Pregenerated sensors for VMN2R28 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066820Ensembl transcript IDs: ENSMUST00000086297.8, ENSMUST00000232789.2, ENSMUST00000233239.2, ENSMUST00000233390.2, ENSMUST00000233742.2, ENSMUST00000233941.2
Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTGGAGTCTCAGGATTCTGGGGTGTTAGGTGTGCCTTCTATCAGTaGGGTCAGACAAGGCAGTCTATGCTGCATATGTGTCAAGGACCT | + |
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Preference number: 1 (lower is better) Translates to: SGVSGFWGVRCAFYQ*GQTRQSMLHMCQGP Trigger: AGGTCCTTGACACATATGCAGCATAGACTGCCTTGTCTGACCTCACTGATAGAAGGCACACCTAACACCCCAGAATCCTGAGACTCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR GCA 90 bp | AACCTTGATTTCCAGCATCCAACTAGTACAGTCCAATTGATCTTTTaGCACTTTCTCTTCTCCCCTGGCTCCACCACTTACATGGTGACC | + |
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Preference number: 1 (lower is better) Translates to: NLDFQHPTSTVQLIF*HFLFSPGSTTYMVT Trigger: GGTCACCATGTAAGTGGTGGAGCCAGGGGAGAAGAGAAAGTGGCAAAAGATCAATTGGACTGTACTAGTTGGATGCTGGAAATCAAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR TCA 90 bp | TTAAATTATTTTGTTAATTTTGTTGCAGCCATTGGACACCTTCCTTaGTTTCCCTCCTACAACTTCTCATCCTATTCCTCCTCCCACTTG | + |
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Preference number: 1 (lower is better) Translates to: LNYFVNFVAAIGHLP*FPSYNFSSYSSSHL Trigger: CAAGTGGGAGGAGGAATAGGATGAGAAGTTGTAGGAGGGAAATCAAGGAAGGTGTCCAATGGCTGCAACAAAATTAACAAAATAATTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR TCA 90 bp | CCTCCAGTATGTCAAGAATTAGGCATATCTTCTCTTACTGAGGTCTaGCCATGCATTATTCTGATATATATCAGAAATTTTGACTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: PPVCQELGISSLTEV*PCIILIYIRNFDSG Trigger: CCCAGAGTCAAAATTTCTGATATATATCAGAATAATGCATGGTCAGACCTCAGTAAGAGAAGATATGCCTAATTCTTGACATACTGGAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCAGGAGTCTCAGGATTCTaGGGTGTTAGGTGTGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: SWESLRSQVCSTSLRVHPGVSGF*GVRCAF Trigger: GAAGGCACACCTAACACCCCAGAATCCTGAGACTCC...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTGGAGTCTCAGGATTCTaGGGTGTTAGGTGTGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: PPLLGNLAKVTSTESWESGVSGF*GVRCAF Trigger: GAAGGCACACCTAACACCCCAGAATCCTGAGACTCC...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGATATCCCCACCTCCCAAATGTGCCTTCTATCAGTaGGGTCAGACAAGGCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: SAFHTSSPISKRISPPPKCAFYQ*GQTRQS Trigger: AGACTGCCTTGTCTGACCTCACTGATAGAAGGCACA...TTTGGGAGGTGGGGATATCCTCTTGGAGATGGGGGAAGAGGTATGAAATGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCATCCCAATTCACCCCCTaGCTCTTCTGCATTTCATAC | + |
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Preference number: 2 (lower is better) Translates to: SWESLRSQVCSTSLRVHPSQFTP*LFCISY Trigger: GTATGAAATGCAGAAGAGTCAGGGGGTGAATTGGGA...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCACTTCTGATCATCCTATaGGGCACCATTCTCTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: SWESLRSQVCSTSLRVHPLLIIL*GTILFS Trigger: GCTGAAGAGAATGGTGCCCCATAGGATGATCAGAAG...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTACCATGCAGCCTTTTTaGGGGCTGGGTTATAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: PPLLGNLAKVTSTESWESTMQPF*GLGYKN Trigger: GTTCTTATAACCCAGCCCCCAAAAAGGCTGCATGGT...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCAACCATGCAGCCTTTTTaGGGGCTGGGTTATAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: SWESLRSQVCSTSLRVHPTMQPF*GLGYKN Trigger: GTTCTTATAACCCAGCCCCCAAAAAGGCTGCATGGT...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTTCCCATGCCACCCTTTaGGATTTTCTTTCTCCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: PPLLGNLAKVTSTESWESSHATL*DFLSPE Trigger: TTCTGGAGAAAGAAAATCTCAAAGGGTGGCATGGGA...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCAAGTGAATATATACCATaGAGCCTTTTTGGGGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SWESLRSQVCSTSLRVHPSEYIP*SLFGGW Trigger: CCAGCCCCCAAAAAGGCTGCATGGTATATATTCACT...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGACTTCTGATCATCCTATaGGGCACCATTCTCTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRLLIIL*GTILFS Trigger: GCTGAAGAGAATGGTGCCCCATAGGATGATCAGAAG...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGATATCCCCACCTCCCAAACTTCTGATCATCCTATaGGGCACCATTCTCTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: SAFHTSSPISKRISPPPKLLIIL*GTILFS Trigger: GCTGAAGAGAATGGTGCCCCATAGGATGATCAGAAG...TTTGGGAGGTGGGGATATCCTCTTGGAGATGGGGGAAGAGGTATGAAATGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTAAACTCAATCACAACTaGATACTGAGGGCAGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: PPLLGNLAKVTSTESWESKLNHN*ILRAVS Trigger: AGAGACTGCCCTCAGTATGCAGTTGTGATTGAGTTT...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCAGTCCAATTGATCTTTTaGCACTTTCTCTTCTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: SWESLRSQVCSTSLRVHPVQLIF*HFLFSP Trigger: AGGGGAGAAGAGAAAGTGGCAAAAGATCAATTGGAC...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTGTCCAATTGATCTTTTaGCACTTTCTCTTCTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: PPLLGNLAKVTSTESWESVQLIF*HFLFSP Trigger: AGGGGAGAAGAGAAAGTGGCAAAAGATCAATTGGAC...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCGGAGTCTCAGGATTCTaGGGTGTTAGGTGTGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: QVSPFNGASSMSRIRHIFGVSGF*GVRCAF Trigger: GAAGGCACACCTAACACCCCAGAATCCTGAGACTCC...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR TCA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGAAGGTTGAAGAGCAGCTaGAAAGAACAGGCAATATCT | + |
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Preference number: 2 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRRLKSS*KEQAIS Trigger: AGATATTGCCTGTTCTTTTCAGCTGCTCTTCAACCT...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR GCA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGATGTAGATCTTGGGTaGAAAGATTGGAGAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRDVDLG*KDWRAE Trigger: TTCTGCTCTCCAATCTTTGCACCCAAGATCTACATC...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGATATCCCCACCTCCCAAAGATGTAGATCTTGGGTaGAAAGATTGGAGAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: SAFHTSSPISKRISPPPKDVDLG*KDWRAE Trigger: TTCTGCTCTCCAATCTTTGCACCCAAGATCTACATC...TTTGGGAGGTGGGGATATCCTCTTGGAGATGGGGGAAGAGGTATGAAATGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTGGAGTCTCAGGATTCTaGGGTGTTAGGTGTGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: SSMRLRSIEQARHSGACLGVSGF*GVRCAF Trigger: GAAGGCACACCTAACACCCCAGAATCCTGAGACTCC...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCCTTTCTCTTCTCCCCTaGCTCCACCACTTACATGGT | + |
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Preference number: 2 (lower is better) Translates to: QVSPFNGASSMSRIRHIFLSLLP*LHHLHG Trigger: ACCATGTAAGTGGTGGAGCCAGGGGAGAAGAGAAAG...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCTCCCAATTCACCCCCTaGCTCTTCTGCATTTCATAC | + |
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Preference number: 2 (lower is better) Translates to: QVSPFNGASSMSRIRHIFSQFTP*LFCISY Trigger: GTATGAAATGCAGAAGAGTCAGGGGGTGAATTGGGA...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTATGATCATATTTCTATaGAGAGGAACTTCCGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: PPLLGNLAKVTSTESWESMIIFL*RGTSGS Trigger: ACTTCCGGAAGTTCCTCTTCATAGAAATATGATCAT...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCACCACCACTTACATGGTaGCCAGGAAATATAATAAAT | + |
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Preference number: 2 (lower is better) Translates to: SWESLRSQVCSTSLRVHPPPLTW*PGNIIN Trigger: ATTTATTATATTTCCTGGTCACCATGTAAGTGGTGG...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCACCTGGCCCTCTACTTaGGGCTATGTCTATATTCTG | + |
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Preference number: 2 (lower is better) Translates to: QVSPFNGASSMSRIRHIFTWPST*GYVYIL Trigger: CAGAATATAGACATAGCCTCAAGTAGAGGGCCAGGT...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTCTTATCAACTTTTACTaGAAGTTACCAGGGGGATAT | + |
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Preference number: 2 (lower is better) Translates to: PPLLGNLAKVTSTESWESLINFY*KLPGGY Trigger: ATATCCCCCTGGTAACTTCCAGTAAAAGTTGATAAG...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCACTTATCAACTTTTACTaGAAGTTACCAGGGGGATAT | + |
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Preference number: 2 (lower is better) Translates to: SWESLRSQVCSTSLRVHPLINFY*KLPGGY Trigger: ATATCCCCCTGGTAACTTCCAGTAAAAGTTGATAAG...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCCTTCTGATCATCCTATaGGGCACCATTCTCTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: QVSPFNGASSMSRIRHIFLLIIL*GTILFS Trigger: GCTGAAGAGAATGGTGCCCCATAGGATGATCAGAAG...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTCTTTCTCTTCTCCCCTaGCTCCACCACTTACATGGT | + |
