Pregenerated sensors for VMN2R27 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072778Ensembl transcript IDs: ENSMUST00000100968.4, ENSMUST00000233936.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCACATGGTCTAGGATGCATGACTCCAAGACTCTCCATGTCCTGTTaGAGCCCTGACCTTATACTTCTTCTCCATGCTCACATGTACCAT | + |
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Preference number: 1 (lower is better) Translates to: PHGLGCMTPRLSMSC*SPDLILLLHAHMYH Trigger: ATGGTACATGTGAGCATGGAGAAGAAGTATAAGGTCAGGGCTTCAACAGGACATGGAGAGTCTTGGAGTCATGCATCCTAGACCATGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| 3UTR TCA 90 bp | GAAAATAGATTCCAATGGGTGGAAATAAGGTCAGCTTTCACTATGTaGAGACAATTTGAAACTCCTCACTCTAATAGAGAAAAGCACTTC | + |
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Preference number: 1 (lower is better) Translates to: ENRFQWVEIRSAFTM*RQFETPHSNREKHF Trigger: GAAGTGCTTTTCTCTATTAGAGTGAGGAGTTTCAAATTGTCTTCACATAGTGAAAGCTGACCTTATTTCCACCCATTGGAATCTATTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| 3UTR CAA 90 bp | GTCCAATGGGCCTCTCTTTGCAGTGATGGCCAACTAGGCCATCTTTaGATACATATGCAGCTAAAGACAAGAGTTCCCGGGTACTGGTTA | + |
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Preference number: 2 (lower is better) Translates to: VQWASLCSDGQLGHL*IHMQLKTRVPGYWL Trigger: TAACCAGTACCCGGGAACTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTTGGCCATCACTGCAAAGAGAGGCCCATTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
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| 3UTR CAA 90 bp | GAGCCCCAAACCCTCCTAAGACTGAAATTTACAAGCCACATTGTCTaGTTGGTGAGGCCCTTCAGAAGGGAGAAGCAGACCATAAAATTA | + |
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Preference number: 2 (lower is better) Translates to: EPQTLLRLKFTSHIV*LVRPFRREKQTIKL Trigger: TAATTTTATGGTCTGCTTCTCCCTTCTGAAGGGCCTCACCAACAAGACAATGTGGCTTGTAAATTTCAGTCTTAGGAGGGTTTGGGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| 3UTR-3UTR CCA 90 bp | TTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCATTAGGGGCTGAGACTTTAGTGTGTTaGATACCTCAAAGTAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: LQVPLAPWVISLAPPLGAETLVC*IPQSKD Trigger: ATCTTTACTTTGAGGTATCCAACACACTAAAGTCTC...AGCCCCTAATGGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| 3UTR-3UTR TCA 90 bp | CAATTTGAAACTCCTCACTCTAATAGAGAAAAGCACTTCCCATGTGGACTATTTTCTGTGTTTCCACTATaGCTCTTCCTAAGCCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: QFETPHSNREKHFPCGLFSVFPL*LFLSPH Trigger: ATGAGGGCTTAGGAAGAGTCATAGTGGAAACACAGA...AAATAGTCCACATGGGAAGTGCTTTTCTCTATTAGAGTGAGGAGTTTCAAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| 3UTR-3UTR GCA 90 bp | GGTCATGTGTCCATTTCTGAGCTTGTTTTTCTTGTTGTTGTTGTTGTTTTTGTTGGAGCATATAAAGTTTaGAAGTCCAATGGGCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: GHVSISELVFLVVVVVFVGAYKV*KSNGPL Trigger: GAGAGGCCCATTGGACTTGCAAACTTTATATGCTCC...AACAAAAACAACAACAACAACAAGAAAAACAAGCTCAGAAATGGACACATGACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
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| 3UTR GCA 72 bp | GCCCTGGCGTTCCCCTGTACTGGAGCATATAAAGTTTaGAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCC | + |
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Preference number: 3 (lower is better) Translates to: ALAFPCTGAYKV*KSNGPLFAVMA Trigger: GGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCTCCAGTACAGGGGAACGCCAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
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| 3UTR TCA 72 bp | CTAGGATGCATGACTCCAAGACTCTCCATGTCCTGTTaGAGCCCTGACCTTATACTTCTTCTCCATGCTCAC | + |
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Preference number: 3 (lower is better) Translates to: LGCMTPRLSMSC*SPDLILLLHAH Trigger: GTGAGCATGGAGAAGAAGTATAAGGTCAGGGCTTCAACAGGACATGGAGAGTCTTGGAGTCATGCATCCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| 3UTR-3UTR CAA 90 bp | TTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCATTAGGGGCTAAGCCCTCATCCATTTaGTTTCACCTGAACATAGAG | + |
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Preference number: 3 (lower is better) Translates to: LQVPLAPWVISLAPPLGAKPSSI*FHLNIE Trigger: CTCTATGTTCAGGTGAAACAAAATGGATGAGGGCTT...AGCCCCTAATGGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| 3UTR-3UTR CAA 90 bp | CTGGAGACTTTAGTGTGTTGGATACCTCAAAGTAAAGATGTCTGTGTTTCCACTACAAGCCACATTGTCTaGTTGGTGAGGCCCTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: LETLVCWIPQSKDVCVSTTSHIV*LVRPFR Trigger: TCTGAAGGGCCTCACCAACAAGACAATGTGGCTTGT...AGTGGAAACACAGACATCTTTACTTTGAGGTATCCAACACACTAAAGTCTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| 3UTR TCA 72 bp | ATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCAGTaGTGGCCAACTAGGCCATCTTTTGATACATATGCA | + |
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Preference number: 3 (lower is better) Translates to: IKFASPMGLSLQ*WPTRPSFDTYA Trigger: TGCATATGTATCAAAAGATGGCCTAGTTGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAAACTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
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| 3UTR TCA 72 bp | ACTTCTGTGTTTTCTGAGCTTGTTTTTGACCATGGTTaGGCAGTGGTTCCTCTCAATGTTGTAAGTTCCAAC | + |
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Preference number: 3 (lower is better) Translates to: TSVFSELVFDHG*AVVPLNVVSSN Trigger: GTTGGAACTTACAACATTGAGAGGAACCACTGCTCAACCATGGTCAAAAACAAGCTCAGAAAACACAGAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| 3UTR CCA 72 bp | GTGGACTATTTGCTCTGTCTGGAGACTTTAGTGTGTTaGATACCTCAAAGTAAAGATGTCTGTGTTTCCACT | + |
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Preference number: 3 (lower is better) Translates to: VDYLLCLETLVC*IPQSKDVCVST Trigger: AGTGGAAACACAGACATCTTTACTTTGAGGTATCCAACACACTAAAGTCTCCAGACAGAGCAAATAGTCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| 3UTR TCA 72 bp | TTCCAATGGGTGGAAATAAGGTCAGCTTTCACTATGTaGAGACAATTTGAAACTCCTCACTCTAATAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: FQWVEIRSAFTM*RQFETPHSNRE Trigger: TTCTCTATTAGAGTGAGGAGTTTCAAATTGTCTTCACATAGTGAAAGCTGACCTTATTTCCACCCATTGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| 3UTR TCA 72 bp | TGTTCTTATGATGGAACTATGTCCAATATTACACTGTaGAAACAGTCTCTGGAGTTAAAAACTATGACCTAC | + |
