGAGTTGTTAGATGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAGATGGGATACTCTACCATCATTGAGAGGAGAGGCCCTTGATCTTGTGAAGTCTCAATCTTCTCCCTaGGTCTGTGACTTTGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: RRWDTLPSLRGEALDLVKSQSSP*VCDFES Trigger: GCTTTCAAAGTCACAGACCCAGGGAGAAGATTGAGA...CTTCACAAGATCAAGGGCCTCTCCTCTCAATGATGGTAGAGTATCCCATCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR-3UTR CCA 90 bp | TCCTCATCTAACAACTCCTCCCCCATCTCCAAGATGATATCCCTACCTCCCCAAGGCATATTGGTATTCTaGACAATTCACACATTGATC | + |
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Preference number: 2 (lower is better) Translates to: SSSNNSSPISKMISLPPQGILVF*TIHTLI Trigger: GATCAATGTGTGAATTGTCCAGAATACCAATATGCC...TTGGGGAGGTAGGGATATCATCTTGGAGATGGGGGAGGAGTTGTTAGATGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR-3UTR TCA 90 bp | TGTAGCAGAAGATGGGATACTCTACCATCATTGAGAGGAGAGGCCCTTGATCTTGCTGTTGCCGAGCATTaGTTTCAATTCATAAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: CSRRWDTLPSLRGEALDLAVAEH*FQFIKF Trigger: GAACTTTATGAATTGAAATCAATGCTCGGCAACAGC...AAGATCAAGGGCCTCTCCTCTCAATGATGGTAGAGTATCCCATCTTCTGCTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR-3UTR GCA 90 bp | AGAAGATGGGATACTCTACCATCATTGAGAGGAGAGGCCCTTGATCTTGTGAAGTGTGAAGGATGCTGTTaGCGAGCATTGATTTCAATT | + |
|
Preference number: 2 (lower is better) Translates to: RRWDTLPSLRGEALDLVKCEGCC*RALISI Trigger: AATTGAAATCAATGCTCGGCAACAGCATCCTTCACA...CTTCACAAGATCAAGGGCCTCTCCTCTCAATGATGGTAGAGTATCCCATCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAGATGGGATACTCTACCATCATTGAGAGGAGAGGCCCTTGATCTTGTGAAGACAGATGGCTCTGTTTaGAAGGCCAATGAAGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: RRWDTLPSLRGEALDLVKTDGSV*KANEEK Trigger: TTTTTCTTCATTGGCCTTCCAAACAGAGCCATCTGT...CTTCACAAGATCAAGGGCCTCTCCTCTCAATGATGGTAGAGTATCCCATCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR-3UTR TCA 90 bp | GACACCTTTCTGAATACATTTGTTCTGTTCTGTGTTGGCATATTGGTATTCTGGAGGGGAACCGATCTCTaGGGACCAGCAAAAAGAATA | + |
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Preference number: 2 (lower is better) Translates to: DTFLNTFVLFCVGILVFWRGTDL*GPAKRI Trigger: TATTCTTTTTGCTGGTCCTCAGAGATCGGTTCCCCT...CCAGAATACCAATATGCCAACACAGAACAGAACAAATGTATTCAGAAAGGTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR-3UTR GCA 90 bp | GTTAGAGGCTCAATGTCTGAGAGATCTTGCTTGTCCAGGTTTGTTGAGAATGCTATTCCAAATGTGATTTaGTGTAAGACACAGATGGCT | + |
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Preference number: 2 (lower is better) Translates to: VRGSMSERSCLSRFVENAIPNVI*CKTQMA Trigger: AGCCATCTGTGTCTTACAGCAAATCACATTTGGAAT...AGCATTCTCAACAAACCTGGACAAGCAAGATCTCTCAGACATTGAGCCTCTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR-3UTR TCA 90 bp | CACAGAGGGAAATCTCTGAAAGAAATTAGGTTCATGCAAATGTCAGTAGTTTTAAGGCCCTTGATCTTGTaGAGATTATATGCCCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: HRGKSLKEIRFMQMSVVLRPLIL*RLYAPV Trigger: TACAGGGGCATATAATCTTCACAAGATCAAGGGCCT...TAAAACTACTGACATTTGCATGAACCTAATTTCTTTCAGAGATTTCCCTCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| 3UTR-3UTR CAA 90 bp | GGGCCCCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGGTCTGCACCTGGGTCTGTGACTTaGAAAGCCAGAACCACAGTG | + |