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Preference number: 2 (lower is better) Translates to: SSMRLRSIEQARHSGACLLSLLP*LHHLHG Trigger: ACCATGTAAGTGGTGGAGCCAGGGGAGAAGAGAAAG...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCACCATGCAGCCTTTTTaGGGGCTGGGTTATAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: QVSPFNGASSMSRIRHIFTMQPF*GLGYKN Trigger: GTTCTTATAACCCAGCCCCCAAAAAGGCTGCATGGT...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCTCCCATGCCACCCTTTaGGATTTTCTTTCTCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: QVSPFNGASSMSRIRHIFSHATL*DFLSPE Trigger: TTCTGGAGAAAGAAAATCTCAAAGGGTGGCATGGGA...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTACCTGGCCCTCTACTTaGGGCTATGTCTATATTCTG | + |
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Preference number: 2 (lower is better) Translates to: SSMRLRSIEQARHSGACLTWPST*GYVYIL Trigger: CAGAATATAGACATAGCCTCAAGTAGAGGGCCAGGT...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCAGTGAATATATACCATaGAGCCTTTTTGGGGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: QVSPFNGASSMSRIRHIFSEYIP*SLFGGW Trigger: CCAGCCCCCAAAAAGGCTGCATGGTATATATTCACT...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGACTTATCAACTTTTACTaGAAGTTACCAGGGGGATAT | + |
|
Preference number: 2 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRLINFY*KLPGGY Trigger: ATATCCCCCTGGTAACTTCCAGTAAAAGTTGATAAG...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTCTTCTGATCATCCTATaGGGCACCATTCTCTTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SSMRLRSIEQARHSGACLLLIIL*GTILFS Trigger: GCTGAAGAGAATGGTGCCCCATAGGATGATCAGAAG...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCAGGTTGAAGAGCAGCTaGAAAGAACAGGCAATATCT | + |
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Preference number: 2 (lower is better) Translates to: QVSPFNGASSMSRIRHIFRLKSS*KEQAIS Trigger: AGATATTGCCTGTTCTTTTCAGCTGCTCTTCAACCT...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTTCCCATGCCACCCTTTaGGATTTTCTTTCTCCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SSMRLRSIEQARHSGACLSHATL*DFLSPE Trigger: TTCTGGAGAAAGAAAATCTCAAAGGGTGGCATGGGA...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCGATGTAGATCTTGGGTaGAAAGATTGGAGAGCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: QVSPFNGASSMSRIRHIFDVDLG*KDWRAE Trigger: TTCTGCTCTCCAATCTTTGCACCCAAGATCTACATC...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCCACTTTTGGGAAATTTaGCTAAGGTTACCTCCACTG | + |
|
Preference number: 2 (lower is better) Translates to: QVSPFNGASSMSRIRHIFHFWEI*LRLPPL Trigger: CAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTG...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTAGGTTGAAGAGCAGCTaGAAAGAACAGGCAATATCT | + |
|
Preference number: 2 (lower is better) Translates to: SSMRLRSIEQARHSGACLRLKSS*KEQAIS Trigger: AGATATTGCCTGTTCTTTTCAGCTGCTCTTCAACCT...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTGTCCAATTGATCTTTTaGCACTTTCTCTTCTCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: SSMRLRSIEQARHSGACLVQLIF*HFLFSP Trigger: AGGGGAGAAGAGAAAGTGGCAAAAGATCAATTGGAC...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTTTGCCTCTCATAGAGTaGTTACTAACTTCCCCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: SSMRLRSIEQARHSGACLLPLIE*LLTSPF Trigger: AAAGGGGGAAGTTAGTAAGCACTCTATGAGAGGCAA...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTTTTTGTTGCAGCCATTaGACACCTTCCTTGATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SSMRLRSIEQARHSGACLFCCSH*TPSLIS Trigger: GGAAATCAAGGAAGGTGTCCAATGGCTGCAACAAAA...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCATGATCATATTTCTATaGAGAGGAACTTCCGGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: QVSPFNGASSMSRIRHIFMIIFL*RGTSGS Trigger: ACTTCCGGAAGTTCCTCTTCATAGAAATATGATCAT...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTCTAGTACAGTCCAATTaGTCTTTTGCCACTTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: SSMRLRSIEQARHSGACLLVQSN*SFATFS Trigger: AGAGAAAGTGGCAAAAGATCAATTGGACTGTACTAG...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTCATATCTTCTCTTACTaGGGTCTGACCATGCATTAT | + |
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Preference number: 2 (lower is better) Translates to: SSMRLRSIEQARHSGACLHIFSY*GLTMHY Trigger: ATAATGCATGGTCAGACCTCAGTAAGAGAAGATATG...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCCTTATCAACTTTTACTaGAAGTTACCAGGGGGATAT | + |
|
Preference number: 2 (lower is better) Translates to: QVSPFNGASSMSRIRHIFLINFY*KLPGGY Trigger: ATATCCCCCTGGTAACTTCCAGTAAAAGTTGATAAG...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTATGATCATATTTCTATaGAGAGGAACTTCCGGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: SSMRLRSIEQARHSGACLMIIFL*RGTSGS Trigger: ACTTCCGGAAGTTCCTCTTCATAGAAATATGATCAT...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTCCACCACTTACATGGTaGCCAGGAAATATAATAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SSMRLRSIEQARHSGACLPPLTW*PGNIIN Trigger: ATTTATTATATTTCCTGGTCACCATGTAAGTGGTGG...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAATTTCTCATAGGTTGAAGAGCAGCTaGAAAGAACAGGCAATATCT | + |
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Preference number: 2 (lower is better) Translates to: TEYMHCNPVFGRYVPISHRLKSS*KEQAIS Trigger: AGATATTGCCTGTTCTTTTCAGCTGCTCTTCAACCT...ATGAGAAATTGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAATTTCTCATGATGTAGATCTTGGGTaGAAAGATTGGAGAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: TEYMHCNPVFGRYVPISHDVDLG*KDWRAE Trigger: TTCTGCTCTCCAATCTTTGCACCCAAGATCTACATC...ATGAGAAATTGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAATTTCTCATCTTATCAACTTTTACTaGAAGTTACCAGGGGGATAT | + |
|
Preference number: 2 (lower is better) Translates to: TEYMHCNPVFGRYVPISHLINFY*KLPGGY Trigger: ATATCCCCCTGGTAACTTCCAGTAAAAGTTGATAAG...ATGAGAAATTGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR GCA 72 bp | TCCTTAAGGGTCCACCCACTACCCTCCCCTGGATCCTaGACACTTCAATTCATTCTCCTGGCTCTCCAATTC | + |
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Preference number: 3 (lower is better) Translates to: SLRVHPLPSPGS*TLQFILLALQF Trigger: GAATTGGAGAGCCAGGAGAATGAATTGAAGTGTGCAGGATCCAGGGGAGGGTAGTGGGTGGACCCTTAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR GCA 72 bp | TCATCCTATTCCTCCTCCCACTTGCCTCTCATAGAGTaGTTACTAACTTCCCCCTTTGTCCCTACACCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SSYSSSHLPLIE*LLTSPFVPTPG Trigger: ACCTGGTGTAGGGACAAAGGGGGAAGTTAGTAAGCACTCTATGAGAGGCAAGTGGGAGGAGGAATAGGATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCATTCCCATGCCACCCTTaGAGATTTTCTTTCTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SWESLRSQVCSTSLRVHPFPCHP*RFSFSR Trigger: TCTGGAGAAAGAAAATCTCAAAGGGTGGCATGGGAA...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR TCA 72 bp | TCAGGATTCTGGGGTGTTAGGTGTGCCTTCTATCAGTaGGGTCAGACAAGGCAGTCTATGCTGCATATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SGFWGVRCAFYQ*GQTRQSMLHMC Trigger: ACACATATGCAGCATAGACTGCCTTGTCTGACCTCACTGATAGAAGGCACACCTAACACCCCAGAATCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR TCA 72 bp | ACCTTGATTTCCAGCATCCAACTAGTACAGTCCAATTaGTCTTTTGCCACTTTCTCTTCTCCCCTGGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TLISSIQLVQSN*SFATFSSPLAP Trigger: TGGAGCCAGGGGAGAAGAGAAAGTGGCAAAAGATCAATTGGACTGTACTAGTTGGATGCTGGAAATCAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCTTCCCATGCCACCCTTaGAGATTTTCTTTCTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QVSPFNGASSMSRIRHIFFPCHP*RFSFSR Trigger: TCTGGAGAAAGAAAATCTCAAAGGGTGGCATGGGAA...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCAACCTGGCCCTCTACTaGAGGCTATGTCTATATTCT | + |
|
Preference number: 3 (lower is better) Translates to: QVSPFNGASSMSRIRHIFNLALY*RLCLYS Trigger: AGAATATAGACATAGCCTCAAGTAGAGGGCCAGGTT...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTCCACTTTTGGGAAATTaGGCTAAGGTTACCTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: SSMRLRSIEQARHSGACLPLLGN*AKVTST Trigger: AGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGG...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTCATTGGACACCTTCCTaGATTTCCCTCCTACAACTT | + |
|
Preference number: 3 (lower is better) Translates to: SSMRLRSIEQARHSGACLHWTPS*ISLLQL Trigger: AAGTTGTAGGAGGGAAATCAAGGAAGGTGTCCAATG...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCACTAGTACAGTCCAATaGATCTTTTGCCACTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: QVSPFNGASSMSRIRHIFTSTVQ*IFCHFL Trigger: GAGAAAGTGGCAAAAGATCAATTGGACTGTACTAGT...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR TCA 72 bp | CATTTTAGACCATTGTCTGATAGGTTGAAGAGCAGCTaGAAAGAACAGGCAATATCTCTCATGTGTGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: HFRPLSDRLKSS*KEQAISLMCVL Trigger: GAGCACACACATGAGAGATATTGCCTGTTCTTTTCAGCTGCTCTTCAACCTATCAGACAATGGTCTAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR TCA 72 bp | TTTGTTAATTTTGTTGCAGCCATTGGACACCTTCCTTaGTTTCCCTCCTACAACTTCTCATCCTATTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FVNFVAAIGHLP*FPSYNFSSYSS Trigger: GGAGGAATAGGATGAGAAGTTGTAGGAGGGAAATCAAGGAAGGTGTCCAATGGCTGCAACAAAATTAACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR CCA 72 bp | GCATATGTGTCAAGGACCTTAGTTTATGAGAGGTTCTaGTTGACCATGTTAGTTGAGACTTCTGATCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: AYVSRTLVYERF*LTMLVETSDHP Trigger: AGGATGATCAGAAGTCTCAACTAACATGGTCAACCAGAACCTCTCATAAACTAAGGTCCTTGACACATATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTACTAGTACAGTCCAATaGATCTTTTGCCACTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SSMRLRSIEQARHSGACLTSTVQ*IFCHFL Trigger: GAGAAAGTGGCAAAAGATCAATTGGACTGTACTAGT...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR TCA 72 bp | TCCAGTATGTCAAGAATTAGGCATATCTTCTCTTACTaGGGTCTGACCATGCATTATTCTGATATATATCAG | + |