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Preference number: 3 (lower is better) Translates to: CSYDGTMSNITL*KQSLELKTMTY Trigger: GTAGGTCATAGTTTTTAACTCCAGAGACTGTTTTCACAGTGTAATATTGGACATAGTTCCATCATAAGAACA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
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| CDS-3UTR CCA 90 bp | CAATGGGCCTCTCTTTGCAGTGATGGCCAACTAGGCCATCTTTTGATACATATGTGGATGGAGCTTCCATaGGAGAGGAGCCCGGAGTAC | + |
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Preference number: 4 (lower is better) Translates to: QWASLCSDGQLGHLLIHMWMELP*ERSPEY Trigger: GTACTCCGGGCTCCTCTCCCATGGAAGCTCCATCCA...CATATGTATCAAAAGATGGCCTAGTTGGCCATCACTGCAAAGAGAGGCCCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
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| CDS-3UTR TCA 90 bp | CAATGGGCCTCTCTTTGCAGTGATGGCCAACTAGGCCATCTTTTGATACATATGTCCTTCCACTCTGACTaGCAGCTCCACATGGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: QWASLCSDGQLGHLLIHMSFHSD*QLHMEC Trigger: GCACTCCATGTGGAGCTGTCAGTCAGAGTGGAAGGA...CATATGTATCAAAAGATGGCCTAGTTGGCCATCACTGCAAAGAGAGGCCCATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
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| CDS-3UTR CCA 90 bp | AGAGAAGAGCCCCAAACCCTCCTAAGACTGAAATTTACAAGCCACATTGTCTTGTGGATGGAGCTTCCATaGGAGAGGAGCCCGGAGTAC | + |
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Preference number: 4 (lower is better) Translates to: REEPQTLLRLKFTSHIVLWMELP*ERSPEY Trigger: GTACTCCGGGCTCCTCTCCCATGGAAGCTCCATCCA...CAAGACAATGTGGCTTGTAAATTTCAGTCTTAGGAGGGTTTGGGGCTCTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR TCA 90 bp | ACCTATAGGGTTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCTGGTGGTCTCTCTCCTaGGATCAACACCATACAACT | + |
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Preference number: 4 (lower is better) Translates to: TYRVAGPFSSLGNFSSSSWWSLS*DQHHTT Trigger: AGTTGTATGGTGTTGATCTCAGGAGAGAGACCACCA...GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAACCCTATAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| 3UTR CAA 72 bp | GCCTCTCTTTGCAGTGATGGCCAACTAGGCCATCTTTaGATACATATGCAGCTAAAGACAAGAGTTCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: ASLCSDGQLGHL*IHMQLKTRVPG Trigger: CCCGGGAACTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTTGGCCATCACTGCAAAGAGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
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| CDS-3UTR CCA 90 bp | ACCTATAGGGTTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCTGCAAATTCTCCATCTaGACATGGGGCACAATCGTA | + |
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Preference number: 4 (lower is better) Translates to: TYRVAGPFSSLGNFSSSSCKFSI*TWGTIV Trigger: TACGATTGTGCCCCATGTCCAGATGGAGAATTTGCA...GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAACCCTATAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS-3UTR TCA 90 bp | TTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCATTAGGGGCTTGCTCATTTGGATACTaGTCTTCAGGACACTTGATG | + |
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Preference number: 4 (lower is better) Translates to: LQVPLAPWVISLAPPLGACSFGY*SSGHLM Trigger: CATCAAGTGTCCTGAAGATCAGTATCCAAATGAGCA...AGCCCCTAATGGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR TCA 90 bp | TTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCATTAGGGGCTCGTTATACCAGAGGATaGTTTGACCAAACTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: LQVPLAPWVISLAPPLGARYTRG*FDQTLS Trigger: ACTCAGAGTTTGGTCAAATCATCCTCTGGTATAACG...AGCCCCTAATGGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR GCA 90 bp | CAATGGGCCTCTCTTTGCAGTGATGGCCAACTAGGCCATCTTTTGATACATATGGAGCTGGACTCTGCTTaGAAGACTCTGATCAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: QWASLCSDGQLGHLLIHMELDSA*KTLIKR Trigger: CCTTTTGATCAGAGTCTTGCAAGCAGAGTCCAGCTC...CATATGTATCAAAAGATGGCCTAGTTGGCCATCACTGCAAAGAGAGGCCCATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
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| CDS-3UTR GCA 90 bp | ACCTATAGGGTTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCACTCCGTACTGCAAATaGAATACAAAGTCCGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: TYRVAGPFSSLGNFSSSSTPYCK*NTKSVL Trigger: AAGCACGGACTTTGTATTGCATTTGCAGTACGGAGT...GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAACCCTATAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS-3UTR GCA 90 bp | ACCTATAGGGTTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCAGTCTTTGCCAAGACTaGAGAAAGGGCAACAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: TYRVAGPFSSLGNFSSSSSLCQD*RKGNRK Trigger: TTTTCTGTTGCCCTTTCTGCAGTCTTGGCAAAGACT...GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAACCCTATAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR CCA 90 bp | ACCTATAGGGTTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCTTTTGTAAGAATGGATaGAGCTTCCATGGGAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: TYRVAGPFSSLGNFSSSSFCKNG*SFHGRG Trigger: TCCTCTCCCATGGAAGCTCCATCCATTCTTACAAAA...GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAACCCTATAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS-3UTR CCA 90 bp | AGCCACATTGTCTTGTTGGTGAGGCCCTTCAGAAGGGAGAAGCAGACCATAAAATTCTCCATCTGGACATaGGGCACAATCGTAACAACA | + |
