Pregenerated sensors for VMN2R25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094672Ensembl transcript IDs: ENSMUST00000162046.3, ENSMUST00000233160.2, ENSMUST00000233622.2
Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCCCTTCAGTCCCAGCGCTTGGGAGACAGAGGCAGGCAGATTTCTaGGTTCGAGTCCAGTCTGGTCTACAGACTGAGTTCCAGGACAAC | + |
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Preference number: 1 (lower is better) Translates to: TPSVPALGRQRQADF*VRVQSGLQTEFQDN Trigger: GTTGTCCTGGAACTCAGTCTGTAGACCAGACTGGACTCGAACTCAGAAATCTGCCTGCCTCTGTCTCCCAAGCGCTGGGACTGAAGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR TCA 90 bp | GAGGCAGGCAGATTTCTGAGTTCGAGTCCAGTCTGGTCTACAGACTaGGTTCCAGGACAACCAAGGCTACACAGAGAAACCCTGTCTCAA | + |
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Preference number: 1 (lower is better) Translates to: EAGRFLSSSPVWSTD*VPGQPRLHRETLSQ Trigger: TTGAGACAGGGTTTCTCTGTGTAGCCTTGGTTGTCCTGGAACTCAGTCTGTAGACCAGACTGGACTCGAACTCAGAAATCTGCCTGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR GCA 90 bp | ACCAGAGGTGCATCTGGGAGACCATCTCATTCACAAACCATTGGATaGAAAATCTGTCCTGACTGCAAGATGTTCTGGGGCAATGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: TRGASGRPSHSQTIG*KICPDCKMFWGNGG Trigger: GCCACCATTGCCCCAGAACATCTTGCAGTCAGGACAGATTTTGCATCCAATGGTTTGTGAATGAGATGGTCTCCCAGATGCACCTCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR GCA 90 bp | TTGCACACAGACTGGTGCCATTCTCTTAGTGCACATCCAGCCTTCTaGCAACTGCTTCTCTCATCTCTGTCACCATATTCTGCAGCCATC | + |
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Preference number: 1 (lower is better) Translates to: LHTDWCHSLSAHPAF*QLLLSSLSPYSAAI Trigger: GATGGCTGCAGAATATGGTGACAGAGATGAGAGAAGCAGTTGGCAGAAGGCTGGATGTGCACTAAGAGAATGGCACCAGTCTGTGTGCAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR TCA 90 bp | TGGGAGACCATCTCATTCACAAACCATTGGATGCAAAATCTGTCCTaGCTGCAAGATGTTCTGGGGCAATGGTGGCTCAGGATTTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: WETISFTNHWMQNLS*LQDVLGQWWLRICG Trigger: CCCACAAATCCTGAGCCACCATTGCCCCAGAACATCTTGCAGTCAGGACAGATTTTGCATCCAATGGTTTGTGAATGAGATGGTCTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR TCA 90 bp | GCTCTCTCTGGGCAGAATTTGGATATGGAGAGGTATGGCAAAGGGTaGACTCCCAGGCAAATGTGGAAACCAGAAGAATCCTATTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: ALSGQNLDMERYGKG*TPRQMWKPEESYSW Trigger: CCAGGAATAGGATTCTTCTGGTTTCCACATTTGCCTGGGAGTTCACCCTTTGCCATACCTCTCCATATCCAAATTCTGCCCAGAGAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR GCA 90 bp | CAGACTGGTGCCATTCTCTTAGTGCACATCCAGCCTTCTGCCAACTaGTTCTCTCATCTCTGTCACCATATTCTGCAGCCATCTTTGACA | + |
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Preference number: 1 (lower is better) Translates to: QTGAILLVHIQPSAN*FSHLCHHILQPSLT Trigger: TGTCAAAGATGGCTGCAGAATATGGTGACAGAGATGAGAGAAGCAGTTGGCAGAAGGCTGGATGTGCACTAAGAGAATGGCACCAGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR CCA 90 bp | TGCAACAGCTGCTCTCTCTGGGCAGAATTTGGATATGGAGAGGTATaGCAAAGGGTGAACTCCCAGGCAAATGTGGAAACCAGAAGAATC | + |
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Preference number: 1 (lower is better) Translates to: CNSCSLWAEFGYGEV*QRVNSQANVETRRI Trigger: GATTCTTCTGGTTTCCACATTTGCCTGGGAGTTCACCCTTTGCCATACCTCTCCATATCCAAATTCTGCCCAGAGAGAGCAGCTGTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR TCA 90 bp | CCAACTGCTTCTCTCATCTCTGTCACCATATTCTGCAGCCATCTTTaGCAAAGGCCCAATGCTGAAACAGAGACTATGATAGCTATCAGA | + |
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Preference number: 1 (lower is better) Translates to: PTASLISVTIFCSHL*QRPNAETETMIAIR Trigger: TCTGATAGCTATCATAGTCTCTGTTTCAGCATTGGGCCTTTGTCAAAGATGGCTGCAGAATATGGTGACAGAGATGAGAGAAGCAGTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR TCA 90 bp | ACCACTCTGCAGAGACTGGTAATTAAAGATGTCAAGCTTGATTGCTaGAACTTCCTTGTTCACACTGTACTCCTCATTGGTGCTTCTCCC | + |
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Preference number: 1 (lower is better) Translates to: TTLQRLVIKDVKLDC*NFLVHTVLLIGASP Trigger: GGGAGAAGCACCAATGAGGAGTACAGTGTGAACAAGGAAGTTTCAGCAATCAAGCTTGACATCTTTAATTACCAGTCTCTGCAGAGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR GCA 90 bp | CACAACAAGAGCAACAAGTCAAAGAACAGATTGCTAAGGATATTCTaGTATAGTCATGGAGCAGTGCCTAGTCCAGGTTTCATCACAGAG | + |
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Preference number: 1 (lower is better) Translates to: HNKSNKSKNRLLRIF*YSHGAVPSPGFITE Trigger: CTCTGTGATGAAACCTGGACTAGGCACTGCTCCATGACTATAGCAGAATATCCTTAGCAATCTGTTCTTTGACTTGTTGCTCTTGTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR TCA 90 bp | GAGAAGATATCTGAAAGCCCACATGGTTTAGGATACATGATTCTATaGTTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: EKISESPHGLGYMIL*FSMVCCILGPIPLL Trigger: GAGAAGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATCATAGAATCATGTATCCTAAACCATGTGGGCTTTCAGATATCTTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR TCA 90 bp | AGCACTTTCTATGAAGGATGTTTGCTCTCTCAAGAGACTATCCACTaGTGTGTTGGATATCCTCAGGATAAACATGTCTGTGTTTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: STFYEGCLLSQETIH*CVGYPQDKHVCVSS Trigger: AGAGGAAACACAGACATGTTTATCCTGAGGATATCCAACACATCAGTGGATAGTCTCTTGAGAGAGCAAACATCCTTCATAGAAAGTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR CCA 90 bp | TTTAGGATACATGATTCTATGATTCTCTATGGTCTGTTGCATCCTTaGCCCTATACCTCTTCTCCATGCCCACATTTACCATCATTCACA | + |
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Preference number: 1 (lower is better) Translates to: FRIHDSMILYGLLHP*PYTSSPCPHLPSFT Trigger: TGTGAATGATGGTAAATGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATCATAGAATCATGTATCCTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR TCA 90 bp | CTTGGTTCACTGTGTCTAGTTGGCTCTAAGGATAACAGGGAAAAGTaGTTAAGTTGCAGATGCCACTGTTTGGAAAAATGTATTGACTAC | + |
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Preference number: 1 (lower is better) Translates to: LGSLCLVGSKDNREK*LSCRCHCLEKCIDY Trigger: GTAGTCAATACATTTTTCCAAACAGTGGCATCTGCAACTTAATCACTTTTCCCTGTTATCCTTAGAGCCAACTAGACACAGTGAACCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR TCA 90 bp | AACAAACAAAACTACTTTGGCTTTGTAGCCATTTCTGCAGGTTTTTaGCCATGGTTAAACAGTGATTCCTCCCAATGTTGCAAGCTCCAA | + |
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Preference number: 1 (lower is better) Translates to: NKQNYFGFVAISAGF*PWLNSDSSQCCKLQ Trigger: TTGGAGCTTGCAACATTGGGAGGAATCACTGTTTAACCATGGTCAAAAACCTGCAGAAATGGCTACAAAGCCAAAGTAGTTTTGTTTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR TCA 90 bp | AAATGGGATACAGGACTAAACAAAGAATTCTCACAGGAGGAATTCTaGATGGACAAGAAGCACCCAAAGAAATGTTCAACACCCTTAATC | + |
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Preference number: 1 (lower is better) Translates to: KWDTGLNKEFSQEEF*MDKKHPKKCSTPLI Trigger: GATTAAGGGTGTTGAACATTTCTTTGGGTGCTTCTTGTCCATTCAGAATTCCTCCTGTGAGAATTCTTTGTTTAGTCCTGTATCCCATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR GCA 90 bp | TCCTGGTTTGATGGCTTTGAAAGCCACAACCACAATGAAGGTCTTTaGCAAGATAGCAGAAATGACAATGGAAAATACAATCCCAAAAAT | + |
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Preference number: 1 (lower is better) Translates to: SWFDGFESHNHNEGL*QDSRNDNGKYNPKN Trigger: ATTTTTGGGATTGTATTTTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATTGTGGTTGTGGCTTTCAAAGCCATCAAACCAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR TCA 90 bp | TCTTGGTGTGACTCACCACAAGCAACTGAAAAAGGAGTATCTGTATaGGAAGAGCTTGTAATCTCTGAAGAAAGAAATCATAGAAGACTT | + |
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Preference number: 1 (lower is better) Translates to: SWCDSPQATEKGVSV*EELVISEERNHRRL Trigger: AAGTCTTCTATGATTTCTTTCTTCAGAGATTACAAGCTCTTCTCATACAGATACTCCTTTTTCAGTTGCTTGTGGTGAGTCACACCAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR GCA 90 bp | CTGATCTTCCGGACACTTAATACATTGATGCATATCTGTTTTATTTaGAATTTCTCCATCTGGACATGGGACACAATCAAAACAACAGAA | + |
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Preference number: 1 (lower is better) Translates to: LIFRTLNTLMHICFI*NFSIWTWDTIKTTE Trigger: TTCTGTTGTTTTGATTGTGTCCCATGTCCAGATGGAGAAATTGCAAATAAAACAGATATGCATCAATGTATTAAGTGTCCGGAAGATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR CCA 90 bp | ATCCCAAAAATAATTTGTCTCAAGACACAAGTGACTGTTCTAGGTTaGCCAATGAATATTAGTGAGCAAAAGAAACAGAGCTTTAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: IPKIICLKTQVTVLG*PMNISEQKKQSFRE Trigger: TTCTCTAAAGCTCTGTTTCTTTTGCTCACTAATATTCATTGGCCAACCTAGAACAGTCACTTGTGTCTTGAGACAAATTATTTTTGGGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR CAA 90 bp | AAATATCCACTGAGCAGTGGTGGGGCACCCCTTCAGTCCCAGCGCTaGGGAGACAGAGGCAGGCAGATTTCTGAGTTCGAGTCCAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: KYPLSSGGAPLQSQR*GDRGRQISEFESSL Trigger: CAGACTGGACTCGAACTCAGAAATCTGCCTGCCTCTGTCTCCCAAGCGCTGGGACTGAAGGGGTGCCCCACCACTGCTCAGTGGATATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR-3UTR TCA 90 bp | GCATGTCAACATCAGGGAAAGGAGGATATGTTCCCAGCCAGACTGCACAGATGCTCGCCAACCTTCACATaGGCTTCAGTACCACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: ACQHQGKEDMFPARLHRCSPTFT*ASVPLC Trigger: GCAGAGTGGTACTGAAGCTCATGTGAAGGTTGGCGA...GCATCTGTGCAGTCTGGCTGGGAACATATCCTCCTTTCCCTGATGTTGACATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR-3UTR TCA 90 bp | GCATGTCAACATCAGGGAAAGGAGGATATGTTCCCAGCCAGACTGCACAGATGCATGAGAGGCAACCCATaGAAGACATTGCCTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: ACQHQGKEDMFPARLHRCMRGNP*KTLPGW Trigger: CCATCCAGGCAATGTCTTTCATGGGTTGCCTCTCAT...GCATCTGTGCAGTCTGGCTGGGAACATATCCTCCTTTCCCTGATGTTGACATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAACATCAGGGAAAGGAGGATATGTTCCCAGCCAGACTGCACAGATGCACACGGTCTGTTGCATCCTTaGCCCTATACCTCTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: VNIRERRICSQPDCTDAHGLLHP*PYTSSP Trigger: TGGAGAAGAGGTATAGGGCCAAGGATGCAACAGACC...GTGTGCATCTGTGCAGTCTGGCTGGGAACATATCCTCCTTTCCCTGATGTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGGCCAAACATTCTGGCAGAACTTCAGGTATGCTAGTTGCACACAGACTGGTCTAGGAACCAGAAGCTaGGTGGCTCCGAGACCTAAG | + |
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Preference number: 2 (lower is better) Translates to: QGQTFWQNFRYASCTQTGLGTRS*VAPRPK Trigger: CTTAGGTCTCGGAGCCACCCAGCTTCTGGTTCCTAG...ACCAGTCTGTGTGCAACTAGCATACCTGAAGTTCTGCCAGAATGTTTGGCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAACATCAGGGAAAGGAGGATATGTTCCCAGCCAGACTGCACAGATGCACACAAGACATTGCCTGGATaGCTAGGAACCAGAAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: VNIRERRICSQPDCTDAHKTLPG*LGTRSW Trigger: CCAGCTTCTGGTTCCTAGCCATCCAGGCAATGTCTT...GTGTGCATCTGTGCAGTCTGGCTGGGAACATATCCTCCTTTCCCTGATGTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR-3UTR TCA 90 bp | GCATGTCAACATCAGGGAAAGGAGGATATGTTCCCAGCCAGACTGCACAGATGCATGCAAAATCTGTCCTaGCTGCAAGATGTTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: ACQHQGKEDMFPARLHRCMQNLS*LQDVLG Trigger: CCCCAGAACATCTTGCAGTCAGGACAGATTTTGCAT...GCATCTGTGCAGTCTGGCTGGGAACATATCCTCCTTTCCCTGATGTTGACATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR-3UTR TCA 90 bp | GCATCCTTGGCCCTATACCTCTTCTCCATGCCCACATTTACCATCATTCACATTTCGCCAACCTTCACATaGGCTTCAGTACCACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: ASLALYLFSMPTFTIIHISPTFT*ASVPLC Trigger: GCAGAGTGGTACTGAAGCTCATGTGAAGGTTGGCGA...AATGTGAATGATGGTAAATGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR CAA 90 bp | TGGGAAGAAATATACATCCCAGTAAGCCAGCACTGGAGGCTAGAATaGAAAGAATTTCCACGGCCACCATGGTTTTGCCCTTCGAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: WEEIYIPVSQHWRLE*KEFPRPPWFCPSSS Trigger: TGAGCTCGAAGGGCAAAACCATGGTGGCCGTGGAAATTCTTTCAATTCTAGCCTCCAGTGCTGGCTTACTGGGATGTATATTTCTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR CAA 90 bp | GTTGTACCAGAGGTGCATCTGGGAGACCATCTCATTCACAAACCATaGGATGCAAAATCTGTCCTGACTGCAAGATGTTCTGGGGCAATG | + |