|
Preference number: 3 (lower is better) Translates to: SSMSRIRHIFSY*GLTMHYSDIYQ Trigger: CTGATATATATCAGAATAATGCATGGTCAGACCTCAGTAAGAGAAGATATGCCTAATTCTTGACATACTGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR TCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTGGCAGGGGCTGCAAATaGAACAGCAGGCTGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: PPLLGNLAKVTSTESWESGRGCK*NSRLPL Trigger: GAGTGGCAGCCTGCTGTTTCATTTGCAGCCCCTGCC...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR TCA 90 bp | TCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGATATCCCCACCTCCCAAAGGCAGGGGCTGCAAATaGAACAGCAGGCTGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: SAFHTSSPISKRISPPPKGRGCK*NSRLPL Trigger: GAGTGGCAGCCTGCTGTTTCATTTGCAGCCCCTGCC...TTTGGGAGGTGGGGATATCCTCTTGGAGATGGGGGAAGAGGTATGAAATGCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGCAGGGGCTGCAAATaGAACAGCAGGCTGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRGRGCK*NSRLPL Trigger: GAGTGGCAGCCTGCTGTTTCATTTGCAGCCCCTGCC...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTGTCTCATGGAGTGCATaGGCCATGGCATGCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPLLGNLAKVTSTESWESVSWSA*AMACTA Trigger: TGCTGTGCATGCCATGGCCCATGCACTCCATGAGAC...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGATATCCCCACCTCCCAAAGTCTCATGGAGTGCATaGGCCATGGCATGCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SAFHTSSPISKRISPPPKVSWSA*AMACTA Trigger: TGCTGTGCATGCCATGGCCCATGCACTCCATGAGAC...TTTGGGAGGTGGGGATATCCTCTTGGAGATGGGGGAAGAGGTATGAAATGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCATCTCTACAGCAACCATaGCCTTGCCCTTGGTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SWESLRSQVCSTSLRVHPSLQQP*PCPWCY Trigger: ATAGCACCAAGGGCAAGGTCATGGTTGCTGTAGAGA...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTTCTCTACAGCAACCATaGCCTTGCCCTTGGTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PPLLGNLAKVTSTESWESSLQQP*PCPWCY Trigger: ATAGCACCAAGGGCAAGGTCATGGTTGCTGTAGAGA...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCAACATCCAAGAATCCCTaGACTGGATGCCAGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SWESLRSQVCSTSLRVHPTSKNP*TGCQDG Trigger: TCCATCCTGGCATCCAGTTCAGGGATTCTTGGATGT...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR GCA 90 bp | TCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGATATCCCCACCTCCCAAAAATGAAACAGCAGGCTaGCACTCTCTCCTTCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SAFHTSSPISKRISPPPKNETAG*HSLLPG Trigger: TCCCGGAAGGAGAGAGTGGCAGCCTGCTGTTTCATT...TTTGGGAGGTGGGGATATCCTCTTGGAGATGGGGGAAGAGGTATGAAATGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTGGCAGGGGCTGCAAATaGAACAGCAGGCTGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: SSMRLRSIEQARHSGACLGRGCK*NSRLPL Trigger: GAGTGGCAGCCTGCTGTTTCATTTGCAGCCCCTGCC...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTAAAGTACCAGAGCTGTaGATGCAGAGAAGCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPLLGNLAKVTSTESWESKVPEL*MQRSQR Trigger: CCTTTGGCTTCTCTGCATTCACAGCTCTGGTACTTT...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGATCTCTACAGCAACCATaGCCTTGCCCTTGGTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRSLQQP*PCPWCY Trigger: ATAGCACCAAGGGCAAGGTCATGGTTGCTGTAGAGA...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGAACATCCAAGAATCCCTaGACTGGATGCCAGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRTSKNP*TGCQDG Trigger: TCCATCCTGGCATCCAGTTCAGGGATTCTTGGATGT...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCATACCAGAGCTGTGAATaGAGAGAAGCCAAAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SWESLRSQVCSTSLRVHPYQSCE*REAKGH Trigger: ATGGCCTTTGGCTTCTCTGCATTCACAGCTCTGGTA...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCAGGAGTGCATGGGCCATaGCATGCACAGCATTATATA | + |
|
Preference number: 4 (lower is better) Translates to: SWESLRSQVCSTSLRVHPGVHGP*HAQHYI Trigger: TATATAATGCTGTGCATGCCATGGCCCATGCACTCC...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
||
| CDS-3UTR TCA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGAAAAGTACCAGAGCTGTaGATGCAGAGAAGCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRKVPEL*MQRSQR Trigger: CCTTTGGCTTCTCTGCATTCACAGCTCTGGTACTTT...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR GCA 90 bp | TCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGATATCCCCACCTCCCAAATACCAGAGCTGTGAATaGAGAGAAGCCAAAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SAFHTSSPISKRISPPPKYQSCE*REAKGH Trigger: ATGGCCTTTGGCTTCTCTGCATTCACAGCTCTGGTA...TTTGGGAGGTGGGGATATCCTCTTGGAGATGGGGGAAGAGGTATGAAATGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CCA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGAGTGCATGGGCCATaGCATGCACAGCATTATATA | + |
|
Preference number: 4 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRGVHGP*HAQHYI Trigger: TATATAATGCTGTGCATGCCATGGCCCATGCACTCC...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCAACAATAGGAGTGTCATaGTGCTTCACAAACGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SWESLRSQVCSTSLRVHPTIGVS*CFTNAQ Trigger: TTGGGCGTTTGTGAAGCACCATGACACTCCTATTGT...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CCA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCACAAGAATCCCTGAACTaGATGCCAGGATGGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SWESLRSQVCSTSLRVHPQESLN*MPGWRK Trigger: TTTTCTCCATCCTGGCATCCAGTTCAGGGATTCTTG...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR CAA 72 bp | CCCTCCTACAACTTCTCATCCTATTCCTCCTCCCACTaGCCTCTCATAGAGTGCTTACTAACTTCCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSYNFSSYSSSH*PLIECLLTSPF Trigger: AAAGGGGGAAGTTAGTAAGCACTCTATGAGAGGCAAGTGGGAGGAGGAATAGGATGAGAAGTTGTAGGAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR TCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTAAGCCAGAATTACAGTaGTTGTTTTGGCCAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PPLLGNLAKVTSTESWESKPELQ*LFWPEL Trigger: CAGTTCTGGCCAAAACAATCACTGTAATTCTGGCTT...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR GCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCAATGAAACAGCAGGCTaGCACTCTCTCCTTCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QVSPFNGASSMSRIRHIFNETAG*HSLLPG Trigger: TCCCGGAAGGAGAGAGTGGCAGCCTGCTGTTTCATT...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTGTCTCATGGAGTGCATaGGCCATGGCATGCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSMRLRSIEQARHSGACLVSWSA*AMACTA Trigger: TGCTGTGCATGCCATGGCCCATGCACTCCATGAGAC...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| CDS-3UTR CCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTAGAGGATTAGTAAAGTaGGTCTTCCTCAGAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPLLGNLAKVTSTESWESRGLVK*VFLRKE Trigger: CTCCTTTCTGAGGAAGACCCACTTTACTAATCCTCT...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086297.8 ENSMUST00000233390.2 |
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| CDS-3UTR CCA 90 bp | TCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGATATCCCCACCTCCCAAAACTGCACACAGAGGATaGCATTTTTCTCCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SAFHTSSPISKRISPPPKTAHRG*HFSPCC Trigger: ACAGCAAGGAGAAAAATGCCATCCTCTGTGTGCAGT...TTTGGGAGGTGGGGATATCCTCTTGGAGATGGGGGAAGAGGTATGAAATGCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000086297.8 ENSMUST00000233390.2 |
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| CDS-3UTR CCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTGGCATACTGGTATTCTaGACAATTCACACAGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: PPLLGNLAKVTSTESWESGILVF*TIHTVI Trigger: GATCACTGTGTGAATTGTCCAGAATACCAGTATGCC...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCATGTTCTGTTCTGTGTTaGCATACTGGTATTCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SWESLRSQVCSTSLRVHPCSVLC*HTGILD Trigger: GTCCAGAATACCAGTATGCCAACACAGAACAGAACA...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTAACTGGATGCCAGGATaGAGAAAATCTCTACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PPLLGNLAKVTSTESWESNWMPG*RKSLQQ Trigger: TTGCTGTAGAGATTTTCTCCATCCTGGCATCCAGTT...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CCA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGACAAGAATCCCTGAACTaGATGCCAGGATGGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRQESLN*MPGWRK Trigger: TTTTCTCCATCCTGGCATCCAGTTCAGGGATTCTTG...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGATATCCCCACCTCCCAAACAAGAATCCCTGAACTaGATGCCAGGATGGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SAFHTSSPISKRISPPPKQESLN*MPGWRK Trigger: TTTTCTCCATCCTGGCATCCAGTTCAGGGATTCTTG...TTTGGGAGGTGGGGATATCCTCTTGGAGATGGGGGAAGAGGTATGAAATGCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR TCA 90 bp | TCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGATATCCCCACCTCCCAAAGTGGAAAATATGGGCTaGACTTTCCTAACTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SAFHTSSPISKRISPPPKVENMG*TFLTSP Trigger: AGGTGAAGTTAGGAAAGTTCAGCCCATATTTTCCAC...TTTGGGAGGTGGGGATATCCTCTTGGAGATGGGGGAAGAGGTATGAAATGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086297.8 ENSMUST00000233390.2 |