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Preference number: 4 (lower is better) Translates to: SHIVLLVRPFRREKQTIKFSIWT*GTIVTT Trigger: TGTTGTTACGATTGTGCCCCATGTCCAGATGGAGAA...TTTTATGGTCTGCTTCTCCCTTCTGAAGGGCCTCACCAACAAGACAATGTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR TCA 90 bp | ACCTATAGGGTTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCTACACCTTTATCAAATaGATCTCCTTCCACTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: TYRVAGPFSSLGNFSSSSYTFIK*ISFHSD Trigger: GTCAGAGTGGAAGGAGATTCATTTGATAAAGGTGTA...GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAACCCTATAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS-3UTR TCA 90 bp | CAATGGGCCTCTCTTTGCAGTGATGGCCAACTAGGCCATCTTTTGATACATATGCCAAGTGGACAGGTTTaGCTGCAAACATGTAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: QWASLCSDGQLGHLLIHMPSGQV*LQTCKA Trigger: TGCTTTACATGTTTGCAGTCAAACCTGTCCACTTGG...CATATGTATCAAAAGATGGCCTAGTTGGCCATCACTGCAAAGAGAGGCCCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
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| CDS-3UTR TCA 90 bp | CACATTGTCTTGTTGGTGAGGCCCTTCAGAAGGGAGAAGCAGACCATAAAATTAGCAGACTATAGCATTTaGGATTTGGGTCGCCATCCT | + |
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Preference number: 4 (lower is better) Translates to: HIVLLVRPFRREKQTIKLADYSI*DLGRHP Trigger: AGGATGGCGACCCAAATCTCAAATGCTATAGTCTGC...TAATTTTATGGTCTGCTTCTCCCTTCTGAAGGGCCTCACCAACAAGACAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR TCA 90 bp | AGCCACATTGTCTTGTTGGTGAGGCCCTTCAGAAGGGAGAAGCAGACCATAAAATTGTTTTTGCCTCATTaGAGCTGTCAGGTAGACTTC | + |
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Preference number: 4 (lower is better) Translates to: SHIVLLVRPFRREKQTIKLFLPH*SCQVDF Trigger: GAAGTCTACCTGACAGCTTCAATGAGGCAAAAACAA...TTTTATGGTCTGCTTCTCCCTTCTGAAGGGCCTCACCAACAAGACAATGTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR GCA 90 bp | AGCCACATTGTCTTGTTGGTGAGGCCCTTCAGAAGGGAGAAGCAGACCATAAAAACTCCGTACTGCAAATaGAATACAAAGTCCGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: SHIVLLVRPFRREKQTIKTPYCK*NTKSVL Trigger: AAGCACGGACTTTGTATTGCATTTGCAGTACGGAGT...TTTTATGGTCTGCTTCTCCCTTCTGAAGGGCCTCACCAACAAGACAATGTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR GCA 90 bp | CACATTGTCTTGTTGGTGAGGCCCTTCAGAAGGGAGAAGCAGACCATAAAATTAGCAATACAAAGTCCGTaGTTGGTCATGTCTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: HIVLLVRPFRREKQTIKLAIQSP*LVMSSV Trigger: CACAGAAGACATGACCAAGCACGGACTTTGTATTGC...TAATTTTATGGTCTGCTTCTCCCTTCTGAAGGGCCTCACCAACAAGACAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR GCA 90 bp | AGAGAAGAGCCCCAAACCCTCCTAAGACTGAAATTTACAAGCCACATTGTCTTGCACAATGAAAGTCTTTaGCAAGACTGCAGAAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: REEPQTLLRLKFTSHIVLHNESL*QDCRKG Trigger: GCCCTTTCTGCAGTCTTGGCAAAGACTTTCATTGTG...CAAGACAATGTGGCTTGTAAATTTCAGTCTTAGGAGGGTTTGGGGCTCTTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR CCA 90 bp | ACCTATAGGGTTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCAAAGCAGACATATTGTaGTATTCACCCCACCTTATA | + |
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Preference number: 4 (lower is better) Translates to: TYRVAGPFSSLGNFSSSSKADIL*YSPHLI Trigger: TATAAGGTGGGGTGAATACCACAATATGTCTGCTTT...GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAACCCTATAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS-3UTR CCA 90 bp | TTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCATTAGGGGCTATTTCTCTGCTCATTTaGATACTGATCTTCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: LQVPLAPWVISLAPPLGAISLLI*ILIFRT Trigger: TGTCCTGAAGATCAGTATCCAAATGAGCAGAGAAAT...AGCCCCTAATGGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR TCA 90 bp | CTTTCACTATGTGAAGACAATTTGAAACTCCTCACTCTAATAGAGAAAAGCACTTCCTTCCACTCTGACTaGCAGCTCCACATGGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: LSLCEDNLKLLTLIEKSTSFHSD*QLHMEC Trigger: GCACTCCATGTGGAGCTGTCAGTCAGAGTGGAAGGA...AGTGCTTTTCTCTATTAGAGTGAGGAGTTTCAAATTGTCTTCACATAGTGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR TCA 90 bp | AGAAGAGCCCCAAACCCTCCTAAGACTGAAATTTACAAGCCACATTGTCTTGTTGTCAAGTTTGGTTGCTaGACCCTCCTTGTTCACAAT | + |
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Preference number: 4 (lower is better) Translates to: RRAPNPPKTEIYKPHCLVVKFGC*TLLVHN Trigger: ATTGTGAACAAGGAGGGTTCAGCAACCAAACTTGAC...AACAAGACAATGTGGCTTGTAAATTTCAGTCTTAGGAGGGTTTGGGGCTCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR TCA 90 bp | AGAAGAGCCCCAAACCCTCCTAAGACTGAAATTTACAAGCCACATTGTCTTGTTTACCAGAGGATGATTTaGCCAAACTCTGAGTGCATG | + |
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Preference number: 4 (lower is better) Translates to: RRAPNPPKTEIYKPHCLVYQRMI*PNSECM Trigger: CATGCACTCAGAGTTTGGTCAAATCATCCTCTGGTA...AACAAGACAATGTGGCTTGTAAATTTCAGTCTTAGGAGGGTTTGGGGCTCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR CCA 90 bp | AGAGAAGAGCCCCAAACCCTCCTAAGACTGAAATTTACAAGCCACATTGTCTTGTTTGCTAAATCCAAGTaGACAGGTTTGACTGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: REEPQTLLRLKFTSHIVLFAKSK*TGLTAN Trigger: GTTTGCAGTCAAACCTGTCCACTTGGATTTAGCAAA...CAAGACAATGTGGCTTGTAAATTTCAGTCTTAGGAGGGTTTGGGGCTCTTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR CCA 90 bp | GACAATTTGAAACTCCTCACTCTAATAGAGAAAAGCACTTCCCATGTGGACTATAATAGAAGGCAAGGGTaGACCCCTCGTTATACCAGA | + |
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Preference number: 4 (lower is better) Translates to: DNLKLLTLIEKSTSHVDYNRRQG*TPRYTR Trigger: TCTGGTATAACGAGGGGTCCACCCTTGCCTTCTATT...ATAGTCCACATGGGAAGTGCTTTTCTCTATTAGAGTGAGGAGTTTCAAATTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR TCA 90 bp | GTTCTTATGATGGAACTATGTCCAATATTACACTGTGAAAACAGTCTCTGGAGTTGGTGGTCTCTCTCCTaGGATCAACACCATACAACT | + |
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Preference number: 4 (lower is better) Translates to: VLMMELCPILHCENSLWSWWSLS*DQHHTT Trigger: AGTTGTATGGTGTTGATCTCAGGAGAGAGACCACCA...ACTCCAGAGACTGTTTTCACAGTGTAATATTGGACATAGTTCCATCATAAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
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| CDS-3UTR TCA 90 bp | CTGGAGACTTTAGTGTGTTGGATACCTCAAAGTAAAGATGTCTGTGTTTCCACTAGCTGTTATTGCTTTTaGATAGCCTCCTATCACTGC | + |