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Preference number: 2 (lower is better) Translates to: VVPEVHLGDHLIHKP*DAKSVLTARCSGAM Trigger: CATTGCCCCAGAACATCTTGCAGTCAGGACAGATTTTGCATCCAATGGTTTGTGAATGAGATGGTCTCCCAGATGCACCTCTGGTACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGGCACAGATGCACACTTaGATGATGGAACCACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: VSSVSLHMLSSMFSLSIEAQMHT*MMEPQQ Trigger: CTGCTGTGGTTCCATCATTCAAGTGTGCATCTGTGC...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGGACTTGCCCAAACTCTaGCTGCATGTCAACATCAGG | + |
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Preference number: 2 (lower is better) Translates to: VSSVSLHMLSSMFSLSIEDLPKL*LHVNIR Trigger: CCTGATGTTGACATGCAGTCAGAGTTTGGGCAAGTC...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR-3UTR TCA 90 bp | AGAACACCAGTCCTCAACCCATGGACTGCCCCCACTCTCTCAGAACTTAGTAATCAGGATTTGTGGGAGTaGCCAAAGAATGACTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: RTPVLNPWTAPTLSELSNQDLWE*PKNDLS Trigger: AGACAAGTCATTCTTTGGTCACTCCCACAAATCCTG...ATTACTAAGTTCTGAGAGAGTGGGGGCAGTCCATGGGTTGAGGACTGGTGTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGCAGCCTTCTGCCAACTaGTTCTCTCATCTCTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: VSSVSLHMLSSMFSLSIEQPSAN*FSHLCH Trigger: GTGACAGAGATGAGAGAAGCAGTTGGCAGAAGGCTG...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGGGTCTGTTGCATCCTTaGCCCTATACCTCTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: VSSVSLHMLSSMFSLSIEGLLHP*PYTSSP Trigger: TGGAGAAGAGGTATAGGGCCAAGGATGCAACAGACC...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR-3UTR TCA 90 bp | AGAACACCAGTCCTCAACCCATGGACTGCCCCCACTCTCTCAGAACTTAGTAATGATAACAGGGAAAAGTaGTTAAGTTGCAGATGCCAC | + |
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Preference number: 2 (lower is better) Translates to: RTPVLNPWTAPTLSELSNDNREK*LSCRCH Trigger: GTGGCATCTGCAACTTAATCACTTTTCCCTGTTATC...ATTACTAAGTTCTGAGAGAGTGGGGGCAGTCCATGGGTTGAGGACTGGTGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR-3UTR TCA 90 bp | GCATGTCAACATCAGGGAAAGGAGGATATGTTCCCAGCCAGACTGCACAGATGCGGATACATGATTCTATaGTTCTCTATGGTCTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: ACQHQGKEDMFPARLHRCGYMIL*FSMVCC Trigger: GCAACAGACCATAGAGAATCATAGAATCATGTATCC...GCATCTGTGCAGTCTGGCTGGGAACATATCCTCCTTTCCCTGATGTTGACATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR-3UTR GCA 90 bp | GTCAACATCAGGGAAAGGAGGATATGTTCCCAGCCAGACTGCACAGATGCACACGTGGACAACTTTGACTaGAAACAGATAAAGGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: VNIRERRICSQPDCTDAHVDNFD*KQIKES Trigger: AGACTCCTTTATCTGTTTGCAGTCAAAGTTGTCCAC...GTGTGCATCTGTGCAGTCTGGCTGGGAACATATCCTCCTTTCCCTGATGTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCATGCCCACATTTACCATCATTCACATTCCCTCATTGAGAATAGATTTCCCAGTCCTCAACCCATaGACTGCCCCCACTCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: FSMPTFTIIHIPSLRIDFPVLNP*TAPTLS Trigger: TGAGAGAGTGGGGGCAGTCCATGGGTTGAGGACTGG...GAAATCTATTCTCAATGAGGGAATGTGAATGATGGTAAATGTGGGCATGGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGCCAAGGAGACAAGAACAGTTCCCAGTGGATCTTCATGGGCCAAAAATACCGATAACAGGGAAAAGTaGTTAAGTTGCAGATGCCAC | + |
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Preference number: 2 (lower is better) Translates to: MAKETRTVPSGSSWAKNTDNREK*LSCRCH Trigger: GTGGCATCTGCAACTTAATCACTTTTCCCTGTTATC...GGTATTTTTGGCCCATGAAGATCCACTGGGAACTGTTCTTGTCTCCTTGGCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGCCAAGGAGACAAGAACAGTTCCCAGTGGATCTTCATGGGCCAAAAATACCCCAAGTGGACAACTTTaGCTGCAAACAGATAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: MAKETRTVPSGSSWAKNTPSGQL*LQTDKG Trigger: TCCTTTATCTGTTTGCAGTCAAAGTTGTCCACTTGG...GGTATTTTTGGCCCATGAAGATCCACTGGGAACTGTTCTTGTCTCCTTGGCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR-3UTR TCA 90 bp | GATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTTCTCCATGCCCACATTCTGTTATTTGCTCTaGCAATGGGTGTTTCTCGAT | + |
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Preference number: 2 (lower is better) Translates to: DSLWSVASLALYLFSMPTFCYLL*QWVFLD Trigger: ATCGAGAAACACCCATTGTCAGAGCAAATAACAGAA...TGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGCAGAATTTGGATATGGAGAGGTATGGCAAAGGGTGAACTCCCAGGCAAAATCAAAACAACAGAATaGTTTCCCCTCAACAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LGRIWIWRGMAKGELPGKIKTTE*FPLNSC Trigger: ACAGCTGTTGAGGGGAAACCATTCTGTTGTTTTGAT...TTTGCCTGGGAGTTCACCCTTTGCCATACCTCTCCATATCCAAATTCTGCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| 3UTR-3UTR CCA 90 bp | GATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTTCTCCATGCCCACAATCAAAACAACAGAATaGTTTCCCCTCAACAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: DSLWSVASLALYLFSMPTIKTTE*FPLNSC Trigger: ACAGCTGTTGAGGGGAAACCATTCTGTTGTTTTGAT...TGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGTCTGTGTTTCCTCTGTaGGTCTTCATATGCTCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: VSSVSLHMLSSMFSLSIESVFPL*VFICSH Trigger: ATGAGAGCATATGAAGACTCACAGAGGAAACACAGA...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGGGCAGAATTTGGATATGGAGAGGTATGGCAAAGGGTGAACTCCCAGGCAAAATTTCTGCAGGTTTTTaGCCATGGTTAAACAGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: LGRIWIWRGMAKGELPGKISAGF*PWLNSD Trigger: ATCACTGTTTAACCATGGTCAAAAACCTGCAGAAAT...TTTGCCTGGGAGTTCACCCTTTGCCATACCTCTCCATATCCAAATTCTGCCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR GCA 90 bp | GCATCCTTGGCCCTATACCTCTTCTCCATGCCCACATTTACCATCATTCACATTGATTCCTCCCAATGTTaGAAGCTCCAACTTGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: ASLALYLFSMPTFTIIHIDSSQC*KLQLEF Trigger: AAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATC...AATGTGAATGATGGTAAATGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAATCCACACACTGCAGAAACCCAGCATGCTGAATGTGATTGTTTTTGCCTCAATAGTCATGGAGCAGTaGCTAGTCCAGGTTTCATCA | + |
|
Preference number: 2 (lower is better) Translates to: EIHTLQKPSMLNVIVFASIVMEQ*LVQVSS Trigger: TGATGAAACCTGGACTAGGCACTGCTCCATGACTAT...TGAGGCAAAAACAATCACATTCAGCATGCTGGGTTTCTGCAGTGTGTGGATTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CCA 90 bp | GATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTTCTCCATGCCCACAGCAGATGCCACTGTTTaGAAAAATGTATTGACTACA | + |
|
Preference number: 2 (lower is better) Translates to: DSLWSVASLALYLFSMPTADATV*KNVLTT Trigger: TGTAGTCAATACATTTTTCCAAACAGTGGCATCTGC...TGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGCAGAATTTGGATATGGAGAGGTATGGCAAAGGGTGAACTCCCAGGCAAATGTTCCTGCACTGCATaGAAATTAATTTCATGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: LGRIWIWRGMAKGELPGKCSCTA*KLISWD Trigger: ATCCCATGAAATTAATTTCCATGCAGTGCAGGAACA...TTTGCCTGGGAGTTCACCCTTTGCCATACCTCTCCATATCCAAATTCTGCCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGCAGAATTTGGATATGGAGAGGTATGGCAAAGGGTGAACTCCCAGGCAAATCACAAAAGAACACATaGTATGTGCTCACTTGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: LGRIWIWRGMAKGELPGKSQKNT*YVLTCK Trigger: CTTACAAGTGAGCACATACCATGTGTTCTTTTGTGA...TTTGCCTGGGAGTTCACCCTTTGCCATACCTCTCCATATCCAAATTCTGCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR TCA 90 bp | GCATCCTTGGCCCTATACCTCTTCTCCATGCCCACATTTACCATCATTCACATTATAAGAGAAGATATCTaGAAGCCCACATGGTTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: ASLALYLFSMPTFTIIHIIREDI*KPTWFR Trigger: CCTAAACCATGTGGGCTTTCAGATATCTTCTCTTAT...AATGTGAATGATGGTAAATGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR TCA 90 bp | ATACATGATTCTATGATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTTTGCAAGCTCCAACTTaGGTTTGCCCTTGGCATGAT | + |
|
Preference number: 2 (lower is better) Translates to: IHDSMILYGLLHPWPYTSLQAPT*VCPWHD Trigger: ATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAA...AGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATCATAGAATCATGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCTATGAAGGATGTTTGCTCTCTCAAGAGACTATCCACTGATGTGTTGGATACAGATAAAGGAGTCTaGTTGTGGTGCTCACCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LSMKDVCSLKRLSTDVLDTDKGV*LWCSPQ Trigger: TTGGGGTGAGCACCACAATCAGACTCCTTTATCTGT...ATCCAACACATCAGTGGATAGTCTCTTGAGAGAGCAAACATCCTTCATAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGCTTTGTAGCCATTTCTaGAGGTTTTTGACCATGGTT | + |
|
Preference number: 2 (lower is better) Translates to: VSSVSLHMLSSMFSLSIELCSHF*RFLTMV Trigger: AACCATGGTCAAAAACCTGCAGAAATGGCTACAAAG...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGTTGCTAAGGATATTCTaGTATAGTCATGGAGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: VSSVSLHMLSSMFSLSIELLRIF*YSHGAV Trigger: CACTGCTCCATGACTATAGCAGAATATCCTTAGCAA...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAATCCACACACTGCAGAAACCCAGCATGCTGAATGTGATTGTTTTTGCCTCATCACAAACCATTGGATaGAAAATCTGTCCTGACTGC | + |
|
Preference number: 2 (lower is better) Translates to: EIHTLQKPSMLNVIVFASSQTIG*KICPDC Trigger: GCAGTCAGGACAGATTTTGCATCCAATGGTTTGTGA...TGAGGCAAAAACAATCACATTCAGCATGCTGGGTTTCTGCAGTGTGTGGATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGCCAAACATTCTGGCAGAACTTCAGGTATGCTAGTTGCACACAGACTGGTATTCCTCTGTTTATTTaGATACTGATCTTCCGGACA | + |
|
Preference number: 2 (lower is better) Translates to: QGQTFWQNFRYASCTQTGIPLFI*ILIFRT Trigger: TGTCCGGAAGATCAGTATCCAAATAAACAGAGGAAT...ACCAGTCTGTGTGCAACTAGCATACCTGAAGTTCTGCCAGAATGTTTGGCCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR TCA 90 bp | AAACATGTCTGTGTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCGATAACAGGGAAAAGTaGTTAAGTTGCAGATGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: KHVCVSSVSLHMLSSMFSDNREK*LSCRCH Trigger: GTGGCATCTGCAACTTAATCACTTTTCCCTGTTATC...GGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAACACAGACATGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCACCATCCCCATTTTTAAGATGCTTCCTGGTTTGATGGCTTTGAAAGCCACAATAAGAGAAGATATCTaGAAGCCCACATGGTTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: VTIPIFKMLPGLMALKATIREDI*KPTWFR Trigger: CCTAAACCATGTGGGCTTTCAGATATCTTCTCTTAT...TGTGGCTTTCAAAGCCATCAAACCAGGAAGCATCTTAAAAATGGGGATGGTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCAAAACTACTCTGAGATTCGACCTTACACCAGTCAGAATGGTTACAATCAAACGTTACACCAGAGGATaGCTTGCCCAAACTCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: IKTTLRFDLTPVRMVTIKRYTRG*LAQTLT Trigger: AGTCAGAGTTTGGGCAAGTCATCCTCTGGTGTAACG...TTTGATTGTAACCATTCTGACTGGTGTAAGGTCGAATCTCAGAGTAGTTTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR TCA 90 bp | ATACATGATTCTATGATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTTCAGGTAAGTGGGTATaGAAGAAATCCACACACTGC | + |