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Preference number: 3 (lower is better) Translates to: GPPMKELEKVPKELKGSAPGSVT*KARTTV Trigger: CACTGTGGTTCTGGCTTTCAAAGTCACAGACCCAGG...TGCAGACCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTTCATTGGGGGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR-3UTR CAA 90 bp | GGGCCCCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGGTCTGCAGCGGCAAACACTCAATaGTCTGAAAATGTCATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GPPMKELEKVPKELKGSAAANTQ*SENVIF Trigger: GAAAATGACATTTTCAGACAATTGAGTGTTTGCCGC...TGCAGACCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTTCATTGGGGGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| 3UTR-3UTR CAA 90 bp | AAGATTATATGCCCCTGTAGAGGGGAATGCCAGGGTCTGGAAGCAGGAGTGGGTTTTTTCCCTGATCTTTaGGGTAGAATTTCTCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: KIICPCRGECQGLEAGVGFFPDL*GRISLW Trigger: CCAGAGAGAAATTCTACCCAAAAGATCAGGGAAAAA...ACCCACTCCTGCTTCCAGACCCTGGCATTCCCCTCTACAGGGGCATATAATCTT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR-3UTR CAA 90 bp | TGTAGCAGAAGATGGGATACTCTACCATCATTGAGAGGAGAGGCCCTTGATCTTCTGAGGCTTCTGTTATaGGCCTTCACAATAGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: CSRRWDTLPSLRGEALDLLRLLL*AFTIGV Trigger: CACTCCTATTGTGAAGGCCAATAACAGAAGCCTCAG...AAGATCAAGGGCCTCTCCTCTCAATGATGGTAGAGTATCCCATCTTCTGCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR-3UTR CAA 90 bp | TGTAGCAGAAGATGGGATACTCTACCATCATTGAGAGGAGAGGCCCTTGATCTTCCTTATCAACATTTTTaGGCAGTTACCAGAGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: CSRRWDTLPSLRGEALDLPYQHF*AVTRGP Trigger: TGGCCCTCTGGTAACTGCCAAAAAATGTTGATAAGG...AAGATCAAGGGCCTCTCCTCTCAATGATGGTAGAGTATCCCATCTTCTGCTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| 3UTR-3UTR CAA 90 bp | GTGACTTTGAAAGCCAGAACCACAGTGACTGTTTTGGCCAGAACTGTGGAAACACCTTATCAACATTTTTaGGCAGTTACCAGAGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: VTLKARTTVTVLARTVETPYQHF*AVTRGP Trigger: TGGCCCTCTGGTAACTGCCAAAAAATGTTGATAAGG...TGTTTCCACAGTTCTGGCCAAAACAGTCACTGTGGTTCTGGCTTTCAAAGTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR-3UTR CAA 90 bp | TCCTCATCTAACAACTCCTCCCCCATCTCCAAGATGATATCCCTACCTCCCCAATTGTTCTGTTCTGTGTaGGCATATTGGTATTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: SSSNNSSPISKMISLPPQLFCSV*AYWYSG Trigger: TCCAGAATACCAATATGCCAACACAGAACAGAACAA...TTGGGGAGGTAGGGATATCATCTTGGAGATGGGGGAGGAGTTGTTAGATGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR-3UTR CAA 90 bp | TGTAGCAGAAGATGGGATACTCTACCATCATTGAGAGGAGAGGCCCTTGATCTTGCAGTATCTGAGCCCTaGTTGCACACAATGATGATA | + |
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Preference number: 3 (lower is better) Translates to: CSRRWDTLPSLRGEALDLAVSEP*LHTMMI Trigger: TATCATCATTGTGTGCAACAAGGGCTCAGATACTGC...AAGATCAAGGGCCTCTCCTCTCAATGATGGTAGAGTATCCCATCTTCTGCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR TCA 72 bp | AAGCATCTGGCTCTCATTCTGTTTTCCAGAATTTTCTaGGTCCAGGACCTCAATCAGAACTGCACACAGAGG | + |