||
| CDS-3UTR TCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTGCACACAGAATACATTaGAATAGGGAACATATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPLLGNLAKVTSTESWESAHRIH*NREHMG Trigger: TCCCATATGTTCCCTATTTCAATGTATTCTGTGTGC...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | TCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGATATCCCCACCTCCCAAAGTAGAATGCAGTAACTaGGCCCTTGTTACATACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SAFHTSSPISKRISPPPKVECSN*ALVTYK Trigger: CTTGTATGTAACAAGGGCTCAGTTACTGCATTCTAC...TTTGGGAGGTGGGGATATCCTCTTGGAGATGGGGGAAGAGGTATGAAATGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCTCTCTACAGCAACCATaGCCTTGCCCTTGGTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: QVSPFNGASSMSRIRHIFSLQQP*PCPWCY Trigger: ATAGCACCAAGGGCAAGGTCATGGTTGCTGTAGAGA...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCACATCCAAGAATCCCTaGACTGGATGCCAGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: QVSPFNGASSMSRIRHIFTSKNP*TGCQDG Trigger: TCCATCCTGGCATCCAGTTCAGGGATTCTTGGATGT...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCAGTCTCCAAAAGCATGTaGAATCAATGTAATTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SWESLRSQVCSTSLRVHPVSKSM*NQCNWP Trigger: TGGCCAATTACATTGATTCCACATGCTTTTGGAGAC...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTGTCTCCAAAAGCATGTaGAATCAATGTAATTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPLLGNLAKVTSTESWESVSKSM*NQCNWP Trigger: TGGCCAATTACATTGATTCCACATGCTTTTGGAGAC...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTGAAATCTCAGCATGGTaGGGTAGAAAAGTAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PPLLGNLAKVTSTESWESEISAW*GRKVKV Trigger: GACTTTTACTTTTCTACCCCACCATGCTGAGATTTC...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCACCAGAAATCTCAGCATaGTGGGGTAGAAAAGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SWESLRSQVCSTSLRVHPPEISA*WGRKVK Trigger: TTTTACTTTTCTACCCCACCATGCTGAGATTTCTGG...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
||
| CDS-3UTR CCA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGCATACTGGTATTCTaGACAATTCACACAGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRGILVF*TIHTVI Trigger: GATCACTGTGTGAATTGTCCAGAATACCAGTATGCC...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CCA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGATGTTCTGTTCTGTGTTaGCATACTGGTATTCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRCSVLC*HTGILD Trigger: GTCCAGAATACCAGTATGCCAACACAGAACAGAACA...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGATATCCCCACCTCCCAAAAACTGGATGCCAGGATaGAGAAAATCTCTACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SAFHTSSPISKRISPPPKNWMPG*RKSLQQ Trigger: TTGCTGTAGAGATTTTCTCCATCCTGGCATCCAGTT...TTTGGGAGGTGGGGATATCCTCTTGGAGATGGGGGAAGAGGTATGAAATGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | ACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAATTTCTCATGGCAGGGGCTGCAAATaGAACAGCAGGCTGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TEYMHCNPVFGRYVPISHGRGCK*NSRLPL Trigger: GAGTGGCAGCCTGCTGTTTCATTTGCAGCCCCTGCC...ATGAGAAATTGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTATACAATTCCAAATGTaGTTTGCTGTAAGACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPLLGNLAKVTSTESWESIQFQM*FAVRHR Trigger: CCTGTGTCTTACAGCAAATCACATTTGGAATTGTAT...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTTCTCTACAGCAACCATaGCCTTGCCCTTGGTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SSMRLRSIEQARHSGACLSLQQP*PCPWCY Trigger: ATAGCACCAAGGGCAAGGTCATGGTTGCTGTAGAGA...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR GCA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTGATGTAGATCTTGGGTaGAAAGATACATCCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PPLLGNLAKVTSTESWESDVDLG*KDTSKN Trigger: ATTCTTGGATGTATCTTTGCACCCAAGATCTACATC...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CCA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGAAATCTCAGCATGGTaGGGTAGAAAAGTAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PIHPLTLLHFIPLPPSPREISAW*GRKVKV Trigger: GACTTTTACTTTTCTACCCCACCATGCTGAGATTTC...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCATCTGTGCTTTTGAGATaGAACAATGTCTGTACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SWESLRSQVCSTSLRVHPSVLLR*NNVCTN Trigger: GTTTGTACAGACATTGTTCCATCTCAAAAGCACAGA...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
||
| 3UTR CAA 72 bp | AACCTTGATTTCCAGCATCCAACTAGTACAGTCCAATaGATCTTTTGCCACTTTCTCTTCTCCCCTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NLDFQHPTSTVQ*IFCHFLFSPGS Trigger: GGAGCCAGGGGAGAAGAGAAAGTGGCAAAAGATCAATTGGACTGTACTAGTTGGATGCTGGAAATCAAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCGAACTGCTCCAAGGATaGAGGAACAAGTTTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVSPFNGASSMSRIRHIFELLQG*RNKFDP Trigger: TGGATCAAACTTGTTCCTTCATCCTTGGAGCAGTTC...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | TCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGATATCCCCACCTCCCAAAGATCAGGATTTCTGTTaGTTTCATCCATTGAAAACG | + |
|
Preference number: 4 (lower is better) Translates to: SAFHTSSPISKRISPPPKDQDFC*FHPLKT Trigger: CGTTTTCAATGGATGAAATCAACAGAAATCCTGATC...TTTGGGAGGTGGGGATATCCTCTTGGAGATGGGGGAAGAGGTATGAAATGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGATCAGGATTTCTGTTaGTTTCATCCATTGAAAACG | + |
|
Preference number: 4 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRDQDFC*FHPLKT Trigger: CGTTTTCAATGGATGAAATCAACAGAAATCCTGATC...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTAAAGTACCAGAGCTGTaGATGCAGAGAAGCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSMRLRSIEQARHSGACLKVPEL*MQRSQR Trigger: CCTTTGGCTTCTCTGCATTCACAGCTCTGGTACTTT...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTGACCACAATCTGCACTaGACACAGAGGATGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SSMRLRSIEQARHSGACLDHNLH*TQRMAF Trigger: AAATGCCATCCTCTGTGTGCAGTGCAGATTGTGGTC...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086297.8 ENSMUST00000233390.2 |
||
| CDS-3UTR GCA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGATGTAGATCTTGGGTaGAAAGATACATCCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRDVDLG*KDTSKN Trigger: ATTCTTGGATGTATCTTTGCACCCAAGATCTACATC...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR GCA 90 bp | TCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGATATCCCCACCTCCCAAAGATGTAGATCTTGGGTaGAAAGATACATCCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SAFHTSSPISKRISPPPKDVDLG*KDTSKN Trigger: ATTCTTGGATGTATCTTTGCACCCAAGATCTACATC...TTTGGGAGGTGGGGATATCCTCTTGGAGATGGGGGAAGAGGTATGAAATGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CCA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGATCTGTGCTTTTGAGATaGAACAATGTCTGTACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRSVLLR*NNVCTN Trigger: GTTTGTACAGACATTGTTCCATCTCAAAAGCACAGA...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTGGAGTGCATGGGCCATaGCATGCACAGCATTATATA | + |
|
Preference number: 4 (lower is better) Translates to: SSMRLRSIEQARHSGACLGVHGP*HAQHYI Trigger: TATATAATGCTGTGCATGCCATGGCCCATGCACTCC...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCACAATAGGAGTGTCATaGTGCTTCACAAACGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QVSPFNGASSMSRIRHIFTIGVS*CFTNAQ Trigger: TTGGGCGTTTGTGAAGCACCATGACACTCCTATTGT...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCTTGGCCATGAGAAGTTaGATCTTGAGGAGAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVSPFNGASSMSRIRHIFLAMRS*ILRRKK Trigger: CTTCTTTCTCCTCAAGATTCAACTTCTCATGGCCAA...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCGTAGAATGCAGTAACTaGGCCCTTGTTACATACAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVSPFNGASSMSRIRHIFVECSN*ALVTYK Trigger: CTTGTATGTAACAAGGGCTCAGTTACTGCATTCTAC...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR GCA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGATTTTCCATTGTCTATTaGCTGATTATCAACCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRFSIVY*LIINLL Trigger: CAACAGGTTGATAATCAGGCAATAGACAATGGAAAA...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
||
| CDS-3UTR GCA 90 bp | TCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGATATCCCCACCTCCCAAATTTTCCATTGTCTATTaGCTGATTATCAACCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SAFHTSSPISKRISPPPKFSIVY*LIINLL Trigger: CAACAGGTTGATAATCAGGCAATAGACAATGGAAAA...TTTGGGAGGTGGGGATATCCTCTTGGAGATGGGGGAAGAGGTATGAAATGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
||