|
Preference number: 2 (lower is better) Translates to: IHDSMILYGLLHPWPYTSSGKWV*KKSTHC Trigger: GCAGTGTGTGGATTTCTTTCATACCCACTTACCTGA...AGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATCATAGAATCATGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CCA 90 bp | GCATCCTTGGCCCTATACCTCTTCTCCATGCCCACATTTACCATCATTCACATTTTATCTAATCTGTGTTaGCTTGGTTCACTGTGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: ASLALYLFSMPTFTIIHILSNLC*LGSLCL Trigger: TAGACACAGTGAACCAAGCCAACACAGATTAGATAA...AATGTGAATGATGGTAAATGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CCA 90 bp | AAACATGTCTGTGTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCAAGAACAGTTCCCAGTaGATCTTCATGGGCCAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: KHVCVSSVSLHMLSSMFSKNSSQ*IFMGQK Trigger: TTTTTGGCCCATGAAGATCCACTGGGAACTGTTCTT...GGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAACACAGACATGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTTCTATGAAGGATGTTTGCTCTCTCAAGAGACTATCCACTGATGTGTTGGATATGAAAGACATTGCCTaGATGGCTAGGAACCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LSMKDVCSLKRLSTDVLDMKDIA*MARNQK Trigger: CTTCTGGTTCCTAGCCATCCAGGCAATGTCTTTCAT...ATCCAACACATCAGTGGATAGTCTCTTGAGAGAGCAAACATCCTTCATAGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAAAATACAATCCCAAAGCTAGGGAAGTAAGATaGGAGTGCATGGGGGAACAC | + |
|
Preference number: 2 (lower is better) Translates to: NEGLCQDSRNDNGKYNPKAREVR*ECMGEH Trigger: GTGTTCCCCCATGCACTCCCATCTTACTTCCCTAGC...TTTGGGATTGTATTTTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCAAAACTACTCTGAGATTCGACCTTACACCAGTCAGAATGGTTACAATCAAATTGCAAGCTCCAACTTaGGTTTGCCCTTGGCATGAT | + |
|
Preference number: 2 (lower is better) Translates to: IKTTLRFDLTPVRMVTIKLQAPT*VCPWHD Trigger: ATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAA...TTTGATTGTAACCATTCTGACTGGTGTAAGGTCGAATCTCAGAGTAGTTTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCTATGAAGGATGTTTGCTCTCTCAAGAGACTATCCACTGATGTGTTGGATGTCAAGCTTGATTGCTaGAACTTCCTTGTTCACACT | + |
|
Preference number: 2 (lower is better) Translates to: LSMKDVCSLKRLSTDVLDVKLDC*NFLVHT Trigger: AGTGTGAACAAGGAAGTTTCAGCAATCAAGCTTGAC...ATCCAACACATCAGTGGATAGTCTCTTGAGAGAGCAAACATCCTTCATAGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCAAAACTACTCTGAGATTCGACCTTACACCAGTCAGAATGGTTACAATCAAAACAGATAAAGGAGTCTaGTTGTGGTGCTCACCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: IKTTLRFDLTPVRMVTIKTDKGV*LWCSPQ Trigger: TTGGGGTGAGCACCACAATCAGACTCCTTTATCTGT...TTTGATTGTAACCATTCTGACTGGTGTAAGGTCGAATCTCAGAGTAGTTTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCTATGAAGGATGTTTGCTCTCTCAAGAGACTATCCACTGATGTGTTGGATCCAAGTGGACAACTTTaGCTGCAAACAGATAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LSMKDVCSLKRLSTDVLDPSGQL*LQTDKG Trigger: TCCTTTATCTGTTTGCAGTCAAAGTTGTCCACTTGG...ATCCAACACATCAGTGGATAGTCTCTTGAGAGAGCAAACATCCTTCATAGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR GCA 90 bp | AAACATGTCTGTGTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCGTGGACAACTTTGACTaGAAACAGATAAAGGAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: KHVCVSSVSLHMLSSMFSVDNFD*KQIKES Trigger: AGACTCCTTTATCTGTTTGCAGTCAAAGTTGTCCAC...GGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAACACAGACATGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR GCA 90 bp | AATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAAAATACAATCCCAAAGCACATCCAGCCTTCTaGCAACTGCTTCTCTCATCT | + |
|
Preference number: 2 (lower is better) Translates to: NEGLCQDSRNDNGKYNPKAHPAF*QLLLSS Trigger: AGATGAGAGAAGCAGTTGGCAGAAGGCTGGATGTGC...TTTGGGATTGTATTTTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCAATATAACTAGACTCTGCCCAAAGAGATTGAATTTGGCCTTAGGTTATAAAGGTCTGTTGCATCCTTaGCCCTATACCTCTTCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LNITRLCPKRLNLALGYKGLLHP*PYTSSP Trigger: TGGAGAAGAGGTATAGGGCCAAGGATGCAACAGACC...TTTATAACCTAAGGCCAAATTCAATCTCTTTGGGCAGAGTCTAGTTATATTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CCA 90 bp | TCATTGAGAATAGATTTCAATGGGTGTAAATCATGTCAGCTTTCACTCTGGGAAAACCACAGCAGACTATaGCATTTGAGAGTCGGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SLRIDFNGCKSCQLSLWENHSRL*HLRVGS Trigger: TGACCCGACTCTCAAATGCCATAGTCTGCTGTGGTT...TTCCCAGAGTGAAAGCTGACATGATTTACACCCATTGAAATCTATTCTCAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCAAAACTACTCTGAGATTCGACCTTACACCAGTCAGAATGGTTACAATCAAAGGGTATAGCCCAGACTaGCTTCAAACTCATGATCCT | + |
|
Preference number: 2 (lower is better) Translates to: IKTTLRFDLTPVRMVTIKGYSPD*LQTHDP Trigger: AGGATCATGAGTTTGAAGCCAGTCTGGGCTATACCC...TTTGATTGTAACCATTCTGACTGGTGTAAGGTCGAATCTCAGAGTAGTTTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR TCA 90 bp | ATACATGATTCTATGATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTGGATACATGATTCTATaGTTCTCTATGGTCTGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: IHDSMILYGLLHPWPYTSGYMIL*FSMVCC Trigger: GCAACAGACCATAGAGAATCATAGAATCATGTATCC...AGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATCATAGAATCATGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCTCCATGCCCACATTTACCATCATTCACATTCCCTCATTGAGAATAGATTTCGTCAAGCTTGATTGCTaGAACTTCCTTGTTCACACT | + |
|
Preference number: 2 (lower is better) Translates to: FSMPTFTIIHIPSLRIDFVKLDC*NFLVHT Trigger: AGTGTGAACAAGGAAGTTTCAGCAATCAAGCTTGAC...GAAATCTATTCTCAATGAGGGAATGTGAATGATGGTAAATGTGGGCATGGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCAATATAACTAGACTCTGCCCAAAGAGATTGAATTTGGCCTTAGGTTATAAATTCTGCAGCCATCTTTaGCAAAGGCCCAATGCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LNITRLCPKRLNLALGYKFCSHL*QRPNAE Trigger: TTCAGCATTGGGCCTTTGTCAAAGATGGCTGCAGAA...TTTATAACCTAAGGCCAAATTCAATCTCTTTGGGCAGAGTCTAGTTATATTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR GCA 90 bp | ATACATGATTCTATGATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTCTTTGTAGCCATTTCTaGAGGTTTTTGACCATGGTT | + |
|
Preference number: 2 (lower is better) Translates to: IHDSMILYGLLHPWPYTSLCSHF*RFLTMV Trigger: AACCATGGTCAAAAACCTGCAGAAATGGCTACAAAG...AGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATCATAGAATCATGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR GCA 90 bp | TCATTGAGAATAGATTTCAATGGGTGTAAATCATGTCAGCTTTCACTCTGGGAATTGCACACAGACTGGTaGCATTCTCTTAGTGCACAT | + |
|
Preference number: 2 (lower is better) Translates to: SLRIDFNGCKSCQLSLWELHTDW*HSLSAH Trigger: ATGTGCACTAAGAGAATGGCACCAGTCTGTGTGCAA...TTCCCAGAGTGAAAGCTGACATGATTTACACCCATTGAAATCTATTCTCAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CCA 90 bp | AAACATGTCTGTGTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCATTCCTCTGTTTATTTaGATACTGATCTTCCGGACA | + |
|
Preference number: 2 (lower is better) Translates to: KHVCVSSVSLHMLSSMFSIPLFI*ILIFRT Trigger: TGTCCGGAAGATCAGTATCCAAATAAACAGAGGAAT...GGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAACACAGACATGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR TCA 90 bp | TCATTGAGAATAGATTTCAATGGGTGTAAATCATGTCAGCTTTCACTCTGGGAATCTGTGTTTCCTCTGTaGGTCTTCATATGCTCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: SLRIDFNGCKSCQLSLWESVFPL*VFICSH Trigger: ATGAGAGCATATGAAGACTCACAGAGGAAACACAGA...TTCCCAGAGTGAAAGCTGACATGATTTACACCCATTGAAATCTATTCTCAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCAATATAACTAGACTCTGCCCAAAGAGATTGAATTTGGCCTTAGGTTATAAATCAGGTAAGTGGGTATaGAAGAAATCCACACACTGC | + |
|
Preference number: 2 (lower is better) Translates to: LNITRLCPKRLNLALGYKSGKWV*KKSTHC Trigger: GCAGTGTGTGGATTTCTTTCATACCCACTTACCTGA...TTTATAACCTAAGGCCAAATTCAATCTCTTTGGGCAGAGTCTAGTTATATTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CCA 90 bp | ATACATGATTCTATGATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTGCAGATGCCACTGTTTaGAAAAATGTATTGACTACA | + |
|
Preference number: 2 (lower is better) Translates to: IHDSMILYGLLHPWPYTSADATV*KNVLTT Trigger: TGTAGTCAATACATTTTTCCAAACAGTGGCATCTGC...AGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATCATAGAATCATGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR TCA 90 bp | TCATTGAGAATAGATTTCAATGGGTGTAAATCATGTCAGCTTTCACTCTGGGAAGGATACATGATTCTATaGTTCTCTATGGTCTGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: SLRIDFNGCKSCQLSLWEGYMIL*FSMVCC Trigger: GCAACAGACCATAGAGAATCATAGAATCATGTATCC...TTCCCAGAGTGAAAGCTGACATGATTTACACCCATTGAAATCTATTCTCAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCAAAACTACTCTGAGATTCGACCTTACACCAGTCAGAATGGTTACAATCAAAATATGGAACCTGAATTaGCCATCTTCTTTAACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: IKTTLRFDLTPVRMVTIKIWNLN*PSSLTR Trigger: CCTGGTTAAAGAAGATGGTCAATTCAGGTTCCATAT...TTTGATTGTAACCATTCTGACTGGTGTAAGGTCGAATCTCAGAGTAGTTTTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTCCATGCCCACATTTACCATCATTCACATTCCCTCATTGAGAATAGATTTCTTTGCTAAATCCAAGTaGACAACTTTGACTGCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: FSMPTFTIIHIPSLRIDFFAKSK*TTLTAN Trigger: GTTTGCAGTCAAAGTTGTCCACTTGGATTTAGCAAA...GAAATCTATTCTCAATGAGGGAATGTGAATGATGGTAAATGTGGGCATGGAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR CAA 90 bp | AATAACGACTTCACGAAATTCACATGCAGACTAGAAAATATCATATaGAGTGAAGTAACCCAGTCACAAAAGAACACATGGTATGTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: NNDFTKFTCRLENII*SEVTQSQKNTWYVL Trigger: GAGCACATACCATGTGTTCTTTTGTGACTGGGTTACTTCACTCAATATGATATTTTCTAGTCTGCATGTGAATTTCGTGAAGTCGTTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR TCA 90 bp | AATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAAAATACAATCCCAAAATAAGAGAAGATATCTaGAAGCCCACATGGTTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: NEGLCQDSRNDNGKYNPKIREDI*KPTWFR Trigger: CCTAAACCATGTGGGCTTTCAGATATCTTCTCTTAT...TTTGGGATTGTATTTTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR TCA 90 bp | TCATTGAGAATAGATTTCAATGGGTGTAAATCATGTCAGCTTTCACTCTGGGAAATTTCTGCAGGTTTTTaGCCATGGTTAAACAGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: SLRIDFNGCKSCQLSLWEISAGF*PWLNSD Trigger: ATCACTGTTTAACCATGGTCAAAAACCTGCAGAAAT...TTCCCAGAGTGAAAGCTGACATGATTTACACCCATTGAAATCTATTCTCAATGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR TCA 90 bp | TCATTGAGAATAGATTTCAATGGGTGTAAATCATGTCAGCTTTCACTCTGGGAAATTTTAGGGAGACACTaGTTCCTCTGTTTATTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: SLRIDFNGCKSCQLSLWEILGRH*FLCLFG Trigger: TCCAAATAAACAGAGGAATCAGTGTCTCCCTAAAAT...TTCCCAGAGTGAAAGCTGACATGATTTACACCCATTGAAATCTATTCTCAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR GCA 90 bp | AATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAAAATACAATCCCAAAATGTCCGGGATTCAATaGATAGCACTGAGAGATATT | + |
|
Preference number: 2 (lower is better) Translates to: NEGLCQDSRNDNGKYNPKMSGIQ*IALRDI Trigger: AATATCTCTCAGTGCTATGCATTGAATCCCGGACAT...TTTGGGATTGTATTTTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCAAAACTACTCTGAGATTCGACCTTACACCAGTCAGAATGGTTACAATCAAAGCAGATGCCACTGTTTaGAAAAATGTATTGACTACA | + |