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Preference number: 3 (lower is better) Translates to: KHLALILFSRIF*VQDLNQNCTQR Trigger: CCTCTGTGTGCAGTTCTGATTGAGGTCCTGGACTCAGAAAATTCTGGAAAACAGAATGAGAGCCAGATGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| 3UTR TCA 72 bp | GTGCCATCCCCAAGGGGTCTTCATAGCTTAGGAAGGTaGCACCTTTCTGAATACATTTGTTCTGTTCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: VPSPRGLHSLGR*HLSEYICSVLC Trigger: ACACAGAACAGAACAAATGTATTCAGAAAGGTGTCACCTTCCTAAGCTATGAAGACCCCTTGGGGATGGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR TCA 72 bp | GGCCAAATATCCCAGGATACAGTAGAATGCAGTATCTaGGCCCTTGTTGCACACAATGATGATATGGCCATG | + |
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Preference number: 3 (lower is better) Translates to: GQISQDTVECSI*ALVAHNDDMAM Trigger: CATGGCCATATCATCATTGTGTGCAACAAGGGCTCAGATACTGCATTCTACTGTATCCTGGGATATTTGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR CCA 72 bp | TCTGAGCCCTTGTTGCACACAATGATGATATGGCCATaGAGAGTGTGTTCATCAATATCAACAAAGGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: SEPLLHTMMIWP*RVCSSISTKGG Trigger: TCCTCCCTTTGTTGATATTGATGAACACACTCTCCATGGCCATATCATCATTGTGTGCAACAAGGGCTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR-3UTR CAA 90 bp | AGAAGATGGGATACTCTACCATCATTGAGAGGAGAGGCCCTTGATCTTGTGAAGGCGGCAAACACTCAATaGTCTGAAAATGTCATTTTC | + |
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Preference number: 3 (lower is better) Translates to: RRWDTLPSLRGEALDLVKAANTQ*SENVIF Trigger: GAAAATGACATTTTCAGACAATTGAGTGTTTGCCGC...CTTCACAAGATCAAGGGCCTCTCCTCTCAATGATGGTAGAGTATCCCATCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| 3UTR GCA 72 bp | GAACTAACCAGTATTCCCAGAGCTCATGTGTTTAGCTaGATATGTAGCAGAAGATGGGATACTCTACCATCA | + |
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Preference number: 3 (lower is better) Translates to: ELTSIPRAHVFS*ICSRRWDTLPS Trigger: TGATGGTAGAGTATCCCATCTTCTGCTACATATGCAGCTAAACACATGAGCTCTGGGAATACTGGTTAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| 3UTR GCA 72 bp | CTTCTGTTATTGGCCTTCACAATAGGAGTGTCATGGTaGTTCACAAAGACACAAAGTACCACAGCTGTGAAT | + |
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Preference number: 3 (lower is better) Translates to: LLLLAFTIGVSW*FTKTQSTTAVN Trigger: ATTCACAGCTGTGGTACTTTGTGTCTTTGTGAAGCACCATGACACTCCTATTGTGAAGGCCAATAACAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR CCA 72 bp | GCAGTATCTGAGCCCTTGTTGCACACAATGATGATATaGCCATGGAGAGTGTGTTCATCAATATCAACAAAG | + |
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Preference number: 3 (lower is better) Translates to: AVSEPLLHTMMI*PWRVCSSISTK Trigger: CTTTGTTGATATTGATGAACACACTCTCCATGGCCATATCATCATTGTGTGCAACAAGGGCTCAGATACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR-3UTR CAA 90 bp | CATGCAAATGTCAGTAGTTTTACCTATCCCTTCCATAACTACAATATGAATAGCAAACTGCTAGCCAGATaGCACACAGAACACATTGGA | + |
