RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN2R24 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000072780

Ensembl transcript IDs: ENSMUST00000075095.7, ENSMUST00000232985.2, ENSMUST00000233759.2

Found 477 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAGAGAGTGCAGCGGGGCCTCTCACAGCCTTGGCCCACGCTGGGTaGGCCCAAGGGGCCCAGGAGCAGCCTTGGTCCCTACCCTGCGGA +
Preference number: 1 (lower is better)
Translates to: TESAAGPLTALAHAG*AQGAQEQPWSLPCG
Trigger: TCCGCAGGGTAGGGACCAAGGCTGCTCCTGGGCCCCTTGGGCTCACCCAGCGTGGGCCAAGGCTGTGAGAGGCCCCGCTGCACTCTCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 90 bp TCCAACAGAGAGTGCAGCGGGGCCTCTCACAGCCTTGGCCCACGCTaGGTGAGCCCAAGGGGCCCAGGAGCAGCCTTGGTCCCTACCCTG +
Preference number: 1 (lower is better)
Translates to: SNRECSGASHSLGPR*VSPRGPGAALVPTL
Trigger: CAGGGTAGGGACCAAGGCTGCTCCTGGGCCCCTTGGGCTCACCCAGCGTGGGCCAAGGCTGTGAGAGGCCCCGCTGCACTCTCTGTTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 90 bp TGTGCAGGGTTCCAACAGAGAGTGCAGCGGGGCCTCTCACAGCCTTaGCCCACGCTGGGTGAGCCCAAGGGGCCCAGGAGCAGCCTTGGT +
Preference number: 1 (lower is better)
Translates to: CAGFQQRVQRGLSQP*PTLGEPKGPRSSLG
Trigger: ACCAAGGCTGCTCCTGGGCCCCTTGGGCTCACCCAGCGTGGGCCAAGGCTGTGAGAGGCCCCGCTGCACTCTCTGTTGGAACCCTGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 90 bp CCTGTTGTCCTCGCCCAGACGGCACAGGCAGCCCTGGGAGCTTGGTaGACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAG +
Preference number: 1 (lower is better)
Translates to: PVVLAQTAQAALGAW*TVPAAGALTTPLTK
Trigger: CTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCAAGCTCCCAGGGCTGCCTGTGCCGTCTGGGCGAGGACAACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 90 bp CCACAAAAGAGAGCCTATCTTGGCGGTGATCCTTGCAGTCCTTCTTaGCCTGGGTGCTGCTGGGACCGGGACCAGAATTGCAGCCCTTGT +
Preference number: 1 (lower is better)
Translates to: PQKRAYLGGDPCSPS*PGCCWDRDQNCSPC
Trigger: ACAAGGGCTGCAATTCTGGTCCCGGTCCCAGCAGCACCCAGGCCAAGAAGGACTGCAAGGATCACCGCCAAGATAGGCTCTCTTTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 90 bp CGACCACCCTCTGGACAACGGATTCAAGAGGTACTGTGCAGACAGTaGGACAGTTCCCCACCACTTCGCTCGAGTGTGACGGACGTTGAG +
Preference number: 1 (lower is better)
Translates to: RPPSGQRIQEVLCRQ*DSSPPLRSSVTDVE
Trigger: CTCAACGTCCGTCACACTCGAGCGAAGTGGTGGGGAACTGTCTCACTGTCTGCACAGTACCTCTTGAATCCGTTGTCCAGAGGGTGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 90 bp CAGCCATCAATTGGAGGTGAGGCCCTTGGTCTTGTGAAGATAATATaGCCCAGTACAGGGGAATGCCAGGGCCAGGAAGCAGGAGTAGGT +
Preference number: 1 (lower is better)
Translates to: QPSIGGEALGLVKII*PSTGECQGQEAGVG
Trigger: ACCTACTCCTGCTTCCTGGCCCTGGCATTCCCCTGTACTGGGGCATATTATCTTCACAAGACCAAGGGCCTCACCTCCAATTGATGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 90 bp GAACAACCACAGATTGTTCCAGCCCTACGTCAGCACCGGAAGTCCTaGCCTCAATATGTACCCTGTTACCGCCAAGTTCTTGCTTCCCAG +
Preference number: 1 (lower is better)
Translates to: EQPQIVPALRQHRKS*PQYVPCYRQVLASQ
Trigger: CTGGGAAGCAAGAACTTGGCGGTAACAGGGTACATATTGAGGTCAGGACTTCCGGTGCTGACGTAGGGCTGGAACAATCTGTGGTTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 90 bp CTTTCAGATGCTAGGCAGCTTCCTTTCGAGTCAGTTCAGCTTCTCTaGGATAGGAAGTTGTGTGTTGGGTCCAGGCATGCTTCCACGGTG +
Preference number: 1 (lower is better)
Translates to: LSDARQLPFESVQLL*DRKLCVGSRHASTV
Trigger: CACCGTGGAAGCATGCCTGGACCCAACACACAACTTCCTATCCCAGAGAAGCTGAACTGACTCGAAAGGAAGCTGCCTAGCATCTGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 90 bp ATACGGGATATGAGAATGCCAAGGTTCCAGGAGATTGGGTTTCCTTaGAACTCTTTGCCTCCTGAGTGCTTCCAGGCCTCTTGGCCTGTC +
Preference number: 1 (lower is better)
Translates to: IRDMRMPRFQEIGFP*NSLPPECFQASWPV
Trigger: GACAGGCCAAGAGGCCTGGAAGCACTCAGGAGGCAAAGAGTTTCAAGGAAACCCAATCTCCTGGAACCTTGGCATTCTCATATCCCGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 90 bp GGGAAAGGTGGGTATGTTCCCAGCCAGACTGCACAGATGCACACTTaGATGATGGAACCACAGCAGACTATAACATTTGAGAGTCGCATC +
Preference number: 1 (lower is better)
Translates to: GKGGYVPSQTAQMHT*MMEPQQTITFESRI
Trigger: GATGCGACTCTCAAATGTTATAGTCTGCTGTGGTTCCATCATTCAAGTGTGCATCTGTGCAGTCTGGCTGGGAACATACCCACCTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
3UTR CCA 90 bp TCTGCTGTGGTTCCATCATTCAAGTGTGCATCTGTGCAGTCTGGCTaGGAACATATCCTCCTTTCCCTGATGTTGACATGCAGTCAGAGT +
Preference number: 1 (lower is better)
Translates to: SAVVPSFKCASVQSG*EHILLSLMLTCSQS
Trigger: ACTCTGACTGCATGTCAACATCAGGGAAAGGAGGATATGTTCCCAGCCAGACTGCACAGATGCACACTTGAATGATGGAACCACAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 90 bp TGCTGGGTTTCTGCAGTGTGTGGATTTCTTTCATACCCACTTACCTaGGCTCGAAGGGCAAAACCATGGTGGCCGTGGAAATTCTTTCAA +
Preference number: 1 (lower is better)
Translates to: CWVSAVCGFLSYPLT*ARRAKPWWPWKFFQ
Trigger: TTGAAAGAATTTCCACGGCCACCATGGTTTTGCCCTTCGAGCTCAGGTAAGTGGGTATGAAAGAAATCCACACACTGCAGAAACCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 90 bp AAGAGTGGACCCCTCATTACAACAGAGGATGATGTGACCAAATTCTaGGTGCATGTCAACATCAGGGAAAGGTGGGTATGTTCCCAGCCA +
Preference number: 1 (lower is better)
Translates to: KSGPLITTEDDVTKF*VHVNIRERWVCSQP
Trigger: TGGCTGGGAACATACCCACCTTTCCCTGATGTTGACATGCACTCAGAATTTGGTCACATCATCCTCTGTTGTAATGAGGGGTCCACTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
3UTR GCA 90 bp CAATATGTACCCTGTTACCGCCAAGTTCTTGCTTCCCAGCGTAACTaGCTAAAGAATTTGCAATTCTATTGCCCCACCCCTCCCACTGAT +
Preference number: 1 (lower is better)
Translates to: QYVPCYRQVLASQRN*LKNLQFYCPTPPTD
Trigger: ATCAGTGGGAGGGGTGGGGCAATAGAATTGCAAATTCTTTAGGCAGTTACGCTGGGAAGCAAGAACTTGGCGGTAACAGGGTACATATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 90 bp ATAGTCTGCTGTGGTTCCATCATTCAAGTGTGCATCTGTGCAGTCTaGCTGGGAACATATCCTCCTTTCCCTGATGTTGACATGCAGTCA +
Preference number: 1 (lower is better)
Translates to: IVCCGSIIQVCICAV*LGTYPPFPDVDMQS
Trigger: TGACTGCATGTCAACATCAGGGAAAGGAGGATATGTTCCCAGCCAGACTGCACAGATGCACACTTGAATGATGGAACCACAGCAGACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 90 bp GAGGCAAAAACAATCACATTCAGCATGCTGGGTTTCTGCAGTGTGTaGATTTCTTTCATACCCACTTACCTGAGCTCGAAGGGCAAAACC +
Preference number: 1 (lower is better)
Translates to: EAKTITFSMLGFCSV*ISFIPTYLSSKGKT
Trigger: GGTTTTGCCCTTCGAGCTCAGGTAAGTGGGTATGAAAGAAATCCACACACTGCAGAAACCCAGCATGCTGAATGTGATTGTTTTTGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 90 bp CTAGCCTCCAGTGCTGGCTTACTGGGATGTATATTTCTTCCCAAATaGTATGTGATCCTACTGAAGTCAGGTGGTCATTCAAGAAAGAAG +
Preference number: 1 (lower is better)
Translates to: LASSAGLLGCIFLPK*YVILLKSGGHSRKK
Trigger: CTTCTTTCTTGAATGACCACCTGACTTCAGTAGGATCACATAGCATTTGGGAAGAAATATACATCCCAGTAAGCCAGCACTGGAGGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 90 bp AGCTTCAATGAGGCAAAAACAATCACATTCAGCATGCTGGGTTTCTaGAGTGTGTGGATTTCTTTCATACCCACTTACCTGAGCTCGAAG +
Preference number: 1 (lower is better)
Translates to: SFNEAKTITFSMLGF*SVWISFIPTYLSSK
Trigger: CTTCGAGCTCAGGTAAGTGGGTATGAAAGAAATCCACACACTGCAGAAACCCAGCATGCTGAATGTGATTGTTTTTGCCTCATTGAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 90 bp TACCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTaGGAGGAATCACTGTTTAACCATGGTCAAAAACCTGCAGAAATG +
Preference number: 1 (lower is better)
Translates to: YQIMPRANSSWSLQH*EESLFNHGQKPAEM
Trigger: CATTTCTGCAGGTTTTTGACCATGGTTAAACAGTGATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 90 bp GTCAAGTGCAGAGTTTTGTGCTCTTCTCTATGCTCAGGGAGAACATaGATGAGAGCATATGAAGACTCACAGAGGAAACACAGACATGTT +
Preference number: 1 (lower is better)
Translates to: VKCRVLCSSLCSGRT*MRAYEDSQRKHRHV
Trigger: AACATGTCTGTGTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGAAGAGCACAAAACTCTGCACTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 90 bp AACATGATTACCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTaGAACATTGGGAGGAATCACTGTTTAACCATGGTCAAAAACCTG +
Preference number: 1 (lower is better)
Translates to: NMITRSCQGQTQVGA*NIGRNHCLTMVKNL
Trigger: CAGGTTTTTGACCATGGTTAAACAGTGATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGGTAATCATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 90 bp CAAAACCATGGTGGCCGTGGAAATTCTTTCAATTCTAGCCTCCAGTaGTGGCTTACTGGGATGTATATTTCTTCCCAAATGCTATGTGAT +
Preference number: 1 (lower is better)
Translates to: QNHGGRGNSFNSSLQ*WLTGMYISSQMLCD
Trigger: ATCACATAGCATTTGGGAAGAAATATACATCCCAGTAAGCCAGCACTGGAGGCTAGAATTGAAAGAATTTCCACGGCCACCATGGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 90 bp GTGTTGGGTCCAGGCATGCTTCCACGGTGGCCCTTGCCAGAGATTTaGAATAACACGTTTCAAGTAAATAAAAATAGGTATTCTTATCTT +
Preference number: 1 (lower is better)
Translates to: VLGPGMLPRWPLPEI*NNTFQVNKNRYSYL
Trigger: AAGATAAGAATACCTATTTTTATTTACTTGAAACGTGTTATTGCAAATCTCTGGCAAGGGCCACCGTGGAAGCATGCCTGGACCCAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 90 bp TCCATAAGAAATATTAGAATGACTGTGAGCATCCACTTCTGTATTTaGCAGAAACACAGGGCCCCTAATGAAGGAGCTAAGAAAGTATCC +
Preference number: 1 (lower is better)
Translates to: SIRNIRMTVSIHFCI*QKHRAPNEGAKKVS
Trigger: GGATACTTTCTTAGCTCCTTCATTAGGGGCCCTGTGTTTCTGGCAAATACAGAAGTGGATGCTCACAGTCATTCTAATATTTCTTATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 90 bp TTGGCTGCAAATAATAGAAAGAATCCTACTAGTAAGACAGCCTCCTaGACTGCTGATAAAATCTGTGGTAAAGGCAATTTCACTGCAGAC +
Preference number: 1 (lower is better)
Translates to: LAANNRKNPTSKTAS*TADKICGKGNFTAD
Trigger: GTCTGCAGTGAAATTGCCTTTACCACAGATTTTATCAGCAGTCCAGGAGGCTGTCTTACTAGTAGGATTCTTTCTATTATTTGCAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 90 bp TTCAGGAGCAGTTCCAACTGGATGGCAGGAATCTCACTTCCTGGTTaGAGCTTATCTGAAAGACTAAGTAACAGTTCATCAAATATATGT +
Preference number: 1 (lower is better)
Translates to: FRSSSNWMAGISLPG*SLSERLSNSSSNIC
Trigger: ACATATATTTGATGAACTGTTACTTAGTCTTTCAGATAAGCTCCAACCAGGAAGTGAGATTCCTGCCATCCAGTTGGAACTGCTCCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 90 bp ATCAGTATCCAAATAAACAGAGGAATCAGTGTCTCCCTAAAATTATaGTATTTTTGGCCCATGAAGATCCACTGGGAACTGTTCTTGTCT +
Preference number: 1 (lower is better)
Translates to: ISIQINRGISVSLKL*YFWPMKIHWELFLS
Trigger: AGACAAGAACAGTTCCCAGTGGATCTTCATGGGCCAAAAATACCATAATTTTAGGGAGACACTGATTCCTCTGTTTATTTGGATACTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 90 bp TTCCAAGTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTaGCAGAGGCTTAGCTATGTCAGAATACACTTTAAAGGCACTTAT +
Preference number: 1 (lower is better)
Translates to: FQVCWLQGFSRILEH*QRLSYVRIHFKGTY
Trigger: ATAAGTGCCTTTAAAGTGTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAACTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 90 bp CTACTGAATTCCAAGTTTGTTGGCTTCAAGGATTTTCTAGGATATTaGAACACTGGCAGAGGCTTAGCTATGTCAGAATACACTTTAAAG +
Preference number: 1 (lower is better)
Translates to: LLNSKFVGFKDFLGY*NTGRGLAMSEYTLK
Trigger: CTTTAAAGTGTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAACTTGGAATTCAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 90 bp TGGAAGATGATTAAACTGCAGAAGCCATTGTTTGGTGAAATGCATTaGCTACACCCTACTCCTTTGAATATTCCAACATGGTTCATTTTA +
Preference number: 1 (lower is better)
Translates to: WKMIKLQKPLFGEMH*LHPTPLNIPTWFIL
Trigger: TAAAATGAACCATGTTGGAATATTCAAAGGAGTAGGGTGTAGTCAATGCATTTCACCAAACAATGGCTTCTGCAGTTTAATCATCTTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 90 bp CTTGAGACAAATTATTTTTGGGATTGTATTTTCCATTGTCATTTCTaGTATCTTGGCAAAGACCTTCATTGTGGTTGTGGCTTTCAAAGC +
Preference number: 1 (lower is better)
Translates to: LETNYFWDCIFHCHF*YLGKDLHCGCGFQS
Trigger: GCTTTGAAAGCCACAACCACAATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAAAATACAATCCCAAAAATAATTTGTCTCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 90 bp TGTCCATGGCTGGTATGGAATGGTTCTGAAATACACCCTTTAACTTaGAATAAAGTAGGCAAAGATATTAATGCTTTGATAAAACAAGGA +
Preference number: 1 (lower is better)
Translates to: CPWLVWNGSEIHPLT*NKVGKDINALIKQG
Trigger: TCCTTGTTTTATCAAAGCATTAATATCTTTGCCTACTTTATTCCAAGTTAAAGGGTGTATTTCAGAACCATTCCATACCAGCCATGGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 90 bp AAATTATTTTTGGGATTGTATTTTCCATTGTCATTTCTGCTATCTTaGCAAAGACCTTCATTGTGGTTGTGGCTTTCAAAGCCATCAAAC +
Preference number: 1 (lower is better)
Translates to: KLFLGLYFPLSFLLS*QRPSLWLWLSKPSN
Trigger: GTTTGATGGCTTTGAAAGCCACAACCACAATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAAAATACAATCCCAAAAATAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp CCTTTGAGCCTTGTGAAAGCTAGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTGGCCTTCAGGGCTTGTaGGGCCTGAGGCGGCGGGTC +
Preference number: 2 (lower is better)
Translates to: PLSLVKASTRGFCSSRPSGLQGL*GLRRRV
Trigger: GACCCGCCGCCTCAGGCCGCACAAGCCCTGAAGGCC...AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp TGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTATAGGCCTTCAGGGCTTGTaGGGCCTGAGGCGGCGGGTC +
Preference number: 2 (lower is better)
Translates to: WCTVPAAGALTTPLTKIIGLQGL*GLRRRV
Trigger: GACCCGCCGCCTCAGGCCGCACAAGCCCTGAAGGCC...TATAATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp CCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATCGGCCTCTCACAGCCTTaGCCCACGCTGGGTGAGCCC +
Preference number: 2 (lower is better)
Translates to: PDHAKGKLKLELATLGGIGLSQP*PTLGEP
Trigger: GGGCTCACCCAGCGTGGGCCAAGGCTGTGAGAGGCC...GATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CAA 90 bp AGGCAGCTTCCTTTCGAGTCAGTTCAGCTTCTCTGGGATAGGAAGTaGTGTGTTGGGTCCAGGCATGCTTCCACGGTGGCCCTTGCCAGA +
Preference number: 2 (lower is better)
Translates to: RQLPFESVQLLWDRK*CVGSRHASTVALAR
Trigger: TCTGGCAAGGGCCACCGTGGAAGCATGCCTGGACCCAACACACAACTTCCTATCCCAGAGAAGCTGAACTGACTCGAAAGGAAGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp CTTGCAGTCCTTCTTGGCCTGGGTGCTGCTGGGACCGGGACCAGAATTGCAGCCCAACAGAGGATGATGTaGCCAAATTCTGAGTGCATG +
Preference number: 2 (lower is better)
Translates to: LAVLLGLGAAGTGTRIAAQQRMM*PNSECM
Trigger: CATGCACTCAGAATTTGGTCACATCATCCTCTGTTG...GGCTGCAATTCTGGTCCCGGTCCCAGCAGCACCCAGGCCAAGAAGGACTGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
3UTR-3UTR CCA 90 bp CCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATCCAGTCCTTCTTGGCCTaGGTGCTGCTGGGACCGGGA +
Preference number: 2 (lower is better)
Translates to: PDHAKGKLKLELATLGGIQSFLA*VLLGPG
Trigger: TCCCGGTCCCAGCAGCACCCAGGCCAAGAAGGACTG...GATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp CCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATCGCAGCCCTGGGAGCTTaGTGCACTGTCCCTGCTGCA +
Preference number: 2 (lower is better)
Translates to: PDHAKGKLKLELATLGGIAALGA*CTVPAA
Trigger: TGCAGCAGGGACAGTGCACCAAGCTCCCAGGGCTGC...GATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp AGTTCTCCAAAGGGAAGCCTCATTGTAAGCTTTGTGCTGAATTCTTTGCTCTGTGGCCTTCAGGGCTTGTaGGGCCTGAGGCGGCGGGTC +
Preference number: 2 (lower is better)
Translates to: SSPKGSLIVSFVLNSLLCGLQGL*GLRRRV
Trigger: GACCCGCCGCCTCAGGCCGCACAAGCCCTGAAGGCC...ACAGAGCAAAGAATTCAGCACAAAGCTTACAATGAGGCTTCCCTTTGGAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp CCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATCGGTTCCAACAGAGAGTaGAGCGGGGCCTCTCACAGC +
Preference number: 2 (lower is better)
Translates to: PDHAKGKLKLELATLGGIGSNRE*SGASHS
Trigger: GCTGTGAGAGGCCCCGCTGCACTCTCTGTTGGAACC...GATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp ACCCTATGGGTGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTGTGTCTATCGATGGCAAGGGATaGGTGGCCTGCCCATGGCCG +
Preference number: 2 (lower is better)
Translates to: TLWVEQQYELTSTPRAVSIDGKG*VACPWP
Trigger: CGGCCATGGGCAGGCCACCCATCCCTTGCCATCGAT...AGACACAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCCATAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp CTTGCAGTCCTTCTTGGCCTGGGTGCTGCTGGGACCGGGACCAGAATTGCAGCCTACACCCTACTCCTTTaGATATTCCAACATGGTTCA +
Preference number: 2 (lower is better)
Translates to: LAVLLGLGAAGTGTRIAAYTLLL*IFQHGS
Trigger: TGAACCATGTTGGAATATTCAAAGGAGTAGGGTGTA...GGCTGCAATTCTGGTCCCGGTCCCAGCAGCACCCAGGCCAAGAAGGACTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp CCTTTGAGCCTTGTGAAAGCTAGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTCAGCACCGGAAGTCCTaGCCTCAATATGTACCCTGT +
Preference number: 2 (lower is better)
Translates to: PLSLVKASTRGFCSSRPSQHRKS*PQYVPC
Trigger: ACAGGGTACATATTGAGGTCAGGACTTCCGGTGCTG...AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp CTTGCAGTCCTTCTTGGCCTGGGTGCTGCTGGGACCGGGACCAGAATTGCAGCCCATTGTTTGGTGAAATaGATTGACTACACCCTACTC +
Preference number: 2 (lower is better)
Translates to: LAVLLGLGAAGTGTRIAAHCLVK*IDYTLL
Trigger: GAGTAGGGTGTAGTCAATGCATTTCACCAAACAATG...GGCTGCAATTCTGGTCCCGGTCCCAGCAGCACCCAGGCCAAGAAGGACTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp GCCAATTCGGCATGTAGGGCTGCCCTGAGAGGTAAAATCAATAGTTTAGATATATGGGTGGCCTGCCCATaGCCGAGCACGCAGACCTGG +
Preference number: 2 (lower is better)
Translates to: ANSACRAALRGKINSLDIWVACP*PSTQTW
Trigger: CCAGGTCTGCGTGCTCGGCCATGGGCAGGCCACCCA...TATATCTAAACTATTGATTTTACCTCTCAGGGCAGCCCTACATGCCGAATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp CTTGCAGTCCTTCTTGGCCTGGGTGCTGCTGGGACCGGGACCAGAATTGCAGCCATTTTAATCTTGGTTTaGCAAGCTGCCTCTTACAAG +
Preference number: 2 (lower is better)
Translates to: LAVLLGLGAAGTGTRIAAILILV*QAASYK