|
Preference number: 2 (lower is better) Translates to: IKTTLRFDLTPVRMVTIKADATV*KNVLTT Trigger: TGTAGTCAATACATTTTTCCAAACAGTGGCATCTGC...TTTGATTGTAACCATTCTGACTGGTGTAAGGTCGAATCTCAGAGTAGTTTTGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CCA 90 bp | TCATTGAGAATAGATTTCAATGGGTGTAAATCATGTCAGCTTTCACTCTGGGAATTATCTAATCTGTGTTaGCTTGGTTCACTGTGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: SLRIDFNGCKSCQLSLWELSNLC*LGSLCL Trigger: TAGACACAGTGAACCAAGCCAACACAGATTAGATAA...TTCCCAGAGTGAAAGCTGACATGATTTACACCCATTGAAATCTATTCTCAATGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCAATATAACTAGACTCTGCCCAAAGAGATTGAATTTGGCCTTAGGTTATAAATGCAATTTCTCCATCTaGACATGGGACACAATCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LNITRLCPKRLNLALGYKCNFSI*TWDTIK Trigger: TTTGATTGTGTCCCATGTCCAGATGGAGAAATTGCA...TTTATAACCTAAGGCCAAATTCAATCTCTTTGGGCAGAGTCTAGTTATATTGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAAAATACAATCCCAAATTTGCTAAATCCAAGTaGACAACTTTGACTGCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: NEGLCQDSRNDNGKYNPKFAKSK*TTLTAN Trigger: GTTTGCAGTCAAAGTTGTCCACTTGGATTTAGCAAA...TTTGGGATTGTATTTTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAAAATACAATCCCAAAGGATCACATAGCATTTaGGAAGAAATATACATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: NEGLCQDSRNDNGKYNPKGSHSI*EEIYIP Trigger: TGGGATGTATATTTCTTCCCAAATGCTATGTGATCC...TTTGGGATTGTATTTTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCAATATAACTAGACTCTGCCCAAAGAGATTGAATTTGGCCTTAGGTTATAAATGGAAATTAATTTCATaGGATTCAGACACCTTCATG | + |
|
Preference number: 2 (lower is better) Translates to: LNITRLCPKRLNLALGYKWKLIS*DSDTFM Trigger: CATGAAGGTGTCTGAATCCCATGAAATTAATTTCCA...TTTATAACCTAAGGCCAAATTCAATCTCTTTGGGCAGAGTCTAGTTATATTGAG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR CCA 72 bp | TCAAGCCATGAGAGGCAACCCATGAAAGACATTGCCTaGATGGCTAGGAACCAGAAGCTGGGTGGCTCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: SSHERQPMKDIA*MARNQKLGGSE Trigger: CTCGGAGCCACCCAGCTTCTGGTTCCTAGCCATCCAGGCAATGTCTTTCATGGGTTGCCTCTCATGGCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CAA 90 bp | GCATGTCAACATCAGGGAAAGGAGGATATGTTCCCAGCCAGACTGCACAGATGCCACAGAGACTTCATCTaGCAACTGATGGGAGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: ACQHQGKEDMFPARLHRCHRDFI*QLMGVG Trigger: ACCCACTCCCATCAGTTGCAAGATGAAGTCTCTGTG...GCATCTGTGCAGTCTGGCTGGGAACATATCCTCCTTTCCCTGATGTTGACATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR TCA 72 bp | AGAAAGCAAGGGTGGACCCCTCGTTACACCAGAGGATaGCTTGCCCAAACTCTGACTGCATGTCAACATCAG | + |
|
Preference number: 3 (lower is better) Translates to: RKQGWTPRYTRG*LAQTLTACQHQ Trigger: CTGATGTTGACATGCAGTCAGAGTTTGGGCAAGTCATCCTCTGGTGTAACGAGGGGTCCACCCTTGCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR CCA 72 bp | TGTGGAAGCGCCATTCCCCACCAAGGCCAAACATTCTaGCAGAACTTCAGGTATGCTAGTTGCACACAGACT | + |
|
Preference number: 3 (lower is better) Translates to: CGSAIPHQGQTF*QNFRYASCTQT Trigger: AGTCTGTGTGCAACTAGCATACCTGAAGTTCTGCCAGAATGTTTGGCCTTGGTGGGGAATGGCGCTTCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR CCA 72 bp | GCACTTCTGCAACAGCTGCTCTCTCTGGGCAGAATTTaGATATGGAGAGGTATGGCAAAGGGTGAACTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: ALLQQLLSLGRI*IWRGMAKGELP Trigger: TGGGAGTTCACCCTTTGCCATACCTCTCCATATCCAAATTCTGCCCAGAGAGAGCAGCTGTTGCAGAAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CAA 90 bp | GCATGTCAACATCAGGGAAAGGAGGATATGTTCCCAGCCAGACTGCACAGATGCCCTGGTTTGATGGCTTaGAAAGCCACAACCACAATG | + |
|
Preference number: 3 (lower is better) Translates to: ACQHQGKEDMFPARLHRCPGLMA*KATTTM Trigger: CATTGTGGTTGTGGCTTTCAAAGCCATCAAACCAGG...GCATCTGTGCAGTCTGGCTGGGAACATATCCTCCTTTCCCTGATGTTGACATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR TCA 72 bp | CCCCTCGTTACACCAGAGGATGACTTGCCCAAACTCTaGCTGCATGTCAACATCAGGGAAAGGAGGATATGT | + |
|
Preference number: 3 (lower is better) Translates to: PLVTPEDDLPKL*LHVNIRERRIC Trigger: ACATATCCTCCTTTCCCTGATGTTGACATGCAGTCAGAGTTTGGGCAAGTCATCCTCTGGTGTAACGAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR TCA 72 bp | CCATGGTTTTGCCCTTCGAGCTCAGGTAAGTGGGTATaGAAGAAATCCACACACTGCAGAAACCCAGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: PWFCPSSSGKWV*KKSTHCRNPAC Trigger: GCATGCTGGGTTTCTGCAGTGTGTGGATTTCTTTCATACCCACTTACCTGAGCTCGAAGGGCAAAACCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR GCA 72 bp | GCCATTCTCTTAGTGCACATCCAGCCTTCTGCCAACTaGTTCTCTCATCTCTGTCACCATATTCTGCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: AILLVHIQPSAN*FSHLCHHILQP Trigger: TGGCTGCAGAATATGGTGACAGAGATGAGAGAAGCAGTTGGCAGAAGGCTGGATGTGCACTAAGAGAATGGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR CCA 72 bp | TGCTCTCTCTGGGCAGAATTTGGATATGGAGAGGTATaGCAAAGGGTGAACTCCCAGGCAAATGTGGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: CSLWAEFGYGEV*QRVNSQANVET Trigger: GGTTTCCACATTTGCCTGGGAGTTCACCCTTTGCCATACCTCTCCATATCCAAATTCTGCCCAGAGAGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR CCA 72 bp | GTGCTTCTCCCAACTTGGCCCTTTTGTAGGAATGGATaGAGCAGTGATCTCACATGTGACAGCACTTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: VLLPTWPFCRNG*SSDLTCDSTSA Trigger: TGCAGAAGTGCTGTCACATGTGAGATCACTGCTCCATCCATTCCTACAAAAGGGCCAAGTTGGGAGAAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR TCA 72 bp | AGATTTCTGAGTTCGAGTCCAGTCTGGTCTACAGACTaGGTTCCAGGACAACCAAGGCTACACAGAGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: RFLSSSPVWSTD*VPGQPRLHRET Trigger: GGTTTCTCTGTGTAGCCTTGGTTGTCCTGGAACTCAGTCTGTAGACCAGACTGGACTCGAACTCAGAAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR TCA 72 bp | GGGCAGAATTTGGATATGGAGAGGTATGGCAAAGGGTaGACTCCCAGGCAAATGTGGAAACCAGAAGAATCC | + |
|
Preference number: 3 (lower is better) Translates to: GQNLDMERYGKG*TPRQMWKPEES Trigger: GGATTCTTCTGGTTTCCACATTTGCCTGGGAGTTCACCCTTTGCCATACCTCTCCATATCCAAATTCTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR GCA 72 bp | GCATCTGGGAGACCATCTCATTCACAAACCATTGGATaGAAAATCTGTCCTGACTGCAAGATGTTCTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: ASGRPSHSQTIG*KICPDCKMFWG Trigger: GCCCCAGAACATCTTGCAGTCAGGACAGATTTTGCATCCAATGGTTTGTGAATGAGATGGTCTCCCAGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR GCA 72 bp | GACTGGTGCCATTCTCTTAGTGCACATCCAGCCTTCTaGCAACTGCTTCTCTCATCTCTGTCACCATATTCT | + |
|
Preference number: 3 (lower is better) Translates to: DWCHSLSAHPAF*QLLLSSLSPYS Trigger: AGAATATGGTGACAGAGATGAGAGAAGCAGTTGGCAGAAGGCTGGATGTGCACTAAGAGAATGGCACCAGTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR GCA 72 bp | GGCCAAACATTCTGGCAGAACTTCAGGTATGCTAGTTaGACACAGACTGGTGCCATTCTCTTAGTGCACATC | + |
|
Preference number: 3 (lower is better) Translates to: GQTFWQNFRYAS*TQTGAILLVHI Trigger: GATGTGCACTAAGAGAATGGCACCAGTCTGTGTGCAACTAGCATACCTGAAGTTCTGCCAGAATGTTTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR CCA 72 bp | GAGGAACACTCCTCCATTTTGGGTGGGATTGCAAGGTaGTACAACCAGTTTGGAAATCAGTCTGACAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: EEHSSILGGIAR*YNQFGNQSDSS Trigger: GGAACTGTCAGACTGATTTCCAAACTGGTTGTACCACCTTGCAATCCCACCCAAAATGGAGGAGTGTTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR CCA 72 bp | TTCACACTGTACTCCTCATTGGTGCTTCTCCCAACTTaGCCCTTTTGTAGGAATGGATGGAGCAGTGATCTC | + |
|
Preference number: 3 (lower is better) Translates to: FTLYSSLVLLPT*PFCRNGWSSDL Trigger: GAGATCACTGCTCCATCCATTCCTACAAAAGGGCCAAGTTGGGAGAAGCACCAATGAGGAGTACAGTGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCAACATCAGGGAAAGGAGGATATGTTCCCAGCCAGACTGCACAGATGCACACGGAAAAGTGATTAAGTaGCAGATGCCACTGTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VNIRERRICSQPDCTDAHGKVIK*QMPLFG Trigger: TCCAAACAGTGGCATCTGCAACTTAATCACTTTTCC...GTGTGCATCTGTGCAGTCTGGCTGGGAACATATCCTCCTTTCCCTGATGTTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGTCTTTAACCAGGGAGTaGTACCAGAGGTGCATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VSSVSLHMLSSMFSLSIESLTRE*YQRCIW Trigger: CCAGATGCACCTCTGGTACAACTCCCTGGTTAAAGA...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGATTCTCTATGGTCTGTaGCATCCTTGGCCCTATACC | + |
|
Preference number: 3 (lower is better) Translates to: VSSVSLHMLSSMFSLSIEILYGL*HPWPYT Trigger: GGTATAGGGCCAAGGATGCAACAGACCATAGAGAAT...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CAA 90 bp | GATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTTCTCCATGCCCACAGATTCCTCTGTTTATTaGGATACTGATCTTCCGGAC | + |
|
Preference number: 3 (lower is better) Translates to: DSLWSVASLALYLFSMPTDSSVY*DTDLPD Trigger: GTCCGGAAGATCAGTATCCAAATAAACAGAGGAATC...TGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAACACCAGTCCTCAACCCATGGACTGCCCCCACTCTCTCAGAACTTAGTAATCTCATTCACAAACCATaGGATGCAAAATCTGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RTPVLNPWTAPTLSELSNLIHKP*DAKSVL Trigger: CAGGACAGATTTTGCATCCAATGGTTTGTGAATGAG...ATTACTAAGTTCTGAGAGAGTGGGGGCAGTCCATGGGTTGAGGACTGGTGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR TCA 72 bp | ATCTCATTCACAAACCATTGGATGCAAAATCTGTCCTaGCTGCAAGATGTTCTGGGGCAATGGTGGCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ISFTNHWMQNLS*LQDVLGQWWLR Trigger: CCTGAGCCACCATTGCCCCAGAACATCTTGCAGTCAGGACAGATTTTGCATCCAATGGTTTGTGAATGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR TCA 72 bp | GCCAGTTATATCACCCCTGGGCATATACCAAATATCTaGGGAGCCAGTTATATCACCCCTGGGCATATACCA | + |
|
Preference number: 3 (lower is better) Translates to: ASYITPGHIPNI*GASYITPGHIP Trigger: TGGTATATGCCCAGGGGTGATATAACTGGCTCCTCAGATATTTGGTATATGCCCAGGGGTGATATAACTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR CCA 72 bp | TGTAGCAAAGGGTTACCTTATGGAGAATCAACGAGATaGGATGTCCTTTTTCCTGTGACACTCCATGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: CSKGLPYGESTR*DVLFPVTLHAP Trigger: TGGGGCATGGAGTGTCACAGGAAAAAGGACATCCCATCTCGTTGATTCTCCATAAGGTAACCCTTTGCTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CAA 90 bp | GCATGTCAACATCAGGGAAAGGAGGATATGTTCCCAGCCAGACTGCACAGATGCATTCACATTCCCTCATaGAGAATAGATTTCAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: ACQHQGKEDMFPARLHRCIHIPS*RIDFNG Trigger: CCCATTGAAATCTATTCTCAATGAGGGAATGTGAAT...GCATCTGTGCAGTCTGGCTGGGAACATATCCTCCTTTCCCTGATGTTGACATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCAACATCAGGGAAAGGAGGATATGTTCCCAGCCAGACTGCACAGATGCACACGCATATCTGTTTTATTaGCAATTTCTCCATCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VNIRERRICSQPDCTDAHAYLFY*QFLHLD Trigger: GTCCAGATGGAGAAATTGCAAATAAAACAGATATGC...GTGTGCATCTGTGCAGTCTGGCTGGGAACATATCCTCCTTTCCCTGATGTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGCCAAACATTCTGGCAGAACTTCAGGTATGCTAGTTGCACACAGACTGGTGATTCCTCTGTTTATTaGGATACTGATCTTCCGGAC | + |
|