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Preference number: 4 (lower is better) Translates to: LETLVCWIPQSKDVCVSTSCYCF*IASYHC Trigger: GCAGTGATAGGAGGCTATTCAAAAGCAATAACAGCT...AGTGGAAACACAGACATCTTTACTTTGAGGTATCCAACACACTAAAGTCTCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR TCA 90 bp | GACAATTTGAAACTCCTCACTCTAATAGAGAAAAGCACTTCCCATGTGGACTATCCAAGTGGACAGGTTTaGCTGCAAACATGTAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DNLKLLTLIEKSTSHVDYPSGQV*LQTCKA Trigger: TGCTTTACATGTTTGCAGTCAAACCTGTCCACTTGG...ATAGTCCACATGGGAAGTGCTTTTCTCTATTAGAGTGAGGAGTTTCAAATTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS-3UTR GCA 90 bp | CAATTTGAAACTCCTCACTCTAATAGAGAAAAGCACTTCCCATGTGGACTATTTGAGCTGGACTCTGCTTaGAAGACTCTGATCAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QFETPHSNREKHFPCGLFELDSA*KTLIKR Trigger: CCTTTTGATCAGAGTCTTGCAAGCAGAGTCCAGCTC...AAATAGTCCACATGGGAAGTGCTTTTCTCTATTAGAGTGAGGAGTTTCAAATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS-3UTR GCA 90 bp | CTGGAGACTTTAGTGTGTTGGATACCTCAAAGTAAAGATGTCTGTGTTTCCACTGTGGACAGGTTTGACTaGAAACATGTAAAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LETLVCWIPQSKDVCVSTVDRFD*KHVKQT Trigger: TGTCTGCTTTACATGTTTGCAGTCAAACCTGTCCAC...AGTGGAAACACAGACATCTTTACTTTGAGGTATCCAACACACTAAAGTCTCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS-3UTR GCA 90 bp | CAGTCTCTGGAGTTAAAAACTATGACCTACTTTGGTCATGTGTCCATTTCTGAGGTGGACAGGTTTGACTaGAAACATGTAAAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: QSLELKTMTYFGHVSISEVDRFD*KHVKQT Trigger: TGTCTGCTTTACATGTTTGCAGTCAAACCTGTCCAC...CTCAGAAATGGACACATGACCAAAGTAGGTCATAGTTTTTAACTCCAGAGACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
||
| CDS-3UTR GCA 90 bp | CTGGAGACTTTAGTGTGTTGGATACCTCAAAGTAAAGATGTCTGTGTTTCCACTGAAAGTGATTGTTTTTaGCTCATTGAAGCTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LETLVCWIPQSKDVCVSTESDCF*LIEAVR Trigger: CCTGACAGCTTCAATGAGGCAAAAACAATCACTTTC...AGTGGAAACACAGACATCTTTACTTTGAGGTATCCAACACACTAAAGTCTCCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS-3UTR CCA 90 bp | GTTCTTATGATGGAACTATGTCCAATATTACACTGTGAAAACAGTCTCTGGAGTTTCTCCATCTGGACATaGGGCACAATCGTAACAACA | + |
|
Preference number: 4 (lower is better) Translates to: VLMMELCPILHCENSLWSFSIWT*GTIVTT Trigger: TGTTGTTACGATTGTGCCCCATGTCCAGATGGAGAA...ACTCCAGAGACTGTTTTCACAGTGTAATATTGGACATAGTTCCATCATAAGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGTTGGATACCTCAAAGTAAAGATGTCTGTGTTTCCACTATGACTCTTCCTTTTCCTGGAATGAAATaGGAACAATCACTAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VCWIPQSKDVCVSTMTLPFPGMK*EQSLER Trigger: TCTCTCTAGTGATTGTTCTCATTTCATTCCAGGAAA...AGGAAGAGTCATAGTGGAAACACAGACATCTTTACTTTGAGGTATCCAACACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS-3UTR TCA 90 bp | GTGTGTTGGATACCTCAAAGTAAAGATGTCTGTGTTTCCACTATGACTCTTCCTGGATATTTTCTAGGTTaGAGATTTCTGAGAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: VCWIPQSKDVCVSTMTLPGYFLG*RFLRNS Trigger: GGAGTTTCTCAGAAATCTTCAACCTAGAAAATATCC...AGGAAGAGTCATAGTGGAAACACAGACATCTTTACTTTGAGGTATCCAACACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS-3UTR TCA 90 bp | TACTTTGGTCATGTGTCCATTTCTGAGCTTGTTTTTCTTGTTGTTGTTGTTGTTGTCAAGTTTGGTTGCTaGACCCTCCTTGTTCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: YFGHVSISELVFLVVVVVVKFGC*TLLVHN Trigger: ATTGTGAACAAGGAGGGTTCAGCAACCAAACTTGAC...AACAACAACAACAACAAGAAAAACAAGCTCAGAAATGGACACATGACCAAAGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
||
| CDS-3UTR TCA 90 bp | GGTCATGTGTCCATTTCTGAGCTTGTTTTTCTTGTTGTTGTTGTTGTTTTTGTTGTTTTTGACCATGGTTaGGCAGTGGTTCCTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GHVSISELVFLVVVVVFVVFDHG*AVVPLN Trigger: ATTGAGAGGAACCACTGCTCAACCATGGTCAAAAAC...AACAAAAACAACAACAACAACAAGAAAAACAAGCTCAGAAATGGACACATGACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTTATGATGGAACTATGTCCAATATTACACTGTGAAAACAGTCTCTGGAGTTTTTGTAAGAATGGATaGAGCTTCCATGGGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLMMELCPILHCENSLWSFCKNG*SFHGRG Trigger: TCCTCTCCCATGGAAGCTCCATCCATTCTTACAAAA...ACTCCAGAGACTGTTTTCACAGTGTAATATTGGACATAGTTCCATCATAAGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
||
| CDS-3UTR CCA 90 bp | CAATTTGAAACTCCTCACTCTAATAGAGAAAAGCACTTCCCATGTGGACTATTTGAGAGTCTCACGAACTaGCCATTTTGTAAGAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: QFETPHSNREKHFPCGLFESLTN*PFCKNG Trigger: TCCATTCTTACAAAATGGCCAGTTCGTGAGACTCTC...AAATAGTCCACATGGGAAGTGCTTTTCTCTATTAGAGTGAGGAGTTTCAAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS-3UTR CCA 90 bp | CAGTCTCTGGAGTTAAAAACTATGACCTACTTTGGTCATGTGTCCATTTCTGAGAAAGCAGACATATTGTaGTATTCACCCCACCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: QSLELKTMTYFGHVSISEKADIL*YSPHLI Trigger: TATAAGGTGGGGTGAATACCACAATATGTCTGCTTT...CTCAGAAATGGACACATGACCAAAGTAGGTCATAGTTTTTAACTCCAGAGACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
||
| CDS-3UTR TCA 90 bp | GACAATTTGAAACTCCTCACTCTAATAGAGAAAAGCACTTCCCATGTGGACTATGGACACTTGATGCATTaGTCCATATCTGTTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: DNLKLLTLIEKSTSHVDYGHLMH*SISVSF Trigger: AAATGAAACAGATATGGATCAATGCATCAAGTGTCC...ATAGTCCACATGGGAAGTGCTTTTCTCTATTAGAGTGAGGAGTTTCAAATTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS-3UTR TCA 90 bp | CTTTCACTATGTGAAGACAATTTGAAACTCCTCACTCTAATAGAGAAAAGCACTTACACCTTTATCAAATaGATCTCCTTCCACTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLCEDNLKLLTLIEKSTYTFIK*ISFHSD Trigger: GTCAGAGTGGAAGGAGATTCATTTGATAAAGGTGTA...AGTGCTTTTCTCTATTAGAGTGAGGAGTTTCAAATTGTCTTCACATAGTGAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS-3UTR CCA 90 bp | GGTCATGTGTCCATTTCTGAGCTTGTTTTTCTTGTTGTTGTTGTTGTTTTTGTTTTTGCTAAATCCAAGTaGACAGGTTTGACTGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GHVSISELVFLVVVVVFVFAKSK*TGLTAN Trigger: GTTTGCAGTCAAACCTGTCCACTTGGATTTAGCAAA...AACAAAAACAACAACAACAACAAGAAAAACAAGCTCAGAAATGGACACATGACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
||