| CDS-3UTR CCA 90 bp | GATTCTAAAACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAGTCTCATGGAGTGCATaGGCCATGGCATGCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DSKTEYMHCNPVFGRYVPVSWSA*AMACTA Trigger: TGCTGTGCATGCCATGGCCCATGCACTCCATGAGAC...TGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGTTTTAGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
||
| CDS-3UTR CCA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGAAAAGTATTCACCATGTaGAAAATATGGGCTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRKVFTM*KIWAEL Trigger: AAGTTCAGCCCATATTTTCCACATGGTGAATACTTT...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000086297.8 ENSMUST00000233390.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTACTGCACACAGAGGATaGCATTTTTCTCCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSMRLRSIEQARHSGACLTAHRG*HFSPCC Trigger: ACAGCAAGGAGAAAAATGCCATCCTCTGTGTGCAGT...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086297.8 ENSMUST00000233390.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCTGTTCTGTTCTGTGTTaGCATACTGGTATTCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QVSPFNGASSMSRIRHIFCSVLC*HTGILD Trigger: GTCCAGAATACCAGTATGCCAACACAGAACAGAACA...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCAACTGGATGCCAGGATaGAGAAAATCTCTACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QVSPFNGASSMSRIRHIFNWMPG*RKSLQQ Trigger: TTGCTGTAGAGATTTTCTCCATCCTGGCATCCAGTT...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTCAAGAATCCCTGAACTaGATGCCAGGATGGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSMRLRSIEQARHSGACLQESLN*MPGWRK Trigger: TTTTCTCCATCCTGGCATCCAGTTCAGGGATTCTTG...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTTTGGCCATGAGAAGTTaGATCTTGAGGAGAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSMRLRSIEQARHSGACLLAMRS*ILRRKK Trigger: CTTCTTTCTCCTCAAGATTCAACTTCTCATGGCCAA...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTAAGCCAGAATTACAGTaGTTGTTTTGGCCAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSMRLRSIEQARHSGACLKPELQ*LFWPEL Trigger: CAGTTCTGGCCAAAACAATCACTGTAATTCTGGCTT...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTGTAGAATGCAGTAACTaGGCCCTTGTTACATACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSMRLRSIEQARHSGACLVECSN*ALVTYK Trigger: CTTGTATGTAACAAGGGCTCAGTTACTGCATTCTAC...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR GCA 90 bp | ACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAATTTCTCATAATGAAACAGCAGGCTaGCACTCTCTCCTTCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TEYMHCNPVFGRYVPISHNETAG*HSLLPG Trigger: TCCCGGAAGGAGAGAGTGGCAGCCTGCTGTTTCATT...ATGAGAAATTGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR GCA 90 bp | GATTCTAAAACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAAATGAAACAGCAGGCTaGCACTCTCTCCTTCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSKTEYMHCNPVFGRYVPNETAG*HSLLPG Trigger: TCCCGGAAGGAGAGAGTGGCAGCCTGCTGTTTCATT...TGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGTTTTAGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCGTCTCCAAAAGCATGTaGAATCAATGTAATTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVSPFNGASSMSRIRHIFVSKSM*NQCNWP Trigger: TGGCCAATTACATTGATTCCACATGCTTTTGGAGAC...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTGGCATACTGGTATTCTaGACAATTCACACAGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SSMRLRSIEQARHSGACLGILVF*TIHTVI Trigger: GATCACTGTGTGAATTGTCCAGAATACCAGTATGCC...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCGATCAGGATTTCTGTTaGTTTCATCCATTGAAAACG | + |
|
Preference number: 4 (lower is better) Translates to: QVSPFNGASSMSRIRHIFDQDFC*FHPLKT Trigger: CGTTTTCAATGGATGAAATCAACAGAAATCCTGATC...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR TCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTGCACACAGAATACATTaGAATAGGGAACATATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSMRLRSIEQARHSGACLAHRIH*NREHMG Trigger: TCCCATATGTTCCCTATTTCAATGTATTCTGTGTGC...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR TCA 90 bp | GATTCTAAAACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCATCTCTACAGCAACCATaGCCTTGCCCTTGGTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: DSKTEYMHCNPVFGRYVPSLQQP*PCPWCY Trigger: ATAGCACCAAGGGCAAGGTCATGGTTGCTGTAGAGA...TGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGTTTTAGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR TCA 90 bp | ACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAATTTCTCATACATCCAAGAATCCCTaGACTGGATGCCAGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: TEYMHCNPVFGRYVPISHTSKNP*TGCQDG Trigger: TCCATCCTGGCATCCAGTTCAGGGATTCTTGGATGT...ATGAGAAATTGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR TCA 90 bp | GATTCTAAAACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAACATCCAAGAATCCCTaGACTGGATGCCAGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSKTEYMHCNPVFGRYVPTSKNP*TGCQDG Trigger: TCCATCCTGGCATCCAGTTCAGGGATTCTTGGATGT...TGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGTTTTAGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR GCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCGATGTAGATCTTGGGTaGAAAGATACATCCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QVSPFNGASSMSRIRHIFDVDLG*KDTSKN Trigger: ATTCTTGGATGTATCTTTGCACCCAAGATCTACATC...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTGTCTCCAAAAGCATGTaGAATCAATGTAATTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSMRLRSIEQARHSGACLVSKSM*NQCNWP Trigger: TGGCCAATTACATTGATTCCACATGCTTTTGGAGAC...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTGAAATCTCAGCATGGTaGGGTAGAAAAGTAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSMRLRSIEQARHSGACLEISAW*GRKVKV Trigger: GACTTTTACTTTTCTACCCCACCATGCTGAGATTTC...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| CDS-3UTR CCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTCCAGAAATCTCAGCATaGTGGGGTAGAAAAGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSMRLRSIEQARHSGACLPEISA*WGRKVK Trigger: TTTTACTTTTCTACCCCACCATGCTGAGATTTCTGG...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| CDS-3UTR CCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCTCTGTGCTTTTGAGATaGAACAATGTCTGTACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QVSPFNGASSMSRIRHIFSVLLR*NNVCTN Trigger: GTTTGTACAGACATTGTTCCATCTCAAAAGCACAGA...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| CDS-3UTR TCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTGATCAGGATTTCTGTTaGTTTCATCCATTGAAAACG | + |
|
Preference number: 4 (lower is better) Translates to: SSMRLRSIEQARHSGACLDQDFC*FHPLKT Trigger: CGTTTTCAATGGATGAAATCAACAGAAATCCTGATC...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR GCA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCTTTTCCATTGTCTATTaGCTGATTATCAACCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QVSPFNGASSMSRIRHIFFSIVY*LIINLL Trigger: CAACAGGTTGATAATCAGGCAATAGACAATGGAAAA...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| CDS-3UTR GCA 90 bp | GATTCTAAAACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCATACCAGAGCTGTGAATaGAGAGAAGCCAAAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DSKTEYMHCNPVFGRYVPYQSCE*REAKGH Trigger: ATGGCCTTTGGCTTCTCTGCATTCACAGCTCTGGTA...TGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGTTTTAGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR GCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTGATGTAGATCTTGGGTaGAAAGATACATCCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSMRLRSIEQARHSGACLDVDLG*KDTSKN Trigger: ATTCTTGGATGTATCTTTGCACCCAAGATCTACATC...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CCA 90 bp | GATTCTAAAACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAGGAGTGCATGGGCCATaGCATGCACAGCATTATATA | + |
|
Preference number: 4 (lower is better) Translates to: DSKTEYMHCNPVFGRYVPGVHGP*HAQHYI Trigger: TATATAATGCTGTGCATGCCATGGCCCATGCACTCC...TGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGTTTTAGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| 3UTR CAA 72 bp | TATGTGTCAAGGACCTTAGTTTATGAGAGGTTCTGGTaGACCATGTTAGTTGAGACTTCTGATCATCCTATG | + |
|
Preference number: 4 (lower is better) Translates to: YVSRTLVYERFW*TMLVETSDHPM Trigger: CATAGGATGATCAGAAGTCTCAACTAACATGGTCAACCAGAACCTCTCATAAACTAAGGTCCTTGACACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CCA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTAAAGTATTCACCATGTaGAAAATATGGGCTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SSMRLRSIEQARHSGACLKVFTM*KIWAEL Trigger: AAGTTCAGCCCATATTTTCCACATGGTGAATACTTT...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086297.8 ENSMUST00000233390.2 |