Preference number: 3 (lower is better) Translates to: QGQTFWQNFRYASCTQTGDSSVY*DTDLPD Trigger: GTCCGGAAGATCAGTATCCAAATAAACAGAGGAATC...ACCAGTCTGTGTGCAACTAGCATACCTGAAGTTCTGCCAGAATGTTTGGCCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR CCA 72 bp | CATCTTGCAACTGATGGGAGTGGGTATAGCCCAGACTaGCTTCAAACTCATGATCCTTTTACAGTCATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: HLATDGSGYSPD*LQTHDPFTVMD Trigger: ATCCATGACTGTAAAAGGATCATGAGTTTGAAGCCAGTCTGGGCTATACCCACTCCCATCAGTTGCAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR CCA 72 bp | TTGCTGAAACTTCCTTGTTCACACTGTACTCCTCATTaGTGCTTCTCCCAACTTGGCCCTTTTGTAGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: LLKLPCSHCTPH*CFSQLGPFVGM Trigger: CATTCCTACAAAAGGGCCAAGTTGGGAGAAGCACCAATGAGGAGTACAGTGTGAACAAGGAAGTTTCAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGGGAAAAGTGATTAAGTaGCAGATGCCACTGTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VSSVSLHMLSSMFSLSIEGKVIK*QMPLFG Trigger: TCCAAACAGTGGCATCTGCAACTTAATCACTTTTCC...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGCCAAACATTCTGGCAGAACTTCAGGTATGCTAGTTGCACACAGACTGGTTTCTATGAAGGATGTTaGCTCTCTCAAGAGACTATC | + |
|
Preference number: 3 (lower is better) Translates to: QGQTFWQNFRYASCTQTGFYEGC*LSQETI Trigger: GATAGTCTCTTGAGAGAGCAAACATCCTTCATAGAA...ACCAGTCTGTGTGCAACTAGCATACCTGAAGTTCTGCCAGAATGTTTGGCCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAATCCACACACTGCAGAAACCCAGCATGCTGAATGTGATTGTTTTTGCCTCAAAGATGCTTCCTGGTTaGATGGCTTTGAAAGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: EIHTLQKPSMLNVIVFASKMLPG*MALKAT Trigger: TGTGGCTTTCAAAGCCATCAAACCAGGAAGCATCTT...TGAGGCAAAAACAATCACATTCAGCATGCTGGGTTTCTGCAGTGTGTGGATTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR CCA 72 bp | CATGATTCTATGATTCTCTATGGTCTGTTGCATCCTTaGCCCTATACCTCTTCTCCATGCCCACATTTACCA | + |
|
Preference number: 3 (lower is better) Translates to: HDSMILYGLLHP*PYTSSPCPHLP Trigger: TGGTAAATGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATCATAGAATCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGCTACACATGACATGTTaGAATATTCCAGCACAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: VSSVSLHMLSSMFSLSIELHMTC*NIPAQF Trigger: GAACTGTGCTGGAATATTCAAACATGTCATGTGTAG...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CAA 90 bp | GCATCCTTGGCCCTATACCTCTTCTCCATGCCCACATTTACCATCATTCACATTCTACACATGACATGTTaGAATATTCCAGCACAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ASLALYLFSMPTFTIIHILHMTC*NIPAQF Trigger: GAACTGTGCTGGAATATTCAAACATGTCATGTGTAG...AATGTGAATGATGGTAAATGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CAA 90 bp | GCATCCTTGGCCCTATACCTCTTCTCCATGCCCACATTTACCATCATTCACATTTTCTATGAAGGATGTTaGCTCTCTCAAGAGACTATC | + |
|
Preference number: 3 (lower is better) Translates to: ASLALYLFSMPTFTIIHIFYEGC*LSQETI Trigger: GATAGTCTCTTGAGAGAGCAAACATCCTTCATAGAA...AATGTGAATGATGGTAAATGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR TCA 72 bp | TCTCTCATCTCTGTCACCATATTCTGCAGCCATCTTTaGCAAAGGCCCAATGCTGAAACAGAGACTATGATA | + |
|
Preference number: 3 (lower is better) Translates to: SLISVTIFCSHL*QRPNAETETMI Trigger: TATCATAGTCTCTGTTTCAGCATTGGGCCTTTGTCAAAGATGGCTGCAGAATATGGTGACAGAGATGAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR GCA 72 bp | AGCAACAAGTCAAAGAACAGATTGCTAAGGATATTCTaGTATAGTCATGGAGCAGTGCCTAGTCCAGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SNKSKNRLLRIF*YSHGAVPSPGF Trigger: GAAACCTGGACTAGGCACTGCTCCATGACTATAGCAGAATATCCTTAGCAATCTGTTCTTTGACTTGTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CAA 90 bp | GCATCCTTGGCCCTATACCTCTTCTCCATGCCCACATTTACCATCATTCACATTATTCACATTCCCTCATaGAGAATAGATTTCAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: ASLALYLFSMPTFTIIHIIHIPS*RIDFNG Trigger: CCCATTGAAATCTATTCTCAATGAGGGAATGTGAAT...AATGTGAATGATGGTAAATGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR TCA 72 bp | TCTGAAAGCCCACATGGTTTAGGATACATGATTCTATaGTTCTCTATGGTCTGTTGCATCCTTGGCCCTATA | + |
|
Preference number: 3 (lower is better) Translates to: SESPHGLGYMIL*FSMVCCILGPI Trigger: TATAGGGCCAAGGATGCAACAGACCATAGAGAATCATAGAATCATGTATCCTAAACCATGTGGGCTTTCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATTGAGAATAGATTTCAATGGGTGTAAATCATGTCAGCTTTCACTCTGGGAAATTCTCTATGGTCTGTaGCATCCTTGGCCCTATACC | + |
|
Preference number: 3 (lower is better) Translates to: SLRIDFNGCKSCQLSLWEILYGL*HPWPYT Trigger: GGTATAGGGCCAAGGATGCAACAGACCATAGAGAAT...TTCCCAGAGTGAAAGCTGACATGATTTACACCCATTGAAATCTATTCTCAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCAATATAACTAGACTCTGCCCAAAGAGATTGAATTTGGCCTTAGGTTATAAATGCAGAGCCCAAGGATaGACCATTAACAATCCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LNITRLCPKRLNLALGYKCRAQG*TINNPS Trigger: GGAGGGATTGTTAATGGTCAATCCTTGGGCTCTGCA...TTTATAACCTAAGGCCAAATTCAATCTCTTTGGGCAGAGTCTAGTTATATTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR-3UTR CAA 90 bp | ATACATGATTCTATGATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTTGCAGATGCCACTGTTaGGAAAAATGTATTGACTAC | + |
|
Preference number: 3 (lower is better) Translates to: IHDSMILYGLLHPWPYTSCRCHC*EKCIDY Trigger: GTAGTCAATACATTTTTCCAAACAGTGGCATCTGCA...AGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATCATAGAATCATGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCCATGCCCACATTTACCATCATTCACATTCCCTCATTGAGAATAGATTTCGGAAAAGTGATTAAGTaGCAGATGCCACTGTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: FSMPTFTIIHIPSLRIDFGKVIK*QMPLFG Trigger: TCCAAACAGTGGCATCTGCAACTTAATCACTTTTCC...GAAATCTATTCTCAATGAGGGAATGTGAATGATGGTAAATGTGGGCATGGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACATGTCTGTGTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCGCATATCTGTTTTATTaGCAATTTCTCCATCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: KHVCVSSVSLHMLSSMFSAYLFY*QFLHLD Trigger: GTCCAGATGGAGAAATTGCAAATAAAACAGATATGC...GGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAACACAGACATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAAAATACAATCCCAAACCTGGTTTGATGGCTTaGAAAGCCACAACCACAATG | + |
|
Preference number: 3 (lower is better) Translates to: NEGLCQDSRNDNGKYNPKPGLMA*KATTTM Trigger: CATTGTGGTTGTGGCTTTCAAAGCCATCAAACCAGG...TTTGGGATTGTATTTTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR TCA 72 bp | CTGTGTCTAGTTGGCTCTAAGGATAACAGGGAAAAGTaGTTAAGTTGCAGATGCCACTGTTTGGAAAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: LCLVGSKDNREK*LSCRCHCLEKC Trigger: ACATTTTTCCAAACAGTGGCATCTGCAACTTAATCACTTTTCCCTGTTATCCTTAGAGCCAACTAGACACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR TCA 72 bp | GATACTCCTAACTCTAATAGAGAACAGCACTTTCTATaGAGGATGTTTGCTCTCTCAAGAGACTATCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: DTPNSNREQHFL*RMFALSRDYPL Trigger: CAGTGGATAGTCTCTTGAGAGAGCAAACATCCTTCATAGAAAGTGCTGTTCTCTATTAGAGTTAGGAGTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCCATGCCCACATTTACCATCATTCACATTCCCTCATTGAGAATAGATTTCCTACACATGACATGTTaGAATATTCCAGCACAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: FSMPTFTIIHIPSLRIDFLHMTC*NIPAQF Trigger: GAACTGTGCTGGAATATTCAAACATGTCATGTGTAG...GAAATCTATTCTCAATGAGGGAATGTGAATGATGGTAAATGTGGGCATGGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAAAATACAATCCCAAAAAGATGCTTCCTGGTTaGATGGCTTTGAAAGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: NEGLCQDSRNDNGKYNPKKMLPG*MALKAT Trigger: TGTGGCTTTCAAAGCCATCAAACCAGGAAGCATCTT...TTTGGGATTGTATTTTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR TCA 72 bp | ACAGGACTAAACAAAGAATTCTCACAGGAGGAATTCTaGATGGACAAGAAGCACCCAAAGAAATGTTCAACA | + |
|
Preference number: 3 (lower is better) Translates to: TGLNKEFSQEEF*MDKKHPKKCST Trigger: TGTTGAACATTTCTTTGGGTGCTTCTTGTCCATTCAGAATTCCTCCTGTGAGAATTCTTTGTTTAGTCCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR GCA 72 bp | AAACATCTAGTAGACACACCAAAGGCCATATACAGTTaGAATTATCTAATCTGTGTTGGCTTGGTTCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: KHLVDTPKAIYS*NYLICVGLVHC Trigger: ACAGTGAACCAAGCCAACACAGATTAGATAATTGCAACTGTATATGGCCTTTGGTGTGTCTACTAGATGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR TCA 72 bp | GACTCACCACAAGCAACTGAAAAAGGAGTATCTGTATaGGAAGAGCTTGTAATCTCTGAAGAAAGAAATCAT | + |
|
Preference number: 3 (lower is better) Translates to: DSPQATEKGVSV*EELVISEERNH Trigger: ATGATTTCTTTCTTCAGAGATTACAAGCTCTTCTCATACAGATACTCCTTTTTCAGTTGCTTGTGGTGAGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR GCA 72 bp | AGAAATGAGGAGGAGATAACTGAGATTTCTGTTATTTaGTCTGACAATGGGTGTTTCTCGATAGCAGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: RNEEEITEISVI*SDNGCFSIADK Trigger: TTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCAGTTATCTCCTCCTCATTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR CCA 72 bp | GATTTCAATGGGTGTAAATCATGTCAGCTTTCACTCTaGGAAGACAATTTGATACTCCTAACTCTAATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: DFNGCKSCQLSL*EDNLILLTLIE Trigger: CTCTATTAGAGTTAGGAGTATCAAATTGTCTTCCCAGAGTGAAAGCTGACATGATTTACACCCATTGAAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR CCA 72 bp | ATAATTTGTCTCAAGACACAAGTGACTGTTCTAGGTTaGCCAATGAATATTAGTGAGCAAAAGAAACAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: IICLKTQVTVLG*PMNISEQKKQS Trigger: GCTCTGTTTCTTTTGCTCACTAATATTCATTGGCCAACCTAGAACAGTCACTTGTGTCTTGAGACAAATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAAAATACAATCCCAAATGCAGATGCCACTGTTaGGAAAAATGTATTGACTAC | + |
|
Preference number: 3 (lower is better) Translates to: NEGLCQDSRNDNGKYNPKCRCHC*EKCIDY Trigger: GTAGTCAATACATTTTTCCAAACAGTGGCATCTGCA...TTTGGGATTGTATTTTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR TCA 72 bp | GATTGCAAGGTGGTACAACCAGTTTGGAAATCAGTCTaGCAGTTCCTTAGAATATTGGATATAGTAATATCT | + |
|
Preference number: 3 (lower is better) Translates to: DCKVVQPVWKSV*QFLRILDIVIS Trigger: AGATATTACTATATCCAATATTCTAAGGAACTGTCAGACTGATTTCCAAACTGGTTGTACCACCTTGCAATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR TCA 72 bp | AAGAGCACCAATGACTTATACTCTAAGATCAAGAATTaGCAAAAGGGACATCCTAAATTTGCAAAGCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: KSTNDLYSKIKN*QKGHPKFAKLP Trigger: TGGAAGCTTTGCAAATTTAGGATGTCCCTTTTGTCAATTCTTGATCTTAGAGTATAAGTCATTGGTGCTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR CCA 72 bp | CATAATTTTAGGGAGACACTGATTCCTCTGTTTATTTaGATACTGATCTTCCGGACACTTAATACATTGATG | + |
|
Preference number: 3 (lower is better) Translates to: HNFRETLIPLFI*ILIFRTLNTLM Trigger: CATCAATGTATTAAGTGTCCGGAAGATCAGTATCCAAATAAACAGAGGAATCAGTGTCTCCCTAAAATTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR TCA 90 bp | GATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTTCTCCATGCCCACAAGTTGGACAATTCCCTaGTACAGAGCTGCGGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DSLWSVASLALYLFSMPTSWTIP*YRAAVC Trigger: GCACACCGCAGCTCTGTATCAGGGAATTGTCCAACT...TGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR CCA 90 bp | GATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTTCTCCATGCCCACATGGATGGAGCTTCCATaGATGAGGAGCTTGGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: DSLWSVASLALYLFSMPTWMELP*MRSLEY Trigger: ATACTCCAAGCTCCTCATCCATGGAAGCTCCATCCA...TGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
||