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Preference number: 3 (lower is better) Translates to: HANVSSFTYPFHNYNMNSKLLAR*HTEHIG Trigger: TCCAATGTGTTCTGTGTGCAATCTGGCTAGCAGTTT...GCTATTCATATTGTAGTTATGGAAGGGATAGGTAAAACTACTGACATTTGCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR-3UTR CAA 90 bp | CACAGAGGGAAATCTCTGAAAGAAATTAGGTTCATGCAAATGTCAGTAGTTTTATTCTGTGTTGGCATATaGGTATTCTGGACAATTCAC | + |
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Preference number: 3 (lower is better) Translates to: HRGKSLKEIRFMQMSVVLFCVGI*VFWTIH Trigger: GTGAATTGTCCAGAATACCAATATGCCAACACAGAA...TAAAACTACTGACATTTGCATGAACCTAATTTCTTTCAGAGATTTCCCTCTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| CDS-3UTR GCA 90 bp | AAGATTATATGCCCCTGTAGAGGGGAATGCCAGGGTCTGGAAGCAGGAGTGGGTAGTGGGTGTCTGAACTaGTGCCAGGATGAAAGTACA | + |
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Preference number: 4 (lower is better) Translates to: KIICPCRGECQGLEAGVGSGCLN*CQDEST Trigger: TGTACTTTCATCCTGGCAGCAGTTCAGACACCCACT...ACCCACTCCTGCTTCCAGACCCTGGCATTCCCCTCTACAGGGGCATATAATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| 3UTR CAA 72 bp | GAGGCTCAATGTCTGAGAGATCTTGCTTGTCCAGGTTaGTTGAGAATGCTGGTCACCCTCCTCCTCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: EAQCLRDLACPG*LRMLVTLLLSF Trigger: GAAGCTGAGGAGGAGGGTGACCAGCATTCTCAACAAACCTGGACAAGCAAGATCTCTCAGACATTGAGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| 3UTR CAA 72 bp | GCTCAATGTCTGAGAGATCTTGCTTGTCCAGGTTTGTaGAGAATGCTGGTCACCCTCCTCCTCAGCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: AQCLRDLACPGL*RMLVTLLLSFF Trigger: GAAGAAGCTGAGGAGGAGGGTGACCAGCATTCTCAACAAACCTGGACAAGCAAGATCTCTCAGACATTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| 3UTR CAA 72 bp | TCTCTGGTTAGAGGCTCAATGTCTGAGAGATCTTGCTaGTCCAGGTTTGTTGAGAATGCTGGTCACCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SLVRGSMSERSC*SRFVENAGHPP Trigger: AGGAGGGTGACCAGCATTCTCAACAAACCTGGACAAGCAAGATCTCTCAGACATTGAGCCTCTAACCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS-3UTR TCA 90 bp | GTGACTTTGAAAGCCAGAACCACAGTGACTGTTTTGGCCAGAACTGTGGAAACACCATTGCCTATTGCCTaGTTATCAGCCTGTTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: VTLKARTTVTVLARTVETPLPIA*LSACCR Trigger: TCTGCAACAGGCTGATAATCAGGCAATAGGCAATGG...TGTTTCCACAGTTCTGGCCAAAACAGTCACTGTGGTTCTGGCTTTCAAAGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR CAA 72 bp | AGGAAGTTTCTCAATCTTCTCCCTGGGTCTGTGACTTaGAAAGCCAGAACCACAGTGACTGTTTTGGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: RKFLNLLPGSVT*KARTTVTVLAR Trigger: TCTGGCCAAAACAGTCACTGTGGTTCTGGCTTTCAAAGTCACAGACCCAGGGAGAAGATTGAGAAACTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| CDS-3UTR TCA 90 bp | CCTCCTCAGCTTCTTCCCAATATTCCCAATTCATCCAGAGAGTCCCTGGGCTTCATAAATCTGTGTTTCTaGCATGGAACCATGTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: PPQLLPNIPNSSRESLGFINLCF*HGTMSV Trigger: TACAGACATGGTTCCATGTCAGAAACACAGATTTAT...GAAGCCCAGGGACTCTCTGGATGAATTGGGAATATTGGGAAGAAGCTGAGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS-3UTR CCA 90 bp | TCCTCATCTAACAACTCCTCCCCCATCTCCAAGATGATATCCCTACCTCCCCAAAGAAATTTCATTTTCTaGGCAGGGGCTGCAAACAAA | + |