Trigger: CTTGTAAGAGGCAGCTTGTCAAACCAAGATTAAAAT...GGCTGCAATTCTGGTCCCGGTCCCAGCAGCACCCAGGCCAAGAAGGACTGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ACCCTATGGGTGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTGTGTCTAGAGGGCAGAGAAGGTaGTCGCCTCCTAGCCCTTAC +
Preference number: 2 (lower is better)
Translates to: TLWVEQQYELTSTPRAVSRGQRR*SPPSPY
Trigger: GTAAGGGCTAGGAGGCGAGCACCTTCTCTGCCCTCT...AGACACAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCCATAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACAGCCTTGGCCCACGCTaGGTGAGCCCAAGGGGCCCA +
Preference number: 2 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYSLGPR*VSPRGP
Trigger: TGGGCCCCTTGGGCTCACCCAGCGTGGGCCAAGGCT...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACGCCCTGGGAGCTTGGTaGACTGTCCCTGCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYALGAW*TVPAAG
Trigger: CCCTGCAGCAGGGACAGTGCACCAAGCTCCCAGGGC...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp TGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTATATGTCAACCTGGCTATTaGGGCTGCCTTACAACTAAC +
Preference number: 2 (lower is better)
Translates to: WCTVPAAGALTTPLTKIICQPGY*GCLTTN
Trigger: GTTAGTTGTAAGGCAGCCCCAATAGCCAGGTTGACA...TATAATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp GCTTGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTTACACCCTACTCCTTTaGATATTCCAACATGGTTCA +
Preference number: 2 (lower is better)
Translates to: AWCTVPAAGALTTPLTKIYTLLL*IFQHGS
Trigger: TGAACCATGTTGGAATATTCAAAGGAGTAGGGTGTA...AATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp ACCCTATGGGTGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTGTGTCTGTACTGTGCAGACAGTaGGACAGTTCCCCACCACTT +
Preference number: 2 (lower is better)
Translates to: TLWVEQQYELTSTPRAVSVLCRQ*DSSPPL
Trigger: AAGTGGTGGGGAACTGTCTCACTGTCTGCACAGTAC...AGACACAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCCATAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGGGTTCCAACAGAGAGTaGAGCGGGGCCTCTCACAGC +
Preference number: 2 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVGSNRE*SGASHS
Trigger: GCTGTGAGAGGCCCCGCTGCACTCTCTGTTGGAACC...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp GTTTTAAACATGATTACCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCGTGCACTGTCCCTGCTaGAGGGGCACTAACTACGCC +
Preference number: 2 (lower is better)
Translates to: VLNMITRSCQGQTQVGACVHCPC*RGTNYA
Trigger: GGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCAC...GCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGGTAATCATGTTTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp CCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATCAAAAGTGGGCCACGATaGACTGCTCAGAGAACAACC +
Preference number: 2 (lower is better)
Translates to: PDHAKGKLKLELATLGGIKSGPR*TAQRTT
Trigger: GGTTGTTCTCTGAGCAGTGCATCGTGGCCCACTTTT...GATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp CCTTTGAGCCTTGTGAAAGCTAGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTAGCATGCTGGGTTTCTaGAGTGTGTGGATTTCTTTC +
Preference number: 2 (lower is better)
Translates to: PLSLVKASTRGFCSSRPSSMLGF*SVWISF
Trigger: GAAAGAAATCCACACACTGCAGAAACCCAGCATGCT...AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp CCTTTGAGCCTTGTGAAAGCTAGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTCAATCACATTCAGCATaGTGGGTTTCTGCAGTGTGT +
Preference number: 2 (lower is better)
Translates to: PLSLVKASTRGFCSSRPSQSHSA*WVSAVC
Trigger: ACACACTGCAGAAACCCAGCATGCTGAATGTGATTG...AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp GCTTGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTGCTTCTAAGATTAAGTaGATCTTAGGTGGAGCTCAT +
Preference number: 2 (lower is better)
Translates to: AWCTVPAAGALTTPLTKIASKIK*ILGGAH
Trigger: ATGAGCTCCACCTAAGATCCACTTAATCTTAGAAGC...AATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp TTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATTGTGGTTGTGGCTTTATCGATGGCAAGGGATaGGTGGCCTGCCCATGGCCG +
Preference number: 2 (lower is better)
Translates to: FHCHFCYLGKDLHCGCGFIDGKG*VACPWP
Trigger: CGGCCATGGGCAGGCCACCCATCCCTTGCCATCGAT...AAAGCCACAACCACAATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp CCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATCGCAGTTCCAACTGGATaGCAGGAATCTCACTTCCTG +
Preference number: 2 (lower is better)
Translates to: PDHAKGKLKLELATLGGIAVPTG*QESHFL
Trigger: CAGGAAGTGAGATTCCTGCCATCCAGTTGGAACTGC...GATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CAA 90 bp CATGAATCAGATGACTTACTGAAGTTTTGGGATCGAGGTGCCTCCTaGCCATCCCACCACAAAAGAGAGCCTATCTTGGCGGTGATCCTT +
Preference number: 2 (lower is better)
Translates to: HESDDLLKFWDRGAS*PSHHKREPILAVIL
Trigger: AAGGATCACCGCCAAGATAGGCTCTCTTTTGTGGTGGGATGGCAAGGAGGCACCTCGATCCCAAAACTTCAGTAAGTCATCTGATTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp TGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTATATTTGGTGAAATGCATTaGCTACACCCTACTCCTTTG +
Preference number: 2 (lower is better)
Translates to: WCTVPAAGALTTPLTKIIFGEMH*LHPTPL
Trigger: CAAAGGAGTAGGGTGTAGTCAATGCATTTCACCAAA...TATAATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp CCTTTGAGCCTTGTGAAAGCTAGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTGTTGTCTCAACAGAATaGGTGCCAATTACTATCTGC +
Preference number: 2 (lower is better)
Translates to: PLSLVKASTRGFCSSRPSVVSTE*VPITIC
Trigger: GCAGATAGTAATTGGCACGCATTCTGTTGAGACAAC...AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGGGCATGCTTCCACGGTaGCCCTTGCCAGAGATTTGC +
Preference number: 2 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVGMLPR*PLPEIC
Trigger: GCAAATCTCTGGCAAGGGCCACCGTGGAAGCATGCC...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp TGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTATATCAGTTCAGCTTCTCTaGGATAGGAAGTTGTGTGTT +
Preference number: 2 (lower is better)
Translates to: WCTVPAAGALTTPLTKIISVQLL*DRKLCV
Trigger: AACACACAACTTCCTATCCCAGAGAAGCTGAACTGA...TATAATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp ATCATGTATCCTAAACCATGTGGGCTTTCAGATATCTTCTCTTATATAGCTAAGTGGGTGGCCTGCCCATaGCCGAGCACGCAGACCTGG +
Preference number: 2 (lower is better)
Translates to: IMYPKPCGLSDIFSYIAKWVACP*PSTQTW
Trigger: CCAGGTCTGCGTGCTCGGCCATGGGCAGGCCACCCA...CTTAGCTATATAAGAGAAGATATCTGAAAGCCCACATGGTTTAGGATACATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp GCCAATTCGGCATGTAGGGCTGCCCTGAGAGGTAAAATCAATAGTTTAGATATACCTAAAGGCCAAAGCTaGGCCTTCAGGGCTTGTGCG +
Preference number: 2 (lower is better)
Translates to: ANSACRAALRGKINSLDIPKGQS*AFRACA
Trigger: CGCACAAGCCCTGAAGGCCCAGCTTTGGCCTTTAGG...TATATCTAAACTATTGATTTTACCTCTCAGGGCAGCCCTACATGCCGAATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCAGCCTTGGCCCACGCTaGGTGAGCCCAAGGGGCCCA +
Preference number: 2 (lower is better)
Translates to: LFICYRETPIVRANNRNLSLGPR*VSPRGP
Trigger: TGGGCCCCTTGGGCTCACCCAGCGTGGGCCAAGGCT...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp ATCATGTATCCTAAACCATGTGGGCTTTCAGATATCTTCTCTTATATAGCTAAGGGCCTCTCACAGCCTTaGCCCACGCTGGGTGAGCCC +
Preference number: 2 (lower is better)
Translates to: IMYPKPCGLSDIFSYIAKGLSQP*PTLGEP
Trigger: GGGCTCACCCAGCGTGGGCCAAGGCTGTGAGAGGCC...CTTAGCTATATAAGAGAAGATATCTGAAAGCCCACATGGTTTAGGATACATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTGCTTCCAGGCCTCTTaGCCTGTCAGGCAGGCTTTA +
Preference number: 2 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSCFQAS*PVRQAL
Trigger: TAAAGCCTGCCTGACAGGCCAAGAGGCCTGGAAGCA...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CAA 90 bp TGTTACCGCCAAGTTCTTGCTTCCCAGCGTAACTGCCTAAAGAATTaGCAATTCTATTGCCCCACCCCTCCCACTGATAAGTACCTGTAC +
Preference number: 2 (lower is better)
Translates to: CYRQVLASQRNCLKN*QFYCPTPPTDKYLY
Trigger: GTACAGGTACTTATCAGTGGGAGGGGTGGGGCAATAGAATTGCAAATTCTTTAGGCAGTTACGCTGGGAAGCAAGAACTTGGCGGTAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp CCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATCGTTTTGTTTTGTGGATaGGAGATGTCCATGGCTGGT +
Preference number: 2 (lower is better)
Translates to: PDHAKGKLKLELATLGGIVLFCG*EMSMAG
Trigger: ACCAGCCATGGACATCTCTCATCCACAAAACAAAAC...GATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp GGAGGTGAGGCCCTTGGTCTTGTGAAGATAATATGCCCCAGTACAGGGGAATGCCTGTACTTCCCCTTTTaGTTATGCAATTCTACTGTC +
Preference number: 2 (lower is better)
Translates to: GGEALGLVKIICPSTGECLYFPF*LCNSTV
Trigger: GACAGTAGAATTGCATAAGCAAAAGGGGAAGTACAG...GCATTCCCCTGTACTGGGGCATATTATCTTCACAAGACCAAGGGCCTCACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp CCTTTGAGCCTTGTGAAAGCTAGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTATGATTACCAGATCATaGCAAGGGCAAACTCAAGTT +
Preference number: 2 (lower is better)
Translates to: PLSLVKASTRGFCSSRPSMITRS*QGQTQV
Trigger: AACTTGAGTTTGCCCTTGGCATGATCTGGTAATCAT...AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp GGAGGTGAGGCCCTTGGTCTTGTGAAGATAATATGCCCCAGTACAGGGGAATGCGCTTCTAAGATTAAGTaGATCTTAGGTGGAGCTCAT +
Preference number: 2 (lower is better)
Translates to: GGEALGLVKIICPSTGECASKIK*ILGGAH
Trigger: ATGAGCTCCACCTAAGATCCACTTAATCTTAGAAGC...GCATTCCCCTGTACTGGGGCATATTATCTTCACAAGACCAAGGGCCTCACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp CCTTTGAGCCTTGTGAAAGCTAGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTAAGGTTCCAGGAGATTaGGTTTCCTTGAAACTCTTT +
Preference number: 2 (lower is better)
Translates to: PLSLVKASTRGFCSSRPSKVPGD*VSLKLF
Trigger: AAAGAGTTTCAAGGAAACCCAATCTCCTGGAACCTT...AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGAGCCTATCTTGGCGGTaGTCCTTGCAGTCCTTCTTG +
Preference number: 2 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVSLSWR*SLQSFL
Trigger: CAAGAAGGACTGCAAGGATCACCGCCAAGATAGGCT...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp CCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATCAATCAGATGACTTACTaGAGTTTTGGGATCGAGGTG +
Preference number: 2 (lower is better)
Translates to: PDHAKGKLKLELATLGGINQMTY*SFGIEV
Trigger: CACCTCGATCCCAAAACTTCAGTAAGTCATCTGATT...GATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp CCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATCCAGGAGAAGGCTACTTaGTACCCAATGAATGGAATA +
Preference number: 2 (lower is better)
Translates to: PDHAKGKLKLELATLGGIQEKAT*YPMNGI
Trigger: TATTCCATTCATTGGGTATCAAGTAGCCTTCTCCTG...GATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp AGTTCTCCAAAGGGAAGCCTCATTGTAAGCTTTGTGCTGAATTCTTTGCTCTGTCAGCACCGGAAGTCCTaGCCTCAATATGTACCCTGT +
Preference number: 2 (lower is better)
Translates to: SSPKGSLIVSFVLNSLLCQHRKS*PQYVPC
Trigger: ACAGGGTACATATTGAGGTCAGGACTTCCGGTGCTG...ACAGAGCAAAGAATTCAGCACAAAGCTTACAATGAGGCTTCCCTTTGGAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp CCTTTGAGCCTTGTGAAAGCTAGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTGAAATCTATTCTCAATaGGGGAATGTGAATGATGGT +
Preference number: 2 (lower is better)
Translates to: PLSLVKASTRGFCSSRPSEIYSQ*GNVNDG
Trigger: ACCATCATTCACATTCCCTCATTGAGAATAGATTTC...AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGAGAGGGCAGAGAAGGTaGTCGCCTCCTAGCCCTTAC +
Preference number: 2 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLRGQRR*SPPSPY
Trigger: GTAAGGGCTAGGAGGCGAGCACCTTCTCTGCCCTCT...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp ATCATGTATCCTAAACCATGTGGGCTTTCAGATATCTTCTCTTATATAGCTAAGCAGTCCTTCTTGGCCTaGGTGCTGCTGGGACCGGGA +
Preference number: 2 (lower is better)
Translates to: IMYPKPCGLSDIFSYIAKQSFLA*VLLGPG
Trigger: TCCCGGTCCCAGCAGCACCCAGGCCAAGAAGGACTG...CTTAGCTATATAAGAGAAGATATCTGAAAGCCCACATGGTTTAGGATACATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp ACCCTATGGGTGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTGTGTCTGGGTCTGCAACCCTATaGGTGGAACAACAATATGAA +
Preference number: 2 (lower is better)
Translates to: TLWVEQQYELTSTPRAVSGSATL*VEQQYE
Trigger: TTCATATTGTTGTTCCACCCATAGGGTTGCAGACCC...AGACACAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCCATAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp CCTTTGAGCCTTGTGAAAGCTAGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTAAATTATGGTATTTTTaGCCCATGAAGATCCACTGG +
Preference number: 2 (lower is better)
Translates to: PLSLVKASTRGFCSSRPSKLWYF*PMKIHW
Trigger: CCAGTGGATCTTCATGGGCCAAAAATACCATAATTT...AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp CCTTTGAGCCTTGTGAAAGCTAGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTGAATCACATAGCATTTaGGAAGAAACATACATCCCA +
Preference number: 2 (lower is better)
Translates to: PLSLVKASTRGFCSSRPSESHSI*EETYIP
Trigger: TGGGATGTATGTTTCTTCCCAAATGCTATGTGATTC...AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
3UTR-3UTR TCA 90 bp ACCCTATGGGTGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTGTGTCTTTTGGTGAAATGCATTaGCTACACCCTACTCCTTTG +
Preference number: 2 (lower is better)
Translates to: TLWVEQQYELTSTPRAVSFGEMH*LHPTPL
Trigger: CAAAGGAGTAGGGTGTAGTCAATGCATTTCACCAAA...AGACACAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCCATAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGTCCCATCCTTCCTGCTaGAAGGCACTTCCCCTTTTT +
Preference number: 2 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVSHPSC*KALPLF
Trigger: AAAAAGGGGAAGTGCCTTTCAGCAGGAAGGATGGGA...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp AGTTCTCCAAAGGGAAGCCTCATTGTAAGCTTTGTGCTGAATTCTTTGCTCTGTTCCCATCCTTCCTGCTaGAAGGCACTTCCCCTTTTT +
Preference number: 2 (lower is better)
Translates to: SSPKGSLIVSFVLNSLLCSHPSC*KALPLF
Trigger: AAAAAGGGGAAGTGCCTTTCAGCAGGAAGGATGGGA...ACAGAGCAAAGAATTCAGCACAAAGCTTACAATGAGGCTTCCCTTTGGAGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACAAACTCTTTGCCTCCTaGGTGCTTCCAGGCCTCTTG +
Preference number: 2 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYKLFAS*VLPGLL
Trigger: CAAGAGGCCTGGAAGCACTCAGGAGGCAAAGAGTTT...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ACCCTATGGGTGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTGTGTCTGTTGTCTCAACAGAATaGGTGCCAATTACTATCTGC +
Preference number: 2 (lower is better)
Translates to: TLWVEQQYELTSTPRAVSVVSTE*VPITIC
Trigger: GCAGATAGTAATTGGCACGCATTCTGTTGAGACAAC...AGACACAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCCATAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp GTTTTAAACATGATTACCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAAAAGTGGGCCACGATaGACTGCTCAGAGAACAACC +
Preference number: 2 (lower is better)
Translates to: VLNMITRSCQGQTQVGACKSGPR*TAQRTT
Trigger: GGTTGTTCTCTGAGCAGTGCATCGTGGCCCACTTTT...GCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGGTAATCATGTTTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTCCCTGATGTTGACATaGAGTCAGAGTTTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSSLMLT*SQSLGK
Trigger: CTTGCCCAAACTCTGACTGCATGTCAACATCAGGGA...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGTCTTTGCCTCCTGAGTaGTTCCAGGCCTCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLSLPPE*FQASWP
Trigger: AGGCCAAGAGGCCTGGAAGCACTCAGGAGGCAAAGA...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp AGTTCTCCAAAGGGAAGCCTCATTGTAAGCTTTGTGCTGAATTCTTTGCTCTGTAATAACTGGACCTGCTaGACAGGTCTAGTGGTGCCA +
Preference number: 2 (lower is better)
Translates to: SSPKGSLIVSFVLNSLLCNNWTC*TGLVVP
Trigger: TGGCACCACTAGACCTGTCCAGCAGGTCCAGTTATT...ACAGAGCAAAGAATTCAGCACAAAGCTTACAATGAGGCTTCCCTTTGGAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp GTTTTAAACATGATTACCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCGCAGTTCCAACTGGATaGCAGGAATCTCACTTCCTG +
Preference number: 2 (lower is better)
Translates to: VLNMITRSCQGQTQVGACAVPTG*QESHFL
Trigger: CAGGAAGTGAGATTCCTGCCATCCAGTTGGAACTGC...GCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGGTAATCATGTTTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGTTTCCACAGCCACCATaGTTTTGCCTGTGGAGCTCA +
Preference number: 2 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVFPQPP*FCLWSS
Trigger: TGAGCTCCACAGGCAAAACCATGGTGGCTGTGGAAA...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
3UTR-3UTR TCA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCGAAGCCATTGTTTGGTaGAATGCATTGACTACACCC +
Preference number: 2 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSEAIVW*NALTTP
Trigger: GGGTGTAGTCAATGCATTTCACCAAACAATGGCTTC...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCCTCAATGAGGGAATGTaGATGATGGTAAATGTGGGC +
Preference number: 2 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSLNEGM*MMVNVG
Trigger: GCCCACATTTACCATCATTCACATTCCCTCATTGAG...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGCAGGGAGAACATGGATaGGAGCATATGAAGACTCAC +
Preference number: 2 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVQGEHG*EHMKTH
Trigger: GTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTG...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGATCCACTTCTGTATTTaGCAGAAACACAGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVIHFCI*QKHRAP
Trigger: AGGGGCCCTGTGTTTCTGGCAAATACAGAAGTGGAT...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTTGTGCTCTTCTCTATaGTCAGGGAGAACATGGATG +
Preference number: 2 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSLCSSL*SGRTWM