| CDS-3UTR CCA 90 bp | GATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTTCTCCATGCCCACATCCTGGATCCTTCCATaGATGAGGAGCTTGGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: DSLWSVASLALYLFSMPTSWILP*MRSLEY Trigger: ATACTCCAAGCTCCTCATCCATGGAAGGATCCAGGA...TGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233622.2 |
||
| CDS-3UTR CCA 90 bp | GCATGTCAACATCAGGGAAAGGAGGATATGTTCCCAGCCAGACTGCACAGATGCAACAGCTGCTCTCTCTaGGCAGAATTTGGATATGGA | + |
|
Preference number: 4 (lower is better) Translates to: ACQHQGKEDMFPARLHRCNSCSL*AEFGYG Trigger: TCCATATCCAAATTCTGCCCAGAGAGAGCAGCTGTT...GCATCTGTGCAGTCTGGCTGGGAACATATCCTCCTTTCCCTGATGTTGACATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233622.2 |
||
| CDS-3UTR TCA 90 bp | CAACTGATGGGAGTGGGTATAGCCCAGACTGGCTTCAAACTCATGATCCTTTTAAATCTCCTTCCACTCTaGGTGACAGCTCCTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: QLMGVGIAQTGFKLMILLNLLPL*VTAPHG Trigger: TCCATGAGGAGCTGTCACTCAGAGTGGAAGGAGATT...TAAAAGGATCATGAGTTTGAAGCCAGTCTGGGCTATACCCACTCCCATCAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| CDS-3UTR TCA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGCGTTACACCAGAGGATaGCTTGCCCAAACTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: VSSVSLHMLSSMFSLSIERYTRG*LAQTLT Trigger: AGTCAGAGTTTGGGCAAGTCATCCTCTGGTGTAACG...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
||
| CDS-3UTR GCA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGTGTACTCCTCATTGGTaGTTCTCCCAACTTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSSVSLHMLSSMFSLSIECTPHW*FSQLGP Trigger: AGGGCCAAGTTGGGAGAAGCACCAATGAGGAGTACA...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
||
| CDS-3UTR CCA 90 bp | GCATCCTTGGCCCTATACCTCTTCTCCATGCCCACATTTACCATCATTCACATTCACTGTACTCCTCATTaGTGCTTCTCCCAACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASLALYLFSMPTFTIIHIHCTPH*CFSQLG Trigger: GCCAAGTTGGGAGAAGCACCAATGAGGAGTACAGTG...AATGTGAATGATGGTAAATGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
||
| CDS-3UTR TCA 90 bp | CTTTCTATGAAGGATGTTTGCTCTCTCAAGAGACTATCCACTGATGTGTTGGATTCCTTCCACTCTGAGTaGCAGCTCCTCATGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSMKDVCSLKRLSTDVLDSFHSE*QLLMEC Trigger: GCACTCCATGAGGAGCTGTCACTCAGAGTGGAAGGA...ATCCAACACATCAGTGGATAGTCTCTTGAGAGAGCAAACATCCTTCATAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR TCA 90 bp | GTGAGATTCAAAGACAAATTCGCCAACCTTCACATGAGCTTCAGTACCACTCTGAATCTCCTTCCACTCTaGGTGACAGCTCCTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRFKDKFANLHMSFSTTLNLLPL*VTAPHG Trigger: TCCATGAGGAGCTGTCACTCAGAGTGGAAGGAGATT...CAGAGTGGTACTGAAGCTCATGTGAAGGTTGGCGAATTTGTCTTTGAATCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR CAA 72 bp | ATATACATCCCAGTAAGCCAGCACTGGAGGCTAGAATaGAAAGAATTTCCACGGCCACCATGGTTTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IYIPVSQHWRLE*KEFPRPPWFCP Trigger: AGGGCAAAACCATGGTGGCCGTGGAAATTCTTTCAATTCTAGCCTCCAGTGCTGGCTTACTGGGATGTATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR TCA 90 bp | GATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTTCTCCATGCCCACAAGAACTCGGGAGATCTaGATGGATATTGATGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DSLWSVASLALYLFSMPTRTREI*MDIDVE Trigger: TTCAACATCAATATCCATTCAGATCTCCCGAGTTCT...TGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR GCA 90 bp | GATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTTCTCCATGCCCACAGTGGACAACTTTGACTaGAAACAGATAAAGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSLWSVASLALYLFSMPTVDNFD*KQIKES Trigger: AGACTCCTTTATCTGTTTGCAGTCAAAGTTGTCCAC...TGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
||
| CDS-3UTR CCA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGGCAACACAAATTCCATaGCTGATCATCTCCTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VSSVSLHMLSSMFSLSIEATQIP*LIISSV Trigger: TACCGAGGAGATGATCAGCCATGGAATTTGTGTTGC...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR CAA 72 bp | GAGGTGCATCTGGGAGACCATCTCATTCACAAACCATaGGATGCAAAATCTGTCCTGACTGCAAGATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EVHLGDHLIHKP*DAKSVLTARCS Trigger: AGAACATCTTGCAGTCAGGACAGATTTTGCATCCAATGGTTTGTGAATGAGATGGTCTCCCAGATGCACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| CDS-3UTR TCA 90 bp | ATCAAAACTACTCTGAGATTCGACCTTACACCAGTCAGAATGGTTACAATCAAATCCTTCCACTCTGAGTaGCAGCTCCTCATGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IKTTLRFDLTPVRMVTIKSFHSE*QLLMEC Trigger: GCACTCCATGAGGAGCTGTCACTCAGAGTGGAAGGA...TTTGATTGTAACCATTCTGACTGGTGTAAGGTCGAATCTCAGAGTAGTTTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| CDS-3UTR TCA 90 bp | GCATCCTTGGCCCTATACCTCTTCTCCATGCCCACATTTACCATCATTCACATTGTCAAGCTTGATTGCTaGAACTTCCTTGTTCACACT | + |
|
Preference number: 4 (lower is better) Translates to: ASLALYLFSMPTFTIIHIVKLDC*NFLVHT Trigger: AGTGTGAACAAGGAAGTTTCAGCAATCAAGCTTGAC...AATGTGAATGATGGTAAATGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
||
| CDS-3UTR TCA 90 bp | GCATCCTTGGCCCTATACCTCTTCTCCATGCCCACATTTACCATCATTCACATTCCAAGTGGACAACTTTaGCTGCAAACAGATAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASLALYLFSMPTFTIIHIPSGQL*LQTDKG Trigger: TCCTTTATCTGTTTGCAGTCAAAGTTGTCCACTTGG...AATGTGAATGATGGTAAATGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
||
| CDS-3UTR CCA 90 bp | GTGAGATTCAAAGACAAATTCGCCAACCTTCACATGAGCTTCAGTACCACTCTGGCAACACAAATTCCATaGCTGATCATCTCCTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VRFKDKFANLHMSFSTTLATQIP*LIISSV Trigger: TACCGAGGAGATGATCAGCCATGGAATTTGTGTTGC...CAGAGTGGTACTGAAGCTCATGTGAAGGTTGGCGAATTTGTCTTTGAATCTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR TCA 90 bp | ATCAAAACTACTCTGAGATTCGACCTTACACCAGTCAGAATGGTTACAATCAAAAGTTGGACAATTCCCTaGTACAGAGCTGCGGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IKTTLRFDLTPVRMVTIKSWTIP*YRAAVC Trigger: GCACACCGCAGCTCTGTATCAGGGAATTGTCCAACT...TTTGATTGTAACCATTCTGACTGGTGTAAGGTCGAATCTCAGAGTAGTTTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| CDS-3UTR TCA 90 bp | TCATTGAGAATAGATTTCAATGGGTGTAAATCATGTCAGCTTTCACTCTGGGAAAGTTGGACAATTCCCTaGTACAGAGCTGCGGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRIDFNGCKSCQLSLWESWTIP*YRAAVC Trigger: GCACACCGCAGCTCTGTATCAGGGAATTGTCCAACT...TTCCCAGAGTGAAAGCTGACATGATTTACACCCATTGAAATCTATTCTCAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR TCA 90 bp | ATACATGATTCTATGATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTACAGATAAAGGAGTCTaGTTGTGGTGCTCACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IHDSMILYGLLHPWPYTSTDKGV*LWCSPQ Trigger: TTGGGGTGAGCACCACAATCAGACTCCTTTATCTGT...AGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATCATAGAATCATGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
||
| CDS-3UTR TCA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGTTCTGTTATTTGCTCTaGCAATGGGTGTTTCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: VSSVSLHMLSSMFSLSIEFCYLL*QWVFLD Trigger: ATCGAGAAACACCCATTGTCAGAGCAAATAACAGAA...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
||
| CDS-3UTR GCA 90 bp | GATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTTCTCCATGCCCACATTCTGTAACCTTTTCTaGAAATGCAACACAAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSLWSVASLALYLFSMPTFCNLF*KCNTNS Trigger: GGAATTTGTGTTGCATTTGCAGAAAAGGTTACAGAA...TGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR CCA 90 bp | AAACATGTCTGTGTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCGCAACACAAATTCCATaGCTGATCATCTCCTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KHVCVSSVSLHMLSSMFSATQIP*LIISSV Trigger: TACCGAGGAGATGATCAGCCATGGAATTTGTGTTGC...GGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAACACAGACATGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR CAA 72 bp | ATCCCCATTTTTAAGATGCTTCCTGGTTTGATGGCTTaGAAAGCCACAACCACAATGAAGGTCTTTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IPIFKMLPGLMA*KATTTMKVFAK Trigger: CTTGGCAAAGACCTTCATTGTGGTTGTGGCTTTCAAAGCCATCAAACCAGGAAGCATCTTAAAAATGGGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR TCA 90 bp | ATACATGATTCTATGATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTCAAAAGGAGCATAGCTaGTCTGTGGGACTTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IHDSMILYGLLHPWPYTSQKEHS*SVGLCR Trigger: TCTACAAAGTCCCACAGATCAGCTATGCTCCTTTTG...AGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATCATAGAATCATGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCTATGAAGGATGTTTGCTCTCTCAAGAGACTATCCACTGATGTGTTGGATCAAAAGGAGCATAGCTaGTCTGTGGGACTTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSMKDVCSLKRLSTDVLDQKEHS*SVGLCR Trigger: TCTACAAAGTCCCACAGATCAGCTATGCTCCTTTTG...ATCCAACACATCAGTGGATAGTCTCTTGAGAGAGCAAACATCCTTCATAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR TCA 90 bp | CAAGTGGACAACTTTGACTGCAAACAGATAAAGGAGTCTGATTGTGGTGCTCACCAAAGGGTAATGTGGTaGTATACCAATCAGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QVDNFDCKQIKESDCGAHQRVMW*YTNQKL Trigger: CAACTTCTGATTGGTATATCACCACATTACCCTTTG...GTGAGCACCACAATCAGACTCCTTTATCTGTTTGCAGTCAAAGTTGTCCACTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR TCA 90 bp | TCATTGAGAATAGATTTCAATGGGTGTAAATCATGTCAGCTTTCACTCTGGGAAAATCTCCTTCCACTCTaGGTGACAGCTCCTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLRIDFNGCKSCQLSLWENLLPL*VTAPHG Trigger: TCCATGAGGAGCTGTCACTCAGAGTGGAAGGAGATT...TTCCCAGAGTGAAAGCTGACATGATTTACACCCATTGAAATCTATTCTCAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR TCA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGATTTTAGGGAGACACTaGTTCCTCTGTTTATTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSSVSLHMLSSMFSLSIEILGRH*FLCLFG Trigger: TCCAAATAAACAGAGGAATCAGTGTCTCCCTAAAAT...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
||
| CDS-3UTR GCA 90 bp | TCATTGAGAATAGATTTCAATGGGTGTAAATCATGTCAGCTTTCACTCTGGGAACACCAGAGGATGACTTaGCCAAACTCTGACTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SLRIDFNGCKSCQLSLWEHQRMT*PNSDCM Trigger: CATGCAGTCAGAGTTTGGGCAAGTCATCCTCTGGTG...TTCCCAGAGTGAAAGCTGACATGATTTACACCCATTGAAATCTATTCTCAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
||
| CDS-3UTR CCA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGTTTGCTAAATCCAAGTaGACAACTTTGACTGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSSVSLHMLSSMFSLSIEFAKSK*TTLTAN Trigger: GTTTGCAGTCAAAGTTGTCCACTTGGATTTAGCAAA...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
||
| CDS-3UTR TCA 90 bp | AAACATGTCTGTGTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCAAAGGGTAATGTGGTaGTATACCAATCAGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KHVCVSSVSLHMLSSMFSQRVMW*YTNQKL Trigger: CAACTTCTGATTGGTATATCACCACATTACCCTTTG...GGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAACACAGACATGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR TCA 90 bp | TCATTGAGAATAGATTTCAATGGGTGTAAATCATGTCAGCTTTCACTCTGGGAATGGAGCTTCCATGGATaGGGAGCTTGGAGTATAACT | + |
|
Preference number: 4 (lower is better) Translates to: SLRIDFNGCKSCQLSLWEWSFHG*GAWSIT Trigger: AGTTATACTCCAAGCTCCTCATCCATGGAAGCTCCA...TTCCCAGAGTGAAAGCTGACATGATTTACACCCATTGAAATCTATTCTCAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
||