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Preference number: 4 (lower is better) Translates to: SSSNNSSPISKMISLPPQRNFIF*AGAANK Trigger: TTTGTTTGCAGCCCCTGCCCAGAAAATGAAATTTCT...TTGGGGAGGTAGGGATATCATCTTGGAGATGGGGGAGGAGTTGTTAGATGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS-3UTR CCA 90 bp | TCCTCATCTAACAACTCCTCCCCCATCTCCAAGATGATATCCCTACCTCCCCAAAATGCAAGGATGAAATaGAGAGGAGCTTGTCTCATT | + |
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Preference number: 4 (lower is better) Translates to: SSSNNSSPISKMISLPPQNARMK*RGACLI Trigger: AATGAGACAAGCTCCTCTCCATTTCATCCTTGCATT...TTGGGGAGGTAGGGATATCATCTTGGAGATGGGGGAGGAGTTGTTAGATGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| 3UTR CAA 72 bp | TCTGTGACTTTGAAAGCCAGAACCACAGTGACTGTTTaGGCCAGAACTGTGGAAACAGCCACAGTGAATACA | + |
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Preference number: 4 (lower is better) Translates to: SVTLKARTTVTV*ARTVETATVNT Trigger: TGTATTCACTGTGGCTGTTTCCACAGTTCTGGCCAAAACAGTCACTGTGGTTCTGGCTTTCAAAGTCACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| CDS-3UTR GCA 90 bp | GTTAGAGGCTCAATGTCTGAGAGATCTTGCTTGTCCAGGTTTGTTGAGAATGCTTTGTTCCTGTCTGAATaGAAGGATGAAATGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: VRGSMSERSCLSRFVENALFLSE*KDEMER Trigger: CCTCTCCATTTCATCCTTGCATTCAGACAGGAACAA...AGCATTCTCAACAAACCTGGACAAGCAAGATCTCTCAGACATTGAGCCTCTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| CDS-3UTR CCA 90 bp | GTTAGAGGCTCAATGTCTGAGAGATCTTGCTTGTCCAGGTTTGTTGAGAATGCTCACACAATGATGATATaGCCATGGAGAGTGTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: VRGSMSERSCLSRFVENAHTMMI*PWRVCS Trigger: TGAACACACTCTCCATGGCCATATCATCATTGTGTG...AGCATTCTCAACAAACCTGGACAAGCAAGATCTCTCAGACATTGAGCCTCTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072475.9 |
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| 3UTR CAA 72 bp | TGCATATGTAGCAGAAGATGGGATACTCTACCATCATaGAGAGGAGAGGCCCTTGATCTTGTGAAGATTATA | + |
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Preference number: 4 (lower is better) Translates to: CICSRRWDTLPS*RGEALDLVKII Trigger: TATAATCTTCACAAGATCAAGGGCCTCTCCTCTCAATGATGGTAGAGTATCCCATCTTCTGCTACATATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS-3UTR TCA 90 bp | TCTCTGAAAGAAATTAGGTTCATGCAAATGTCAGTAGTTTTACCTATCCCTTCCCCATTGCCTATTGCCTaGTTATCAGCCTGTTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SLKEIRFMQMSVVLPIPSPLPIA*LSACCR Trigger: TCTGCAACAGGCTGATAATCAGGCAATAGGCAATGG...GGAAGGGATAGGTAAAACTACTGACATTTGCATGAACCTAATTTCTTTCAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS-3UTR CCA 90 bp | GTTAGAGGCTCAATGTCTGAGAGATCTTGCTTGTCCAGGTTTGTTGAGAATGCTGGCATATTGGTATTCTaGACAATTCACACATTGATC | + |
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Preference number: 4 (lower is better) Translates to: VRGSMSERSCLSRFVENAGILVF*TIHTLI Trigger: GATCAATGTGTGAATTGTCCAGAATACCAATATGCC...AGCATTCTCAACAAACCTGGACAAGCAAGATCTCTCAGACATTGAGCCTCTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072475.9 |