Trigger: CATCCATGTTCTCCCTGAGCATAGAGAAGAGCACAA...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGTCCCTGATGTTGACATaGAGTCAGAGTTTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVSLMLT*SQSLGK
Trigger: CTTGCCCAAACTCTGACTGCATGTCAACATCAGGGA...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp ATCATGTATCCTAAACCATGTGGGCTTTCAGATATCTTCTCTTATATAGCTAAGGGCATGCTTCCACGGTaGCCCTTGCCAGAGATTTGC +
Preference number: 2 (lower is better)
Translates to: IMYPKPCGLSDIFSYIAKGMLPR*PLPEIC
Trigger: GCAAATCTCTGGCAAGGGCCACCGTGGAAGCATGCC...CTTAGCTATATAAGAGAAGATATCTGAAAGCCCACATGGTTTAGGATACATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCGGCATGCTTCCACGGTaGCCCTTGCCAGAGATTTGC +
Preference number: 2 (lower is better)
Translates to: LFICYRETPIVRANNRNLGMLPR*PLPEIC
Trigger: GCAAATCTCTGGCAAGGGCCACCGTGGAAGCATGCC...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp TTTGGCATGTTCCACAGGCCTTACACGGTACATTACTATACAAGATTTTATAAACCTAAAGGCCAAAGCTaGGCCTTCAGGGCTTGTGCG +
Preference number: 2 (lower is better)
Translates to: FGMFHRPYTVHYYTRFYKPKGQS*AFRACA
Trigger: CGCACAAGCCCTGAAGGCCCAGCTTTGGCCTTTAGG...TTTATAAAATCTTGTATAGTAATGTACCGTGTAAGGCCTGTGGAACATGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCCCTAAAGGCCAAAGCTaGGCCTTCAGGGCTTGTGCG +
Preference number: 2 (lower is better)
Translates to: LFICYRETPIVRANNRNLPKGQS*AFRACA
Trigger: CGCACAAGCCCTGAAGGCCCAGCTTTGGCCTTTAGG...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGTGTCAACCTGGCTATTaGGGCTGCCTTACAACTAAC +
Preference number: 2 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVCQPGY*GCLTTN
Trigger: GTTAGTTGTAAGGCAGCCCCAATAGCCAGGTTGACA...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCGGGTCTGCAACCCTATaGGTGGAACAACAATATGAA +
Preference number: 2 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSGSATL*VEQQYE
Trigger: TTCATATTGTTGTTCCACCCATAGGGTTGCAGACCC...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp TCATTGAAACTGTCAGGTAACCTTCTCACCAGAAAAGCAATAAGCAAGCTGAGAAACATCAGGGAAAGGTaGGTATGTTCCCAGCCAGAC +
Preference number: 2 (lower is better)
Translates to: SLKLSGNLLTRKAISKLRNIRER*VCSQPD
Trigger: GTCTGGCTGGGAACATACCCACCTTTCCCTGATGTT...TCTCAGCTTGCTTATTGCTTTTCTGGTGAGAAGGTTACCTGACAGTTTCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
3UTR CAA 90 bp CCAAATAAACAGAGGAATCAGTGTCTCCCTAAAATTATGGTATTTTaGGCCCATGAAGATCCACTGGGAACTGTTCTTGTCTCCTTGGCC +
Preference number: 2 (lower is better)
Translates to: PNKQRNQCLPKIMVF*AHEDPLGTVLVSLA
Trigger: GGCCAAGGAGACAAGAACAGTTCCCAGTGGATCTTCATGGGCCAAAAATACCATAATTTTAGGGAGACACTGATTCCTCTGTTTATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTGTGTTCAAAATGTCTaGAACTGTACACTCATGGGG +
Preference number: 2 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSCVQNV*NCTLMG
Trigger: CCCCATGAGTGTACAGTTTCAGACATTTTGAACACA...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACGAGATTGGGTTTCCTTaGAACTCTTTGCCTCCTGAG +
Preference number: 2 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYEIGFP*NSLPPE
Trigger: CTCAGGAGGCAAAGAGTTTCAAGGAAACCCAATCTC...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp GCCAATTCGGCATGTAGGGCTGCCCTGAGAGGTAAAATCAATAGTTTAGATATAGATGTGACCAAATTCTaGGTGCATGTCAACATCAGG +
Preference number: 2 (lower is better)
Translates to: ANSACRAALRGKINSLDIDVTKF*VHVNIR
Trigger: CCTGATGTTGACATGCACTCAGAATTTGGTCACATC...TATATCTAAACTATTGATTTTACCTCTCAGGGCAGCCCTACATGCCGAATTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
3UTR-3UTR GCA 90 bp ACCCTATGGGTGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTGTGTCTATTAGAAGTTTTGGATaGTTGCCAGAAGCTGTTAGA +
Preference number: 2 (lower is better)
Translates to: TLWVEQQYELTSTPRAVSIRSFG*LPEAVR
Trigger: TCTAACAGCTTCTGGCAAGCATCCAAAACTTCTAAT...AGACACAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCCATAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGACTCAAGTTGGAGCTTaGAACATTGGGAGGAATCAC +
Preference number: 2 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVTQVGA*NIGRNH
Trigger: GTGATTCCTCCCAATGTTGCAAGCTCCAACTTGAGT...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGAAGTGCAGAGTTTTGTaGTCTTCTCTATGCTCAGGG +
Preference number: 2 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVKCRVL*SSLCSG
Trigger: CCCTGAGCATAGAGAAGAGCACAAAACTCTGCACTT...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp TTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATTGTGGTTGTGGCTTTTCAAGTGTGCATCTGTaGAGTCTGGCTGGGAACATA +
Preference number: 2 (lower is better)
Translates to: FHCHFCYLGKDLHCGCGFSSVHL*SLAGNI
Trigger: TATGTTCCCAGCCAGACTGCACAGATGCACACTTGA...AAAGCCACAACCACAATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp TTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATTGTGGTTGTGGCTTTTGTCAACCTGGCTATTaGGGCTGCCTTACAACTAAC +
Preference number: 2 (lower is better)
Translates to: FHCHFCYLGKDLHCGCGFCQPGY*GCLTTN
Trigger: GTTAGTTGTAAGGCAGCCCCAATAGCCAGGTTGACA...AAAGCCACAACCACAATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGAATAACTGGACCTGCTaGACAGGTCTAGTGGTGCCA +
Preference number: 2 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLNNWTC*TGLVVP
Trigger: TGGCACCACTAGACCTGTCCAGCAGGTCCAGTTATT...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGCCTAGATGGTCTTACTaGTTCCTTGGTCTCCCTTTC +
Preference number: 2 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLPRWSY*FLGLPF
Trigger: GAAAGGGAGACCAAGGAATCAGTAAGACCATCTAGG...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp TGGCCCTTGCCAGAGATTTGCAATAACACGTTTCAAGTAAATAAAAATAGGTATAGCCTATCTTGGCGGTaGTCCTTGCAGTCCTTCTTG +
Preference number: 2 (lower is better)
Translates to: WPLPEICNNTFQVNKNRYSLSWR*SLQSFL
Trigger: CAAGAAGGACTGCAAGGATCACCGCCAAGATAGGCT...ATACCTATTTTTATTTACTTGAAACGTGTTATTGCAAATCTCTGGCAAGGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp GTTTTAAACATGATTACCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAATCAGATGACTTACTaGAGTTTTGGGATCGAGGTG +
Preference number: 2 (lower is better)
Translates to: VLNMITRSCQGQTQVGACNQMTY*SFGIEV
Trigger: CACCTCGATCCCAAAACTTCAGTAAGTCATCTGATT...GCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGGTAATCATGTTTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGCAGGAGAAGGCTACTTaGTACCCAATGAATGGAATA +
Preference number: 2 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVQEKAT*YPMNGI
Trigger: TATTCCATTCATTGGGTATCAAGTAGCCTTCTCCTG...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGAGCCAGTTTCTCTCTTaGAGCCTTGAACCATTATGT +
Preference number: 2 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVSQFLS*SLEPLC
Trigger: ACATAATGGTTCAAGGCTTCAAGAGAGAAACTGGCT...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACTCCCAGAGTGAAAGCTaGCATGATTTACACCCATTG +
Preference number: 2 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYSQSES*HDLHPL
Trigger: CAATGGGTGTAAATCATGTCAGCTTTCACTCTGGGA...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACAGCATGCTGGGTTTCTaGAGTGTGTGGATTTCTTTC +
Preference number: 2 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYSMLGF*SVWISF
Trigger: GAAAGAAATCCACACACTGCAGAAACCCAGCATGCT...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp TTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATTGTGGTTGTGGCTTTCAATCACATTCAGCATaGTGGGTTTCTGCAGTGTGT +
Preference number: 2 (lower is better)
Translates to: FHCHFCYLGKDLHCGCGFQSHSA*WVSAVC
Trigger: ACACACTGCAGAAACCCAGCATGCTGAATGTGATTG...AAAGCCACAACCACAATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGTCAAGTGTGCATCTGTaGAGTCTGGCTGGGAACATA +
Preference number: 2 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLSSVHL*SLAGNI
Trigger: TATGTTCCCAGCCAGACTGCACAGATGCACACTTGA...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCAGGGATAGAGGAAAATaGATTTTAGAACTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSRDRGK*ILELSQ
Trigger: CTGGGAGAGTTCTAAAATCCATTTTCCTCTATCCCT...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp GCCAATTCGGCATGTAGGGCTGCCCTGAGAGGTAAAATCAATAGTTTAGATATATCAGTTCAGCTTCTCTaGGATAGGAAGTTGTGTGTT +
Preference number: 2 (lower is better)
Translates to: ANSACRAALRGKINSLDISVQLL*DRKLCV
Trigger: AACACACAACTTCCTATCCCAGAGAAGCTGAACTGA...TATATCTAAACTATTGATTTTACCTCTCAGGGCAGCCCTACATGCCGAATTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp ATACATTTTTCCAAACAGTGGCATCTGCAACTTAATCACTTTTCCCTGTTATCCAATAACTGGACCTGCTaGACAGGTCTAGTGGTGCCA +
Preference number: 2 (lower is better)
Translates to: IHFSKQWHLQLNHFSLLSNNWTC*TGLVVP
Trigger: TGGCACCACTAGACCTGTCCAGCAGGTCCAGTTATT...GGATAACAGGGAAAAGTGATTAAGTTGCAGATGCCACTGTTTGGAAAAATGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGAGGAGCAGTTCCAACTaGATGGCAGGAATCTCACTT +
Preference number: 2 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLRSSSN*MAGISL
Trigger: AAGTGAGATTCCTGCCATCCAGTTGGAACTGCTCCT...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGTCACATTCAGCATGCTaGGTTTCTGCAGTGTGTGGA +
Preference number: 2 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLSHSAC*VSAVCG
Trigger: TCCACACACTGCAGAAACCCAGCATGCTGAATGTGA...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGCTGTTCTTGTCTCCTTaGCCATTAGTTTATCTGCCT +
Preference number: 2 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVLFLSP*PLVYLP
Trigger: AGGCAGATAAACTAATGGCCAAGGAGACAAGAACAG...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp GTTTTAAACATGATTACCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAATAGAAGGCAAGAGTaGACCCCTCATTACAACAGA +
Preference number: 2 (lower is better)
Translates to: VLNMITRSCQGQTQVGACNRRQE*TPHYNR
Trigger: TCTGTTGTAATGAGGGGTCCACTCTTGCCTTCTATT...GCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGGTAATCATGTTTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
3UTR CAA 90 bp GTATTTTTGGCCCATGAAGATCCACTGGGAACTGTTCTTGTCTCCTaGGCCATTAGTTTATCTGCCTTTTCAGCTATGATTCTAGGATTA +
Preference number: 2 (lower is better)
Translates to: VFLAHEDPLGTVLVS*AISLSAFSAMILGL
Trigger: TAATCCTAGAATCATAGCTGAAAAGGCAGATAAACTAATGGCCAAGGAGACAAGAACAGTTCCCAGTGGATCTTCATGGGCCAAAAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp ATACATTTTTCCAAACAGTGGCATCTGCAACTTAATCACTTTTCCCTGTTATCCCCTAGATGGTCTTACTaGTTCCTTGGTCTCCCTTTC +
Preference number: 2 (lower is better)
Translates to: IHFSKQWHLQLNHFSLLSPRWSY*FLGLPF
Trigger: GAAAGGGAGACCAAGGAATCAGTAAGACCATCTAGG...GGATAACAGGGAAAAGTGATTAAGTTGCAGATGCCACTGTTTGGAAAAATGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp AGTTCTCCAAAGGGAAGCCTCATTGTAAGCTTTGTGCTGAATTCTTTGCTCTGTTCTTCTTACCCCAAATaGTACCTTTTTGGCATGTTC +
Preference number: 2 (lower is better)
Translates to: SSPKGSLIVSFVLNSLLCSSYPK*YLFGMF
Trigger: GAACATGCCAAAAAGGTATCATTTGGGGTAAGAAGA...ACAGAGCAAAGAATTCAGCACAAAGCTTACAATGAGGCTTCCCTTTGGAGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACCAGACATGTTTATCCTaGGGATATCCAACACATCAG +
Preference number: 2 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYQTCLS*GYPTHQ
Trigger: CTGATGTGTTGGATATCCTCAGGATAAACATGTCTG...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ACTGGCAGAGGCTTAGCTATGTCAGAATACACTTTAAAGGCACTTATAATAAAAAAAAGTGGGCCACGATaGACTGCTCAGAGAACAACC +
Preference number: 2 (lower is better)
Translates to: TGRGLAMSEYTLKALIIKKSGPR*TAQRTT
Trigger: GGTTGTTCTCTGAGCAGTGCATCGTGGCCCACTTTT...TTTTATTATAAGTGCCTTTAAAGTGTATTCTGACATAGCTAAGCCTCTGCCAGT
41% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGAGCATGCTGGGTTTCTaGAGTGTGTGGATTTCTTTC +
Preference number: 2 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLSMLGF*SVWISF
Trigger: GAAAGAAATCCACACACTGCAGAAACCCAGCATGCT...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTTCCATTGTCATTTCTaGTATCTTGGCAAAGACCTT +
Preference number: 2 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSFHCHF*YLGKDL
Trigger: AAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAA...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCAGCTTGCTTCTAATATaGAATATAGCCTGCTATACC +
Preference number: 2 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSSLLLI*NIACYT
Trigger: GGTATAGCAGGCTATATTGCATATTAGAAGCAAGCT...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp GAGGCTATTAGCCAAGATATAGAGAATATAAAAAGGGGCCTAGATGGTCTTACTCTGTTTTATCCTCTCTaGCCCCTACAGGAGAAGTTT +
Preference number: 2 (lower is better)
Translates to: EAISQDIENIKRGLDGLTLFYPL*PLQEKF
Trigger: AAACTTCTCCTGTAGGGGCCAGAGAGGATAAAACAG...AGTAAGACCATCTAGGCCCCTTTTTATATTCTCTATATCTTGGCTAATAGCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCAATTGTTTTGTTTTGTaGATGAGAGATGTCCATGGC +
Preference number: 2 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSNCFVL*MRDVHG
Trigger: GCCATGGACATCTCTCATCCACAAAACAAAACAATT...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGGGGTCTGCAACCCTATaGGTGGAACAACAATATGAA +
Preference number: 2 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLGSATL*VEQQYE
Trigger: TTCATATTGTTGTTCCACCCATAGGGTTGCAGACCC...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACCCTTCATTGTGGTTGTaGCTTTCAAAGCCATCAAAC +
Preference number: 2 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYPSLWL*LSKPSN
Trigger: GTTTGATGGCTTTGAAAGCCACAACCACAATGAAGG...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGTCAGGCAGGCTTTACTaGAGTGTGAGTAGCAATGTA +
Preference number: 2 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLSGRLY*SVSSNV
Trigger: TACATTGCTACTCACACTCCAGTAAAGCCTGCCTGA...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CAA 90 bp CCGTTCACAGTATCTATATTAGAAGGTTTAGCAGGAGAAGGCTACTaGATACCCAATGAATGGAATAAAGTTGTTCAGTCTGTCCTCACT +
Preference number: 2 (lower is better)
Translates to: PFTVSILEGLAGEGY*IPNEWNKVVQSVLT
Trigger: AGTGAGGACAGACTGAACAACTTTATTCCATTCATTGGGTATCAAGTAGCCTTCTCCTGCTAAACCTTCTAATATAGATACTGTGAACGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACTACACCCTACTCCTTTaGATATTCCAACATGGTTCA +
Preference number: 2 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYYTLLL*IFQHGS
Trigger: TGAACCATGTTGGAATATTCAAAGGAGTAGGGTGTA...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp ATACATTTTTCCAAACAGTGGCATCTGCAACTTAATCACTTTTCCCTGTTATCCGTTTTGTTTTGTGGATaGGAGATGTCCATGGCTGGT +
Preference number: 2 (lower is better)
Translates to: IHFSKQWHLQLNHFSLLSVLFCG*EMSMAG
Trigger: ACCAGCCATGGACATCTCTCATCCACAAAACAAAAC...GGATAACAGGGAAAAGTGATTAAGTTGCAGATGCCACTGTTTGGAAAAATGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp ATACATTTTTCCAAACAGTGGCATCTGCAACTTAATCACTTTTCCCTGTTATCCGCCTGGCAAATACAGTaGAACCTTGATGTTACTCAG +
Preference number: 2 (lower is better)
Translates to: IHFSKQWHLQLNHFSLLSAWQIQ*NLDVTQ
Trigger: CTGAGTAACATCAAGGTTTCACTGTATTTGCCAGGC...GGATAACAGGGAAAAGTGATTAAGTTGCAGATGCCACTGTTTGGAAAAATGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCCAGGGAGAACATGGATaGGAGCATATGAAGACTCAC +
Preference number: 2 (lower is better)
Translates to: LFICYRETPIVRANNRNLQGEHG*EHMKTH
Trigger: GTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTG...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp TTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATTGTGGTTGTGGCTTTCATTGTTTGGTGAAATaGATTGACTACACCCTACTC +
Preference number: 2 (lower is better)
Translates to: FHCHFCYLGKDLHCGCGFHCLVK*IDYTLL
Trigger: GAGTAGGGTGTAGTCAATGCATTTCACCAAACAATG...AAAGCCACAACCACAATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp GCCAATTCGGCATGTAGGGCTGCCCTGAGAGGTAAAATCAATAGTTTAGATATAGAAGTTTTGGATGCTTaGCAGAAGCTGTTAGAAAAT +
Preference number: 2 (lower is better)
Translates to: ANSACRAALRGKINSLDIEVLDA*QKLLEN
Trigger: ATTTTCTAACAGCTTCTGGCAAGCATCCAAAACTTC...TATATCTAAACTATTGATTTTACCTCTCAGGGCAGCCCTACATGCCGAATTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp AAATCCTTGTTTTCTAGAGCCAGTTTCTCTCTTGAAGCCTTGAACCATTATGTTCTTGTGAAGATAATATaGCCCAGTACAGGGGAATGC +
Preference number: 2 (lower is better)
Translates to: KSLFSRASFSLEALNHYVLVKII*PSTGEC
Trigger: GCATTCCCCTGTACTGGGGCATATTATCTTCACAAG...AACATAATGGTTCAAGGCTTCAAGAGAGAAACTGGCTCTAGAAAACAAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ATCATGTATCCTAAACCATGTGGGCTTTCAGATATCTTCTCTTATATAGCTAAGATCCACTTCTGTATTTaGCAGAAACACAGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: IMYPKPCGLSDIFSYIAKIHFCI*QKHRAP
Trigger: AGGGGCCCTGTGTTTCTGGCAAATACAGAAGTGGAT...CTTAGCTATATAAGAGAAGATATCTGAAAGCCCACATGGTTTAGGATACATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ATACATTTTTCCAAACAGTGGCATCTGCAACTTAATCACTTTTCCCTGTTATCCACTCAAGTTGGAGCTTaGAACATTGGGAGGAATCAC +
Preference number: 2 (lower is better)
Translates to: IHFSKQWHLQLNHFSLLSTQVGA*NIGRNH
Trigger: GTGATTCCTCCCAATGTTGCAAGCTCCAACTTGAGT...GGATAACAGGGAAAAGTGATTAAGTTGCAGATGCCACTGTTTGGAAAAATGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACACTACAAGGATAGCCTaGAAGATGATTAAACTGCAG +
Preference number: 2 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYTTRIA*KMIKLQ
Trigger: CTGCAGTTTAATCATCTTCCAGGCTATCCTTGTAGT...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp AAATCCTTGTTTTCTAGAGCCAGTTTCTCTCTTGAAGCCTTGAACCATTATGTTCTGTTTTATCCTCTCTaGCCCCTACAGGAGAAGTTT +
Preference number: 2 (lower is better)