| CDS-3UTR CCA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGCGCAAAAACATATTCTaGTATATGGCTTGTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSSVSLHMLSSMFSLSIERKNIF*YMACIF Trigger: GAAGATACAAGCCATATACCAGAATATGTTTTTGCG...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCCATGCCCACATTTACCATCATTCACATTCCCTCATTGAGAATAGATTTCTTCTTCTTCCATGGATaGGGAGCTTGGAGTATAACT | + |
|
Preference number: 4 (lower is better) Translates to: FSMPTFTIIHIPSLRIDFFFFHG*GAWSIT Trigger: AGTTATACTCCAAGCTCCTCATCCATGGAAGAAGAA...GAAATCTATTCTCAATGAGGGAATGTGAATGATGGTAAATGTGGGCATGGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| CDS-3UTR GCA 90 bp | GAAATCCACACACTGCAGAAACCCAGCATGCTGAATGTGATTGTTTTTGCCTCATTCTGTAACCTTTTCTaGAAATGCAACACAAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: EIHTLQKPSMLNVIVFASFCNLF*KCNTNS Trigger: GGAATTTGTGTTGCATTTGCAGAAAAGGTTACAGAA...TGAGGCAAAAACAATCACATTCAGCATGCTGGGTTTCTGCAGTGTGTGGATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGATTCAAAGACAAATTCGCCAACCTTCACATGAGCTTCAGTACCACTCTGACATATTCTGGTATATaGCTTGTATCTTCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRFKDKFANLHMSFSTTLTYSGI*LVSSMP Trigger: TGGCATTGAAGATACAAGCCATATACCAGAATATGT...CAGAGTGGTACTGAAGCTCATGTGAAGGTTGGCGAATTTGTCTTTGAATCTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR CCA 90 bp | GAAATCCACACACTGCAGAAACCCAGCATGCTGAATGTGATTGTTTTTGCCTCACGCAAAAACATATTCTaGTATATGGCTTGTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EIHTLQKPSMLNVIVFASRKNIF*YMACIF Trigger: GAAGATACAAGCCATATACCAGAATATGTTTTTGCG...TGAGGCAAAAACAATCACATTCAGCATGCTGGGTTTCTGCAGTGTGTGGATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR CCA 90 bp | ATACATGATTCTATGATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTGTGACTGTTCTAGGTTaGCCAATGAATATTAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IHDSMILYGLLHPWPYTSVTVLG*PMNISE Trigger: CTCACTAATATTCATTGGCCAACCTAGAACAGTCAC...AGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATCATAGAATCATGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
||
| 3UTR CAA 72 bp | GAAACATCTAGTAGACACACCAAAGGCCATATACAGTaGCAATTATCTAATCTGTGTTGGCTTGGTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ETSSRHTKGHIQ*QLSNLCWLGSL Trigger: CAGTGAACCAAGCCAACACAGATTAGATAATTGCAACTGTATATGGCCTTTGGTGTGTCTACTAGATGTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR CAA 72 bp | TCTCAGAACTTAGTAATGAAGGATATGGAACCTGAATaGACCATCTTCTTTAACCAGGGAGTTGTACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQNLVMKDMEPE*TIFFNQGVVPE Trigger: CTCTGGTACAACTCCCTGGTTAAAGAAGATGGTCAATTCAGGTTCCATATCCTTCATTACTAAGTTCTGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCCATGCCCACATTTACCATCATTCACATTCCCTCATTGAGAATAGATTTCAGAACTCGGGAGATCTaGATGGATATTGATGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSMPTFTIIHIPSLRIDFRTREI*MDIDVE Trigger: TTCAACATCAATATCCATTCAGATCTCCCGAGTTCT...GAAATCTATTCTCAATGAGGGAATGTGAATGATGGTAAATGTGGGCATGGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCCATGCCCACATTTACCATCATTCACATTCCCTCATTGAGAATAGATTTCCAAAGGGTAATGTGGTaGTATACCAATCAGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSMPTFTIIHIPSLRIDFQRVMW*YTNQKL Trigger: CAACTTCTGATTGGTATATCACCACATTACCCTTTG...GAAATCTATTCTCAATGAGGGAATGTGAATGATGGTAAATGTGGGCATGGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR CCA 90 bp | AAACATGTCTGTGTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCACATATTCTGGTATATaGCTTGTATCTTCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KHVCVSSVSLHMLSSMFSTYSGI*LVSSMP Trigger: TGGCATTGAAGATACAAGCCATATACCAGAATATGT...GGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAACACAGACATGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR CAA 72 bp | ATAAACCACAACAAGAGCAACAAGTCAAAGAACAGATaGCTAAGGATATTCTGCTATAGTCATGGAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: INHNKSNKSKNR*LRIFCYSHGAV Trigger: CACTGCTCCATGACTATAGCAGAATATCCTTAGCAATCTGTTCTTTGACTTGTTGCTCTTGTTGTGGTTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| 3UTR CAA 72 bp | TGTAAATCATGTCAGCTTTCACTCTGGGAAGACAATTaGATACTCCTAACTCTAATAGAGAACAGCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CKSCQLSLWEDN*ILLTLIENSTF Trigger: GAAAGTGCTGTTCTCTATTAGAGTTAGGAGTATCAAATTGTCTTCCCAGAGTGAAAGCTGACATGATTTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| 3UTR CAA 72 bp | CTAAGATCAAGAATTGACAAAAGGGACATCCTAAATTaGCAAAGCTTCCATAAGGCAAAGGACACTGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LRSRIDKRDILN*QSFHKAKDTVN Trigger: ATTGACAGTGTCCTTTGCCTTATGGAAGCTTTGCAAATTTAGGATGTCCCTTTTGTCAATTCTTGATCTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
||
| CDS-3UTR TCA 90 bp | AATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAAAATACAATCCCAAAAGAACTCGGGAGATCTaGATGGATATTGATGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NEGLCQDSRNDNGKYNPKRTREI*MDIDVE Trigger: TTCAACATCAATATCCATTCAGATCTCCCGAGTTCT...TTTGGGATTGTATTTTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR CCA 90 bp | AATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAAAATACAATCCCAAAACATATTCTGGTATATaGCTTGTATCTTCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NEGLCQDSRNDNGKYNPKTYSGI*LVSSMP Trigger: TGGCATTGAAGATACAAGCCATATACCAGAATATGT...TTTGGGATTGTATTTTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR CAA 90 bp | GTCAACATCAGGGAAAGGAGGATATGTTCCCAGCCAGACTGCACAGATGCACACTGCTCAGGCTGCCATTaGGCTCACATTGACTTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: VNIRERRICSQPDCTDAHCSGCH*AHIDLD Trigger: ATCTAAGTCAATGTGAGCCAAATGGCAGCCTGAGCA...GTGTGCATCTGTGCAGTCTGGCTGGGAACATATCCTCCTTTCCCTGATGTTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS TCA 90 bp | GAAGCTGGACTCTGGTCCCAAGAATCTGGTCAAAAGGAGCATAGCTaGTCTGTGGGACTTTGTAGAGACTTAGAACTCGGGAGATCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: EAGLWSQESGQKEHS*SVGLCRDLELGRSE Trigger: TTCAGATCTCCCGAGTTCTAAGTCTCTACAAAGTCCCACAGATCAGCTATGCTCCTTTTGACCAGATTCTTGGGACCAGAGTCCAGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR CAA 90 bp | ATGGCCAAGGAGACAAGAACAGTTCCCAGTGGATCTTCATGGGCCAAAAATACCATCCCAGAGTCTGTGTaGGTAGTAATGTGGACATCC | + |
|
Preference number: 5 (lower is better) Translates to: MAKETRTVPSGSSWAKNTIPESV*VVMWTS Trigger: GGATGTCCACATTACTACCAACACAGACTCTGGGAT...GGTATTTTTGGCCCATGAAGATCCACTGGGAACTGTTCTTGTCTCCTTGGCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR CAA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGTGCTCAGGCTGCCATTaGGCTCACATTGACTTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: VSSVSLHMLSSMFSLSIECSGCH*AHIDLD Trigger: ATCTAAGTCAATGTGAGCCAAATGGCAGCCTGAGCA...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR CAA 90 bp | GATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTTCTCCATGCCCACAATTGTTTTTGCCTCATaGAAGCTGTCAGGTAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: DSLWSVASLALYLFSMPTIVFAS*KLSGSL Trigger: AAGGCTACCTGACAGCTTCAATGAGGCAAAAACAAT...TGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
||
| CDS-3UTR CAA 90 bp | GTGAGATTCAAAGACAAATTCGCCAACCTTCACATGAGCTTCAGTACCACTCTGCTCTCTGGGCAGAATTaGGATATGGAGAGGTATGGC | + |
|
Preference number: 5 (lower is better) Translates to: VRFKDKFANLHMSFSTTLLSGQN*DMERYG Trigger: GCCATACCTCTCCATATCCAAATTCTGCCCAGAGAG...CAGAGTGGTACTGAAGCTCATGTGAAGGTTGGCGAATTTGTCTTTGAATCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233622.2 |
||
| CDS-3UTR CAA 90 bp | GATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTTCTCCATGCCCACATCAATGAAGTTGACATaGAAGAGAAAGAATCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DSLWSVASLALYLFSMPTSMKLT*KRKNPR Trigger: CCTGGGATTCTTTCTCTTCAATGTCAACTTCATTGA...TGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS TCA 90 bp | CTCCCAACTTGGCCCTTTTGTAGGAATGGATGGAGCTTCCATGGATaGGGAGCTTGGAGTATAACTTTATCAAATGAATCTCCTTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LPTWPFCRNGWSFHG*GAWSITLSNESPST Trigger: AGTGGAAGGAGATTCATTTGATAAAGTTATACTCCAAGCTCCTCATCCATGGAAGCTCCATCCATTCCTACAAAAGGGCCAAGTTGGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
||
| CDS-3UTR CAA 90 bp | GATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTTCTCCATGCCCACAAGGGTATTTTCTAGGTaGAACACTTCTGAGAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: DSLWSVASLALYLFSMPTRVFSR*NTSEKI Trigger: GATTTTCTCAGAAGTGTTCAACCTAGAAAATACCCT...TGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
||
| CDS-3UTR CAA 90 bp | AAACATGTCTGTGTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCCTGGTTTGATGGCTTaGAAAGCCACAACCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: KHVCVSSVSLHMLSSMFSPGLMA*KATTTM Trigger: CATTGTGGTTGTGGCTTTCAAAGCCATCAAACCAGG...GGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAACACAGACATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
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| CDS-3UTR CAA 90 bp | AAACATGTCTGTGTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCACTGGAGGCTAGAATaGAAAGAATTTCCACGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KHVCVSSVSLHMLSSMFSHWRLE*KEFPRP Trigger: TGGCCGTGGAAATTCTTTCAATTCTAGCCTCCAGTG...GGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAACACAGACATGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
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| CDS-3UTR CAA 90 bp | GCATCCTTGGCCCTATACCTCTTCTCCATGCCCACATTTACCATCATTCACATTGAATGGATATTGATGTaGAAATGCCTCCTATCACTG | + |
|
Preference number: 5 (lower is better) Translates to: ASLALYLFSMPTFTIIHIEWILM*KCLLSL Trigger: CAGTGATAGGAGGCATTTCAACATCAATATCCATTC...AATGTGAATGATGGTAAATGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS-3UTR CAA 90 bp | GTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGGAATGGATATTGATGTaGAAATGCCTCCTATCACTG | + |
|
Preference number: 5 (lower is better) Translates to: VSSVSLHMLSSMFSLSIEEWILM*KCLLSL Trigger: CAGTGATAGGAGGCATTTCAACATCAATATCCATTC...CTCTATGCTCAGGGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS-3UTR CAA 90 bp | GGAACCAGAAGCTGGGTGGCTCCGAGACCTAAGGTAGAACCAAATACAATAAACAGGGTATTTTCTAGGTaGAACACTTCTGAGAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: GTRSWVAPRPKVEPNTINRVFSR*NTSEKI Trigger: GATTTTCTCAGAAGTGTTCAACCTAGAAAATACCCT...GTTTATTGTATTTGGTTCTACCTTAGGTCTCGGAGCCACCCAGCTTCTGGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233160.2 |
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| CDS-3UTR CAA 90 bp | CTTTCTATGAAGGATGTTTGCTCTCTCAAGAGACTATCCACTGATGTGTTGGATATCCCAGAGTCTGTGTaGGTAGTAATGTGGACATCC | + |
|
Preference number: 5 (lower is better) Translates to: LSMKDVCSLKRLSTDVLDIPESV*VVMWTS Trigger: GGATGTCCACATTACTACCAACACAGACTCTGGGAT...ATCCAACACATCAGTGGATAGTCTCTTGAGAGAGCAAACATCCTTCATAGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS-3UTR CAA 90 bp | AAACATGTCTGTGTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCAAGATGCTTCCTGGTTaGATGGCTTTGAAAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: KHVCVSSVSLHMLSSMFSKMLPG*MALKAT Trigger: TGTGGCTTTCAAAGCCATCAAACCAGGAAGCATCTT...GGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAACACAGACATGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