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| CDS-3UTR CCA 90 bp | ACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAATTTCTCATCAAGAATCCCTGAACTaGATGCCAGGATGGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TEYMHCNPVFGRYVPISHQESLN*MPGWRK Trigger: TTTTCTCCATCCTGGCATCCAGTTCAGGGATTCTTG...ATGAGAAATTGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR TCA 90 bp | GATTCTAAAACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCATTGGCCATGAGAAGTTaGATCTTGAGGAGAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DSKTEYMHCNPVFGRYVPLAMRS*ILRRKK Trigger: CTTCTTTCTCCTCAAGATTCAACTTCTCATGGCCAA...TGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGTTTTAGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR TCA 90 bp | ACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAATTTCTCATTTGGCCATGAGAAGTTaGATCTTGAGGAGAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TEYMHCNPVFGRYVPISHLAMRS*ILRRKK Trigger: CTTCTTTCTCCTCAAGATTCAACTTCTCATGGCCAA...ATGAGAAATTGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR TCA 90 bp | ACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAATTTCTCATGTGGAAAATATGGGCTaGACTTTCCTAACTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TEYMHCNPVFGRYVPISHVENMG*TFLTSP Trigger: AGGTGAAGTTAGGAAAGTTCAGCCCATATTTTCCAC...ATGAGAAATTGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086297.8 ENSMUST00000233390.2 |
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| CDS-3UTR TCA 90 bp | ACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAATTTCTCATAAGCCAGAATTACAGTaGTTGTTTTGGCCAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TEYMHCNPVFGRYVPISHKPELQ*LFWPEL Trigger: CAGTTCTGGCCAAAACAATCACTGTAATTCTGGCTT...ATGAGAAATTGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR TCA 90 bp | ACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAATTTCTCATGTAGAATGCAGTAACTaGGCCCTTGTTACATACAAG | + |
|
Preference number: 4 (lower is better) Translates to: TEYMHCNPVFGRYVPISHVECSN*ALVTYK Trigger: CTTGTATGTAACAAGGGCTCAGTTACTGCATTCTAC...ATGAGAAATTGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CCA 90 bp | GATTCTAAAACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAAACTGGATGCCAGGATaGAGAAAATCTCTACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: DSKTEYMHCNPVFGRYVPNWMPG*RKSLQQ Trigger: TTGCTGTAGAGATTTTCTCCATCCTGGCATCCAGTT...TGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGTTTTAGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| 3UTR CAA 72 bp | CCTAATTCAACCACAGGGGGTCTCAGCTTTAGTTCATaGTTGGATACAATATTTTTGTTGGATACAAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: PNSTTGGLSFSS*LDTIFLLDTRF Trigger: GAATCTTGTATCCAACAAAAATATTGTATCCAACAATGAACTAAAGCTGAGACCCCCTGTGGTTGAATTAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR TCA 90 bp | ACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAATTTCTCATGCACACAGAATACATTaGAATAGGGAACATATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TEYMHCNPVFGRYVPISHAHRIH*NREHMG Trigger: TCCCATATGTTCCCTATTTCAATGTATTCTGTGTGC...ATGAGAAATTGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CCA 90 bp | GATTCTAAAACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAGTCTCCAAAAGCATGTaGAATCAATGTAATTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DSKTEYMHCNPVFGRYVPVSKSM*NQCNWP Trigger: TGGCCAATTACATTGATTCCACATGCTTTTGGAGAC...TGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGTTTTAGAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CCA 90 bp | ACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAATTTCTCATGAAATCTCAGCATGGTaGGGTAGAAAAGTAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TEYMHCNPVFGRYVPISHEISAW*GRKVKV Trigger: GACTTTTACTTTTCTACCCCACCATGCTGAGATTTC...ATGAGAAATTGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| CDS-3UTR TCA 90 bp | GATTCTAAAACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAGATCAGGATTTCTGTTaGTTTCATCCATTGAAAACG | + |
|
Preference number: 4 (lower is better) Translates to: DSKTEYMHCNPVFGRYVPDQDFC*FHPLKT Trigger: CGTTTTCAATGGATGAAATCAACAGAAATCCTGATC...TGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGTTTTAGAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR TCA 90 bp | GATTCTAAAACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAATACAATTCCAAATGTaGTTTGCTGTAAGACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: DSKTEYMHCNPVFGRYVPIQFQM*FAVRHR Trigger: CCTGTGTCTTACAGCAAATCACATTTGGAATTGTAT...TGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGTTTTAGAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR GCA 90 bp | ACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAATTTCTCATGATGTAGATCTTGGGTaGAAAGATACATCCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TEYMHCNPVFGRYVPISHDVDLG*KDTSKN Trigger: ATTCTTGGATGTATCTTTGCACCCAAGATCTACATC...ATGAGAAATTGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CCA 90 bp | GATTCTAAAACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCATCTGTGCTTTTGAGATaGAACAATGTCTGTACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DSKTEYMHCNPVFGRYVPSVLLR*NNVCTN Trigger: GTTTGTACAGACATTGTTCCATCTCAAAAGCACAGA...TGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGTTTTAGAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| 3UTR CAA 72 bp | ATTATTCTGATATATATCAGAAATTTTGACTCTGGGTaGATAAACCTGGCCCTCTACTTGAGGCTATGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: IILIYIRNFDSG*INLALYLRLCL Trigger: TAGACATAGCCTCAAGTAGAGGGCCAGGTTTATCAACCCAGAGTCAAAATTTCTGATATATATCAGAATAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR GCA 90 bp | ACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAATTTCTCATTTTTCCATTGTCTATTaGCTGATTATCAACCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TEYMHCNPVFGRYVPISHFSIVY*LIINLL Trigger: CAACAGGTTGATAATCAGGCAATAGACAATGGAAAA...ATGAGAAATTGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
||
| CDS GCA 90 bp | AGAAATTTCATTTTCAGGGCAGGGGCTGCAAATGAAACAGCAGGCTaGCACTCTCTCCTTCCGGGATCTTCTGAATCCAGGACCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: RNFIFRAGAANETAG*HSLLPGSSESRTTI Trigger: GATTGTGGTCCTGGATTCAGAAGATCCCGGAAGGAGAGAGTGGCAGCCTGCTGTTTCATTTGCAGCCCCTGCCCTGAAAATGAAATTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CAA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTCCTGGGCCTGTGAATTaGAAAGCCAGAATTACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PPLLGNLAKVTSTESWESPGPVN*KARITV Trigger: CACTGTAATTCTGGCTTTCAAATTCACAGGCCCAGG...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CAA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCACCTGGGCCTGTGAATTaGAAAGCCAGAATTACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SWESLRSQVCSTSLRVHPPGPVN*KARITV Trigger: CACTGTAATTCTGGCTTTCAAATTCACAGGCCCAGG...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CAA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTGCCGACCCAGTTCCATaGGAAGTAAAGTATGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PPLLGNLAKVTSTESWESADPVP*EVKYEV Trigger: TACTTCATACTTTACTTCCAATGGAACTGGGTCGGC...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
||
| CDS-3UTR CAA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGACCTGGGCCTGTGAATTaGAAAGCCAGAATTACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRPGPVN*KARITV Trigger: CACTGTAATTCTGGCTTTCAAATTCACAGGCCCAGG...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CAA 90 bp | TCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGATATCCCCACCTCCCAAAGCCGACCCAGTTCCATaGGAAGTAAAGTATGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SAFHTSSPISKRISPPPKADPVP*EVKYEV Trigger: TACTTCATACTTTACTTCCAATGGAACTGGGTCGGC...TTTGGGAGGTGGGGATATCCTCTTGGAGATGGGGGAAGAGGTATGAAATGCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
||
| CDS-3UTR CAA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCAGGTAGGGAAATTCAGTaGTATTGTGGTGACCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: SWESLRSQVCSTSLRVHPGREIQ*YCGDPY Trigger: ATATGGGTCACCACAATACAACTGAATTTCCCTACC...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| CDS-3UTR CAA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTGGTAGGGAAATTCAGTaGTATTGTGGTGACCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: PPLLGNLAKVTSTESWESGREIQ*YCGDPY Trigger: ATATGGGTCACCACAATACAACTGAATTTCCCTACC...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| CDS-3UTR CAA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCATTGTTCTGTTCTGTGTaGGCATACTGGTATTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SWESLRSQVCSTSLRVHPLFCSV*AYWYSG Trigger: TCCAGAATACCAGTATGCCAACACAGAACAGAACAA...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CAA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTCTGAGGATTCTGTTATaGGCCTTAACAATAGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PPLLGNLAKVTSTESWESLRILL*ALTIGV Trigger: CACTCCTATTGTTAAGGCCAATAACAGAATCCTCAG...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CAA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCACTGAGGATTCTGTTATaGGCCTTAACAATAGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SWESLRSQVCSTSLRVHPLRILL*ALTIGV Trigger: CACTCCTATTGTTAAGGCCAATAACAGAATCCTCAG...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS CCA 90 bp | GGATCTTCTGAATCCAGGACCACAATCTGCACTGCACACAGAGGATaGCATTTTTCTCCTTGCTGTAGCCAACTCAAGCATGTCTACATA | + |
|
Preference number: 5 (lower is better) Translates to: GSSESRTTICTAHRG*HFSPCCSQLKHVYI Trigger: TATGTAGACATGCTTGAGTTGGCTACAGCAAGGAGAAAAATGCCATCCTCTGTGTGCAGTGCAGATTGTGGTCCTGGATTCAGAAGATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086297.8 ENSMUST00000233390.2 |
