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Pregenerated sensors for VMN2R29 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095730

Ensembl transcript IDs: ENSMUST00000170922.2, ENSMUST00000211433.2

Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCAAACAAAACAGCAGGCTGCCATTCCCTCCTTCCACAATCTTCTaGATCCAGGACTACATTCCGCACTGCACACAGAGGATGGCATCT +
Preference number: 1 (lower is better)
Translates to: CKQNSRLPFPPSTIF*IQDYIPHCTQRMAS
Trigger: AGATGCCATCCTCTGTGTGCAGTGCGGAATGTAGTCCTGGATTCAGAAGATTGTGGAAGGAGGGAATGGCAGCCTGCTGTTTTGTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211433.2
3UTR CCA 90 bp TACATTCCGCACTGCACACAGAGGATGGCATCTTTCTACTTCCTGTaGCCACTTCAATCATGTCTACGTATAAGTGAAAGTGTCGACCAT +
Preference number: 1 (lower is better)
Translates to: YIPHCTQRMASFYFL*PLQSCLRISESVDH
Trigger: ATGGTCGACACTTTCACTTATACGTAGACATGATTGAAGTGGCCACAGGAAGTAGAAAGATGCCATCCTCTGTGTGCAGTGCGGAATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211433.2
3UTR-3UTR CCA 90 bp ACAGCAGGCTGCCATTCCCTCCTTCCACAATCTTCTGAATCCAGGACTACATTCTCTTTCTACTTCCTGTaGCCACTTCAATCATGTCTA +
Preference number: 2 (lower is better)
Translates to: TAGCHSLLPQSSESRTTFSFYFL*PLQSCL
Trigger: TAGACATGATTGAAGTGGCCACAGGAAGTAGAAAGA...GAATGTAGTCCTGGATTCAGAAGATTGTGGAAGGAGGGAATGGCAGCCTGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211433.2
3UTR-3UTR TCA 90 bp CACTGCACACAGAGGATGGCATCTTTCTACTTCCTGTGGCCACTTCAATCATGTGTGAAAAATATGGGCTaGACTTTCCTAACTTCAGCT +
Preference number: 2 (lower is better)
Translates to: HCTQRMASFYFLWPLQSCVKNMG*TFLTSA
Trigger: AGCTGAAGTTAGGAAAGTTCAGCCCATATTTTTCAC...ACATGATTGAAGTGGCCACAGGAAGTAGAAAGATGCCATCCTCTGTGTGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211433.2
3UTR-3UTR TCA 90 bp ACTGCACACAGAGGATGGCATCTTTCTACTTCCTGTGGCCACTTCAATCATGTCAAAGTGTCGACCATGTaGAAAATATGGGCTGAACTT +
Preference number: 2 (lower is better)
Translates to: TAHRGWHLSTSCGHFNHVKVSTM*KIWAEL
Trigger: AAGTTCAGCCCATATTTTTCACATGGTCGACACTTT...GACATGATTGAAGTGGCCACAGGAAGTAGAAAGATGCCATCCTCTGTGTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211433.2
3UTR CCA 72 bp GAATCCAGGACTACATTCCGCACTGCACACAGAGGATaGCATCTTTCTACTTCCTGTGGCCACTTCAATCAT +
Preference number: 3 (lower is better)
Translates to: ESRTTFRTAHRG*HLSTSCGHFNH
Trigger: ATGATTGAAGTGGCCACAGGAAGTAGAAAGATGCCATCCTCTGTGTGCAGTGCGGAATGTAGTCCTGGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211433.2
CDS-3UTR CCA 90 bp ACAGCAGGCTGCCATTCCCTCCTTCCACAATCTTCTGAATCCAGGACTACATTCAGGAGTGTACCATGGTaGGGTAGAAAAGTAAGTGAT +
Preference number: 4 (lower is better)
Translates to: TAGCHSLLPQSSESRTTFRSVPW*GRKVSD
Trigger: ATCACTTACTTTTCTACCCCACCATGGTACACTCCT...GAATGTAGTCCTGGATTCAGAAGATTGTGGAAGGAGGGAATGGCAGCCTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211433.2
CDS-3UTR TCA 90 bp CGACCATGTGAAAAATATGGGCTGAACTTTCCTAACTTCAGCTTAATCCCAAGAGAGGTTCCCACATTCTaGAGATCAAATCAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: RPCEKYGLNFPNFSLIPREVPTF*RSNQRN