Translates to: KSLFSRASFSLEALNHYVLFYPL*PLQEKF
Trigger: AAACTTCTCCTGTAGGGGCCAGAGAGGATAAAACAG...AACATAATGGTTCAAGGCTTCAAGAGAGAAACTGGCTCTAGAAAACAAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGGGCCAATTTTTAACTTaGAAGTCAGAGTTCGTGGAC +
Preference number: 2 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLGQFLT*KSEFVD
Trigger: GTCCACGAACTCTGACTTCCAAGTTAAAAATTGGCC...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCCGAAGGGCAAAACCATaGTGGCCGTGGAAATTCTTT +
Preference number: 2 (lower is better)
Translates to: LFICYRETPIVRANNRNLRRAKP*WPWKFF
Trigger: AAAGAATTTCCACGGCCACCATGGTTTTGCCCTTCG...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CAA 90 bp CAATTTTTAACTTGGAAGTCAGAGTTCGTGGACAGAGGAGAAAATTaGGCTGCAAATAATAGAAAGAATCCTACTAGTAAGACAGCCTCC +
Preference number: 2 (lower is better)
Translates to: QFLTWKSEFVDRGEN*AANNRKNPTSKTAS
Trigger: GGAGGCTGTCTTACTAGTAGGATTCTTTCTATTATTTGCAGCCAAATTTTCTCCTCTGTCCACGAACTCTGACTTCCAAGTTAAAAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCGAAGCCATTGTTTGGTaGAATGCATTGACTACACCC +
Preference number: 2 (lower is better)
Translates to: LFICYRETPIVRANNRNLEAIVW*NALTTP
Trigger: GGGTGTAGTCAATGCATTTCACCAAACAATGGCTTC...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCCAGTGGATAGTCTCTTaGGAGAGCAAACATCCTTCA +
Preference number: 2 (lower is better)
Translates to: LFICYRETPIVRANNRNLQWIVS*ESKHPS
Trigger: TGAAGGATGTTTGCTCTCTCAAGAGACTATCCACTG...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGACATTTCTGATACTCTaGTTGTTCAAGTCCACTCAC +
Preference number: 2 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLTFLIL*LFKSTH
Trigger: GTGAGTGGACTTGAACAATCAGAGTATCAGAAATGT...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ACTGGCAGAGGCTTAGCTATGTCAGAATACACTTTAAAGGCACTTATAATAAAAAATTTGCAATTCTATTaGCCCACCCCTCCCACTGAT +
Preference number: 2 (lower is better)
Translates to: TGRGLAMSEYTLKALIIKNLQFY*PTPPTD
Trigger: ATCAGTGGGAGGGGTGGGGCAATAGAATTGCAAATT...TTTTATTATAAGTGCCTTTAAAGTGTATTCTGACATAGCTAAGCCTCTGCCAGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCCCATGGTCAAAAACCTaGAGAAATGGCTACAAAGCC +
Preference number: 2 (lower is better)
Translates to: LFICYRETPIVRANNRNLPWSKT*RNGYKA
Trigger: GGCTTTGTAGCCATTTCTGCAGGTTTTTGACCATGG...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGATATTTCTTCCCAAATaGTATGTGATCCTACTGAAG +
Preference number: 2 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVIFLPK*YVILLK
Trigger: CTTCAGTAGGATCACATAGCATTTGGGAAGAAATAT...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGCTAGGATTATTTATCTaGTATCGAGAAACACCCATT +
Preference number: 2 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVLGLFI*YRETPI
Trigger: AATGGGTGTTTCTCGATAGCAGATAAATAATCCTAG...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGACTACAAGGATAGCCTaGAAGATGATTAAACTGCAG +
Preference number: 2 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLTTRIA*KMIKLQ
Trigger: CTGCAGTTTAATCATCTTCCAGGCTATCCTTGTAGT...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp GAGGCTATTAGCCAAGATATAGAGAATATAAAAAGGGGCCTAGATGGTCTTACTAGGGATAGAGGAAAATaGATTTTAGAACTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: EAISQDIENIKRGLDGLTRDRGK*ILELSQ
Trigger: CTGGGAGAGTTCTAAAATCCATTTTCCTCTATCCCT...AGTAAGACCATCTAGGCCCCTTTTTATATTCTCTATATCTTGGCTAATAGCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACAAAAACCTGCAGAAATaGCTACAAAGCCAAAGTAGT +
Preference number: 2 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYKNLQK*LQSQSS
Trigger: ACTACTTTGGCTTTGTAGCCATTTCTGCAGGTTTTT...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp ACTGGCAGAGGCTTAGCTATGTCAGAATACACTTTAAAGGCACTTATAATAAAATGCCATAGTCTGCTGTaGTTCCATCATTCAAGTGTG +
Preference number: 2 (lower is better)
Translates to: TGRGLAMSEYTLKALIIKCHSLL*FHHSSV
Trigger: CACACTTGAATGATGGAACCACAGCAGACTATGGCA...TTTTATTATAAGTGCCTTTAAAGTGTATTCTGACATAGCTAAGCCTCTGCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACAAATTATGGTATTTTTaGCCCATGAAGATCCACTGG +
Preference number: 2 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYKLWYF*PMKIHW
Trigger: CCAGTGGATCTTCATGGGCCAAAAATACCATAATTT...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CAA 90 bp TCTACTGAATTCCAAGTTTGTTGGCTTCAAGGATTTTCTAGGATATaGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACACTTTAAA +
Preference number: 2 (lower is better)
Translates to: STEFQVCWLQGFSRI*EHWQRLSYVRIHFK
Trigger: TTTAAAGTGTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAACTTGGAATTCAGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp TTTGGCATGTTCCACAGGCCTTACACGGTACATTACTATACAAGATTTTATAAAAATCAGATGACTTACTaGAGTTTTGGGATCGAGGTG +
Preference number: 2 (lower is better)
Translates to: FGMFHRPYTVHYYTRFYKNQMTY*SFGIEV
Trigger: CACCTCGATCCCAAAACTTCAGTAAGTCATCTGATT...TTTATAAAATCTTGTATAGTAATGTACCGTGTAAGGCCTGTGGAACATGCCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCAGCCAGTTTCTCTCTTaGAGCCTTGAACCATTATGT +
Preference number: 2 (lower is better)
Translates to: LFICYRETPIVRANNRNLSQFLS*SLEPLC
Trigger: ACATAATGGTTCAAGGCTTCAAGAGAGAAACTGGCT...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp ATCATGTATCCTAAACCATGTGGGCTTTCAGATATCTTCTCTTATATAGCTAAGTGTGTTCAAAATGTCTaGAACTGTACACTCATGGGG +
Preference number: 2 (lower is better)
Translates to: IMYPKPCGLSDIFSYIAKCVQNV*NCTLMG
Trigger: CCCCATGAGTGTACAGTTTCAGACATTTTGAACACA...CTTAGCTATATAAGAGAAGATATCTGAAAGCCCACATGGTTTAGGATACATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCTTCTGTTATTTGCTCTaGCAATGGATGTGTCCCGAT +
Preference number: 2 (lower is better)
Translates to: LFICYRETPIVRANNRNLFCYLL*QWMCPD
Trigger: ATCGGGACACATCCATTGTCAGAGCAAATAACAGAA...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
3UTR-3UTR TCA 90 bp ATACATTTTTCCAAACAGTGGCATCTGCAACTTAATCACTTTTCCCTGTTATCCTTGTTTTTGCCTCATTaGAACTGTCAGGTAACCTTC +
Preference number: 2 (lower is better)
Translates to: IHFSKQWHLQLNHFSLLSLFLPH*NCQVTF
Trigger: GAAGGTTACCTGACAGTTTCAATGAGGCAAAAACAA...GGATAACAGGGAAAAGTGATTAAGTTGCAGATGCCACTGTTTGGAAAAATGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
3UTR-3UTR GCA 90 bp TTTGGCATGTTCCACAGGCCTTACACGGTACATTACTATACAAGATTTTATAAAGTTGTCTCAACAGAATaGGTGCCAATTACTATCTGC +
Preference number: 2 (lower is better)
Translates to: FGMFHRPYTVHYYTRFYKVVSTE*VPITIC
Trigger: GCAGATAGTAATTGGCACGCATTCTGTTGAGACAAC...TTTATAAAATCTTGTATAGTAATGTACCGTGTAAGGCCTGTGGAACATGCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ACTGGCAGAGGCTTAGCTATGTCAGAATACACTTTAAAGGCACTTATAATAAAATTCCCCTTTTGCTTATaGAATTCTACTGTCCCATCC +
Preference number: 2 (lower is better)
Translates to: TGRGLAMSEYTLKALIIKFPFCL*NSTVPS
Trigger: GGATGGGACAGTAGAATTGCATAAGCAAAAGGGGAA...TTTTATTATAAGTGCCTTTAAAGTGTATTCTGACATAGCTAAGCCTCTGCCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCTTCCCCTTTTGCTTATaGAATTCTACTGTCCCATCC +
Preference number: 2 (lower is better)
Translates to: LFICYRETPIVRANNRNLFPFCL*NSTVPS
Trigger: GGATGGGACAGTAGAATTGCATAAGCAAAAGGGGAA...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ATACATTTTTCCAAACAGTGGCATCTGCAACTTAATCACTTTTCCCTGTTATCCCTGTACTTCCCCTTTTaGTTATGCAATTCTACTGTC +
Preference number: 2 (lower is better)
Translates to: IHFSKQWHLQLNHFSLLSLYFPF*LCNSTV
Trigger: GACAGTAGAATTGCATAAGCAAAAGGGGAAGTACAG...GGATAACAGGGAAAAGTGATTAAGTTGCAGATGCCACTGTTTGGAAAAATGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ATACATTTTTCCAAACAGTGGCATCTGCAACTTAATCACTTTTCCCTGTTATCCATGATTACCAGATCATaGCAAGGGCAAACTCAAGTT +
Preference number: 2 (lower is better)
Translates to: IHFSKQWHLQLNHFSLLSMITRS*QGQTQV
Trigger: AACTTGAGTTTGCCCTTGGCATGATCTGGTAATCAT...GGATAACAGGGAAAAGTGATTAAGTTGCAGATGCCACTGTTTGGAAAAATGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp TTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATTGTGGTTGTGGCTTTATATTTCTTCCCAAATaGTATGTGATCCTACTGAAG +
Preference number: 2 (lower is better)
Translates to: FHCHFCYLGKDLHCGCGFIFLPK*YVILLK
Trigger: CTTCAGTAGGATCACATAGCATTTGGGAAGAAATAT...AAAGCCACAACCACAATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACAAGCTCTGTTTCTTTTaGTCACTAATATTCATTGGC +
Preference number: 2 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYKLCFF*SLIFIG
Trigger: GCCAATGAATATTAGTGAGCAAAAGAAACAGAGCTT...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp ATACATTTTTCCAAACAGTGGCATCTGCAACTTAATCACTTTTCCCTGTTATCCGCTTCTAAGATTAAGTaGATCTTAGGTGGAGCTCAT +
Preference number: 2 (lower is better)
Translates to: IHFSKQWHLQLNHFSLLSASKIK*ILGGAH
Trigger: ATGAGCTCCACCTAAGATCCACTTAATCTTAGAAGC...GGATAACAGGGAAAAGTGATTAAGTTGCAGATGCCACTGTTTGGAAAAATGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGAATTGTTTTGTTTTGTaGATGAGAGATGTCCATGGC +
Preference number: 2 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLNCFVL*MRDVHG
Trigger: GCCATGGACATCTCTCATCCACAAAACAAAACAATT...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp ATCATGTATCCTAAACCATGTGGGCTTTCAGATATCTTCTCTTATATAGCTAAGTCTTCTTACCCCAAATaGTACCTTTTTGGCATGTTC +
Preference number: 2 (lower is better)
Translates to: IMYPKPCGLSDIFSYIAKSSYPK*YLFGMF
Trigger: GAACATGCCAAAAAGGTATCATTTGGGGTAAGAAGA...CTTAGCTATATAAGAGAAGATATCTGAAAGCCCACATGGTTTAGGATACATGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp TGGCCCTTGCCAGAGATTTGCAATAACACGTTTCAAGTAAATAAAAATAGGTATCATTGTTTGGTGAAATaGATTGACTACACCCTACTC +
Preference number: 2 (lower is better)
Translates to: WPLPEICNNTFQVNKNRYHCLVK*IDYTLL
Trigger: GAGTAGGGTGTAGTCAATGCATTTCACCAAACAATG...ATACCTATTTTTATTTACTTGAAACGTGTTATTGCAAATCTCTGGCAAGGGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp AAATCCTTGTTTTCTAGAGCCAGTTTCTCTCTTGAAGCCTTGAACCATTATGTTATTAGAAGTTTTGGATaGTTGCCAGAAGCTGTTAGA +
Preference number: 2 (lower is better)
Translates to: KSLFSRASFSLEALNHYVIRSFG*LPEAVR
Trigger: TCTAACAGCTTCTGGCAAGCATCCAAAACTTCTAAT...AACATAATGGTTCAAGGCTTCAAGAGAGAAACTGGCTCTAGAAAACAAGGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ATACATTTTTCCAAACAGTGGCATCTGCAACTTAATCACTTTTCCCTGTTATCCATTAGAAGTTTTGGATaGTTGCCAGAAGCTGTTAGA +
Preference number: 2 (lower is better)
Translates to: IHFSKQWHLQLNHFSLLSIRSFG*LPEAVR
Trigger: TCTAACAGCTTCTGGCAAGCATCCAAAACTTCTAAT...GGATAACAGGGAAAAGTGATTAAGTTGCAGATGCCACTGTTTGGAAAAATGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ATCATGTATCCTAAACCATGTGGGCTTTCAGATATCTTCTCTTATATAGCTAAGCTGTACTTCCCCTTTTaGTTATGCAATTCTACTGTC +
Preference number: 2 (lower is better)
Translates to: IMYPKPCGLSDIFSYIAKLYFPF*LCNSTV
Trigger: GACAGTAGAATTGCATAAGCAAAAGGGGAAGTACAG...CTTAGCTATATAAGAGAAGATATCTGAAAGCCCACATGGTTTAGGATACATGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp AAATCCTTGTTTTCTAGAGCCAGTTTCTCTCTTGAAGCCTTGAACCATTATGTTGAATGTGATTGTTTTTaGCTCATTGAAACTGTCAGG +
Preference number: 2 (lower is better)
Translates to: KSLFSRASFSLEALNHYVECDCF*LIETVR
Trigger: CCTGACAGTTTCAATGAGGCAAAAACAATCACATTC...AACATAATGGTTCAAGGCTTCAAGAGAGAAACTGGCTCTAGAAAACAAGGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
3UTR-3UTR CCA 90 bp TGGCCCTTGCCAGAGATTTGCAATAACACGTTTCAAGTAAATAAAAATAGGTATACTACAAGGATAGCCTaGAAGATGATTAAACTGCAG +
Preference number: 2 (lower is better)
Translates to: WPLPEICNNTFQVNKNRYTTRIA*KMIKLQ
Trigger: CTGCAGTTTAATCATCTTCCAGGCTATCCTTGTAGT...ATACCTATTTTTATTTACTTGAAACGTGTTATTGCAAATCTCTGGCAAGGGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCAGGGATAGAGGAAAATaGATTTTAGAACTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: LFICYRETPIVRANNRNLRDRGK*ILELSQ
Trigger: CTGGGAGAGTTCTAAAATCCATTTTCCTCTATCCCT...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CCA 90 bp ATACATTTTTCCAAACAGTGGCATCTGCAACTTAATCACTTTTCCCTGTTATCCAATTGTTTTGTTTTGTaGATGAGAGATGTCCATGGC +
Preference number: 2 (lower is better)
Translates to: IHFSKQWHLQLNHFSLLSNCFVL*MRDVHG
Trigger: GCCATGGACATCTCTCATCCACAAAACAAAACAATT...GGATAACAGGGAAAAGTGATTAAGTTGCAGATGCCACTGTTTGGAAAAATGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CAA 90 bp CAAATTATTTTTGGGATTGTATTTTCCATTGTCATTTCTGCTATCTaGGCAAAGACCTTCATTGTGGTTGTGGCTTTCAAAGCCATCAAA +
Preference number: 2 (lower is better)
Translates to: QIIFGIVFSIVISAI*AKTFIVVVAFKAIK
Trigger: TTTGATGGCTTTGAAAGCCACAACCACAATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAAAATACAATCCCAAAAATAATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR TCA 90 bp ACTGGCAGAGGCTTAGCTATGTCAGAATACACTTTAAAGGCACTTATAATAAAAATTTTAATCTTGGTTTaGCAAGCTGCCTCTTACAAG +
Preference number: 2 (lower is better)
Translates to: TGRGLAMSEYTLKALIIKILILV*QAASYK
Trigger: CTTGTAAGAGGCAGCTTGTCAAACCAAGATTAAAAT...TTTTATTATAAGTGCCTTTAAAGTGTATTCTGACATAGCTAAGCCTCTGCCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ATCATGTATCCTAAACCATGTGGGCTTTCAGATATCTTCTCTTATATAGCTAAGGAAGTTTTGGATGCTTaGCAGAAGCTGTTAGAAAAT +
Preference number: 2 (lower is better)
Translates to: IMYPKPCGLSDIFSYIAKEVLDA*QKLLEN
Trigger: ATTTTCTAACAGCTTCTGGCAAGCATCCAAAACTTC...CTTAGCTATATAAGAGAAGATATCTGAAAGCCCACATGGTTTAGGATACATGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ACTGGCAGAGGCTTAGCTATGTCAGAATACACTTTAAAGGCACTTATAATAAAATTCCATTGTCATTTCTaGTATCTTGGCAAAGACCTT +
Preference number: 2 (lower is better)
Translates to: TGRGLAMSEYTLKALIIKFHCHF*YLGKDL
Trigger: AAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAA...TTTTATTATAAGTGCCTTTAAAGTGTATTCTGACATAGCTAAGCCTCTGCCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR GCA 90 bp ACTGGCAGAGGCTTAGCTATGTCAGAATACACTTTAAAGGCACTTATAATAAAAGAGATTTCTGTTATTTaGTCTGACAATGGATGTGTC +
Preference number: 2 (lower is better)
Translates to: TGRGLAMSEYTLKALIIKEISVI*SDNGCV
Trigger: GACACATCCATTGTCAGAGCAAATAACAGAAATCTC...TTTTATTATAAGTGCCTTTAAAGTGTATTCTGACATAGCTAAGCCTCTGCCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
3UTR GCA 72 bp GCCCAAGGGGCCCAGGAGCAGCCTTGGTCCCTACCCTaGGGACGCCAGGAGCCCTCGCCGTCGAGGCAGCCA +
Preference number: 3 (lower is better)
Translates to: AQGAQEQPWSLP*GRQEPSPSRQP
Trigger: TGGCTGCCTCGACGGCGAGGGCTCCTGGCGTCCGCAGGGTAGGGACCAAGGCTGCTCCTGGGCCCCTTGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 72 bp GCAGCGGGGCCTCTCACAGCCTTGGCCCACGCTGGGTaGGCCCAAGGGGCCCAGGAGCAGCCTTGGTCCCTA +
Preference number: 3 (lower is better)
Translates to: AAGPLTALAHAG*AQGAQEQPWSL
Trigger: TAGGGACCAAGGCTGCTCCTGGGCCCCTTGGGCTCACCCAGCGTGGGCCAAGGCTGTGAGAGGCCCCGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp CCCCTGTTGTCCTCGCCCAGACGGCACAGGCAGCCCTaGGAGCTTGGTGCACTGTCCCTGCTGCAGGGGCAC +
Preference number: 3 (lower is better)
Translates to: PLLSSPRRHRQP*ELGALSLLQGH
Trigger: GTGCCCCTGCAGCAGGGACAGTGCACCAAGCTCCCAGGGCTGCCTGTGCCGTCTGGGCGAGGACAACAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 72 bp CTCGCCCAGACGGCACAGGCAGCCCTGGGAGCTTGGTaGACTGTCCCTGCTGCAGGGGCACTAACTACGCCC +
Preference number: 3 (lower is better)
Translates to: LAQTAQAALGAW*TVPAAGALTTP
Trigger: GGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCAAGCTCCCAGGGCTGCCTGTGCCGTCTGGGCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp TTCCAACAGAGAGTGCAGCGGGGCCTCTCACAGCCTTaGCCCACGCTGGGTGAGCCCAAGGGGCCCAGGAGC +
Preference number: 3 (lower is better)
Translates to: FQQRVQRGLSQP*PTLGEPKGPRS
Trigger: GCTCCTGGGCCCCTTGGGCTCACCCAGCGTGGGCCAAGGCTGTGAGAGGCCCCGCTGCACTCTCTGTTGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp GTCCTCGCCCAGACGGCACAGGCAGCCCTGGGAGCTTaGTGCACTGTCCCTGCTGCAGGGGCACTAACTACG +
Preference number: 3 (lower is better)
Translates to: VLAQTAQAALGA*CTVPAAGALTT
Trigger: CGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCAAGCTCCCAGGGCTGCCTGTGCCGTCTGGGCGAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp TCTGCCATCGATGGCAAGGGATGGGTGGCCTGCCCATaGCCGAGCACGCAGACCTGGATGAACCTAGGCCTC +
Preference number: 3 (lower is better)
Translates to: SAIDGKGWVACP*PSTQTWMNLGL
Trigger: GAGGCCTAGGTTCATCCAGGTCTGCGTGCTCGGCCATGGGCAGGCCACCCATCCCTTGCCATCGATGGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 72 bp GGCCTTCAGGGCTTGTGCGGCCTGAGGCGGCGGGTCTaGGCAAAAACACTCTGCCATCGATGGCAAGGGATG +
Preference number: 3 (lower is better)
Translates to: GLQGLCGLRRRV*AKTLCHRWQGM
Trigger: CATCCCTTGCCATCGATGGCAGAGTGTTTTTGCTCAGACCCGCCGCCTCAGGCCGCACAAGCCCTGAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 72 bp GGCACAGGCAGCCCTGGGAGCTTGGTGCACTGTCCCTaGTGCAGGGGCACTAACTACGCCCCTAACCAAGAT +
Preference number: 3 (lower is better)
Translates to: GTGSPGSLVHCP*CRGTNYAPNQD
Trigger: ATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCAAGCTCCCAGGGCTGCCTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp TCTGAGCAAAAACACTCTGCCATCGATGGCAAGGGATaGGTGGCCTGCCCATGGCCGAGCACGCAGACCTGG +
Preference number: 3 (lower is better)
Translates to: SEQKHSAIDGKG*VACPWPSTQTW
Trigger: CCAGGTCTGCGTGCTCGGCCATGGGCAGGCCACCCATCCCTTGCCATCGATGGCAGAGTGTTTTTGCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp AGAGCCTATCTTGGCGGTGATCCTTGCAGTCCTTCTTaGCCTGGGTGCTGCTGGGACCGGGACCAGAATTGC +
Preference number: 3 (lower is better)
Translates to: RAYLGGDPCSPS*PGCCWDRDQNC
Trigger: GCAATTCTGGTCCCGGTCCCAGCAGCACCCAGGCCAAGAAGGACTGCAAGGATCACCGCCAAGATAGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp CCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATCGGCAGCCCTGGGAGCTaGGTGCACTGTCCCTGCTGC +