| CDS-3UTR CCA 90 bp | CAATTTGAAACTCCTCACTCTAATAGAGAAAAGCACTTCCCATGTGGACTATTTCCCAGAGTATCTTCATaGGACAAAAATGCTGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: QFETPHSNREKHFPCGLFPRVSS*DKNAVI Trigger: AATTACAGCATTTTTGTCCCATGAAGATACTCTGGG...AAATAGTCCACATGGGAAGTGCTTTTCTCTATTAGAGTGAGGAGTTTCAAATTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS-3UTR TCA 90 bp | GGTCATGTGTCCATTTCTGAGCTTGTTTTTCTTGTTGTTGTTGTTGTTTTTGTTTTTCCTGGAATGAAATaGGAACAATCACTAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GHVSISELVFLVVVVVFVFPGMK*EQSLER Trigger: TCTCTCTAGTGATTGTTCTCATTTCATTCCAGGAAA...AACAAAAACAACAACAACAACAAGAAAAACAAGCTCAGAAATGGACACATGACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
||
| CDS-3UTR TCA 90 bp | TACTTTGGTCATGTGTCCATTTCTGAGCTTGTTTTTCTTGTTGTTGTTGTTGTTGGATATTTTCTAGGTTaGAGATTTCTGAGAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: YFGHVSISELVFLVVVVVGYFLG*RFLRNS Trigger: GGAGTTTCTCAGAAATCTTCAACCTAGAAAATATCC...AACAACAACAACAACAAGAAAAACAAGCTCAGAAATGGACACATGACCAAAGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCACTATGTGAAGACAATTTGAAACTCCTCACTCTAATAGAGAAAAGCACTATTTTAGGAAGACACTaGTTTCTCTGCTCATTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLCEDNLKLLTLIEKSTILGRH*FLCSFG Trigger: TCCAAATGAGCAGAGAAATCAGTGTCTTCCTAAAAT...AGTGCTTTTCTCTATTAGAGTGAGGAGTTTCAAATTGTCTTCACATAGTGAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS-3UTR GCA 90 bp | CAATTTGAAACTCCTCACTCTAATAGAGAAAAGCACTTCCCATGTGGACTATTTTACAGCAAAAACCATTaGCAATATGTGCTGATAATG | + |
|
Preference number: 4 (lower is better) Translates to: QFETPHSNREKHFPCGLFYSKNH*QYVLIM Trigger: CATTATCAGCACATATTGGCAATGGTTTTTGCTGTA...AAATAGTCCACATGGGAAGTGCTTTTCTCTATTAGAGTGAGGAGTTTCAAATTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS-3UTR GCA 90 bp | TACTTTGGTCATGTGTCCATTTCTGAGCTTGTTTTTCTTGTTGTTGTTGTTGTTTACAGCAAAAACCATTaGCAATATGTGCTGATAATG | + |
|
Preference number: 4 (lower is better) Translates to: YFGHVSISELVFLVVVVVYSKNH*QYVLIM Trigger: CATTATCAGCACATATTGGCAATGGTTTTTGCTGTA...AACAACAACAACAACAAGAAAAACAAGCTCAGAAATGGACACATGACCAAAGTA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
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| CDS TCA 90 bp | AAGGGTGGACCCCTCGTTATACCAGAGGATGATTTGACCAAACTCTaGGTGCATGTCAACATCAGGGAAAGGGGGATATGTTCCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KGGPLVIPEDDLTKL*VHVNIRERGICSQP Trigger: TGGCTGGGAACATATCCCCCTTTCCCTGATGTTGACATGCACTCAGAGTTTGGTCAAATCATCCTCTGGTATAACGAGGGGTCCACCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS GCA 90 bp | GTGCATGTCAACATCAGGGAAAGGGGGATATGTTCCCAGCCAGACTaGACAGATGCACACTTGAATGATGGAACCACAGCAGACTATAGC | + |
|
Preference number: 5 (lower is better) Translates to: VHVNIRERGICSQPD*TDAHLNDGTTADYS Trigger: GCTATAGTCTGCTGTGGTTCCATCATTCAAGTGTGCATCTGTGCAGTCTGGCTGGGAACATATCCCCCTTTCCCTGATGTTGACATGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS GCA 90 bp | AGTGTGCACAGGAAACTGGTAAGGAGACTGGAGCTGGACTCTGCTTaGAAGACTCTGATCAAAAGGAGCATAGCTGATCTGTGGGACATT | + |
|
Preference number: 5 (lower is better) Translates to: SVHRKLVRRLELDSA*KTLIKRSIADLWDI Trigger: AATGTCCCACAGATCAGCTATGCTCCTTTTGATCAGAGTCTTGCAAGCAGAGTCCAGCTCCAGTCTCCTTACCAGTTTCCTGTGCACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS-3UTR CAA 90 bp | ACCTATAGGGTTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCCCTGGTTTGATGACTTaGAAGGCCACAACCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: TYRVAGPFSSLGNFSSSSPGLMT*KATTTM Trigger: CATTGTGGTTGTGGCCTTCAAAGTCATCAAACCAGG...GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAACCCTATAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR CAA 90 bp | ACCTATAGGGTTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCAAGGTGCTTCCTGGTTaGATGACTTTGAAGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: TYRVAGPFSSLGNFSSSSKVLPG*MTLKAT Trigger: TGTGGCCTTCAAAGTCATCAAACCAGGAAGCACCTT...GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAACCCTATAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS TCA 90 bp | GGAGCTGGACTCTGCTTGCAAGACTCTGATCAAAAGGAGCATAGCTaGTCTGTGGGACATTGTAGAGACTTAGAACTTGGGAGATCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GAGLCLQDSDQKEHS*SVGHCRDLELGRSE Trigger: CTCAGATCTCCCAAGTTCTAAGTCTCTACAATGTCCCACAGATCAGCTATGCTCCTTTTGATCAGAGTCTTGCAAGCAGAGTCCAGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS TCA 90 bp | GTCGTGTGCTCAGGCTGCCATTTGGCTCACATTGACTTAGTTCCCTaGCTTTGTGCAGATACAAATGTGGACACTCAAATACGATGGACC | + |
|
Preference number: 5 (lower is better) Translates to: VVCSGCHLAHIDLVP*LCADTNVDTQIRWT Trigger: GGTCCATCGTATTTGAGTGTCCACATTTGTATCTGCACAAAGTCAGGGAACTAAGTCAATGTGAGCCAAATGGCAGCCTGAGCACACGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
||
| CDS-3UTR CAA 90 bp | ACCTATAGGGTTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCGATTTCTCTGCTCATTaGGATACTGATCTTCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TYRVAGPFSSLGNFSSSSDFSAH*DTDLQD Trigger: GTCCTGAAGATCAGTATCCAAATGAGCAGAGAAATC...GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAACCCTATAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR CAA 90 bp | CACATTGTCTTGTTGGTGAGGCCCTTCAGAAGGGAGAAGCAGACCATAAAATTAACAATGTTCTCCTCATaGGAGAGTCTCACGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: HIVLLVRPFRREKQTIKLTMFSS*ESLTNW Trigger: CCAGTTCGTGAGACTCTCCAATGAGGAGAACATTGT...TAATTTTATGGTCTGCTTCTCCCTTCTGAAGGGCCTCACCAACAAGACAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS-3UTR CAA 90 bp | ACCTATAGGGTTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCATTGTTTTTGCCTCATaGAAGCTGTCAGGTAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: TYRVAGPFSSLGNFSSSSIVFAS*KLSGRL Trigger: AAGTCTACCTGACAGCTTCAATGAGGCAAAAACAAT...GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAACCCTATAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS-3UTR CAA 90 bp | ACCTATAGGGTTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCCTACAGCAAAAACCATaGCCAATATGTGCTGATAAT | + |
|
Preference number: 5 (lower is better) Translates to: TYRVAGPFSSLGNFSSSSLQQKP*PICADN Trigger: ATTATCAGCACATATTGGCAATGGTTTTTGCTGTAG...GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAACCCTATAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
||