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| CDS-3UTR GCA 90 bp | CATGCAAATGTCAGTAGTTTTACCTATCCCTTCCATAACTACAATATGAATAGCAGTGGGTGTCTGAACTaGTGCCAGGATGAAAGTACA | + |
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Preference number: 4 (lower is better) Translates to: HANVSSFTYPFHNYNMNSSGCLN*CQDEST Trigger: TGTACTTTCATCCTGGCAGCAGTTCAGACACCCACT...GCTATTCATATTGTAGTTATGGAAGGGATAGGTAAAACTACTGACATTTGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS-3UTR CCA 90 bp | TGTCTTCCTAGATCTCATTTTTCTACACAAAGTGGTGGATTCAACTGCCTTATCAGAAATTTCATTTTCTaGGCAGGGGCTGCAAACAAA | + |
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Preference number: 4 (lower is better) Translates to: CLPRSHFSTQSGGFNCLIRNFIF*AGAANK Trigger: TTTGTTTGCAGCCCCTGCCCAGAAAATGAAATTTCT...GATAAGGCAGTTGAATCCACCACTTTGTGTAGAAAAATGAGATCTAGGAAGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS-3UTR TCA 90 bp | CATGCAAATGTCAGTAGTTTTACCTATCCCTTCCATAACTACAATATGAATAGCATAAATCTGTGTTTCTaGCATGGAACCATGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HANVSSFTYPFHNYNMNSINLCF*HGTMSV Trigger: TACAGACATGGTTCCATGTCAGAAACACAGATTTAT...GCTATTCATATTGTAGTTATGGAAGGGATAGGTAAAACTACTGACATTTGCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| 3UTR CAA 72 bp | AATCCATTAAACGGGAGTTTGAATATCAAATCTTTCTaGAAACAATGCCATCTTCCACGAATTTTCAACGAG | + |
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Preference number: 4 (lower is better) Translates to: NPLNGSLNIKSF*KQCHLPRIFNE Trigger: CTCGTTGAAAATTCGTGGAAGATGGCATTGTTTCAAGAAAGATTTGATATTCAAACTCCCGTTTAATGGATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| 3UTR CAA 72 bp | TTTCTGAATACATTTGTTCTGTTCTGTGTTGGCATATaGGTATTCTGGACAATTCACACATTGATCCATATC | + |
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Preference number: 4 (lower is better) Translates to: FLNTFVLFCVGI*VFWTIHTLIHI Trigger: GATATGGATCAATGTGTGAATTGTCCAGAATACCAATATGCCAACACAGAACAGAACAAATGTATTCAGAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174368.9 |
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| CDS-3UTR CAA 90 bp | GGGCCCCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGGTCTGCAGTATCTGAGCCCTTGTaGCACACAATGATGATATGG | + |
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Preference number: 5 (lower is better) Translates to: GPPMKELEKVPKELKGSAVSEPL*HTMMIW Trigger: CCATATCATCATTGTGTGCAACAAGGGCTCAGATAC...TGCAGACCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTTCATTGGGGGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072475.9 |
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| CDS TCA 90 bp | TGCAAACAAAACAGCAGGCTGCCATTCCCTCCTTCCACAATCTTCTaGATCCAGGACTACAATCTGCACTGCACACAGAGGATGGCATCT | + |
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Preference number: 5 (lower is better) Translates to: CKQNSRLPFPPSTIF*IQDYNLHCTQRMAS Trigger: AGATGCCATCCTCTGTGTGCAGTGCAGATTGTAGTCCTGGATTCAGAAGATTGTGGAAGGAGGGAATGGCAGCCTGCTGTTTTGTTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS CCA 90 bp | TACAATCTGCACTGCACACAGAGGATGGCATCTTTCTTCTTCCTGTaGCCAACTCAATCATGTCTACATATAAGTGAGAGTGTCGACCAT | + |