Preference number: 3 (lower is better)
Translates to: PDHAKGKLKLELATLGGIGSPGS*VHCPCC
Trigger: GCAGCAGGGACAGTGCACCAAGCTCCCAGGGCTGCC...GATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 72 bp ACAGGCAGCCCTGGGAGCTTGGTGCACTGTCCCTGCTaGAGGGGCACTAACTACGCCCCTAACCAAGATTAT +
Preference number: 3 (lower is better)
Translates to: TGSPGSLVHCPC*RGTNYAPNQDY
Trigger: ATAATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCAAGCTCCCAGGGCTGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp AAGGTCCCCTCGAGACCCTCGAATAACTGGACCTGCTaGACAGGTCTAGTGGTGCCAGATGTGGGGCACGAT +
Preference number: 3 (lower is better)
Translates to: KVPSRPSNNWTC*TGLVVPDVGHD
Trigger: ATCGTGCCCCACATCTGGCACCACTAGACCTGTCCAGCAGGTCCAGTTATTCGAGGGTCTCGAGGGGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 72 bp TGCCATCCCACCACAAAAGAGAGCCTATCTTGGCGGTaGTCCTTGCAGTCCTTCTTGGCCTGGGTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: CHPTTKESLSWR*SLQSFLAWVLL
Trigger: CAGCAGCACCCAGGCCAAGAAGGACTGCAAGGATCACCGCCAAGATAGGCTCTCTTTTGTGGTGGGATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 72 bp GGTCTTGTGAAGATAATATGCCCCAGTACAGGGGAATaGCAGGGCCAGGAAGCAGGAGTAGGTGGGTTGGGG +
Preference number: 3 (lower is better)
Translates to: GLVKIICPSTGE*QGQEAGVGGLG
Trigger: CCCCAACCCACCTACTCCTGCTTCCTGGCCCTGGCATTCCCCTGTACTGGGGCATATTATCTTCACAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp TGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTATAGGACCGGGACCAGAATaGCAGCCCTTGTGTTGTCTC +
Preference number: 3 (lower is better)
Translates to: WCTVPAAGALTTPLTKIIGPGPE*QPLCCL
Trigger: GAGACAACACAAGGGCTGCAATTCTGGTCCCGGTCC...TATAATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 72 bp GACAGTGAGACAGTTCCCCACCACTTCGCTCGAGTGTaGCGGACGTTGAGAGGTAAGCCTGGGCATTCAGTT +
Preference number: 3 (lower is better)
Translates to: DSETVPHHFARV*RTLRGKPGHSV
Trigger: AACTGAATGCCCAGGCTTACCTCTCAACGTCCGTCACACTCGAGCGAAGTGGTGGGGAACTGTCTCACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCGGCAGCCCTGGGAGCTaGGTGCACTGTCCCTGCTGC +
Preference number: 3 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSGSPGS*VHCPCC
Trigger: GCAGCAGGGACAGTGCACCAAGCTCCCAGGGCTGCC...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 72 bp TCTGGACAACGGATTCAAGAGGTACTGTGCAGACAGTaGGACAGTTCCCCACCACTTCGCTCGAGTGTGACG +
Preference number: 3 (lower is better)
Translates to: SGQRIQEVLCRQ*DSSPPLRSSVT
Trigger: CGTCACACTCGAGCGAAGTGGTGGGGAACTGTCTCACTGTCTGCACAGTACCTCTTGAATCCGTTGTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 72 bp CAAGGTTCCAGGAGATTGGGTTTCCTTGAAACTCTTTaGCTCCTGAGTGCTTCCAGGCCTCTTGGCCTGTCA +
Preference number: 3 (lower is better)
Translates to: QGSRRLGFLETL*LLSASRPLGLS
Trigger: TGACAGGCCAAGAGGCCTGGAAGCACTCAGGAGGCAAAGAGTTTCAAGGAAACCCAATCTCCTGGAACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp GCTAGGCAGCTTCCTTTCGAGTCAGTTCAGCTTCTCTaGGATAGGAAGTTGTGTGTTGGGTCCAGGCATGCT +
Preference number: 3 (lower is better)
Translates to: ARQLPFESVQLL*DRKLCVGSRHA
Trigger: AGCATGCCTGGACCCAACACACAACTTCCTATCCCAGAGAAGCTGAACTGACTCGAAAGGAAGCTGCCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp TGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTATAATAGGAAGTTGTGTGTaGGGTCCAGGCATGCTTCCA +
Preference number: 3 (lower is better)
Translates to: WCTVPAAGALTTPLTKIIIGSCV*GPGMLP
Trigger: TGGAAGCATGCCTGGACCCAACACACAACTTCCTAT...TATAATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ACCCTATGGGTGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTGTGTCTAGCCCCCATGGGAGATaGTGCAGGGTTCCAACAGAG +
Preference number: 3 (lower is better)
Translates to: TLWVEQQYELTSTPRAVSSPHGR*CRVPTE
Trigger: CTCTGTTGGAACCCTGCACAATCTCCCATGGGGGCT...AGACACAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCCATAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp TGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTATACAGTTTGTGACCAGATaGCAGGAAGCAGCTGAGAGA +
Preference number: 3 (lower is better)
Translates to: WCTVPAAGALTTPLTKIIQFVTR*QEAAER
Trigger: TCTCTCAGCTGCTTCCTGCAATCTGGTCACAAACTG...TATAATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp GCTTGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTAATCTGCTTCCTGGTTaGATGGCTTTGAAGGCTACA +
Preference number: 3 (lower is better)
Translates to: AWCTVPAAGALTTPLTKINLLPG*MALKAT
Trigger: TGTAGCCTTCAAAGCCATCAAACCAGGAAGCAGATT...AATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
3UTR-3UTR CAA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGGGCAGCCCTGGGAGCTaGGTGCACTGTCCCTGCTGC +
Preference number: 3 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLGSPGS*VHCPCC
Trigger: GCAGCAGGGACAGTGCACCAAGCTCCCAGGGCTGCC...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp CCTTTGAGCCTTGTGAAAGCTAGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTCTAGCCAGTCTCAGCTaGCTTATTGCTTTTCTGGCT +
Preference number: 3 (lower is better)
Translates to: PLSLVKASTRGFCSSRPSLASLS*LIAFLA
Trigger: AGCCAGAAAAGCAATAAGCAAGCTGAGACTGGCTAG...AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp GCTTGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTTCTATATTGTCTTCTTaGTTAGGCCCTTCAAAAGGG +
Preference number: 3 (lower is better)
Translates to: AWCTVPAAGALTTPLTKISILSS*LGPSKG
Trigger: CCCTTTTGAAGGGCCTAACAAAGAAGACAATATAGA...AATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp CCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATCCTCTACACAAGGTTCTaGTGTCTCTCTCTCTACCCC +
Preference number: 3 (lower is better)
Translates to: PDHAKGKLKLELATLGGILYTRF*CLSLYP
Trigger: GGGGTAGAGAGAGAGACACAAGAACCTTGTGTAGAG...GATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp TGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTATACCTGGTTTGATGGCTTaGAAGGCTACAACCACAATA +
Preference number: 3 (lower is better)
Translates to: WCTVPAAGALTTPLTKIIPGLMA*KATTTI
Trigger: TATTGTGGTTGTAGCCTTCAAAGCCATCAAACCAGG...TATAATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
3UTR TCA 72 bp TCTGCAGTGTGTGGATTTCTTTCATACCCACTTACCTaGGCTCGAAGGGCAAAACCATGGTGGCCGTGGAAA +
Preference number: 3 (lower is better)
Translates to: SAVCGFLSYPLT*ARRAKPWWPWK
Trigger: TTTCCACGGCCACCATGGTTTTGCCCTTCGAGCTCAGGTAAGTGGGTATGAAAGAAATCCACACACTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 72 bp CCCTGTTACCGCCAAGTTCTTGCTTCCCAGCGTAACTaGCTAAAGAATTTGCAATTCTATTGCCCCACCCCT +
Preference number: 3 (lower is better)
Translates to: PCYRQVLASQRN*LKNLQFYCPTP
Trigger: AGGGGTGGGGCAATAGAATTGCAAATTCTTTAGGCAGTTACGCTGGGAAGCAAGAACTTGGCGGTAACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 72 bp ATGGGGATGGTGACCCGACTCTCAAATGCCATAGTCTaGTGTGGTTCCATCATTCAAGTGTGCATCTGTGCA +
Preference number: 3 (lower is better)
Translates to: MGMVTRLSNAIV*CGSIIQVCICA
Trigger: TGCACAGATGCACACTTGAATGATGGAACCACAGCAGACTATGGCATTTGAGAGTCGGGTCACCATCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp GCCAATTCGGCATGTAGGGCTGCCCTGAGAGGTAAAATCAATAGTTTAGATATAGGACCGGGACCAGAATaGCAGCCCTTGTGTTGTCTC +
Preference number: 3 (lower is better)
Translates to: ANSACRAALRGKINSLDIGPGPE*QPLCCL
Trigger: GAGACAACACAAGGGCTGCAATTCTGGTCCCGGTCC...TATATCTAAACTATTGATTTTACCTCTCAGGGCAGCCCTACATGCCGAATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp AGTTCTCCAAAGGGAAGCCTCATTGTAAGCTTTGTGCTGAATTCTTTGCTCTGTGGACCGGGACCAGAATaGCAGCCCTTGTGTTGTCTC +
Preference number: 3 (lower is better)
Translates to: SSPKGSLIVSFVLNSLLCGPGPE*QPLCCL
Trigger: GAGACAACACAAGGGCTGCAATTCTGGTCCCGGTCC...ACAGAGCAAAGAATTCAGCACAAAGCTTACAATGAGGCTTCCCTTTGGAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp TTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATTGTGGTTGTGGCTTTTCCTTGCAGTCCTTCTaGGCCTGGGTGCTGCTGGGA +
Preference number: 3 (lower is better)
Translates to: FHCHFCYLGKDLHCGCGFSLQSF*AWVLLG
Trigger: TCCCAGCAGCACCCAGGCCAAGAAGGACTGCAAGGA...AAAGCCACAACCACAATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ACCCTATGGGTGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTGTGTCTGCAGCTGAGAGAATTTaGGGACCTGAGGAAAGTGAG +
Preference number: 3 (lower is better)
Translates to: TLWVEQQYELTSTPRAVSAAERI*GPEESE
Trigger: CTCACTTTCCTCAGGTCCCAAAATTCTCTCAGCTGC...AGACACAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCCATAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 72 bp AAAGGGGTCTGCAACCCTATGGGTGGAACAACAATATaGACTAACCAGTACCCCCAGAGCTGTGTCTCTAGT +
Preference number: 3 (lower is better)
Translates to: KGVCNPMGGTTI*TNQYPQSCVSS
Trigger: ACTAGAGACACAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCCATAGGGTTGCAGACCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 72 bp GGCCTCTTGGCCTGTCAGGCAGGCTTTACTGGAGTGTaGGTAGCAATGTACCTAACTCTCAATAATCTCAAC +
Preference number: 3 (lower is better)
Translates to: GLLACQAGFTGV*VAMYLTLNNLN
Trigger: GTTGAGATTATTGAGAGTTAGGTACATTGCTACTCACACTCCAGTAAAGCCTGCCTGACAGGCCAAGAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp GTTCCATCATTCAAGTGTGCATCTGTGCAGTCTGGCTaGGAACATATCCTCCTTTCCCTGATGTTGACATGC +
Preference number: 3 (lower is better)
Translates to: VPSFKCASVQSG*EHILLSLMLTC
Trigger: GCATGTCAACATCAGGGAAAGGAGGATATGTTCCCAGCCAGACTGCACAGATGCACACTTGAATGATGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp TGTGGTTCCATCATTCAAGTGTGCATCTGTGCAGTCTaGCTGGGAACATATCCTCCTTTCCCTGATGTTGAC +
Preference number: 3 (lower is better)
Translates to: CGSIIQVCICAV*LGTYPPFPDVD
Trigger: GTCAACATCAGGGAAAGGAGGATATGTTCCCAGCCAGACTGCACAGATGCACACTTGAATGATGGAACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp CCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATCTGCAGAAGCCATTGTTaGGTGAAATGCATTGACTAC +
Preference number: 3 (lower is better)
Translates to: PDHAKGKLKLELATLGGICRSHC*VKCIDY
Trigger: GTAGTCAATGCATTTCACCAAACAATGGCTTCTGCA...GATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp TGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTATAGATTTTAATCTTGGTTaGACAAGCTGCCTCTTACAA +
Preference number: 3 (lower is better)
Translates to: WCTVPAAGALTTPLTKIIDFNLG*TSCLLQ
Trigger: TTGTAAGAGGCAGCTTGTCAAACCAAGATTAAAATC...TATAATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp CCTTTGAGCCTTGTGAAAGCTAGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTCTCCCCAATCCTACATaGTGTCAAAAATTCATAGAT +
Preference number: 3 (lower is better)
Translates to: PLSLVKASTRGFCSSRPSLPNPT*CQKFID
Trigger: ATCTATGAATTTTTGACACAATGTAGGATTGGGGAG...AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGAGCCCCCATGGGAGATaGTGCAGGGTTCCAACAGAG +
Preference number: 3 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLSPHGR*CRVPTE
Trigger: CTCTGTTGGAACCCTGCACAATCTCCCATGGGGGCT...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp CCTTTGAGCCTTGTGAAAGCTAGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTGACAGAGGAGAAAATTaGGCTGCAAATAATAGAAAG +
Preference number: 3 (lower is better)
Translates to: PLSLVKASTRGFCSSRPSDRGEN*AANNRK
Trigger: CTTTCTATTATTTGCAGCCAAATTTTCTCCTCTGTC...AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp CCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATCAGGCCAATTTTTAACTaGGAAGTCAGAGTTCGTGGA +
Preference number: 3 (lower is better)
Translates to: PDHAKGKLKLELATLGGIRPIFN*EVRVRG
Trigger: TCCACGAACTCTGACTTCCAAGTTAAAAATTGGCCT...GATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp GGAGGTGAGGCCCTTGGTCTTGTGAAGATAATATGCCCCAGTACAGGGGAATGCGAAATATTAGAATTGTaGAATCTACCTGTGCCCCTT +
Preference number: 3 (lower is better)
Translates to: GGEALGLVKIICPSTGECEILEL*NLPVPL
Trigger: AAGGGGCACAGGTAGATTCAACAATTCTAATATTTC...GCATTCCCCTGTACTGGGGCATATTATCTTCACAAGACCAAGGGCCTCACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp CCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATCGTTAGGAGTATCAAATaGTCTTCCCAGAGTGAAAGC +
Preference number: 3 (lower is better)
Translates to: PDHAKGKLKLELATLGGIVRSIK*SSQSES
Trigger: GCTTTCACTCTGGGAAGACAATTTGATACTCCTAAC...GATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCACATGCAGTCAGAGTTaGGGCAAGTCATCCTCTGGT +
Preference number: 3 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSTCSQS*GKSSSG
Trigger: ACCAGAGGATGACTTGCCCAAACTCTGACTGCATGT...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 72 bp TTATACAAGGGCCCCAAGAGTCCTATGCACAGTTTGTaGCCAGATTGCAGGAAGCAGCTGAGAGAATTTTGG +
Preference number: 3 (lower is better)
Translates to: LYKGPKSPMHSL*PDCRKQLREFW
Trigger: CCAAAATTCTCTCAGCTGCTTCCTGCAATCTGGTCACAAACTGTGCATAGGACTCTTGGGGCCCTTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 72 bp GGGTATGTTCCCAGCCAGACTGCACAGATGCACACTTaGATGATGGAACCACAGCAGACTATAACATTTGAG +
Preference number: 3 (lower is better)
Translates to: GYVPSQTAQMHT*MMEPQQTITFE
Trigger: CTCAAATGTTATAGTCTGCTGTGGTTCCATCATTCAAGTGTGCATCTGTGCAGTCTGGCTGGGAACATACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
3UTR GCA 72 bp CCCACTGATAAGTACCTGTACTTCCCCTTTTGCTTATaGAATTCTACTGTCCCATCCTTCCTGCTGAAAGGC +
Preference number: 3 (lower is better)
Translates to: PTDKYLYFPFCL*NSTVPSFLLKG
Trigger: GCCTTTCAGCAGGAAGGATGGGACAGTAGAATTGCATAAGCAAAAGGGGAAGTACAGGTACTTATCAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 72 bp TCCCAGCGTAACTGCCTAAAGAATTTGCAATTCTATTaGCCCACCCCTCCCACTGATAAGTACCTGTACTTC +
Preference number: 3 (lower is better)
Translates to: SQRNCLKNLQFY*PTPPTDKYLYF
Trigger: GAAGTACAGGTACTTATCAGTGGGAGGGGTGGGGCAATAGAATTGCAAATTCTTTAGGCAGTTACGCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 72 bp ACCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTaGAACATTGGGAGGAATCACTGTTTAACCATGGTC +
Preference number: 3 (lower is better)
Translates to: TRSCQGQTQVGA*NIGRNHCLTMV
Trigger: GACCATGGTTAAACAGTGATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp GAGAAAGACATAGACTGTTTCAGGAGCAGTTCCAACTaGATGGCAGGAATCTCACTTCCTGGTTGGAGCTTA +
Preference number: 3 (lower is better)
Translates to: EKDIDCFRSSSN*MAGISLPGWSL
Trigger: TAAGCTCCAACCAGGAAGTGAGATTCCTGCCATCCAGTTGGAACTGCTCCTGAAACAGTCTATGTCTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp AGTTCTCCAAAGGGAAGCCTCATTGTAAGCTTTGTGCTGAATTCTTTGCTCTGTATAGGAAGTTGTGTGTaGGGTCCAGGCATGCTTCCA +
Preference number: 3 (lower is better)
Translates to: SSPKGSLIVSFVLNSLLCIGSCV*GPGMLP
Trigger: TGGAAGCATGCCTGGACCCAACACACAACTTCCTAT...ACAGAGCAAAGAATTCAGCACAAAGCTTACAATGAGGCTTCCCTTTGGAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ACCCTATGGGTGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTGTGTCTAGGCCAATTTTTAACTaGGAAGTCAGAGTTCGTGGA +
Preference number: 3 (lower is better)
Translates to: TLWVEQQYELTSTPRAVSRPIFN*EVRVRG
Trigger: TCCACGAACTCTGACTTCCAAGTTAAAAATTGGCCT...AGACACAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCCATAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 72 bp CCCCTCATTACAACAGAGGATGATGTGACCAAATTCTaGGTGCATGTCAACATCAGGGAAAGGTGGGTATGT +
Preference number: 3 (lower is better)
Translates to: PLITTEDDVTKF*VHVNIRERWVC
Trigger: ACATACCCACCTTTCCCTGATGTTGACATGCACTCAGAATTTGGTCACATCATCCTCTGTTGTAATGAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
3UTR TCA 72 bp GCAAGAGTGGACCCCTCATTACAACAGAGGATGATGTaGCCAAATTCTGAGTGCATGTCAACATCAGGGAAA +
Preference number: 3 (lower is better)
Translates to: ARVDPSLQQRMM*PNSECMSTSGK
Trigger: TTTCCCTGATGTTGACATGCACTCAGAATTTGGTCACATCATCCTCTGTTGTAATGAGGGGTCCACTCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
3UTR GCA 72 bp GGTGGCCGTGGAAATTCTTTCAATTCTAGCCTCCAGTaGTGGCTTACTGGGATGTATATTTCTTCCCAAATG +
Preference number: 3 (lower is better)
Translates to: GGRGNSFNSSLQ*WLTGMYISSQM
Trigger: CATTTGGGAAGAAATATACATCCCAGTAAGCCAGCACTGGAGGCTAGAATTGAAAGAATTTCCACGGCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp ACAATCACATTCAGCATGCTGGGTTTCTGCAGTGTGTaGATTTCTTTCATACCCACTTACCTGAGCTCGAAG +
Preference number: 3 (lower is better)
Translates to: TITFSMLGFCSV*ISFIPTYLSSK
Trigger: CTTCGAGCTCAGGTAAGTGGGTATGAAAGAAATCCACACACTGCAGAAACCCAGCATGCTGAATGTGATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCAGCCCCCATGGGAGATaGTGCAGGGTTCCAACAGAG +
Preference number: 3 (lower is better)
Translates to: LFICYRETPIVRANNRNLSPHGR*CRVPTE
Trigger: CTCTGTTGGAACCCTGCACAATCTCCCATGGGGGCT...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGCTAGCCAGTCTCAGCTaGCTTATTGCTTTTCTGGCT +
Preference number: 3 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVLASLS*LIAFLA
Trigger: AGCCAGAAAAGCAATAAGCAAGCTGAGACTGGCTAG...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp TTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATTGTGGTTGTGGCTTTACATGCAGTCAGAGTTaGGGCAAGTCATCCTCTGGT +
Preference number: 3 (lower is better)
Translates to: FHCHFCYLGKDLHCGCGFTCSQS*GKSSSG
Trigger: ACCAGAGGATGACTTGCCCAAACTCTGACTGCATGT...AAAGCCACAACCACAATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCATTTGTGCTACTCCTTaGAGCCTTGTGAAAGCTAGC +
Preference number: 3 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSICATP*SLVKAS