| CDS-3UTR CAA 90 bp | ACCTATAGGGTTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCAGAATATTTGGGTCCTaGTTGATTGTTTCTACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TYRVAGPFSSLGNFSSSSRIFGS*LIVSTA Trigger: TGCTGTAGAAACAATCAACAAGGACCCAAATATTCT...GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAACCCTATAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
||
| CDS-3UTR CAA 90 bp | TTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCATTAGGGGCTTTTGTGATCAAGACATaGCCATTAAAAGGCAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LQVPLAPWVISLAPPLGAFVIKT*PLKGKN Trigger: GTTCTTGCCTTTTAATGGCAATGTCTTGATCACAAA...AGCCCCTAATGGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS-3UTR CAA 90 bp | ACCTATAGGGTTGCAGGTCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCTTTGTGATCAAGACATaGCCATTAAAAGGCAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TYRVAGPFSSLGNFSSSSFVIKT*PLKGKN Trigger: GTTCTTGCCTTTTAATGGCAATGTCTTGATCACAAA...GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGACCTGCAACCCTATAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
||
| CDS-3UTR CAA 90 bp | TGGGCCTCTCTTTGCAGTGATGGCCAACTAGGCCATCTTTTGATACATATGCAGCATGATCTGTTTCATTaGCAAATTCTCCATCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: WASLCSDGQLGHLLIHMQHDLFH*QILHLD Trigger: GTCCAGATGGAGAATTTGCAAATGAAACAGATCATG...CTGCATATGTATCAAAAGATGGCCTAGTTGGCCATCACTGCAAAGAGAGGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
||
| CDS TCA 90 bp | TTACGGAGAAACCGACTTAAAGAACTTCTTTCTCGAATAGCCACCTaGCCTCAGGAGGATCACATAGCATTTGGGAAGGAAGATAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRRNRLKELLSRIAT*PQEDHIAFGKEDKA Trigger: AGCTTTATCTTCCTTCCCAAATGCTATGTGATCCTCCTGAGGTCAGGTGGCTATTCGAGAAAGAAGTTCTTTAAGTCGGTTTCTCCGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS CCA 90 bp | GCTCTTCTCATGATCTGTTTCATTTGCAAATTCTCCATCTGGACATaGGGCACAATCGTAACAACAGAGTGGTCTCCAATCATCAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: ALLMICFICKFSIWT*GTIVTTEWSPIIRY Trigger: ATACCTGATGATTGGAGACCACTCTGTTGTTACGATTGTGCCCCATGTCCAGATGGAGAATTTGCAAATGAAACAGATCATGAGAAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
||
| CDS TCA 90 bp | GGTCTCCAATCATCAGGTATTTTGCTAAATCCAAGTGGACAGGTTTaGCTGCAAACATGTAAAGCAGACATATTGTGGTATTCACCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GLQSSGILLNPSGQV*LQTCKADILWYSPH Trigger: GTGGGGTGAATACCACAATATGTCTGCTTTACATGTTTGCAGTCAAACCTGTCCACTTGGATTTAGCAAAATACCTGATGATTGGAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
||
| CDS GCA 90 bp | CTGATCTTCAGGACACTTGATGCATTGATCCATATCTGTTTCATTTaGAAATTCTCCATCTGGACATGGGGCACAATCGTAACAACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LIFRTLDALIHICFI*KFSIWTWGTIVTTE Trigger: CTCTGTTGTTACGATTGTGCCCCATGTCCAGATGGAGAATTTGCAAATGAAACAGATATGGATCAATGCATCAAGTGTCCTGAAGATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS CCA 90 bp | GCATTGATCCATATCTGTTTCATTTGCAAATTCTCCATCTGGACATaGGGCACAATCGTAACAACAGAGTGGTCTCCAATCATCAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: ALIHICFICKFSIWT*GTIVTTEWSPIIRY Trigger: ATACCTGATGATTGGAGACCACTCTGTTGTTACGATTGTGCCCCATGTCCAGATGGAGAATTTGCAAATGAAACAGATATGGATCAATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS-3UTR CAA 90 bp | CTGGAGTTAAAAACTATGACCTACTTTGGTCATGTGTCCATTTCTGAGCTTGTTGTTGCTGAACCCTCCTaGTTCACAATGTTCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LELKTMTYFGHVSISELVVAEPS*FTMFSS Trigger: TGAGGAGAACATTGTGAACAAGGAGGGTTCAGCAAC...AACAAGCTCAGAAATGGACACATGACCAAAGTAGGTCATAGTTTTTAACTCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGCCCCAAACCCTCCTAAGACTGAAATTTACAAGCCACATTGTCTTGTTTGTAAAGCAGACATATaGTGGTATTCACCCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: RRAPNPPKTEIYKPHCLVCKADI*WYSPHL Trigger: AAGGTGGGGTGAATACCACAATATGTCTGCTTTACA...AACAAGACAATGTGGCTTGTAAATTTCAGTCTTAGGAGGGTTTGGGGCTCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
||
| CDS TCA 90 bp | GTTCCTCTCAATGTTGTAAGTTCCAACTTGAGTTTGCTCTTCTCATaGTCTGTTTCATTTGCAAATTCTCCATCTGGACATGGGGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: VPLNVVSSNLSLLFS*SVSFANSPSGHGAQ Trigger: TTGTGCCCCATGTCCAGATGGAGAATTTGCAAATGAAACAGATCATGAGAAGAGCAAACTCAAGTTGGAACTTACAACATTGAGAGGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
||
| CDS GCA 90 bp | TATCAAATTTACTGTGTTCCGACAAGGAAATATTGGACTCCGTACTaGAAATGCAATACAAAGTCCGTGCTTGGTCATGTCTTCTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: YQIYCVPTRKYWTPY*KCNTKSVLGHVFCE Trigger: CTCACAGAAGACATGACCAAGCACGGACTTTGTATTGCATTTGCAGTACGGAGTCCAATATTTCCTTGTCGGAACACAGTAAATTTGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS GCA 90 bp | TGTAAGTTCCAACTTGAGTTTGCTCTTCTCATGATCTGTTTCATTTaGAAATTCTCCATCTGGACATGGGGCACAATCGTAACAACAGAG | + |
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Preference number: 5 (lower is better) Translates to: CKFQLEFALLMICFI*KFSIWTWGTIVTTE Trigger: CTCTGTTGTTACGATTGTGCCCCATGTCCAGATGGAGAATTTGCAAATGAAACAGATCATGAGAAGAGCAAACTCAAGTTGGAACTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
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| CDS-3UTR CAA 90 bp | CACATTGTCTTGTTGGTGAGGCCCTTCAGAAGGGAGAAGCAGACCATAAAATTAAGAATATTTGGGTCCTaGTTGATTGTTTCTACAGCA | + |
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Preference number: 5 (lower is better) Translates to: HIVLLVRPFRREKQTIKLRIFGS*LIVSTA Trigger: TGCTGTAGAAACAATCAACAAGGACCCAAATATTCT...TAATTTTATGGTCTGCTTCTCCCTTCTGAAGGGCCTCACCAACAAGACAATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR CAA 90 bp | CTGGAGTTAAAAACTATGACCTACTTTGGTCATGTGTCCATTTCTGAGCTTGTTTTTCTGAGCTTGTTTTaGACCATGGTTGAGCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: LELKTMTYFGHVSISELVFLSLF*TMVEQW Trigger: CCACTGCTCAACCATGGTCAAAAACAAGCTCAGAAA...AACAAGCTCAGAAATGGACACATGACCAAAGTAGGTCATAGTTTTTAACTCCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
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| CDS-3UTR CAA 90 bp | GGTCATGTGTCCATTTCTGAGCTTGTTTTTCTTGTTGTTGTTGTTGTTTTTGTTACAATGTTCTCCTCATaGGAGAGTCTCACGAACTGG | + |