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| CDS-3UTR CAA 90 bp | GTGAGATTCAAAGACAAATTCGCCAACCTTCACATGAGCTTCAGTACCACTCTGAACAAAATCTGCATCTaGATAGTAGCCAGAAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VRFKDKFANLHMSFSTTLNKICI*IVARRS Trigger: GCTTCTTCTGGCTACTATCAAGATGCAGATTTTGTT...CAGAGTGGTACTGAAGCTCATGTGAAGGTTGGCGAATTTGTCTTTGAATCTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS-3UTR CAA 90 bp | GCATCCTTGGCCCTATACCTCTTCTCCATGCCCACATTTACCATCATTCACATTAGATCTGAATGGATATaGATGTTGAAATGCCTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: ASLALYLFSMPTFTIIHIRSEWI*MLKCLL Trigger: TAGGAGGCATTTCAACATCAATATCCATTCAGATCT...AATGTGAATGATGGTAAATGTGGGCATGGAGAAGAGGTATAGGGCCAAGGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS-3UTR CAA 90 bp | AAACATGTCTGTGTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCGATTCCTCTGTTTATTaGGATACTGATCTTCCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KHVCVSSVSLHMLSSMFSDSSVY*DTDLPD Trigger: GTCCGGAAGATCAGTATCCAAATAAACAGAGGAATC...GGAGAACATGGATGAGAGCATATGAAGACTCACAGAGGAAACACAGACATGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
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| CDS-3UTR CAA 90 bp | CAAGTGGACAACTTTGACTGCAAACAGATAAAGGAGTCTGATTGTGGTGCTCACAGATCTGAATGGATATaGATGTTGAAATGCCTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: QVDNFDCKQIKESDCGAHRSEWI*MLKCLL Trigger: TAGGAGGCATTTCAACATCAATATCCATTCAGATCT...GTGAGCACCACAATCAGACTCCTTTATCTGTTTGCAGTCAAAGTTGTCCACTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS TCA 90 bp | AAATGTGGAAACCAGAAGAATCCTATTCCTGGATCCTTCCATGGATaGGGAGCTTGGAGTATAACTTTATCAAATGAATCTCCTTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: KCGNQKNPIPGSFHG*GAWSITLSNESPST Trigger: AGTGGAAGGAGATTCATTTGATAAAGTTATACTCCAAGCTCCTCATCCATGGAAGGATCCAGGAATAGGATTCTTCTGGTTTCCACATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233622.2 |
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| CDS-3UTR CAA 90 bp | ATACATGATTCTATGATTCTCTATGGTCTGTTGCATCCTTGGCCCTATACCTCTAACAAAATCTGCATCTaGATAGTAGCCAGAAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: IHDSMILYGLLHPWPYTSNKICI*IVARRS Trigger: GCTTCTTCTGGCTACTATCAAGATGCAGATTTTGTT...AGAGGTATAGGGCCAAGGATGCAACAGACCATAGAGAATCATAGAATCATGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS-3UTR CAA 90 bp | AATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAAAATACAATCCCAAATGCTCAGGCTGCCATTaGGCTCACATTGACTTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: NEGLCQDSRNDNGKYNPKCSGCH*AHIDLD Trigger: ATCTAAGTCAATGTGAGCCAAATGGCAGCCTGAGCA...TTTGGGATTGTATTTTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS-3UTR CAA 90 bp | TTCTCCATGCCCACATTTACCATCATTCACATTCCCTCATTGAGAATAGATTTCATTGCTGAAACTTCCTaGTTCACACTGTACTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FSMPTFTIIHIPSLRIDFIAETS*FTLYSS Trigger: TGAGGAGTACAGTGTGAACAAGGAAGTTTCAGCAAT...GAAATCTATTCTCAATGAGGGAATGTGAATGATGGTAAATGTGGGCATGGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
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| CDS-3UTR CAA 90 bp | TTCTCCATGCCCACATTTACCATCATTCACATTCCCTCATTGAGAATAGATTTCGAATGGATATTGATGTaGAAATGCCTCCTATCACTG | + |
|
Preference number: 5 (lower is better) Translates to: FSMPTFTIIHIPSLRIDFEWILM*KCLLSL Trigger: CAGTGATAGGAGGCATTTCAACATCAATATCCATTC...GAAATCTATTCTCAATGAGGGAATGTGAATGATGGTAAATGTGGGCATGGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS GCA 90 bp | GTTTACTGTGTTCTTACTAGAATATTCTGTAACCTTTTCTGCAAATaGAACACAAATTCCATGGCTGATCATCTCCTCGGTAATATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VYCVLTRIFCNLFCK*NTNSMADHLLGNIP Trigger: AGGGATATTACCGAGGAGATGATCAGCCATGGAATTTGTGTTGCATTTGCAGAAAAGGTTACAGAATATTCTAGTAAGAACACAGTAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS-3UTR CAA 90 bp | TCATTGAGAATAGATTTCAATGGGTGTAAATCATGTCAGCTTTCACTCTGGGAAAACAAAATCTGCATCTaGATAGTAGCCAGAAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLRIDFNGCKSCQLSLWENKICI*IVARRS Trigger: GCTTCTTCTGGCTACTATCAAGATGCAGATTTTGTT...TTCCCAGAGTGAAAGCTGACATGATTTACACCCATTGAAATCTATTCTCAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS-3UTR CAA 90 bp | TCATTGAGAATAGATTTCAATGGGTGTAAATCATGTCAGCTTTCACTCTGGGAATCAATGAAGTTGACATaGAAGAGAAAGAATCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLRIDFNGCKSCQLSLWESMKLT*KRKNPR Trigger: CCTGGGATTCTTTCTCTTCAATGTCAACTTCATTGA...TTCCCAGAGTGAAAGCTGACATGATTTACACCCATTGAAATCTATTCTCAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS-3UTR CAA 90 bp | TTCTCCATGCCCACATTTACCATCATTCACATTCCCTCATTGAGAATAGATTTCAGGGTATTTTCTAGGTaGAACACTTCTGAGAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: FSMPTFTIIHIPSLRIDFRVFSR*NTSEKI Trigger: GATTTTCTCAGAAGTGTTCAACCTAGAAAATACCCT...GAAATCTATTCTCAATGAGGGAATGTGAATGATGGTAAATGTGGGCATGGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS-3UTR CAA 90 bp | TTCTCCATGCCCACATTTACCATCATTCACATTCCCTCATTGAGAATAGATTTCGCATATCTGTTTTATTaGCAATTTCTCCATCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FSMPTFTIIHIPSLRIDFAYLFY*QFLHLD Trigger: GTCCAGATGGAGAAATTGCAAATAAAACAGATATGC...GAAATCTATTCTCAATGAGGGAATGTGAATGATGGTAAATGTGGGCATGGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
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| CDS-3UTR CAA 90 bp | AATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAAAATACAATCCCAAAAGATCTGAATGGATATaGATGTTGAAATGCCTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: NEGLCQDSRNDNGKYNPKRSEWI*MLKCLL Trigger: TAGGAGGCATTTCAACATCAATATCCATTCAGATCT...TTTGGGATTGTATTTTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS CCA 72 bp | AATGAATCTCCTTCCACTCTGAGTGACAGCTCCTCATaGAGTGCCTGGGCAATGGCATACACAGCAGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: NESPSTLSDSSS*SAWAMAYTAAW Trigger: CCATGCTGCTGTGTATGCCATTGCCCAGGCACTCCATGAGGAGCTGTCACTCAGAGTGGAAGGAGATTCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS CAA 72 bp | CCCAAGCATGCAGAGGTCGTGTGCTCAGGCTGCCATTaGGCTCACATTGACTTAGATCCCAGAGTCTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PKHAEVVCSGCH*AHIDLDPRVCV Trigger: AACACAGACTCTGGGATCTAAGTCAATGTGAGCCAAATGGCAGCCTGAGCACACGACCTCTGCATGCTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS TCA 72 bp | GGCATACACAGCAGCATGGACTTTGTAGCTCATAGGTaGAGTATTCATATCCCAAGCATGCAGAGGTCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GIHSSMDFVAHR*SIHIPSMQRSC Trigger: ACACGACCTCTGCATGCTTGGGATATGAATACTTCACCTATGAGCTACAAAGTCCATGCTGCTGTGTATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS GCA 72 bp | GTGAAGTATTCATATCCCAAGCATGCAGAGGTCGTGTaGTCAGGCTGCCATTTGGCTCACATTGACTTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: VKYSYPKHAEVV*SGCHLAHIDLD Trigger: ATCTAAGTCAATGTGAGCCAAATGGCAGCCTGAGCACACGACCTCTGCATGCTTGGGATATGAATACTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS CCA 72 bp | CCCAGGCAAATGTGGAAACCAGAAGAATCCTATTCCTaGATCCTTCCATGGATGAGGAGCTTGGAGTATAAC | + |
|
Preference number: 6 (lower is better) Translates to: PRQMWKPEESYS*ILPWMRSLEYN Trigger: GTTATACTCCAAGCTCCTCATCCATGGAAGGATCCAGGAATAGGATTCTTCTGGTTTCCACATTTGCCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233622.2 |
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| CDS CAA 90 bp | ATAACATCAGTTGGACAATTCCCTGATACAGAGCTGCGGTGTGCATaGAAAACTGATAAGGAGACTGAAGCTGGACTCTGGTCCCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: ITSVGQFPDTELRCA*KTDKETEAGLWSQE Trigger: TTCTTGGGACCAGAGTCCAGCTTCAGTCTCCTTATCAGTTTTCAATGCACACCGCAGCTCTGTATCAGGGAATTGTCCAACTGATGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS TCA 72 bp | TATCATCTGGAACCACCAGGCCAACCCAGATCCAAGTaGAGTATAACATCAGTTGGACAATTCCCTGATACA | + |
|
Preference number: 6 (lower is better) Translates to: YHLEPPGQPRSK*SITSVGQFPDT Trigger: TGTATCAGGGAATTGTCCAACTGATGTTATACTTCACTTGGATCTGGGTTGGCCTGGTGGTTCCAGATGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS CAA 72 bp | GCCATAGAACCTTCCACAGCCTTCATCTCAATGAAGTaGACATTGAAGAGAAAGAATCCCAGGGACTTATTG | + |
|
Preference number: 6 (lower is better) Translates to: AIEPSTAFISMK*TLKRKNPRDLL Trigger: CAATAAGTCCCTGGGATTCTTTCTCTTCAATGTCAACTTCATTGAGATGAAGGCTGTGGAAGGTTCTATGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS CAA 72 bp | GACTTAGAACTCGGGAGATCTGAATGGATATTGATGTaGAAATGCCTCCTATCACTGCAACCAGCTTATCAG | + |
|
Preference number: 6 (lower is better) Translates to: DLELGRSEWILM*KCLLSLQPAYQ Trigger: CTGATAAGCTGGTTGCAGTGATAGGAGGCATTTCAACATCAATATCCATTCAGATCTCCCGAGTTCTAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS CAA 72 bp | TGTAGAGACTTAGAACTCGGGAGATCTGAATGGATATaGATGTTGAAATGCCTCCTATCACTGCAACCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CRDLELGRSEWI*MLKCLLSLQPA Trigger: AGCTGGTTGCAGTGATAGGAGGCATTTCAACATCAATATCCATTCAGATCTCCCGAGTTCTAAGTCTCTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS TCA 72 bp | TGGCCCTTTTGTAGGAATGGATGGAGCTTCCATGGATaGGGAGCTTGGAGTATAACTTTATCAAATGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: WPFCRNGWSFHG*GAWSITLSNES Trigger: AGATTCATTTGATAAAGTTATACTCCAAGCTCCTCATCCATGGAAGCTCCATCCATTCCTACAAAAGGGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162046.3 |
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| CDS CCA 72 bp | GGACTTTGTAGAGACTTAGAACTCGGGAGATCTGAATaGATATTGATGTTGAAATGCCTCCTATCACTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GLCRDLELGRSE*ILMLKCLLSLQ Trigger: TTGCAGTGATAGGAGGCATTTCAACATCAATATCCATTCAGATCTCCCGAGTTCTAAGTCTCTACAAAGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS CAA 90 bp | CTTTGTAGAGACTTAGAACTCGGGAGATCTGAATGGATATTGATGTaGAAATGCCTCCTATCACTGCAACCAGCTTATCAGTCTTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LCRDLELGRSEWILM*KCLLSLQPAYQSFQ Trigger: CTGAAAAGACTGATAAGCTGGTTGCAGTGATAGGAGGCATTTCAACATCAATATCCATTCAGATCTCCCGAGTTCTAAGTCTCTACAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS CAA 90 bp | GAGAGCAAAGCCATAGAACCTTCCACAGCCTTCATCTCAATGAAGTaGACATTGAAGAGAAAGAATCCCAGGGACTTATTGAATAGAATA | + |
|
Preference number: 6 (lower is better) Translates to: ESKAIEPSTAFISMK*TLKRKNPRDLLNRI Trigger: TATTCTATTCAATAAGTCCCTGGGATTCTTTCTCTTCAATGTCAACTTCATTGAGATGAAGGCTGTGGAAGGTTCTATGGCTTTGCTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS CAA 90 bp | AAAGCCATAGAACCTTCCACAGCCTTCATCTCAATGAAGTTGACATaGAAGAGAAAGAATCCCAGGGACTTATTGAATAGAATATTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: KAIEPSTAFISMKLT*KRKNPRDLLNRIFG Trigger: CCCAAATATTCTATTCAATAAGTCCCTGGGATTCTTTCTCTTCAATGTCAACTTCATTGAGATGAAGGCTGTGGAAGGTTCTATGGCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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| CDS GCA 72 bp | GTTCTTACTAGAATATTCTGTAACCTTTTCTGCAAATaGAACACAAATTCCATGGCTGATCATCTCCTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: VLTRIFCNLFCK*NTNSMADHLLG Trigger: ACCGAGGAGATGATCAGCCATGGAATTTGTGTTGCATTTGCAGAAAAGGTTACAGAATATTCTAGTAAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162046.3 ENSMUST00000233160.2 ENSMUST00000233622.2 |
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