Trigger: GCTAGCTTTCACAAGGCTCAAAGGAGTAGCACAAAT...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 72 bp GACCAGAATTGCAGCCCTTGTGTTGTCTCAACAGAATaGGTGCCAATTACTATCTGCTCAATGAGGCTATTA +
Preference number: 3 (lower is better)
Translates to: DQNCSPCVVSTE*VPITICSMRLL
Trigger: TAATAGCCTCATTGAGCAGATAGTAATTGGCACGCATTCTGTTGAGACAACACAAGGGCTGCAATTCTGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp ATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTaGGAGGAATCACTGTTTAACCATGGTCAAAAACCT +
Preference number: 3 (lower is better)
Translates to: MPRANSSWSLQH*EESLFNHGQKP
Trigger: AGGTTTTTGACCATGGTTAAACAGTGATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp GGCCGTGGAAATTCTTTCAATTCTAGCCTCCAGTGCTaGCTTACTGGGATGTATATTTCTTCCCAAATGCTA +
Preference number: 3 (lower is better)
Translates to: GRGNSFNSSLQC*LTGMYISSQML
Trigger: TAGCATTTGGGAAGAAATATACATCCCAGTAAGCCAGCACTGGAGGCTAGAATTGAAAGAATTTCCACGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp GCCAATTCGGCATGTAGGGCTGCCCTGAGAGGTAAAATCAATAGTTTAGATATAAGAAGGGGAGTAGATTaGCCCTTTCTACAACAAGGA +
Preference number: 3 (lower is better)
Translates to: ANSACRAALRGKINSLDIRRGVD*PFLQQG
Trigger: TCCTTGTTGTAGAAAGGGCAAATCTACTCCCCTTCT...TATATCTAAACTATTGATTTTACCTCTCAGGGCAGCCCTACATGCCGAATTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGAGAAGGGGAGTAGATTaGCCCTTTCTACAACAAGGA +
Preference number: 3 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVRRGVD*PFLQQG
Trigger: TCCTTGTTGTAGAAAGGGCAAATCTACTCCCCTTCT...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp TGGCCCTTGCCAGAGATTTGCAATAACACGTTTCAAGTAAATAAAAATAGGTATGATCGAGGTGCCTCCTaGCCATCCCACCACAAAAGA +
Preference number: 3 (lower is better)
Translates to: WPLPEICNNTFQVNKNRYDRGAS*PSHHKR
Trigger: TCTTTTGTGGTGGGATGGCAAGGAGGCACCTCGATC...ATACCTATTTTTATTTACTTGAAACGTGTTATTGCAAATCTCTGGCAAGGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ATCATGTATCCTAAACCATGTGGGCTTTCAGATATCTTCTCTTATATAGCTAAGGATCGAGGTGCCTCCTaGCCATCCCACCACAAAAGA +
Preference number: 3 (lower is better)
Translates to: IMYPKPCGLSDIFSYIAKDRGAS*PSHHKR
Trigger: TCTTTTGTGGTGGGATGGCAAGGAGGCACCTCGATC...CTTAGCTATATAAGAGAAGATATCTGAAAGCCCACATGGTTTAGGATACATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGCAGTTTGTGACCAGATaGCAGGAAGCAGCTGAGAGA +
Preference number: 3 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLQFVTR*QEAAER
Trigger: TCTCTCAGCTGCTTCCTGCAATCTGGTCACAAACTG...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGGCAGGAGAAGGCTACTaGATACCCAATGAATGGAAT +
Preference number: 3 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVAGEGY*IPNEWN
Trigger: ATTCCATTCATTGGGTATCAAGTAGCCTTCTCCTGC...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCACCACGGGGAATGTTTaGTCCAAAGAGACAGTTTTT +
Preference number: 3 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSTTGNV*SKETVF
Trigger: AAAAACTGTCTCTTTGGACAAAACATTCCCCGTGGT...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCGTTAGGAGTATCAAATaGTCTTCCCAGAGTGAAAGC +
Preference number: 3 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSVRSIK*SSQSES
Trigger: GCTTTCACTCTGGGAAGACAATTTGATACTCCTAAC...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACCTAGCCAGTCTCAGCTaGCTTATTGCTTTTCTGGCT +
Preference number: 3 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYLASLS*LIAFLA
Trigger: AGCCAGAAAAGCAATAAGCAAGCTGAGACTGGCTAG...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCAGCAGGGATATTTCCTaGAGAACTCAACAATTGCTC +
Preference number: 3 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSSRDIS*RTQQLL
Trigger: GAGCAATTGTTGAGTTCTCAAGGAAATATCCCTGCT...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 72 bp TTCTCTATGCTCAGGGAGAACATGGATGAGAGCATATaGAGACTCACAGAGGAAACACAGACATGTTTATCC +
Preference number: 3 (lower is better)
Translates to: FSMLRENMDESI*RLTEETQTCLS
Trigger: GGATAAACATGTCTGTGTTTCCTCTGTGAGTCTTCATATGCTCTCATCCATGTTCTCCCTGAGCATAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 72 bp CCAGGCATGCTTCCACGGTGGCCCTTGCCAGAGATTTaGAATAACACGTTTCAAGTAAATAAAAATAGGTAT +
Preference number: 3 (lower is better)
Translates to: PGMLPRWPLPEI*NNTFQVNKNRY
Trigger: ATACCTATTTTTATTTACTTGAAACGTGTTATTGCAAATCTCTGGCAAGGGCCACCGTGGAAGCATGCCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 72 bp AATATTAGAATGACTGTGAGCATCCACTTCTGTATTTaGCAGAAACACAGGGCCCCTAATGAAGGAGCTAAG +
Preference number: 3 (lower is better)
Translates to: NIRMTVSIHFCI*QKHRAPNEGAK
Trigger: CTTAGCTCCTTCATTAGGGGCCCTGTGTTTCTGGCAAATACAGAAGTGGATGCTCACAGTCATTCTAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp TTTAGTATTCATGAATCAGATGACTTACTGAAGTTTTaGGATCGAGGTGCCTCCTTGCCATCCCACCACAAA +
Preference number: 3 (lower is better)
Translates to: FSIHESDDLLKF*DRGASLPSHHK
Trigger: TTTGTGGTGGGATGGCAAGGAGGCACCTCGATCCCAAAACTTCAGTAAGTCATCTGATTCATGAATACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp GTTCAGTCTGTCCTCACTAGAGGCCAATTTTTAACTTaGAAGTCAGAGTTCGTGGACAGAGGAGAAAATTTG +
Preference number: 3 (lower is better)
Translates to: VQSVLTRGQFLT*KSEFVDRGENL
Trigger: CAAATTTTCTCCTCTGTCCACGAACTCTGACTTCCAAGTTAAAAATTGGCCTCTAGTGAGGACAGACTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp TTGTCATTTCTGCTATCTTGGCAAAGACCTTCATTGTaGTTGTGGCTTTCAAAGCCATCAAACCAGGAAGCA +
Preference number: 3 (lower is better)
Translates to: LSFLLSWQRPSL*LWLSKPSNQEA
Trigger: TGCTTCCTGGTTTGATGGCTTTGAAAGCCACAACCACAATGAAGGTCTTTGCCAAGATAGCAGAAATGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp TTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATTGTGGTTGTGGCTTTAGAAGGGGAGTAGATTaGCCCTTTCTACAACAAGGA +
Preference number: 3 (lower is better)
Translates to: FHCHFCYLGKDLHCGCGFRRGVD*PFLQQG
Trigger: TCCTTGTTGTAGAAAGGGCAAATCTACTCCCCTTCT...AAAGCCACAACCACAATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ATACATTTTTCCAAACAGTGGCATCTGCAACTTAATCACTTTTCCCTGTTATCCGCAGCTGAGAGAATTTaGGGACCTGAGGAAAGTGAG +
Preference number: 3 (lower is better)
Translates to: IHFSKQWHLQLNHFSLLSAAERI*GPEESE
Trigger: CTCACTTTCCTCAGGTCCCAAAATTCTCTCAGCTGC...GGATAACAGGGAAAAGTGATTAAGTTGCAGATGCCACTGTTTGGAAAAATGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp AGTTCTCCAAAGGGAAGCCTCATTGTAAGCTTTGTGCTGAATTCTTTGCTCTGTAACTGCCTAAAGAATTaGCAATTCTATTGCCCCACC +
Preference number: 3 (lower is better)
Translates to: SSPKGSLIVSFVLNSLLCNCLKN*QFYCPT
Trigger: GGTGGGGCAATAGAATTGCAAATTCTTTAGGCAGTT...ACAGAGCAAAGAATTCAGCACAAAGCTTACAATGAGGCTTCCCTTTGGAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACTCAGTGGATAGTCTCTaGAGAGAGCAAACATCCTTC +
Preference number: 3 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYSVDSL*REQTSF
Trigger: GAAGGATGTTTGCTCTCTCAAGAGACTATCCACTGA...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACGTCAAGTGCAGAGTTTaGTGCTCTTCTCTATGCTCA +
Preference number: 3 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYVKCRV*CSSLCS
Trigger: TGAGCATAGAGAAGAGCACAAAACTCTGCACTTGAC...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCGGCCTTGATAAATTCTaGTATGAGTGTAACTTGGCT +
Preference number: 3 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSGLDKF*YECNLA
Trigger: AGCCAAGTTACACTCATACAAGAATTTATCAAGGCC...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 72 bp ACAGCTTCAATGAGGCAAAAACAATCACATTCAGCATaGTGGGTTTCTGCAGTGTGTGGATTTCTTTCATAC +
Preference number: 3 (lower is better)
Translates to: TASMRQKQSHSA*WVSAVCGFLSY
Trigger: GTATGAAAGAAATCCACACACTGCAGAAACCCAGCATGCTGAATGTGATTGTTTTTGCCTCATTGAAGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp AGAGGAATCAGTGTCTCCCTAAAATTATGGTATTTTTaGCCCATGAAGATCCACTGGGAACTGTTCTTGTCT +
Preference number: 3 (lower is better)
Translates to: RGISVSLKLWYF*PMKIHWELFLS
Trigger: AGACAAGAACAGTTCCCAGTGGATCTTCATGGGCCAAAAATACCATAATTTTAGGGAGACACTGATTCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ATCATGTATCCTAAACCATGTGGGCTTTCAGATATCTTCTCTTATATAGCTAAGATAGGAAGTTGTGTGTaGGGTCCAGGCATGCTTCCA +
Preference number: 3 (lower is better)
Translates to: IMYPKPCGLSDIFSYIAKIGSCV*GPGMLP
Trigger: TGGAAGCATGCCTGGACCCAACACACAACTTCCTAT...CTTAGCTATATAAGAGAAGATATCTGAAAGCCCACATGGTTTAGGATACATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCGCAGCTGAGAGAATTTaGGGACCTGAGGAAAGTGAG +
Preference number: 3 (lower is better)
Translates to: LFICYRETPIVRANNRNLAAERI*GPEESE
Trigger: CTCACTTTCCTCAGGTCCCAAAATTCTCTCAGCTGC...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGGCAGGAGAAGGCTACTaGATACCCAATGAATGGAAT +
Preference number: 3 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLAGEGY*IPNEWN
Trigger: ATTCCATTCATTGGGTATCAAGTAGCCTTCTCCTGC...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACCCTGTACTTCCCCTTTaGCTTATGCAATTCTACTGT +
Preference number: 3 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYPVLPL*LMQFYC
Trigger: ACAGTAGAATTGCATAAGCAAAAGGGGAAGTACAGG...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGAGACCTTCATTGTGGTaGTGGCTTTCAAAGCCATCA +
Preference number: 3 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLRPSLW*WLSKPS
Trigger: TGATGGCTTTGAAAGCCACAACCACAATGAAGGTCT...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACGTCATTTCTGCTATCTaGGCAAAGACCTTCATTGTG +
Preference number: 3 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYVISAI*AKTFIV
Trigger: CACAATGAAGGTCTTTGCCAAGATAGCAGAAATGAC...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCAAAATTATGGTATTTTaGGCCCATGAAGATCCACTG +
Preference number: 3 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSKIMVF*AHEDPL
Trigger: CAGTGGATCTTCATGGGCCAAAAATACCATAATTTT...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp GAGGCTATTAGCCAAGATATAGAGAATATAAAAAGGGGCCTAGATGGTCTTACTTGCAGAAGCCATTGTTaGGTGAAATGCATTGACTAC +
Preference number: 3 (lower is better)
Translates to: EAISQDIENIKRGLDGLTCRSHC*VKCIDY
Trigger: GTAGTCAATGCATTTCACCAAACAATGGCTTCTGCA...AGTAAGACCATCTAGGCCCCTTTTTATATTCTCTATATCTTGGCTAATAGCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGGATTTTAATCTTGGTTaGACAAGCTGCCTCTTACAA +
Preference number: 3 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVDFNLG*TSCLLQ
Trigger: TTGTAAGAGGCAGCTTGTCAAACCAAGATTAAAATC...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp AGTTCTCCAAAGGGAAGCCTCATTGTAAGCTTTGTGCTGAATTCTTTGCTCTGTCTCCCCAATCCTACATaGTGTCAAAAATTCATAGAT +
Preference number: 3 (lower is better)
Translates to: SSPKGSLIVSFVLNSLLCLPNPT*CQKFID
Trigger: ATCTATGAATTTTTGACACAATGTAGGATTGGGGAG...ACAGAGCAAAGAATTCAGCACAAAGCTTACAATGAGGCTTCCCTTTGGAGAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACATTAGGACAAAACTATaGTCCCGATCTCTGAATTGG +
Preference number: 3 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYIRTKL*SRSLNW
Trigger: CCAATTCAGAGATCGGGACAATAGTTTTGTCCTAAT...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp GTTTTAAACATGATTACCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCGAAATATTAGAATTGTaGAATCTACCTGTGCCCCTT +
Preference number: 3 (lower is better)
Translates to: VLNMITRSCQGQTQVGACEILEL*NLPVPL
Trigger: AAGGGGCACAGGTAGATTCAACAATTCTAATATTTC...GCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGGTAATCATGTTTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ATACATTTTTCCAAACAGTGGCATCTGCAACTTAATCACTTTTCCCTGTTATCCGTCAAGTGCAGAGTTTaGTGCTCTTCTCTATGCTCA +
Preference number: 3 (lower is better)
Translates to: IHFSKQWHLQLNHFSLLSVKCRV*CSSLCS
Trigger: TGAGCATAGAGAAGAGCACAAAACTCTGCACTTGAC...GGATAACAGGGAAAAGTGATTAAGTTGCAGATGCCACTGTTTGGAAAAATGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGGGATTGTATTTTCCATaGTCATTTCTGCTATCTTGG +
Preference number: 3 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVGLYFP*SFLLSW
Trigger: CCAAGATAGCAGAAATGACAATGGAAAATACAATCC...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp GCCAATTCGGCATGTAGGGCTGCCCTGAGAGGTAAAATCAATAGTTTAGATATAATTGTTTTTGCCTCATaGAAACTGTCAGGTAACCTT +
Preference number: 3 (lower is better)
Translates to: ANSACRAALRGKINSLDIIVFAS*KLSGNL
Trigger: AAGGTTACCTGACAGTTTCAATGAGGCAAAAACAAT...TATATCTAAACTATTGATTTTACCTCTCAGGGCAGCCCTACATGCCGAATTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
3UTR TCA 72 bp TTTGCTTATGCAATTCTACTGTCCCATCCTTCCTGCTaGAAGGCACTTCCCCTTTTTCTTGTACATTTAAAC +
Preference number: 3 (lower is better)
Translates to: FAYAILLSHPSC*KALPLFLVHLN
Trigger: GTTTAAATGTACAAGAAAAAGGGGAAGTGCCTTTCAGCAGGAAGGATGGGACAGTAGAATTGCATAAGCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 72 bp AGACACAGTGAACCAAGCCAACACAGATTAGATAATTaGAACTGTATATGGCCTTTGGTGTGTCTACTAGAT +
Preference number: 3 (lower is better)
Translates to: RHSEPSQHRLDN*NCIWPLVCLLD
Trigger: ATCTAGTAGACACACCAAAGGCCATATACAGTTGCAATTATCTAATCTGTGTTGGCTTGGTTCACTGTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp CAAATAAACAGAGGAATCAGTGTCTCCCTAAAATTATaGTATTTTTGGCCCATGAAGATCCACTGGGAACTG +
Preference number: 3 (lower is better)
Translates to: QINRGISVSLKL*YFWPMKIHWEL
Trigger: CAGTTCCCAGTGGATCTTCATGGGCCAAAAATACCATAATTTTAGGGAGACACTGATTCCTCTGTTTATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ATACATTTTTCCAAACAGTGGCATCTGCAACTTAATCACTTTTCCCTGTTATCCTGCAGAAGCCATTGTTaGGTGAAATGCATTGACTAC +
Preference number: 3 (lower is better)
Translates to: IHFSKQWHLQLNHFSLLSCRSHC*VKCIDY
Trigger: GTAGTCAATGCATTTCACCAAACAATGGCTTCTGCA...GGATAACAGGGAAAAGTGATTAAGTTGCAGATGCCACTGTTTGGAAAAATGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGTCTATATTGTCTTCTTaGTTAGGCCCTTCAAAAGGG +
Preference number: 3 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLSILSS*LGPSKG
Trigger: CCCTTTTGAAGGGCCTAACAAAGAAGACAATATAGA...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp GAGGCTATTAGCCAAGATATAGAGAATATAAAAAGGGGCCTAGATGGTCTTACTAGAAGTTTTGGATGCTaGCCAGAAGCTGTTAGAAAA +
Preference number: 3 (lower is better)
Translates to: EAISQDIENIKRGLDGLTRSFGC*PEAVRK
Trigger: TTTTCTAACAGCTTCTGGCAAGCATCCAAAACTTCT...AGTAAGACCATCTAGGCCCCTTTTTATATTCTCTATATCTTGGCTAATAGCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACAATAAATTAGAAGTTTaGGATGCTTGCCAGAAGCTG +
Preference number: 3 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYNKLEV*DACQKL
Trigger: CAGCTTCTGGCAAGCATCCAAAACTTCTAATTTATT...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ATACATTTTTCCAAACAGTGGCATCTGCAACTTAATCACTTTTCCCTGTTATCCACCACGGGGAATGTTTaGTCCAAAGAGACAGTTTTT +
Preference number: 3 (lower is better)
Translates to: IHFSKQWHLQLNHFSLLSTTGNV*SKETVF
Trigger: AAAAACTGTCTCTTTGGACAAAACATTCCCCGTGGT...GGATAACAGGGAAAAGTGATTAAGTTGCAGATGCCACTGTTTGGAAAAATGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp AAATCCTTGTTTTCTAGAGCCAGTTTCTCTCTTGAAGCCTTGAACCATTATGTTACCACGGGGAATGTTTaGTCCAAAGAGACAGTTTTT +
Preference number: 3 (lower is better)
Translates to: KSLFSRASFSLEALNHYVTTGNV*SKETVF
Trigger: AAAAACTGTCTCTTTGGACAAAACATTCCCCGTGGT...AACATAATGGTTCAAGGCTTCAAGAGAGAAACTGGCTCTAGAAAACAAGGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ACTGGCAGAGGCTTAGCTATGTCAGAATACACTTTAAAGGCACTTATAATAAAATCAGTGGATAGTCTCTaGAGAGAGCAAACATCCTTC +
Preference number: 3 (lower is better)
Translates to: TGRGLAMSEYTLKALIIKSVDSL*REQTSF
Trigger: GAAGGATGTTTGCTCTCTCAAGAGACTATCCACTGA...TTTTATTATAAGTGCCTTTAAAGTGTATTCTGACATAGCTAAGCCTCTGCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 72 bp ATTAAACTGCAGAAGCCATTGTTTGGTGAAATGCATTaGCTACACCCTACTCCTTTGAATATTCCAACATGG +
Preference number: 3 (lower is better)
Translates to: IKLQKPLFGEMH*LHPTPLNIPTW
Trigger: CCATGTTGGAATATTCAAAGGAGTAGGGTGTAGTCAATGCATTTCACCAAACAATGGCTTCTGCAGTTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR TCA 72 bp TTACACCCATTGAAATCTATTCTCAATGAGGGAATGTaGATGATGGTAAATGTGGGCATGGAGAAGAGGTAT +
Preference number: 3 (lower is better)
Translates to: LHPLKSILNEGM*MMVNVGMEKRY
Trigger: ATACCTCTTCTCCATGCCCACATTTACCATCATTCACATTCCCTCATTGAGAATAGATTTCAATGGGTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp TTTTGTTTTGTGGATGAGAGATGTCCATGGCTGGTATaGAATGGTTCTGAAATACACCCTTTAACTTGGAAT +
Preference number: 3 (lower is better)
Translates to: FCFVDERCPWLV*NGSEIHPLTWN
Trigger: ATTCCAAGTTAAAGGGTGTATTTCAGAACCATTCCATACCAGCCATGGACATCTCTCATCCACAAAACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp AAATCCTTGTTTTCTAGAGCCAGTTTCTCTCTTGAAGCCTTGAACCATTATGTTAGAAGTTTTGGATGCTaGCCAGAAGCTGTTAGAAAA +
Preference number: 3 (lower is better)
Translates to: KSLFSRASFSLEALNHYVRSFGC*PEAVRK
Trigger: TTTTCTAACAGCTTCTGGCAAGCATCCAAAACTTCT...AACATAATGGTTCAAGGCTTCAAGAGAGAAACTGGCTCTAGAAAACAAGGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGAATAAATTAGAAGTTTaGGATGCTTGCCAGAAGCTG +
Preference number: 3 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLNKLEV*DACQKL
Trigger: CAGCTTCTGGCAAGCATCCAAAACTTCTAATTTATT...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ATCATGTATCCTAAACCATGTGGGCTTTCAGATATCTTCTCTTATATAGCTAAGAACTGCCTAAAGAATTaGCAATTCTATTGCCCCACC +
Preference number: 3 (lower is better)
Translates to: IMYPKPCGLSDIFSYIAKNCLKN*QFYCPT
Trigger: GGTGGGGCAATAGAATTGCAAATTCTTTAGGCAGTT...CTTAGCTATATAAGAGAAGATATCTGAAAGCCCACATGGTTTAGGATACATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGACAGTCACTTGTGTCTaGAGACAAATTATTTTTGGG +