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Preference number: 5 (lower is better) Translates to: GHVSISELVFLVVVVVFVTMFSS*ESLTNW Trigger: CCAGTTCGTGAGACTCTCCAATGAGGAGAACATTGT...AACAAAAACAACAACAACAACAAGAAAAACAAGCTCAGAAATGGACACATGACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
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| CDS-3UTR CAA 90 bp | CTTTCACTATGTGAAGACAATTTGAAACTCCTCACTCTAATAGAGAAAAGCACTGTTGCTGAACCCTCCTaGTTCACAATGTTCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: LSLCEDNLKLLTLIEKSTVAEPS*FTMFSS Trigger: TGAGGAGAACATTGTGAACAAGGAGGGTTCAGCAAC...AGTGCTTTTCTCTATTAGAGTGAGGAGTTTCAAATTGTCTTCACATAGTGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR CAA 90 bp | CAATTTGAAACTCCTCACTCTAATAGAGAAAAGCACTTCCCATGTGGACTATTTCACTGGAGGCAAGAATaGAAACAATTTCCACAGCCA | + |
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Preference number: 5 (lower is better) Translates to: QFETPHSNREKHFPCGLFHWRQE*KQFPQP Trigger: TGGCTGTGGAAATTGTTTCAATTCTTGCCTCCAGTG...AAATAGTCCACATGGGAAGTGCTTTTCTCTATTAGAGTGAGGAGTTTCAAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS TCA 90 bp | GACACTGATTTCTCTGCTCATTTGGATACTGATCTTCAGGACACTTaGTGCATTGATCCATATCTGTTTCATTTGCAAATTCTCCATCTG | + |
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Preference number: 5 (lower is better) Translates to: DTDFSAHLDTDLQDT*CIDPYLFHLQILHL Trigger: CAGATGGAGAATTTGCAAATGAAACAGATATGGATCAATGCATCAAGTGTCCTGAAGATCAGTATCCAAATGAGCAGAGAAATCAGTGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR CAA 90 bp | GACAATTTGAAACTCCTCACTCTAATAGAGAAAAGCACTTCCCATGTGGACTATAGATCTGAGCTGTTATaGCTTTTGAATAGCCTCCTA | + |
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Preference number: 5 (lower is better) Translates to: DNLKLLTLIEKSTSHVDYRSELL*LLNSLL Trigger: TAGGAGGCTATTCAAAAGCAATAACAGCTCAGATCT...ATAGTCCACATGGGAAGTGCTTTTCTCTATTAGAGTGAGGAGTTTCAAATTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR CAA 90 bp | GGTCATGTGTCCATTTCTGAGCTTGTTTTTCTTGTTGTTGTTGTTGTTTTTGTTTGTAAAGCAGACATATaGTGGTATTCACCCCACCTT | + |
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Preference number: 5 (lower is better) Translates to: GHVSISELVFLVVVVVFVCKADI*WYSPHL Trigger: AAGGTGGGGTGAATACCACAATATGTCTGCTTTACA...AACAAAAACAACAACAACAACAAGAAAAACAAGCTCAGAAATGGACACATGACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
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| CDS-3UTR CAA 90 bp | CAATTTGAAACTCCTCACTCTAATAGAGAAAAGCACTTCCCATGTGGACTATTTCCATATCTGTTTCATTaGCAAATTCTCCATCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: QFETPHSNREKHFPCGLFPYLFH*QILHLD Trigger: GTCCAGATGGAGAATTTGCAAATGAAACAGATATGG...AAATAGTCCACATGGGAAGTGCTTTTCTCTATTAGAGTGAGGAGTTTCAAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR CAA 90 bp | GGTCATGTGTCCATTTCTGAGCTTGTTTTTCTTGTTGTTGTTGTTGTTTTTGTTCTGTGTTTTCTGAGCTaGTTTTTGACCATGGTTGAG | + |
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Preference number: 5 (lower is better) Translates to: GHVSISELVFLVVVVVFVLCFLS*FLTMVE Trigger: CTCAACCATGGTCAAAAACAAGCTCAGAAAACACAG...AACAAAAACAACAACAACAACAAGAAAAACAAGCTCAGAAATGGACACATGACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
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| CDS CCA 90 bp | CAAAAATGCTGTAATTTTAGGAAGACACTGATTTCTCTGCTCATTTaGATACTGATCTTCAGGACACTTGATGCATTGATCCATATCTGT | + |
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Preference number: 5 (lower is better) Translates to: QKCCNFRKTLISLLI*ILIFRTLDALIHIC Trigger: ACAGATATGGATCAATGCATCAAGTGTCCTGAAGATCAGTATCCAAATGAGCAGAGAAATCAGTGTCTTCCTAAAATTACAGCATTTTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS-3UTR CAA 90 bp | TACTTTGGTCATGTGTCCATTTCTGAGCTTGTTTTTCTTGTTGTTGTTGTTGTTCTACAGCAAAAACCATaGCCAATATGTGCTGATAAT | + |
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Preference number: 5 (lower is better) Translates to: YFGHVSISELVFLVVVVVLQQKP*PICADN Trigger: ATTATCAGCACATATTGGCAATGGTTTTTGCTGTAG...AACAACAACAACAACAAGAAAAACAAGCTCAGAAATGGACACATGACCAAAGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233936.2 |
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| CDS CCA 72 bp | AATGAATCTCCTTCCACTCTGACTGACAGCTCCACATaGAGTGCCTGGGCGATGGCATACACAGCAGCATGG | + |
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Preference number: 6 (lower is better) Translates to: NESPSTLTDSST*SAWAMAYTAAW Trigger: CCATGCTGCTGTGTATGCCATCGCCCAGGCACTCCATGTGGAGCTGTCAGTCAGAGTGGAAGGAGATTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS CCA 72 bp | GAGAGTCTCACGAACTGGCCATTTTGTAAGAATGGATaGAGCTTCCATGGGAGAGGAGCCCGGAGTACACCT | + |
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Preference number: 6 (lower is better) Translates to: ESLTNWPFCKNG*SFHGRGARSTP Trigger: AGGTGTACTCCGGGCTCCTCTCCCATGGAAGCTCCATCCATTCTTACAAAATGGCCAGTTCGTGAGACTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS TCA 72 bp | GGAGTACACCTTTATCAAATGAATCTCCTTCCACTCTaGCTGACAGCTCCACATGGAGTGCCTGGGCGATGG | + |
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Preference number: 6 (lower is better) Translates to: GVHLYQMNLLPL*LTAPHGVPGRW Trigger: CCATCGCCCAGGCACTCCATGTGGAGCTGTCAGTCAGAGTGGAAGGAGATTCATTTGATAAAGGTGTACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS GCA 72 bp | AGGAAACTGGTAAGGAGACTGGAGCTGGACTCTGCTTaGAAGACTCTGATCAAAAGGAGCATAGCTGATCTG | + |
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Preference number: 6 (lower is better) Translates to: RKLVRRLELDSA*KTLIKRSIADL Trigger: CAGATCAGCTATGCTCCTTTTGATCAGAGTCTTGCAAGCAGAGTCCAGCTCCAGTCTCCTTACCAGTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS CAA 90 bp | TGGGTCGCCATCCTCATTTGTAAGGTGCTTCCTGGTTTGATGACTTaGAAGGCCACAACCACAATGAAAGTCTTTGCCAAGACTGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: WVAILICKVLPGLMT*KATTTMKVFAKTAE Trigger: TTCTGCAGTCTTGGCAAAGACTTTCATTGTGGTTGTGGCCTTCAAAGTCATCAAACCAGGAAGCACCTTACAAATGAGGATGGCGACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS TCA 72 bp | AGAGGTCGTGTGCTCAGGCTGCCATTTGGCTCACATTaGCTTAGTTCCCTGACTTTGTGCAGATACAAATGT | + |