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| CDS-3UTR CAA 90 bp | CCCCCACTTTTGGGAAATTTGGCTAAGGTTACCTCCACTGAGTCCTGGGAGTCTATTGGCCATGAGAAGTaGAATCTTGAGGAGAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PPLLGNLAKVTSTESWESIGHEK*NLEEKE Trigger: TTCTTTCTCCTCAAGATTCAACTTCTCATGGCCAAT...AGACTCCCAGGACTCAGTGGAGGTAACCTTAGCCAAATTTCCCAAAAGTGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CAA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCAATTGGCCATGAGAAGTaGAATCTTGAGGAGAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SWESLRSQVCSTSLRVHPIGHEK*NLEEKE Trigger: TTCTTTCTCCTCAAGATTCAACTTCTCATGGCCAAT...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
||
| CDS-3UTR CAA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCAAAACTGCTAGCCAGATaGCACACAGAATACATTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SWESLRSQVCSTSLRVHPKLLAR*HTEYIE Trigger: TTCAATGTATTCTGTGTGCAATCTGGCTAGCAGTTT...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CAA 90 bp | TCCTGGGAGTCTCTCAGATCTCAGGTCTGTAGTACTTCCTTAAGGGTCCACCCAGCAGTAACTGAGCCCTaGTTACATACAAGAATAATG | + |
|
Preference number: 5 (lower is better) Translates to: SWESLRSQVCSTSLRVHPAVTEP*LHTRIM Trigger: CATTATTCTTGTATGTAACAAGGGCTCAGTTACTGC...TGGGTGGACCCTTAAGGAAGTACTACAGACCTGAGATCTGAGAGACTCCCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CAA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGAATTGGCCATGAGAAGTaGAATCTTGAGGAGAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRIGHEK*NLEEKE Trigger: TTCTTTCTCCTCAAGATTCAACTTCTCATGGCCAAT...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CAA 90 bp | TCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGATATCCCCACCTCCCAAAATTGGCCATGAGAAGTaGAATCTTGAGGAGAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SAFHTSSPISKRISPPPKIGHEK*NLEEKE Trigger: TTCTTTCTCCTCAAGATTCAACTTCTCATGGCCAAT...TTTGGGAGGTGGGGATATCCTCTTGGAGATGGGGGAAGAGGTATGAAATGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CAA 90 bp | TCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGGATATCCCCACCTCCCAAAAAACTGCTAGCCAGATaGCACACAGAATACATTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SAFHTSSPISKRISPPPKKLLAR*HTEYIE Trigger: TTCAATGTATTCTGTGTGCAATCTGGCTAGCAGTTT...TTTGGGAGGTGGGGATATCCTCTTGGAGATGGGGGAAGAGGTATGAAATGCAGA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CAA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGAAAACTGCTAGCCAGATaGCACACAGAATACATTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRKLLAR*HTEYIE Trigger: TTCAATGTATTCTGTGTGCAATCTGGCTAGCAGTTT...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CAA 90 bp | CCAATTCACCCCCTGACTCTTCTGCATTTCATACCTCTTCCCCCATCTCCAAGAGCAGTAACTGAGCCCTaGTTACATACAAGAATAATG | + |
|
Preference number: 5 (lower is better) Translates to: PIHPLTLLHFIPLPPSPRAVTEP*LHTRIM Trigger: CATTATTCTTGTATGTAACAAGGGCTCAGTTACTGC...TCTTGGAGATGGGGGAAGAGGTATGAAATGCAGAAGAGTCAGGGGGTGAATTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS TCA 90 bp | TGCCAGGCAGGCCAAGTATCCCAGTACACAGTAGAATGCAGTAACTaGGCCCTTGTTACATACAAGAATAATGTTTCCATGCTCAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: CQAGQVSQYTVECSN*ALVTYKNNVSMLRM Trigger: CATTCTGAGCATGGAAACATTATTCTTGTATGTAACAAGGGCTCAGTTACTGCATTCTACTGTGTACTGGGATACTTGGCCTGCCTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CAA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTTTGTTCTGTTCTGTGTaGGCATACTGGTATTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSMRLRSIEQARHSGACLLFCSV*AYWYSG Trigger: TCCAGAATACCAGTATGCCAACACAGAACAGAACAA...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CAA 90 bp | CAGGTATCACCCTTCAATGGAGCCTCCAGTATGTCAAGAATTAGGCATATCTTCGCAGTAACTGAGCCCTaGTTACATACAAGAATAATG | + |
|
Preference number: 5 (lower is better) Translates to: QVSPFNGASSMSRIRHIFAVTEP*LHTRIM Trigger: CATTATTCTTGTATGTAACAAGGGCTCAGTTACTGC...GAAGATATGCCTAATTCTTGACATACTGGAGGCTCCATTGAAGGGTGATACCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS CCA 90 bp | TCATGGAGTGCATGGGCCATGGCATGCACAGCATTATATATGTTTTaGCTACCATCACTAAAGGTTATGTCAAACTTCTGTTCTATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SWSAWAMACTALYMF*LPSLKVMSNFCSIS Trigger: GCTAATAGAACAGAAGTTTGACATAACCTTTAGTGATGGTAGCCAAAACATATATAATGCTGTGCATGCCATGGCCCATGCACTCCATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| CDS-3UTR CAA 90 bp | TCCTCTATGAGATTAAGAAGTATTGAACAAGCCAGGCATAGTGGTGCATGCCTTAAACTGCTAGCCAGATaGCACACAGAATACATTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSMRLRSIEQARHSGACLKLLAR*HTEYIE Trigger: TTCAATGTATTCTGTGTGCAATCTGGCTAGCAGTTT...AAGGCATGCACCACTATGCCTGGCTTGTTCAATACTTCTTAATCTCATAGAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS TCA 90 bp | TTCTGTTCTGTGTTGGCATACTGGTATTCTGGACAATTCACACAGTaGTCCATATTTGTCTCATTAGAAATTTCATTTTCAGGGCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FCSVLAYWYSGQFTQ*SIFVSLEISFSGQG Trigger: CCCCTGCCCTGAAAATGAAATTTCTAATGAGACAAATATGGATCACTGTGTGAATTGTCCAGAATACCAGTATGCCAACACAGAACAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS TCA 90 bp | ACAGAGGATGGCATATGTGGAGATAAGAAAATGTCCAGGAACATCTaGAAATATAAAGATGTGGTCATATCGGGTCCTGTAAGCAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: TEDGICGDKKMSRNI*KYKDVVISGPVSRN Trigger: ATTTCTGCTTACAGGACCCGATATGACCACATCTTTATATTTTCAGATGTTCCTGGACATTTTCTTATCTCCACATATGCCATCCTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232789.2 ENSMUST00000233941.2 |
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| CDS-3UTR CAA 90 bp | GATTCTAAAACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAGCCGACCCAGTTCCATaGGAAGTAAAGTATGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: DSKTEYMHCNPVFGRYVPADPVP*EVKYEV Trigger: TACTTCATACTTTACTTCCAATGGAACTGGGTCGGC...TGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGTTTTAGAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| CDS TCA 90 bp | ATTTTTCTCCTTGCTGTAGCCAACTCAAGCATGTCTACATATAAGTaGAAGTATTCACCATGTGGAAAATATGGGCTGAACTTTCCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: IFLLAVANSSMSTYK*KYSPCGKYGLNFPN Trigger: GTTAGGAAAGTTCAGCCCATATTTTCCACATGGTGAATACTTTCACTTATATGTAGACATGCTTGAGTTGGCTACAGCAAGGAGAAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086297.8 ENSMUST00000233390.2 |
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| CDS-3UTR CAA 90 bp | GATTCTAAAACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAGGTAGGGAAATTCAGTaGTATTGTGGTGACCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: DSKTEYMHCNPVFGRYVPGREIQ*YCGDPY Trigger: ATATGGGTCACCACAATACAACTGAATTTCCCTACC...TGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGTTTTAGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| CDS-3UTR CAA 90 bp | GATTCTAAAACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCATTGTTCTGTTCTGTGTaGGCATACTGGTATTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DSKTEYMHCNPVFGRYVPLFCSV*AYWYSG Trigger: TCCAGAATACCAGTATGCCAACACAGAACAGAACAA...TGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGTTTTAGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CAA 90 bp | ACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAATTTCTCATCTGAGGATTCTGTTATaGGCCTTAACAATAGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TEYMHCNPVFGRYVPISHLRILL*ALTIGV Trigger: CACTCCTATTGTTAAGGCCAATAACAGAATCCTCAG...ATGAGAAATTGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS GCA 90 bp | ATTCAGAGTCTCCTTGAAATAATCTTTCTCCATAGGCATCTGAACTaGTCCAAGGATGAAGGAACAAGTTTGATCCAAATCTTTATCATT | + |
|
Preference number: 5 (lower is better) Translates to: IQSLLEIIFLHRHLN*SKDEGTSLIQIFII Trigger: AATGATAAAGATTTGGATCAAACTTGTTCCTTCATCCTTGGAGCAGTTCAGATGCCTATGGAGAAAGATTATTTCAAGGAGACTCTGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS GCA 90 bp | AATGCAGTAACTGAGCCCTTGTTACATACAAGAATAATGTTTCCATaGTCAGAATGTTCATCAATATCAACAAATGGAGGAGAAACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: NAVTEPLLHTRIMFP*SECSSISTNGGETA Trigger: AGCAGTTTCTCCTCCATTTGTTGATATTGATGAACATTCTGAGCATGGAAACATTATTCTTGTATGTAACAAGGGCTCAGTTACTGCATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS CCA 90 bp | TTAGAAATATCACAGCTTTCTGAATGCATTTGTTCTGTTCTGTGTTaGCATACTGGTATTCTGGACAATTCACACAGTGATCCATATTTG | + |
|
Preference number: 5 (lower is better) Translates to: LEISQLSECICSVLC*HTGILDNSHSDPYL Trigger: CAAATATGGATCACTGTGTGAATTGTCCAGAATACCAGTATGCCAACACAGAACAGAACAAATGCATTCAGAAAGCTGTGATATTTCTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CAA 90 bp | GATTCTAAAACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAATTGGCCATGAGAAGTaGAATCTTGAGGAGAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: DSKTEYMHCNPVFGRYVPIGHEK*NLEEKE Trigger: TTCTTTCTCCTCAAGATTCAACTTCTCATGGCCAAT...TGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGTTTTAGAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS-3UTR CAA 90 bp | GATTCTAAAACTGAATACATGCATTGTAACCCAGTATTTGGTAGGTATGTACCAAAACTGCTAGCCAGATaGCACACAGAATACATTGAA | + |
|