Trigger: ATTTCTTTGATTTGATCTTCAGAATGTGGGAACCTC...TCTTGGGATTAAGCTGAAGTTAGGAAAGTTCAGCCCATATTTTTCACATGGTCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211433.2
CDS TCA 90 bp TGCCAGGCAGGCCAAGTATCCAAGGACACAGTAGAATGCAGTAACTaGGCCCTTGTTGCACACAATGATGATGTGGCCATGGAGAGTGTG +
Preference number: 5 (lower is better)
Translates to: CQAGQVSKDTVECSN*ALVAHNDDVAMESV
Trigger: CACACTCTCCATGGCCACATCATCATTGTGTGCAACAAGGGCTCAGTTACTGCATTCTACTGTGTCCTTGGATACTTGGCCTGCCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170922.2
CDS GCA 90 bp GTCAGGCAGATTCTTGGCCAAGAAAGCCAAAGTGAAGCTTCCCAGTaGCAGGCAGGCCAAGTATCCAAGGACACAGTAGAATGCAGTAAC +
Preference number: 5 (lower is better)
Translates to: VRQILGQESQSEASQ*QAGQVSKDTVECSN
Trigger: GTTACTGCATTCTACTGTGTCCTTGGATACTTGGCCTGCCTGGCACTGGGAAGCTTCACTTTGGCTTTCTTGGCCAAGAATCTGCCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170922.2
CDS TCA 90 bp TTAAGGCAAGTGCCATCCCCAAAGGGTCTTCATAGCTTAGGAAGGTaGCACCTTTCTGAATACATTTGTTCTGTTCTGTATTGGCATATT +
Preference number: 5 (lower is better)
Translates to: LRQVPSPKGLHSLGR*HLSEYICSVLYWHI
Trigger: AATATGCCAATACAGAACAGAACAAATGTATTCAGAAAGGTGTCACCTTCCTAAGCTATGAAGACCCTTTGGGGATGGCACTTGCCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170922.2
CDS CCA 90 bp AAAAAGCTGTCCAGGTACTTCCAGAAACTTAAAGATACCTCCCAATaGGTTCCTGTAAGCAGAAAGGAACACATAGTCTCTTCATTACAG +
Preference number: 5 (lower is better)
Translates to: KKLSRYFQKLKDTSQ*VPVSRKEHIVSSLQ
Trigger: CTGTAATGAAGAGACTATGTGTTCCTTTCTGCTTACAGGAACCCATTGGGAGGTATCTTTAAGTTTCTGGAAGTACCTGGACAGCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000170922.2
CDS TCA 90 bp TTCTGTTCTGTATTGGCATATTGGTATTCTGGACAATTCACACATTaGTCCATATTTGTCTCATTAGAAATTTCATTTTCAGGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: FCSVLAYWYSGQFTH*SIFVSLEISFSGQG
Trigger: CCCCTGCCCTGAAAATGAAATTTCTAATGAGACAAATATGGATCAATGTGTGAATTGTCCAGAATACCAATATGCCAATACAGAACAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170922.2
CDS GCA 90 bp TTCATTCAAATTTATTCTCCAAAAGCACACGGGATCAGTGAAATTTaGCATAAAAACTGGAATGTTAAGGAGGAAGAAGACTCCCATCAA +
Preference number: 5 (lower is better)
Translates to: FIQIYSPKAHGISEI*HKNWNVKEEEDSHQ
Trigger: TTGATGGGAGTCTTCTTCCTCCTTAACATTCCAGTTTTTATGGCAAATTTCACTGATCCCGTGTGCTTTTGGAGAATAAATTTGAATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170922.2
CDS CAA 90 bp CTCCCTGGGTCTGTGACTTTGAAAGCGAGAACCACAGTGACTGTTTaGGCCAGAACTGTGGAAACAGCCACAGTGAATACAATTCCAAAT +
Preference number: 6 (lower is better)
Translates to: LPGSVTLKARTTVTV*ARTVETATVNTIPN
Trigger: ATTTGGAATTGTATTCACTGTGGCTGTTTCCACAGTTCTGGCCAAAACAGTCACTGTGGTTCTCGCTTTCAAAGTCACAGACCCAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170922.2
CDS CAA 72 bp AGGAAGTTTCTCAATCTTCTCCCTGGGTCTGTGACTTaGAAAGCGAGAACCACAGTGACTGTTTTGGCCAGA +
Preference number: 6 (lower is better)
Translates to: RKFLNLLPGSVT*KARTTVTVLAR
Trigger: TCTGGCCAAAACAGTCACTGTGGTTCTCGCTTTCAAAGTCACAGACCCAGGGAGAAGATTGAGAAACTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170922.2