Preference number: 3 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLTVTCV*RQIIFG
Trigger: CCCAAAAATAATTTGTCTCAAGACACAAGTGACTGT...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CCA 72 bp AATAATAGAAAGAATCCTACTAGTAAGACAGCCTCCTaGACTGCTGATAAAATCTGTGGTAAAGGCAATTTC +
Preference number: 3 (lower is better)
Translates to: NNRKNPTSKTAS*TADKICGKGNF
Trigger: GAAATTGCCTTTACCACAGATTTTATCAGCAGTCCAGGAGGCTGTCTTACTAGTAGGATTCTTTCTATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ATCATGTATCCTAAACCATGTGGGCTTTCAGATATCTTCTCTTATATAGCTAAGATTAGGACAAAACTATaGTCCCGATCTCTGAATTGG +
Preference number: 3 (lower is better)
Translates to: IMYPKPCGLSDIFSYIAKIRTKL*SRSLNW
Trigger: CCAATTCAGAGATCGGGACAATAGTTTTGTCCTAAT...CTTAGCTATATAAGAGAAGATATCTGAAAGCCCACATGGTTTAGGATACATGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCGGTGAGTTGCTTCTTTaGTCAATAAAAACAGCACAG +
Preference number: 3 (lower is better)
Translates to: LFICYRETPIVRANNRNLGELLL*SIKTAQ
Trigger: CTGTGCTGTTTTTATTGACAAAAGAAGCAACTCACC...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ATCATGTATCCTAAACCATGTGGGCTTTCAGATATCTTCTCTTATATAGCTAAGGATTTTAATCTTGGTTaGACAAGCTGCCTCTTACAA +
Preference number: 3 (lower is better)
Translates to: IMYPKPCGLSDIFSYIAKDFNLG*TSCLLQ
Trigger: TTGTAAGAGGCAGCTTGTCAAACCAAGATTAAAATC...CTTAGCTATATAAGAGAAGATATCTGAAAGCCCACATGGTTTAGGATACATGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCAATAAATTAGAAGTTTaGGATGCTTGCCAGAAGCTG +
Preference number: 3 (lower is better)
Translates to: LFICYRETPIVRANNRNLNKLEV*DACQKL
Trigger: CAGCTTCTGGCAAGCATCCAAAACTTCTAATTTATT...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ATCATGTATCCTAAACCATGTGGGCTTTCAGATATCTTCTCTTATATAGCTAAGCTCCCCAATCCTACATaGTGTCAAAAATTCATAGAT +
Preference number: 3 (lower is better)
Translates to: IMYPKPCGLSDIFSYIAKLPNPT*CQKFID
Trigger: ATCTATGAATTTTTGACACAATGTAGGATTGGGGAG...CTTAGCTATATAAGAGAAGATATCTGAAAGCCCACATGGTTTAGGATACATGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCGACAGAGGAGAAAATTaGGCTGCAAATAATAGAAAG +
Preference number: 3 (lower is better)
Translates to: LFICYRETPIVRANNRNLDRGEN*AANNRK
Trigger: CTTTCTATTATTTGCAGCCAAATTTTCTCCTCTGTC...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR-3UTR CAA 90 bp ATCATGTATCCTAAACCATGTGGGCTTTCAGATATCTTCTCTTATATAGCTAAGGAAATATTAGAATTGTaGAATCTACCTGTGCCCCTT +
Preference number: 3 (lower is better)
Translates to: IMYPKPCGLSDIFSYIAKEILEL*NLPVPL
Trigger: AAGGGGCACAGGTAGATTCAACAATTCTAATATTTC...CTTAGCTATATAAGAGAAGATATCTGAAAGCCCACATGGTTTAGGATACATGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR GCA 72 bp CAAGGAGGCTTATATGCTGCACTTAAGGAAGAATGCTaGGTATATGTTGATAAAACTGGATTAGTTAAAGAT +
Preference number: 3 (lower is better)
Translates to: QGGLYAALKEEC*VYVDKTGLVKD
Trigger: ATCTTTAACTAATCCAGTTTTATCAACATATACGCAGCATTCTTCCTTAAGTGCAGCATATAAGCCTCCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CAA 72 bp TTCTTGGCCTGGGTGCTGCTGGGACCGGGACCAGAATaGCAGCCCTTGTGTTGTCTCAACAGAATGCGTGCC +
Preference number: 4 (lower is better)
Translates to: FLAWVLLGPGPE*QPLCCLNRMRA
Trigger: GGCACGCATTCTGTTGAGACAACACAAGGGCTGCAATTCTGGTCCCGGTCCCAGCAGCACCCAGGCCAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CAA 72 bp AGTCAGTTCAGCTTCTCTGGGATAGGAAGTTGTGTGTaGGGTCCAGGCATGCTTCCACGGTGGCCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: SQFSFSGIGSCV*GPGMLPRWPLP
Trigger: TGGCAAGGGCCACCGTGGAAGCATGCCTGGACCCAACACACAACTTCCTATCCCAGAGAAGCTGAACTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CAA 72 bp CCTTTCGAGTCAGTTCAGCTTCTCTGGGATAGGAAGTaGTGTGTTGGGTCCAGGCATGCTTCCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PFESVQLLWDRK*CVGSRHASTVA
Trigger: GGCCACCGTGGAAGCATGCCTGGACCCAACACACAACTTCCTATCCCAGAGAAGCTGAACTGACTCGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp CTTGCAGTCCTTCTTGGCCTGGGTGCTGCTGGGACCGGGACCAGAATTGCAGCCAATAGAAGGCAAGAGTaGACCCCTCATTACAACAGA +
Preference number: 4 (lower is better)
Translates to: LAVLLGLGAAGTGTRIAANRRQE*TPHYNR
Trigger: TCTGTTGTAATGAGGGGTCCACTCTTGCCTTCTATT...GGCTGCAATTCTGGTCCCGGTCCCAGCAGCACCCAGGCCAAGAAGGACTGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp GCTTGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTGCTACACAAAGTCCATaGTTTGTCATCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: AWCTVPAAGALTTPLTKIATQSP*FVISSV
Trigger: CACAGAGGAGATGACAAATCATGGACTTTGTGTAGC...AATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR TCA 90 bp TGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTATATCGCCAACTTTCACTTaGGCTTTGGTACCACTCTGC +
Preference number: 4 (lower is better)
Translates to: WCTVPAAGALTTPLTKIISPTFT*ALVPLC
Trigger: GCAGAGTGGTACCAAAGCTCAAGTGAAAGTTGGCGA...TATAATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp GGAGGTGAGGCCCTTGGTCTTGTGAAGATAATATGCCCCAGTACAGGGGAATGCAACATCAGGGAAAGGTaGGTATGTTCCCAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: GGEALGLVKIICPSTGECNIRER*VCSQPD
Trigger: GTCTGGCTGGGAACATACCCACCTTTCCCTGATGTT...GCATTCCCCTGTACTGGGGCATATTATCTTCACAAGACCAAGGGCCTCACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp GCTTGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTCCAAGTGGACAACTTTaGCTACAAGCAGATAAAGGA +
Preference number: 4 (lower is better)
Translates to: AWCTVPAAGALTTPLTKIPSGQL*LQADKG
Trigger: TCCTTTATCTGCTTGTAGTCAAAGTTGTCCACTTGG...AATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp GGAGGTGAGGCCCTTGGTCTTGTGAAGATAATATGCCCCAGTACAGGGGAATGCGCTACACAAAGTCCATaGTTTGTCATCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: GGEALGLVKIICPSTGECATQSP*FVISSV
Trigger: CACAGAGGAGATGACAAATCATGGACTTTGTGTAGC...GCATTCCCCTGTACTGGGGCATATTATCTTCACAAGACCAAGGGCCTCACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR TCA 90 bp CCTTTGAGCCTTGTGAAAGCTAGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTGTCAAGCTTGGTTGCTaGAACTTCCTTGTTCACAAC +
Preference number: 4 (lower is better)
Translates to: PLSLVKASTRGFCSSRPSVKLGC*NFLVHN
Trigger: GTTGTGAACAAGGAAGTTTCAGCAACCAAGCTTGAC...AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp GCTTGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTTTGTTTTTGCCTCATTaGAACTGTCAGGTAACCTTC +
Preference number: 4 (lower is better)
Translates to: AWCTVPAAGALTTPLTKILFLPH*NCQVTF
Trigger: GAAGGTTACCTGACAGTTTCAATGAGGCAAAAACAA...AATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp ACCCTATGGGTGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTGTGTCTGGAGTGCCTGGGCAATaGCATACACAGCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: TLWVEQQYELTSTPRAVSGVPGQ*HTQQHE
Trigger: TTCATGCTGCTGTGTATGCCATTGCCCAGGCACTCC...AGACACAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCCATAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR CCA 90 bp GGAGGTGAGGCCCTTGGTCTTGTGAAGATAATATGCCCCAGTACAGGGGAATGCCTCTCCATCTGGACATaGGGCACAATCAAAACAACA +
Preference number: 4 (lower is better)
Translates to: GGEALGLVKIICPSTGECLSIWT*GTIKTT
Trigger: TGTTGTTTTGATTGTGCCCCATGTCCAGATGGAGAG...GCATTCCCCTGTACTGGGGCATATTATCTTCACAAGACCAAGGGCCTCACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp CCTTTGAGCCTTGTGAAAGCTAGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTCTCTCCATCTGGACATaGGGCACAATCAAAACAACA +
Preference number: 4 (lower is better)
Translates to: PLSLVKASTRGFCSSRPSLSIWT*GTIKTT
Trigger: TGTTGTTTTGATTGTGCCCCATGTCCAGATGGAGAG...AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp CCTTTGAGCCTTGTGAAAGCTAGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTTGCAATCTCTCCATCTaGACATGGGGCACAATCAAA +
Preference number: 4 (lower is better)
Translates to: PLSLVKASTRGFCSSRPSCNLSI*TWGTIK
Trigger: TTTGATTGTGCCCCATGTCCAGATGGAGAGATTGCA...AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
3UTR CAA 72 bp GTTCTGGGGTACTTGGGCTTTCTAGCCAGTCTCAGCTaGCTTATTGCTTTTCTGGCTAGAAGGCTACCTGAC +
Preference number: 4 (lower is better)
Translates to: VLGYLGFLASLS*LIAFLARRLPD
Trigger: GTCAGGTAGCCTTCTAGCCAGAAAAGCAATAAGCAAGCTGAGACTGGCTAGAAAGCCCAAGTACCCCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp GGAGGTGAGGCCCTTGGTCTTGTGAAGATAATATGCCCCAGTACAGGGGAATGCGCTGATAATGTCTGGTaGGATCCACATGAACAACAT +
Preference number: 4 (lower is better)
Translates to: GGEALGLVKIICPSTGECADNVW*DPHEQH
Trigger: ATGTTGTTCATGTGGATCTCACCAGACATTATCAGC...GCATTCCCCTGTACTGGGGCATATTATCTTCACAAGACCAAGGGCCTCACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp TGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTATAGCTGATAATGTCTGGTaGGATCCACATGAACAACAT +
Preference number: 4 (lower is better)
Translates to: WCTVPAAGALTTPLTKIIADNVW*DPHEQH
Trigger: ATGTTGTTCATGTGGATCTCACCAGACATTATCAGC...TATAATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp GGAGGTGAGGCCCTTGGTCTTGTGAAGATAATATGCCCCAGTACAGGGGAATGCTTCTGTTATTTGCTCTaGCAATGGATGTGTCCCGAT +
Preference number: 4 (lower is better)
Translates to: GGEALGLVKIICPSTGECFCYLL*QWMCPD
Trigger: ATCGGGACACATCCATTGTCAGAGCAAATAACAGAA...GCATTCCCCTGTACTGGGGCATATTATCTTCACAAGACCAAGGGCCTCACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp CCTTTGAGCCTTGTGAAAGCTAGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTCTCGGGAGATCTGAGTaGATATTGATGTTGAAATGC +
Preference number: 4 (lower is better)
Translates to: PLSLVKASTRGFCSSRPSLGRSE*ILMLKC
Trigger: GCATTTCAACATCAATATCCACTCAGATCTCCCGAG...AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CAA 72 bp TGTGTGTTGGGTCCAGGCATGCTTCCACGGTGGCCCTaGCCAGAGATTTGCAATAACACGTTTCAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: CVLGPGMLPRWP*PEICNNTFQVN
Trigger: ATTTACTTGAAACGTGTTATTGCAAATCTCTGGCAAGGGCCACCGTGGAAGCATGCCTGGACCCAACACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp GTTTTAAACATGATTACCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCTGGATGGAGCTTCCATaGCAAAGGAGGCCGGAGTAC +
Preference number: 4 (lower is better)
Translates to: VLNMITRSCQGQTQVGACWMELP*QRRPEY
Trigger: GTACTCCGGCCTCCTTTGCCATGGAAGCTCCATCCA...GCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGGTAATCATGTTTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR CCA 90 bp TGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTATATTTTGTAAGAATGGATaGAGCTTCCATGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: WCTVPAAGALTTPLTKIIFCKNG*SFHGKG
Trigger: TCCTTTGCCATGGAAGCTCCATCCATTCTTACAAAA...TATAATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR TCA 90 bp CCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATCAGCCCAGGGACATATTaGATAAAATATGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PDHAKGKLKLELATLGGISPGTY*IKYVGP
Trigger: AGGACCCACATATTTTATTCAATATGTCCCTGGGCT...GATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp AGTTCTCCAAAGGGAAGCCTCATTGTAAGCTTTGTGCTGAATTCTTTGCTCTGTAGTCTCCTTCCACTCTaGGTGACAGCTCCTCATGGA +
Preference number: 4 (lower is better)
Translates to: SSPKGSLIVSFVLNSLLCSLLPL*VTAPHG
Trigger: TCCATGAGGAGCTGTCACTCAGAGTGGAAGGAGACT...ACAGAGCAAAGAATTCAGCACAAAGCTTACAATGAGGCTTCCCTTTGGAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR TCA 90 bp CCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATCTACACTTTTATCAAGTaGGTCTCCTTCCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: PDHAKGKLKLELATLGGIYTFIK*VSFHSE
Trigger: CTCAGAGTGGAAGGAGACTCACTTGATAAAAGTGTA...GATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR GCA 90 bp CCTTTGAGCCTTGTGAAAGCTAGCACCAGGGGGTTCTGCTCTAGCAGACCTTCTGAGATTTCTGTTATTTaGTCTGACAATGGATGTGTC +
Preference number: 4 (lower is better)
Translates to: PLSLVKASTRGFCSSRPSEISVI*SDNGCV
Trigger: GACACATCCATTGTCAGAGCAAATAACAGAAATCTC...AGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp GGAGGTGAGGCCCTTGGTCTTGTGAAGATAATATGCCCCAGTACAGGGGAATGCGAATCACATAGCATTTaGGAAGAAACATACATCCCA +
Preference number: 4 (lower is better)
Translates to: GGEALGLVKIICPSTGECESHSI*EETYIP
Trigger: TGGGATGTATGTTTCTTCCCAAATGCTATGTGATTC...GCATTCCCCTGTACTGGGGCATATTATCTTCACAAGACCAAGGGCCTCACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp AGTTCTCCAAAGGGAAGCCTCATTGTAAGCTTTGTGCTGAATTCTTTGCTCTGTTCGCCAACTTTCACTTaGGCTTTGGTACCACTCTGC +
Preference number: 4 (lower is better)
Translates to: SSPKGSLIVSFVLNSLLCSPTFT*ALVPLC
Trigger: GCAGAGTGGTACCAAAGCTCAAGTGAAAGTTGGCGA...ACAGAGCAAAGAATTCAGCACAAAGCTTACAATGAGGCTTCCCTTTGGAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp TTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATTGTGGTTGTGGCTTTGGAGTGCCTGGGCAATaGCATACACAGCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: FHCHFCYLGKDLHCGCGFGVPGQ*HTQQHE
Trigger: TTCATGCTGCTGTGTATGCCATTGCCCAGGCACTCC...AAAGCCACAACCACAATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR CCA 90 bp GAGGCTATTAGCCAAGATATAGAGAATATAAAAAGGGGCCTAGATGGTCTTACTTGGATGGAGCTTCCATaGCAAAGGAGGCCGGAGTAC +
Preference number: 4 (lower is better)
Translates to: EAISQDIENIKRGLDGLTWMELP*QRRPEY
Trigger: GTACTCCGGCCTCCTTTGCCATGGAAGCTCCATCCA...AGTAAGACCATCTAGGCCCCTTTTTATATTCTCTATATCTTGGCTAATAGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
3UTR CAA 72 bp TACCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTaGCAACATTGGGAGGAATCACTGTTTAACCATGGT +
Preference number: 4 (lower is better)
Translates to: YQIMPRANSSWS*QHWEESLFNHG
Trigger: ACCATGGTTAAACAGTGATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp TCCTTGGTCTCCCTTTCAGATGTTGCTCTTCAAAATAGAAGGGGAGTAGATTTGCTGGTGAGATCCACATaGACAACATCCAGTGTATCC +
Preference number: 4 (lower is better)
Translates to: SLVSLSDVALQNRRGVDLLVRST*TTSSVS
Trigger: GGATACACTGGATGTTGTTCATGTGGATCTCACCAG...CAAATCTACTCCCCTTCTATTTTGAAGAGCAACATCTGAAAGGGAGACCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR GCA 90 bp CCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATCGAATGTGATTGTTTTTaGCTCATTGAAACTGTCAGG +
Preference number: 4 (lower is better)
Translates to: PDHAKGKLKLELATLGGIECDCF*LIETVR
Trigger: CCTGACAGTTTCAATGAGGCAAAAACAATCACATTC...GATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
3UTR CAA 72 bp GCCCATGAAGATCCACTGGGAACTGTTCTTGTCTCCTaGGCCATTAGTTTATCTGCCTTTTCAGCTATGATT +
Preference number: 4 (lower is better)
Translates to: AHEDPLGTVLVS*AISLSAFSAMI
Trigger: AATCATAGCTGAAAAGGCAGATAAACTAATGGCCAAGGAGACAAGAACAGTTCCCAGTGGATCTTCATGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CAA 72 bp CGCATCACCATCCACATTTGTAATCTGCTTCCTGGTTaGATGGCTTTGAAGGCTACAACCACAATAAAGGTC +
Preference number: 4 (lower is better)
Translates to: RITIHICNLLPG*MALKATTTIKV
Trigger: GACCTTTATTGTGGTTGTAGCCTTCAAAGCCATCAAACCAGGAAGCAGATTACAAATGTGGATGGTGATGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
CDS-3UTR TCA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACCTGGTGAGATCCACATaGACAACATCCAGTGTATCC +
Preference number: 4 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYLVRST*TTSSVS
Trigger: GGATACACTGGATGTTGTTCATGTGGATCTCACCAG...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp ACCCTATGGGTGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTGTGTCTCTAATCAGAAAATCATaGGTGTCACCAAATGCAACA +
Preference number: 4 (lower is better)
Translates to: TLWVEQQYELTSTPRAVSLIRKS*VSPNAT
Trigger: TGTTGCATTTGGTGACACTCATGATTTTCTGATTAG...AGACACAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCCATAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR TCA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGGTCAAGCTTGGTTGCTaGAACTTCCTTGTTCACAAC +
Preference number: 4 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVVKLGC*NFLVHN
Trigger: GTTGTGAACAAGGAAGTTTCAGCAACCAAGCTTGAC...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp GAGGCTATTAGCCAAGATATAGAGAATATAAAAAGGGGCCTAGATGGTCTTACTTCGCCAACTTTCACTTaGGCTTTGGTACCACTCTGC +
Preference number: 4 (lower is better)
Translates to: EAISQDIENIKRGLDGLTSPTFT*ALVPLC
Trigger: GCAGAGTGGTACCAAAGCTCAAGTGAAAGTTGGCGA...AGTAAGACCATCTAGGCCCCTTTTTATATTCTCTATATCTTGGCTAATAGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp ACCCTATGGGTGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTGTGTCTTGTTTATTCGGATACTaGTCTTCAGGACACTTGATA +
Preference number: 4 (lower is better)
Translates to: TLWVEQQYELTSTPRAVSCLFGY*SSGHLI
Trigger: TATCAAGTGTCCTGAAGATCAGTATCCGAATAAACA...AGACACAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCCATAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp TCCTTGGTCTCCCTTTCAGATGTTGCTCTTCAAAATAGAAGGGGAGTAGATTTGCAACAGAGGATGATGTaGCCAAATTCTGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: SLVSLSDVALQNRRGVDLQQRMM*PNSECM
Trigger: CATGCACTCAGAATTTGGTCACATCATCCTCTGTTG...CAAATCTACTCCCCTTCTATTTTGAAGAGCAACATCTGAAAGGGAGACCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp CCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATCCCCAGAGTATCTTCATaGGACAAAAATACCATAATT +
Preference number: 4 (lower is better)
Translates to: PDHAKGKLKLELATLGGIPRVSS*DKNTII
Trigger: AATTATGGTATTTTTGTCCCATGAAGATACTCTGGG...GATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp GAGGCTATTAGCCAAGATATAGAGAATATAAAAAGGGGCCTAGATGGTCTTACTAACATCAGGGAAAGGTaGGTATGTTCCCAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: EAISQDIENIKRGLDGLTNIRER*VCSQPD