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Preference number: 5 (lower is better) Translates to: YNLHCTQRMASFFFL*PTQSCLHISESVDH Trigger: ATGGTCGACACTCTCACTTATATGTAGACATGATTGAGTTGGCCACAGGAAGAAGAAAGATGCCATCCTCTGTGTGCAGTGCAGATTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS-3UTR CAA 90 bp | TGTAGCAGAAGATGGGATACTCTACCATCATTGAGAGGAGAGGCCCTTGATCTTCTTTTCCATTGCCTATaGCCTGATTATCAGCCTGTT | + |
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Preference number: 5 (lower is better) Translates to: CSRRWDTLPSLRGEALDLLFHCL*PDYQPV Trigger: AACAGGCTGATAATCAGGCAATAGGCAATGGAAAAG...AAGATCAAGGGCCTCTCCTCTCAATGATGGTAGAGTATCCCATCTTCTGCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS-3UTR CAA 90 bp | TGTCTTCCTAGATCTCATTTTTCTACACAAAGTGGTGGATTCAACTGCCTTATCGCAGTATCTGAGCCCTaGTTGCACACAATGATGATA | + |
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Preference number: 5 (lower is better) Translates to: CLPRSHFSTQSGGFNCLIAVSEP*LHTMMI Trigger: TATCATCATTGTGTGCAACAAGGGCTCAGATACTGC...GATAAGGCAGTTGAATCCACCACTTTGTGTAGAAAAATGAGATCTAGGAAGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072475.9 |
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| CDS-3UTR CAA 90 bp | TGTCTTCCTAGATCTCATTTTTCTACACAAAGTGGTGGATTCAACTGCCTTATCCTTTTCCATTGCCTATaGCCTGATTATCAGCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CLPRSHFSTQSGGFNCLILFHCL*PDYQPV Trigger: AACAGGCTGATAATCAGGCAATAGGCAATGGAAAAG...GATAAGGCAGTTGAATCCACCACTTTGTGTAGAAAAATGAGATCTAGGAAGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS TCA 90 bp | TTCTGTTCTGTGTTGGCATATTGGTATTCTGGACAATTCACACATTaGTCCATATTTGTCTCATTAGAAATTTCATTTTCTGGGCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: FCSVLAYWYSGQFTH*SIFVSLEISFSGQG Trigger: CCCCTGCCCAGAAAATGAAATTTCTAATGAGACAAATATGGATCAATGTGTGAATTGTCCAGAATACCAATATGCCAACACAGAACAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072475.9 |
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| CDS CAA 72 bp | TCCTTTTCCATTGCCTATTGCCTGATTATCAGCCTGTaGCAGATTCATCTCATGGAGGGCATGGGCTATGGC | + |
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Preference number: 6 (lower is better) Translates to: SFSIAYCLIISL*QIHLMEGMGYG Trigger: GCCATAGCCCATGCCCTCCATGAGATGAATCTGCAACAGGCTGATAATCAGGCAATAGGCAATGGAAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS GCA 72 bp | CTCCTTCCACAATCTTCTGAATCCAGGACTACAATCTaGACTGCACACAGAGGATGGCATCTTTCTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LLPQSSESRTTI*TAHRGWHLSSS Trigger: GGAAGAAGAAAGATGCCATCCTCTGTGTGCAGTGCAGATTGTAGTCCTGGATTCAGAAGATTGTGGAAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS GCA 72 bp | TTACCTTCAAGCAGTGAGAACTGGCTCCTTTTCCATTaGCTATTGCCTGATTATCAGCCTGTTGCAGATTCA | + |