CDS CAA 72 bp TCCTTTTCCATTGTCTATTGCCTGATTATCAACCTGTaGCAGATTCATCTCATGGAGGGCATGGGCTATGGC +
Preference number: 6 (lower is better)
Translates to: SFSIVYCLIINL*QIHLMEGMGYG
Trigger: GCCATAGCCCATGCCCTCCATGAGATGAATCTGCAACAGGTTGATAATCAGGCAATAGACAATGGAAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170922.2
CDS CAA 72 bp TCTGTGACTTTGAAAGCGAGAACCACAGTGACTGTTTaGGCCAGAACTGTGGAAACAGCCACAGTGAATACA +
Preference number: 6 (lower is better)
Translates to: SVTLKARTTVTV*ARTVETATVNT
Trigger: TGTATTCACTGTGGCTGTTTCCACAGTTCTGGCCAAAACAGTCACTGTGGTTCTCGCTTTCAAAGTCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170922.2
CDS CAA 72 bp CAATATCAACAAAGGGAGGAGACACTGCTAGCCAGATaGCACATAGAACACACTGGAGTAGGGAACATATGG +
Preference number: 6 (lower is better)
Translates to: QYQQREETLLAR*HIEHTGVGNIW
Trigger: CCATATGTTCCCTACTCCAGTGTGTTCTATGTGCAATCTGGCTAGCAGTGTCTCCTCCCTTTGTTGATATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170922.2
CDS GCA 72 bp CAAGCAGTGAGAACTGGCTCCTTTTCCATTGTCTATTaGCTGATTATCAACCTGTTGCAGATTCATCTCATG +
Preference number: 6 (lower is better)
Translates to: QAVRTGSFSIVY*LIINLLQIHLM
Trigger: CATGAGATGAATCTGCAACAGGTTGATAATCAGGCAATAGACAATGGAAAAGGAGCCAGTTCTCACTGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170922.2
CDS CCA 72 bp TTCATAATCACTTTGTCTCCAAGAGGATTAGTGAAGTaGGTCTTTCTTAGAAAGGAGTGTACCTTCAAGCAG +
Preference number: 6 (lower is better)
Translates to: FIITLSPRGLVK*VFLRKECTFKQ
Trigger: CTGCTTGAAGGTACACTCCTTTCTAAGAAAGACCCACTTCACTAATCCTCTTGGAGACAAAGTGATTATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170922.2
CDS CCA 72 bp AAAGCACACGGGATCAGTGAAATTTGCCATAAAAACTaGAATGTTAAGGAGGAAGAAGACTCCCATCAAAAT +
Preference number: 6 (lower is better)
Translates to: KAHGISEICHKN*NVKEEEDSHQN
Trigger: ATTTTGATGGGAGTCTTCTTCCTCCTTAACATTCCAGTTTTTATGGCAAATTTCACTGATCCCGTGTGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170922.2
CDS TCA 72 bp TCAAAGACATATTTGGTAAAAGATCAGGATTCCTGTTaGTTTCATCCATTGCAAAGGCCAATGCCAAAGCAT +
Preference number: 6 (lower is better)
Translates to: SKTYLVKDQDSC*FHPLQRPMPKH
Trigger: ATGCTTTGGCATTGGCCTTTGCAATGGATGAAATCAACAGGAATCCTGATCTTTTACCAAATATGTCTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170922.2
CDS CAA 72 bp ATCAAAGACATATTTGGTAAAAGATCAGGATTCCTGTaGATTTCATCCATTGCAAAGGCCAATGCCAAAGCA +
Preference number: 6 (lower is better)
Translates to: IKDIFGKRSGFL*ISSIAKANAKA
Trigger: TGCTTTGGCATTGGCCTTTGCAATGGATGAAATCAACAGGAATCCTGATCTTTTACCAAATATGTCTTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170922.2
CDS CAA 90 bp ATTCCCAAAATGAAAAATGTCATAGTCTTCCTGCGTTATTACTCTTaGTTTCATAATCACTTTGTCTCCAAGAGGATTAGTGAAGTGGGT +
Preference number: 6 (lower is better)
Translates to: IPKMKNVIVFLRYYS*FHNHFVSKRISEVG
Trigger: ACCCACTTCACTAATCCTCTTGGAGACAAAGTGATTATGAAACAAAGAGTAATAACGCAGGAAGACTATGACATTTTTCATTTTGGGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170922.2