Preference number: 5 (lower is better) Translates to: DSKTEYMHCNPVFGRYVPKLLAR*HTEYIE Trigger: TTCAATGTATTCTGTGTGCAATCTGGCTAGCAGTTT...TGGTACATACCTACCAAATACTGGGTTACAATGCATGTATTCAGTTTTAGAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS GCA 90 bp | TTACAGTTACATGCTGAATCTTCACAGTTAAAGTACTTCCACTCTTaGATTTCTAGGTTTAAATCTGTGCTTTTGAGATGGAACAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: LQLHAESSQLKYFHS*ISRFKSVLLRWNNV Trigger: GACATTGTTCCATCTCAAAAGCACAGATTTAAACCTAGAAATGCAAGAGTGGAAGTACTTTAACTGTGAAGATTCAGCATGTAACTGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| CDS CCA 90 bp | TTTCTGAATGCATTTGTTCTGTTCTGTGTTGGCATACTGGTATTCTaGACAATTCACACAGTGATCCATATTTGTCTCATTAGAAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLNAFVLFCVGILVF*TIHTVIHICLIRNF Trigger: GAAATTTCTAATGAGACAAATATGGATCACTGTGTGAATTGTCCAGAATACCAGTATGCCAACACAGAACAGAACAAATGCATTCAGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS TCA 72 bp | AACAGCAGGCTGCCACTCTCTCCTTCCGGGATCTTCTaGATCCAGGACCACAATCTGCACTGCACACAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: NSRLPLSPSGIF*IQDHNLHCTQR Trigger: CCTCTGTGTGCAGTGCAGATTGTGGTCCTGGATTCAGAAGATCCCGGAAGGAGAGAGTGGCAGCCTGCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS GCA 72 bp | ATTTTCAGGGCAGGGGCTGCAAATGAAACAGCAGGCTaGCACTCTCTCCTTCCGGGATCTTCTGAATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: IFRAGAANETAG*HSLLPGSSESR Trigger: CCTGGATTCAGAAGATCCCGGAAGGAGAGAGTGGCAGCCTGCTGTTTCATTTGCAGCCCCTGCCCTGAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS TCA 72 bp | ATGCGTCAGGTAGATTCCTTGCCAAGAAAGCCACAGTaGAGCTTCCAAGTGCCAGGCAGGCCAAGTATCCCA | + |
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Preference number: 6 (lower is better) Translates to: MRQVDSLPRKPQ*SFQVPGRPSIP Trigger: TGGGATACTTGGCCTGCCTGGCACTTGGAAGCTTCACTGTGGCTTTCTTGGCAAGGAATCTACCTGACGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS TCA 72 bp | CATGGTGCTTCACAAACGCCCAAAGTACCAGAGCTGTaGATGCAGAGAAGCCAAAGGCCATTAAGGCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: HGASQTPKVPEL*MQRSQRPLRQE Trigger: CTCTTGCCTTAATGGCCTTTGGCTTCTCTGCATTCACAGCTCTGGTACTTTGGGCGTTTGTGAAGCACCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS GCA 72 bp | ATTCCTTGCCAAGAAAGCCACAGTGAAGCTTCCAAGTaGCAGGCAGGCCAAGTATCCCAGTACACAGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: IPCQESHSEASK*QAGQVSQYTVE Trigger: TTCTACTGTGTACTGGGATACTTGGCCTGCCTGGCACTTGGAAGCTTCACTGTGGCTTTCTTGGCAAGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS CCA 72 bp | GAATCCAGGACCACAATCTGCACTGCACACAGAGGATaGCATTTTTCTCCTTGCTGTAGCCAACTCAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: ESRTTICTAHRG*HFSPCCSQLKH Trigger: ATGCTTGAGTTGGCTACAGCAAGGAGAAAAATGCCATCCTCTGTGTGCAGTGCAGATTGTGGTCCTGGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086297.8 ENSMUST00000233390.2 |
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| CDS TCA 72 bp | GTAGATCTTGGGTGCAAAGATACATCCAAGAATCCCTaGACTGGATGCCAGGATGGAGAAAATCTCTACAGC | + |
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Preference number: 6 (lower is better) Translates to: VDLGCKDTSKNP*TGCQDGENLYS Trigger: GCTGTAGAGATTTTCTCCATCCTGGCATCCAGTTCAGGGATTCTTGGATGTATCTTTGCACCCAAGATCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS CCA 72 bp | CCTGTTGAAGATTTGTCTCATGGAGTGCATGGGCCATaGCATGCACAGCATTATATATGTTTTGGCTACCAT | + |
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Preference number: 6 (lower is better) Translates to: PVEDLSHGVHGP*HAQHYICFGYH Trigger: ATGGTAGCCAAAACATATATAATGCTGTGCATGCCATGGCCCATGCACTCCATGAGACAAATCTTCAACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| CDS GCA 72 bp | ATTCTGTTATTGGCCTTAACAATAGGAGTGTCATGGTaGTTCACAAACGCCCAAAGTACCAGAGCTGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: ILLLALTIGVSW*FTNAQSTRAVN Trigger: ATTCACAGCTCTGGTACTTTGGGCGTTTGTGAAGCACCATGACACTCCTATTGTTAAGGCCAATAACAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS TCA 72 bp | GTGATTTGCTGTAAGACACAGGTGACTCTGTTAGGATaGCCAATGAAGAAAAAGGTGCACAGAAAACAGAAC | + |
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Preference number: 6 (lower is better) Translates to: VICCKTQVTLLG*PMKKKVHRKQN Trigger: GTTCTGTTTTCTGTGCACCTTTTTCTTCATTGGTCATCCTAACAGAGTCACCTGTGTCTTACAGCAAATCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS TCA 72 bp | GGCCAAGTATCCCAGTACACAGTAGAATGCAGTAACTaGGCCCTTGTTACATACAAGAATAATGTTTCCATG | + |
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Preference number: 6 (lower is better) Translates to: GQVSQYTVECSN*ALVTYKNNVSM Trigger: CATGGAAACATTATTCTTGTATGTAACAAGGGCTCAGTTACTGCATTCTACTGTGTACTGGGATACTTGGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS CCA 72 bp | GCATGGGCCATGGCATGCACAGCATTATATATGTTTTaGCTACCATCACTAAAGGTTATGTCAAACTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: AWAMACTALYMF*LPSLKVMSNFC Trigger: ACAGAAGTTTGACATAACCTTTAGTGATGGTAGCCAAAACATATATAATGCTGTGCATGCCATGGCCCATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| CDS TCA 72 bp | CTTGCTGTAGCCAACTCAAGCATGTCTACATATAAGTaGAAGTATTCACCATGTGGAAAATATGGGCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: LAVANSSMSTYK*KYSPCGKYGLN Trigger: GTTCAGCCCATATTTTCCACATGGTGAATACTTTCACTTATATGTAGACATGCTTGAGTTGGCTACAGCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086297.8 ENSMUST00000233390.2 |
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| CDS CAA 90 bp | ATAATTTTCCATTGTCTATTGCCTGATTATCAACCTGTTGAAGATTaGTCTCATGGAGTGCATGGGCCATGGCATGCACAGCATTATATA | + |
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Preference number: 6 (lower is better) Translates to: IIFHCLLPDYQPVED*SHGVHGPWHAQHYI Trigger: TATATAATGCTGTGCATGCCATGGCCCATGCACTCCATGAGACAAATCTTCAACAGGTTGATAATCAGGCAATAGACAATGGAAAATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| CDS TCA 72 bp | GGCATATGTGGAGATAAGAAAATGTCCAGGAACATCTaGAAATATAAAGATGTGGTCATATCGGGTCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: GICGDKKMSRNI*KYKDVVISGPV Trigger: TACAGGACCCGATATGACCACATCTTTATATTTTCAGATGTTCCTGGACATTTTCTTATCTCCACATATGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232789.2 ENSMUST00000233941.2 |
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| CDS CCA 72 bp | GCATTTGTTCTGTTCTGTGTTGGCATACTGGTATTCTaGACAATTCACACAGTGATCCATATTTGTCTCATT | + |
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Preference number: 6 (lower is better) Translates to: AFVLFCVGILVF*TIHTVIHICLI Trigger: AATGAGACAAATATGGATCACTGTGTGAATTGTCCAGAATACCAGTATGCCAACACAGAACAGAACAAATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS CAA 72 bp | CAATATCAACAAATGGAGGAGAAACTGCTAGCCAGATaGCACACAGAATACATTGAAATAGGGAACATATGG | + |
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Preference number: 6 (lower is better) Translates to: QYQQMEEKLLAR*HTEYIEIGNIW Trigger: CCATATGTTCCCTATTTCAATGTATTCTGTGTGCAATCTGGCTAGCAGTTTCTCCTCCATTTGTTGATATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS TCA 72 bp | AGGAAATGTGGAGATAAGAAAATGTCCAGGAACATCTaGAAATATAAAGATGTGGTCATATCGGGTCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: RKCGDKKMSRNI*KYKDVVISGPV Trigger: TACAGGACCCGATATGACCACATCTTTATATTTTCAGATGTTCCTGGACATTTTCTTATCTCCACATTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| CDS GCA 72 bp | CATGCTGAATCTTCACAGTTAAAGTACTTCCACTCTTaGATTTCTAGGTTTAAATCTGTGCTTTTGAGATGG | + |
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Preference number: 6 (lower is better) Translates to: HAESSQLKYFHS*ISRFKSVLLRW Trigger: CCATCTCAAAAGCACAGATTTAAACCTAGAAATGCAAGAGTGGAAGTACTTTAACTGTGAAGATTCAGCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| CDS GCA 72 bp | ACTGAGCCCTTGTTACATACAAGAATAATGTTTCCATaGTCAGAATGTTCATCAATATCAACAAATGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: TEPLLHTRIMFP*SECSSISTNGG Trigger: TCCTCCATTTGTTGATATTGATGAACATTCTGAGCATGGAAACATTATTCTTGTATGTAACAAGGGCTCAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS TCA 72 bp | TCAAAGACATATTTGGTAAAAGATCAGGATTTCTGTTaGTTTCATCCATTGAAAACGCCAATGCCAAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: SKTYLVKDQDFC*FHPLKTPMPKH Trigger: ATGCTTTGGCATTGGCGTTTTCAATGGATGAAATCAACAGAAATCCTGATCTTTTACCAAATATGTCTTTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000086297.8 ENSMUST00000232789.2 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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| CDS TCA 72 bp | TCCACTCTTGCATTTCTAGGTTTAAATCTGTGCTTTTaGGATGGAACAATGTCTGTACAAACTTTTTATAGC | + |
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Preference number: 6 (lower is better) Translates to: STLAFLGLNLCF*DGTMSVQTFYS Trigger: GCTATAAAAAGTTTGTACAGACATTGTTCCATCTCAAAAGCACAGATTTAAACCTAGAAATGCAAGAGTGGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086297.8 ENSMUST00000233239.2 ENSMUST00000233390.2 ENSMUST00000233742.2 |
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| CDS TCA 72 bp | GTGTTGGCATACTGGTATTCTGGACAATTCACACAGTaGTCCATATTTGTCTCATTAGAAATTTCATTTTCA | + |
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Preference number: 6 (lower is better) Translates to: VLAYWYSGQFTQ*SIFVSLEISFS Trigger: TGAAAATGAAATTTCTAATGAGACAAATATGGATCACTGTGTGAATTGTCCAGAATACCAGTATGCCAACAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086297.8 ENSMUST00000233742.2 ENSMUST00000233941.2 |
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