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Preference number: 6 (lower is better) Translates to: RGRVLRLPFGSH*LSSLTLCRYKC Trigger: ACATTTGTATCTGCACAAAGTCAGGGAACTAAGTCAATGTGAGCCAAATGGCAGCCTGAGCACACGACCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS TCA 72 bp | GGATATGTTCCCAGCCAGACTGCACAGATGCACACTTaGATGATGGAACCACAGCAGACTATAGCATTTGAG | + |
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Preference number: 6 (lower is better) Translates to: GYVPSQTAQMHT*MMEPQQTIAFE Trigger: CTCAAATGCTATAGTCTGCTGTGGTTCCATCATTCAAGTGTGCATCTGTGCAGTCTGGCTGGGAACATATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS TCA 72 bp | CCCCTCGTTATACCAGAGGATGATTTGACCAAACTCTaGGTGCATGTCAACATCAGGGAAAGGGGGATATGT | + |
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Preference number: 6 (lower is better) Translates to: PLVIPEDDLTKL*VHVNIRERGIC Trigger: ACATATCCCCCTTTCCCTGATGTTGACATGCACTCAGAGTTTGGTCAAATCATCCTCTGGTATAACGAGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS CCA 72 bp | GAGTTCTGTAATGTAGAGTTCTCCCCTCATATCATCTaGAACTACCAGGCCAACCCAGACCCAAGTGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: EFCNVEFSPHII*NYQANPDPSEV Trigger: TACTTCACTTGGGTCTGGGTTGGCCTGGTAGTTCCAGATGATATGAGGGGAGAACTCTACATTACAGAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS TCA 72 bp | CTCTGCTTGCAAGACTCTGATCAAAAGGAGCATAGCTaGTCTGTGGGACATTGTAGAGACTTAGAACTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LCLQDSDQKEHS*SVGHCRDLELG Trigger: CCCAAGTTCTAAGTCTCTACAATGTCCCACAGATCAGCTATGCTCCTTTTGATCAGAGTCTTGCAAGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS CCA 72 bp | TTCACAATGTTCTCCTCATTGGAGAGTCTCACGAACTaGCCATTTTGTAAGAATGGATGGAGCTTCCATGGG | + |
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Preference number: 6 (lower is better) Translates to: FTMFSSLESLTN*PFCKNGWSFHG Trigger: CCCATGGAAGCTCCATCCATTCTTACAAAATGGCCAGTTCGTGAGACTCTCCAATGAGGAGAACATTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS TCA 72 bp | AACCGACTTAAAGAACTTCTTTCTCGAATAGCCACCTaGCCTCAGGAGGATCACATAGCATTTGGGAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: NRLKELLSRIAT*PQEDHIAFGKE Trigger: TTCCTTCCCAAATGCTATGTGATCCTCCTGAGGTCAGGTGGCTATTCGAGAAAGAAGTTCTTTAAGTCGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS GCA 72 bp | GTTCCGACAAGGAAATATTGGACTCCGTACTGCAAATaGAATACAAAGTCCGTGCTTGGTCATGTCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: VPTRKYWTPYCK*NTKSVLGHVFC Trigger: ACAGAAGACATGACCAAGCACGGACTTTGTATTGCATTTGCAGTACGGAGTCCAATATTTCCTTGTCGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS CAA 72 bp | TGTAGAGACTTAGAACTTGGGAGATCTGAGCTGTTATaGCTTTTGAATAGCCTCCTATCACTGCAACCGGCT | + |
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Preference number: 6 (lower is better) Translates to: CRDLELGRSELL*LLNSLLSLQPA Trigger: AGCCGGTTGCAGTGATAGGAGGCTATTCAAAAGCAATAACAGCTCAGATCTCCCAAGTTCTAAGTCTCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS TCA 72 bp | TCAGGCTGCCATTTGGCTCACATTGACTTAGTTCCCTaGCTTTGTGCAGATACAAATGTGGACACTCAAATA | + |
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Preference number: 6 (lower is better) Translates to: SGCHLAHIDLVP*LCADTNVDTQI Trigger: TATTTGAGTGTCCACATTTGTATCTGCACAAAGTCAGGGAACTAAGTCAATGTGAGCCAAATGGCAGCCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS CAA 72 bp | ATCCTCATTTGTAAGGTGCTTCCTGGTTTGATGACTTaGAAGGCCACAACCACAATGAAAGTCTTTGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: ILICKVLPGLMT*KATTTMKVFAK Trigger: CTTGGCAAAGACTTTCATTGTGGTTGTGGCCTTCAAAGTCATCAAACCAGGAAGCACCTTACAAATGAGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS CCA 72 bp | TTGATCCATATCTGTTTCATTTGCAAATTCTCCATCTaGACATGGGGCACAATCGTAACAACAGAGTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LIHICFICKFSI*TWGTIVTTEWS Trigger: AGACCACTCTGTTGTTACGATTGTGCCCCATGTCCAGATGGAGAATTTGCAAATGAAACAGATATGGATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS CAA 90 bp | CTTCCTCTAAAATTATCAAATTTACTGTGTTCCGACAAGGAAATATaGGACTCCGTACTGCAAATGCAATACAAAGTCCGTGCTTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: LPLKLSNLLCSDKEI*DSVLQMQYKVRAWS Trigger: TGACCAAGCACGGACTTTGTATTGCATTTGCAGTACGGAGTCCAATATTTCCTTGTCGGAACACAGTAAATTTGATAATTTTAGAGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS CCA 72 bp | AATTATCAAATTTACTGTGTTCCGACAAGGAAATATTaGACTCCGTACTGCAAATGCAATACAAAGTCCGTG | + |
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Preference number: 6 (lower is better) Translates to: NYQIYCVPTRKY*TPYCKCNTKSV Trigger: CACGGACTTTGTATTGCATTTGCAGTACGGAGTCCAATATTTCCTTGTCGGAACACAGTAAATTTGATAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS CCA 72 bp | TGTAATTTTAGGAAGACACTGATTTCTCTGCTCATTTaGATACTGATCTTCAGGACACTTGATGCATTGATC | + |
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Preference number: 6 (lower is better) Translates to: CNFRKTLISLLI*ILIFRTLDALI Trigger: GATCAATGCATCAAGTGTCCTGAAGATCAGTATCCAAATGAGCAGAGAAATCAGTGTCTTCCTAAAATTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100968.4 |
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| CDS TCA 72 bp | CTGAGAAACTCCTTGAATCCCAGAATTTCATCCATGTaGTCTGAAAATAATAATACTCCACCAAAGTACTCA | + |
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Preference number: 6 (lower is better) Translates to: LRNSLNPRISSM*SENNNTPPKYS Trigger: TGAGTACTTTGGTGGAGTATTATTATTTTCAGATCACATGGATGAAATTCTGGGATTCAAGGAGTTTCTCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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| CDS CAA 72 bp | AAATTATCAAATTTACTGTGTTCCGACAAGGAAATATaGGACTCCGTACTGCAAATGCAATACAAAGTCCGT | + |
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Preference number: 6 (lower is better) Translates to: KLSNLLCSDKEI*DSVLQMQYKVR Trigger: ACGGACTTTGTATTGCATTTGCAGTACGGAGTCCAATATTTCCTTGTCGGAACACAGTAAATTTGATAATTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100968.4 ENSMUST00000233936.2 |
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