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Preference number: 6 (lower is better) Translates to: LPSSSENWLLFH*LLPDYQPVADS Trigger: TGAATCTGCAACAGGCTGATAATCAGGCAATAGGCAATGGAAAAGGAGCCAGTTCTCACTGCTTGAAGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS CCA 72 bp | TTCTTAGAAAGGAGTTTACCTTCAAGCAGTGAGAACTaGCTCCTTTTCCATTGCCTATTGCCTGATTATCAG | + |
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Preference number: 6 (lower is better) Translates to: FLERSLPSSSEN*LLFHCLLPDYQ Trigger: CTGATAATCAGGCAATAGGCAATGGAAAAGGAGCCAGTTCTCACTGCTTGAAGGTAAACTCCTTTCTAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS CAA 72 bp | TCCAGGTACATCCAGAAACTTAAAGATACATCCCACTaGGGTCCTGAAAGCAGAAATGAACACATAGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SRYIQKLKDTSH*GPESRNEHIVS Trigger: AGAGACTATGTGTTCATTTCTGCTTTCAGGACCCAAGTGGGATGTATCTTTAAGTTTCTGGATGTACCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS CAA 90 bp | AAGAAGCTGTCCAGGTACATCCAGAAACTTAAAGATACATCCCACTaGGGTCCTGAAAGCAGAAATGAACACATAGTCTCTTCATTACAG | + |
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Preference number: 6 (lower is better) Translates to: KKLSRYIQKLKDTSH*GPESRNEHIVSSLQ Trigger: CTGTAATGAAGAGACTATGTGTTCATTTCTGCTTTCAGGACCCAAGTGGGATGTATCTTTAAGTTTCTGGATGTACCTGGACAGCTTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS TCA 72 bp | AATCTTTTTCAGTGGGTGTCTGAACTGCTGCCAGGATaGAAGTACAAGATAATCCCAAATATTCATCCGTTA | + |
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Preference number: 6 (lower is better) Translates to: NLFQWVSELLPG*KYKIIPNIHPL Trigger: TAACGGATGAATATTTGGGATTATCTTGTACTTTCATCCTGGCAGCAGTTCAGACACCCACTGAAAAAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS CAA 90 bp | GTTCTGTTCTGTGTTGGCATATTGGTATTCTGGACAATTCACACATaGATCCATATTTGTCTCATTAGAAATTTCATTTTCTGGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VLFCVGILVFWTIHT*IHICLIRNFIFWAG Trigger: CCCTGCCCAGAAAATGAAATTTCTAATGAGACAAATATGGATCAATGTGTGAATTGTCCAGAATACCAATATGCCAACACAGAACAGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072475.9 |
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| CDS TCA 72 bp | CTAAAAGAAATTGGTTTCCTTGATCGTCATCTGGGATaGCAAGGCCAATCCAGTTCCATTTCAAATAAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: LKEIGFLDRHLG*QGQSSSISNKV Trigger: TACTTTATTTGAAATGGAACTGGATTGGCCTTGTCATCCCAGATGACGATCAAGGAAACCAATTTCTTTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS CAA 90 bp | ATTTCATCCAAATTTATTCTCCAAAAGCACCTGGGATTAATGAAATaGGCCATGAGAAGTGTAATATTAAGGAGGAAGAAGACTCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: ISSKFILQKHLGLMK*AMRSVILRRKKTPM Trigger: CATGGGAGTCTTCTTCCTCCTTAATATTACACTTCTCATGGCCAATTTCATTAATCCCAGGTGCTTTTGGAGAATAAATTTGGATGAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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| CDS CAA 72 bp | AAATTTATTCTCCAAAAGCACCTGGGATTAATGAAATaGGCCATGAGAAGTGTAATATTAAGGAGGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: KFILQKHLGLMK*AMRSVILRRKK Trigger: CTTCTTCCTCCTTAATATTACACTTCTCATGGCCAATTTCATTAATCCCAGGTGCTTTTGGAGAATAAATTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072475.9 ENSMUST00000174368.9 |
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