Trigger: GTCTGGCTGGGAACATACCCACCTTTCCCTGATGTT...AGTAAGACCATCTAGGCCCCTTTTTATATTCTCTATATCTTGGCTAATAGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
3UTR CAA 72 bp TCATTTCTGCTATCTTGGCAAAGACCTTCATTGTGGTaGTGGCTTTCAAAGCCATCAAACCAGGAAGCATCT +
Preference number: 4 (lower is better)
Translates to: SFLLSWQRPSLW*WLSKPSNQEAS
Trigger: AGATGCTTCCTGGTTTGATGGCTTTGAAAGCCACAACCACAATGAAGGTCTTTGCCAAGATAGCAGAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CAA 72 bp CCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATaGTGGTTGTGGCTTTCAAAGCCATCAAACCAGGAA +
Preference number: 4 (lower is better)
Translates to: PLSFLLSWQRPS*WLWLSKPSNQE
Trigger: TTCCTGGTTTGATGGCTTTGAAAGCCACAACCACAATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CAA 72 bp CAGAGGAATCAGTGTCTCCCTAAAATTATGGTATTTTaGGCCCATGAAGATCCACTGGGAACTGTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: QRNQCLPKIMVF*AHEDPLGTVLV
Trigger: GACAAGAACAGTTCCCAGTGGATCTTCATGGGCCAAAAATACCATAATTTTAGGGAGACACTGATTCCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp GCCAATTCGGCATGTAGGGCTGCCCTGAGAGGTAAAATCAATAGTTTAGATATAGCTGATAATGTCTGGTaGGATCCACATGAACAACAT +
Preference number: 4 (lower is better)
Translates to: ANSACRAALRGKINSLDIADNVW*DPHEQH
Trigger: ATGTTGTTCATGTGGATCTCACCAGACATTATCAGC...TATATCTAAACTATTGATTTTACCTCTCAGGGCAGCCCTACATGCCGAATTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGAGCCCAGGGACATATTaGATAAAATATGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVSPGTY*IKYVGP
Trigger: AGGACCCACATATTTTATTCAATATGTCCCTGGGCT...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp ACTGGCAGAGGCTTAGCTATGTCAGAATACACTTTAAAGGCACTTATAATAAAAAGTCTCCTTCCACTCTaGGTGACAGCTCCTCATGGA +
Preference number: 4 (lower is better)
Translates to: TGRGLAMSEYTLKALIIKSLLPL*VTAPHG
Trigger: TCCATGAGGAGCTGTCACTCAGAGTGGAAGGAGACT...TTTTATTATAAGTGCCTTTAAAGTGTATTCTGACATAGCTAAGCCTCTGCCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR TCA 90 bp TTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATTGTGGTTGTGGCTTTCAACAGAGGATGATGTaGCCAAATTCTGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: FHCHFCYLGKDLHCGCGFQQRMM*PNSECM
Trigger: CATGCACTCAGAATTTGGTCACATCATCCTCTGTTG...AAAGCCACAACCACAATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp GAGGCTATTAGCCAAGATATAGAGAATATAAAAAGGGGCCTAGATGGTCTTACTAGCTACGTTGTGCACTaGAAACTGGTAAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: EAISQDIENIKRGLDGLTSYVVH*KLVRRL
Trigger: CAGTCTCCTTACCAGTTTCCAGTGCACAACGTAGCT...AGTAAGACCATCTAGGCCCCTTTTTATATTCTCTATATCTTGGCTAATAGCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR CCA 90 bp TCCTTGGTCTCCCTTTCAGATGTTGCTCTTCAAAATAGAAGGGGAGTAGATTTGAATAGAAGGCAAGAGTaGACCCCTCATTACAACAGA +
Preference number: 4 (lower is better)
Translates to: SLVSLSDVALQNRRGVDLNRRQE*TPHYNR
Trigger: TCTGTTGTAATGAGGGGTCCACTCTTGCCTTCTATT...CAAATCTACTCCCCTTCTATTTTGAAGAGCAACATCTGAAAGGGAGACCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
3UTR CAA 72 bp TCAGATGTTGCTCTTCAAAATAGAAGGGGAGTAGATTaGCCCTTTCTACAACAAGGAGGCTTATATGCTGCA +
Preference number: 4 (lower is better)
Translates to: SDVALQNRRGVD*PFLQQGGLYAA
Trigger: TGCAGCATATAAGCCTCCTTGTTGTAGAAAGGGCAAATCTACTCCCCTTCTATTTTGAAGAGCAACATCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CAA 72 bp ATCCTGAGGATATCCAACACATCAGTGGATAGTCTCTaGAGAGAGCAAACATCCTTCATAGAAAGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: ILRISNTSVDSL*REQTSFIESAV
Trigger: AACAGCACTTTCTATGAAGGATGTTTGCTCTCTCAAGAGACTATCCACTGATGTGTTGGATATCCTCAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CAA 72 bp TCTGTGGAGAATCTCCATTTGTCAGAATTCACCAGCTaGCTTCTAATATGCAATATAGCCTGCTATACCTGG +
Preference number: 4 (lower is better)
Translates to: SVENLHLSEFTS*LLICNIACYTW
Trigger: CCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAATTCTGACAAATGGAGATTCTCCACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACTACACTTTTATCAAGTaGGTCTCCTTCCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYYTFIK*VSFHSE
Trigger: CTCAGAGTGGAAGGAGACTCACTTGATAAAAGTGTA...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR TCA 90 bp AAATCCTTGTTTTCTAGAGCCAGTTTCTCTCTTGAAGCCTTGAACCATTATGTTGCAGATAAAGGAGACTaGTTGTGGTGTTCACCCCAA +
Preference number: 4 (lower is better)
Translates to: KSLFSRASFSLEALNHYVADKGD*LWCSPQ
Trigger: TTGGGGTGAACACCACAATCAGTCTCCTTTATCTGC...AACATAATGGTTCAAGGCTTCAAGAGAGAAACTGGCTCTAGAAAACAAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTGTTTATTCGGATACTaGTCTTCAGGACACTTGATA +
Preference number: 4 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSCLFGY*SSGHLI
Trigger: TATCAAGTGTCCTGAAGATCAGTATCCGAATAAACA...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp TTCCATTGTCATTTCTGCTATCTTGGCAAAGACCTTCATTGTGGTTGTGGCTTTGAGCTTCTCCCAAGTTaGCTGTTTTGTAAGAATGGA +
Preference number: 4 (lower is better)
Translates to: FHCHFCYLGKDLHCGCGFELLPS*LFCKNG
Trigger: TCCATTCTTACAAAACAGCCAACTTGGGAGAAGCTC...AAAGCCACAACCACAATGAAGGTCTTTGCCAAGATAGCAGAAATGACAATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGAGCCCAGGGACATATTaGATAAAATATGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLSPGTY*IKYVGP
Trigger: AGGACCCACATATTTTATTCAATATGTCCCTGGGCT...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGCAAAAGGAGCATAGCTaGTCTGTGGAATGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLQKEHS*SVECCR
Trigger: TCTACAACATTCCACAGATCAGCTATGCTCCTTTTG...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR TCA 90 bp TCCTTGGTCTCCCTTTCAGATGTTGCTCTTCAAAATAGAAGGGGAGTAGATTTGATTGACTTAGTTCCCTaGCTCCATCCTTATCAAAAT +
Preference number: 4 (lower is better)
Translates to: SLVSLSDVALQNRRGVDLIDLVP*LHPYQN
Trigger: ATTTTGATAAGGATGGAGTCAGGGAACTAAGTCAAT...CAAATCTACTCCCCTTCTATTTTGAAGAGCAACATCTGAAAGGGAGACCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR TCA 90 bp TTTGGCATGTTCCACAGGCCTTACACGGTACATTACTATACAAGATTTTATAAAGCAGATAAAGGAGACTaGTTGTGGTGTTCACCCCAA +
Preference number: 4 (lower is better)
Translates to: FGMFHRPYTVHYYTRFYKADKGD*LWCSPQ
Trigger: TTGGGGTGAACACCACAATCAGTCTCCTTTATCTGC...TTTATAAAATCTTGTATAGTAATGTACCGTGTAAGGCCTGTGGAACATGCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGCCAAGTGGACAACTTTaGCTACAAGCAGATAAAGGA +
Preference number: 4 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLPSGQL*LQADKG
Trigger: TCCTTTATCTGCTTGTAGTCAAAGTTGTCCACTTGG...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp GAGGCTATTAGCCAAGATATAGAGAATATAAAAAGGGGCCTAGATGGTCTTACTCTCGGGAGATCTGAGTaGATATTGATGTTGAAATGC +
Preference number: 4 (lower is better)
Translates to: EAISQDIENIKRGLDGLTLGRSE*ILMLKC
Trigger: GCATTTCAACATCAATATCCACTCAGATCTCCCGAG...AGTAAGACCATCTAGGCCCCTTTTTATATTCTCTATATCTTGGCTAATAGCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp TGGCCCTTGCCAGAGATTTGCAATAACACGTTTCAAGTAAATAAAAATAGGTATAGCTACGTTGTGCACTaGAAACTGGTAAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: WPLPEICNNTFQVNKNRYSYVVH*KLVRRL
Trigger: CAGTCTCCTTACCAGTTTCCAGTGCACAACGTAGCT...ATACCTATTTTTATTTACTTGAAACGTGTTATTGCAAATCTCTGGCAAGGGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR CCA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGGAGCTTCTCCCAAGTTaGCTGTTTTGTAAGAATGGA +
Preference number: 4 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLELLPS*LFCKNG
Trigger: TCCATTCTTACAAAACAGCCAACTTGGGAGAAGCTC...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CAA 72 bp AATAAAGGGGTAGGATGTCACAGTAGGCAAAGCACATaGAAGTTAGCTGACACAAAACAAAGGAATGACTTC +
Preference number: 4 (lower is better)
Translates to: NKGVGCHSRQST*KLADTKQRNDF
Trigger: GAAGTCATTCCTTTGTTTTGTGTCAGCTAACTTCAATGTGCTTTGCCTACTGTGACATCCTACCCCTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp ATCATGTATCCTAAACCATGTGGGCTTTCAGATATCTTCTCTTATATAGCTAAGGATGTGACCAAATTCTaGGTGCATGTCAACATCAGG +
Preference number: 4 (lower is better)
Translates to: IMYPKPCGLSDIFSYIAKDVTKF*VHVNIR
Trigger: CCTGATGTTGACATGCACTCAGAATTTGGTCACATC...CTTAGCTATATAAGAGAAGATATCTGAAAGCCCACATGGTTTAGGATACATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp ACTGGCAGAGGCTTAGCTATGTCAGAATACACTTTAAAGGCACTTATAATAAAAGATGTGACCAAATTCTaGGTGCATGTCAACATCAGG +
Preference number: 4 (lower is better)
Translates to: TGRGLAMSEYTLKALIIKDVTKF*VHVNIR
Trigger: CCTGATGTTGACATGCACTCAGAATTTGGTCACATC...TTTTATTATAAGTGCCTTTAAAGTGTATTCTGACATAGCTAAGCCTCTGCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp ATACATTTTTCCAAACAGTGGCATCTGCAACTTAATCACTTTTCCCTGTTATCCCTCGGGAGATCTGAGTaGATATTGATGTTGAAATGC +
Preference number: 4 (lower is better)
Translates to: IHFSKQWHLQLNHFSLLSLGRSE*ILMLKC
Trigger: GCATTTCAACATCAATATCCACTCAGATCTCCCGAG...GGATAACAGGGAAAAGTGATTAAGTTGCAGATGCCACTGTTTGGAAAAATGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp TGGCCCTTGCCAGAGATTTGCAATAACACGTTTCAAGTAAATAAAAATAGGTATTGCAATCTCTCCATCTaGACATGGGGCACAATCAAA +
Preference number: 4 (lower is better)
Translates to: WPLPEICNNTFQVNKNRYCNLSI*TWGTIK
Trigger: TTTGATTGTGCCCCATGTCCAGATGGAGAGATTGCA...ATACCTATTTTTATTTACTTGAAACGTGTTATTGCAAATCTCTGGCAAGGGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGCCCAGAGTATCTTCATaGGACAAAAATACCATAATT +
Preference number: 4 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVPRVSS*DKNTII
Trigger: AATTATGGTATTTTTGTCCCATGAAGATACTCTGGG...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp TCCTTGGTCTCCCTTTCAGATGTTGCTCTTCAAAATAGAAGGGGAGTAGATTTGCCCAGAGTATCTTCATaGGACAAAAATACCATAATT +
Preference number: 4 (lower is better)
Translates to: SLVSLSDVALQNRRGVDLPRVSS*DKNTII
Trigger: AATTATGGTATTTTTGTCCCATGAAGATACTCTGGG...CAAATCTACTCCCCTTCTATTTTGAAGAGCAACATCTGAAAGGGAGACCAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CAA 72 bp ACTTGGAAGTCAGAGTTCGTGGACAGAGGAGAAAATTaGGCTGCAAATAATAGAAAGAATCCTACTAGTAAG +
Preference number: 4 (lower is better)
Translates to: TWKSEFVDRGEN*AANNRKNPTSK
Trigger: CTTACTAGTAGGATTCTTTCTATTATTTGCAGCCAAATTTTCTCCTCTGTCCACGAACTCTGACTTCCAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCCAAAAGGAGCATAGCTaGTCTGTGGAATGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LFICYRETPIVRANNRNLQKEHS*SVECCR
Trigger: TCTACAACATTCCACAGATCAGCTATGCTCCTTTTG...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR TCA 90 bp TTTGGCATGTTCCACAGGCCTTACACGGTACATTACTATACAAGATTTTATAAATTCTGTTATTTGCTCTaGCAATGGATGTGTCCCGAT +
Preference number: 4 (lower is better)
Translates to: FGMFHRPYTVHYYTRFYKFCYLL*QWMCPD
Trigger: ATCGGGACACATCCATTGTCAGAGCAAATAACAGAA...TTTATAAAATCTTGTATAGTAATGTACCGTGTAAGGCCTGTGGAACATGCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp AAATCCTTGTTTTCTAGAGCCAGTTTCTCTCTTGAAGCCTTGAACCATTATGTTGGACACTTGATACATTaGTCCATATCTGATTGTGGT +
Preference number: 4 (lower is better)
Translates to: KSLFSRASFSLEALNHYVGHLIH*SISDCG
Trigger: ACCACAATCAGATATGGATCAATGTATCAAGTGTCC...AACATAATGGTTCAAGGCTTCAAGAGAGAAACTGGCTCTAGAAAACAAGGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
CDS-3UTR CCA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCGAGCTTCTCCCAAGTTaGCTGTTTTGTAAGAATGGA +
Preference number: 4 (lower is better)
Translates to: LFICYRETPIVRANNRNLELLPS*LFCKNG
Trigger: TCCATTCTTACAAAACAGCCAACTTGGGAGAAGCTC...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
3UTR CAA 72 bp TTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTaGGCTGTTCTTATAAGTATCTGTGGAGAATCTCCA +
Preference number: 4 (lower is better)
Translates to: FLGLDKFLYECN*AVLISICGESP
Trigger: TGGAGATTCTCCACAGATACTTATAAGAACAGCCAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR TCA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCTTGTTTTTGCCTCATTaGAACTGTCAGGTAACCTTC +
Preference number: 4 (lower is better)
Translates to: LFICYRETPIVRANNRNLLFLPH*NCQVTF
Trigger: GAAGGTTACCTGACAGTTTCAATGAGGCAAAAACAA...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR CCA 90 bp TGGCCCTTGCCAGAGATTTGCAATAACACGTTTCAAGTAAATAAAAATAGGTATTTTTGTAAGAATGGATaGAGCTTCCATGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: WPLPEICNNTFQVNKNRYFCKNG*SFHGKG
Trigger: TCCTTTGCCATGGAAGCTCCATCCATTCTTACAAAA...ATACCTATTTTTATTTACTTGAAACGTGTTATTGCAAATCTCTGGCAAGGGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR TCA 90 bp TTTGGCATGTTCCACAGGCCTTACACGGTACATTACTATACAAGATTTTATAAACTAATCAGAAAATCATaGGTGTCACCAAATGCAACA +
Preference number: 4 (lower is better)
Translates to: FGMFHRPYTVHYYTRFYKLIRKS*VSPNAT
Trigger: TGTTGCATTTGGTGACACTCATGATTTTCTGATTAG...TTTATAAAATCTTGTATAGTAATGTACCGTGTAAGGCCTGTGGAACATGCCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR TCA 90 bp TTTGGCATGTTCCACAGGCCTTACACGGTACATTACTATACAAGATTTTATAAAATTGACTTAGTTCCCTaGCTCCATCCTTATCAAAAT +
Preference number: 4 (lower is better)
Translates to: FGMFHRPYTVHYYTRFYKIDLVP*LHPYQN
Trigger: ATTTTGATAAGGATGGAGTCAGGGAACTAAGTCAAT...TTTATAAAATCTTGTATAGTAATGTACCGTGTAAGGCCTGTGGAACATGCCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR TCA 90 bp TTTGGCATGTTCCACAGGCCTTACACGGTACATTACTATACAAGATTTTATAAATGTTTATTCGGATACTaGTCTTCAGGACACTTGATA +
Preference number: 4 (lower is better)
Translates to: FGMFHRPYTVHYYTRFYKCLFGY*SSGHLI
Trigger: TATCAAGTGTCCTGAAGATCAGTATCCGAATAAACA...TTTATAAAATCTTGTATAGTAATGTACCGTGTAAGGCCTGTGGAACATGCCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR GCA 90 bp TTTGGCATGTTCCACAGGCCTTACACGGTACATTACTATACAAGATTTTATAAAGAGATTTCTGTTATTTaGTCTGACAATGGATGTGTC +
Preference number: 4 (lower is better)
Translates to: FGMFHRPYTVHYYTRFYKEISVI*SDNGCV
Trigger: GACACATCCATTGTCAGAGCAAATAACAGAAATCTC...TTTATAAAATCTTGTATAGTAATGTACCGTGTAAGGCCTGTGGAACATGCCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR GCA 90 bp TTATTTATCTGCTATCGAGAAACACCCATTGTCAGAGCAAATAACAGAAATCTCGAATGTGATTGTTTTTaGCTCATTGAAACTGTCAGG +
Preference number: 4 (lower is better)
Translates to: LFICYRETPIVRANNRNLECDCF*LIETVR
Trigger: CCTGACAGTTTCAATGAGGCAAAAACAATCACATTC...GAGATTTCTGTTATTTGCTCTGACAATGGGTGTTTCTCGATAGCAGATAAATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
3UTR CAA 72 bp GTATCTATATTAGAAGGTTTAGCAGGAGAAGGCTACTaGATACCCAATGAATGGAATAAAGTTGTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: VSILEGLAGEGY*IPNEWNKVVQS
Trigger: AGACTGAACAACTTTATTCCATTCATTGGGTATCAAGTAGCCTTCTCCTGCTAAACCTTCTAATATAGATAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR CAA 90 bp CTTGCAGTCCTTCTTGGCCTGGGTGCTGCTGGGACCGGGACCAGAATTGCAGCCGTTGCTGAAACTTCCTaGTTCACAACGTTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: LAVLLGLGAAGTGTRIAAVAETS*FTTFFS
Trigger: TGAGAAGAACGTTGTGAACAAGGAAGTTTCAGCAAC...GGCTGCAATTCTGGTCCCGGTCCCAGCAGCACCCAGGCCAAGAAGGACTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR CAA 90 bp GCTTGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTCCTGGTTTGATGGCTTaGAAGGCTACAACCACAATA +
Preference number: 5 (lower is better)
Translates to: AWCTVPAAGALTTPLTKIPGLMA*KATTTI
Trigger: TATTGTGGTTGTAGCCTTCAAAGCCATCAAACCAGG...AATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR CAA 90 bp GCTTGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTATTGTTTTTGCCTCATaGAAACTGTCAGGTAACCTT +
Preference number: 5 (lower is better)
Translates to: AWCTVPAAGALTTPLTKIIVFAS*KLSGNL
Trigger: AAGGTTACCTGACAGTTTCAATGAGGCAAAAACAAT...AATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR CAA 90 bp TGGTGCACTGTCCCTGCTGCAGGGGCACTAACTACGCCCCTAACCAAGATTATAAGATCTGAGTGGATATaGATGTTGAAATGCCTCCTA +
Preference number: 5 (lower is better)
Translates to: WCTVPAAGALTTPLTKIIRSEWI*MLKCLL
Trigger: TAGGAGGCATTTCAACATCAATATCCACTCAGATCT...TATAATCTTGGTTAGGGGCGTAGTTAGTGCCCCTGCAGCAGGGACAGTGCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR CAA 90 bp CCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCAACATTGGGAGGAATCAATCTGCTTCCTGGTTaGATGGCTTTGAAGGCTACA +
Preference number: 5 (lower is better)
Translates to: PDHAKGKLKLELATLGGINLLPG*MALKAT
Trigger: TGTAGCCTTCAAAGCCATCAAACCAGGAAGCAGATT...GATTCCTCCCAATGTTGCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS TCA 90 bp GTCGTGTGCTTAGGCTGCCATTTGGCTCACATTGACTTAGTTCCCTaGCTCCATCCTTATCAAAATATGGGCATTCAAATAAGATGGACC +
Preference number: 5 (lower is better)
Translates to: VVCLGCHLAHIDLVP*LHPYQNMGIQIRWT
Trigger: GGTCCATCTTATTTGAATGCCCATATTTTGATAAGGATGGAGTCAGGGAACTAAGTCAATGTGAGCCAAATGGCAGCCTAAGCACACGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS CCA 90 bp CAAGCTTGGTTGCTGAAACTTCCTTGTTCACAACGTTCTTCTCATTaGAGCTTCTCCCAAGTTGGCTGTTTTGTAAGAATGGATGGAGCT +
Preference number: 5 (lower is better)
Translates to: QAWLLKLPCSQRSSH*SFSQVGCFVRMDGA
Trigger: AGCTCCATCCATTCTTACAAAACAGCCAACTTGGGAGAAGCTCCAATGAGAAGAACGTTGTGAACAAGGAAGTTTCAGCAACCAAGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR CAA 90 bp ACCCTATGGGTGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTGTGTCTGAGTGGATATTGATGTaGAAATGCCTCCTATTACTG +
Preference number: 5 (lower is better)
Translates to: TLWVEQQYELTSTPRAVSEWILM*KCLLLL
Trigger: CAGTAATAGGAGGCATTTCAACATCAATATCCACTC...AGACACAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCCATAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS CCA 90 bp GGAGCTGTGGAATGTTGTAGAGACTTAAAACTCGGGAGATCTGAGTaGATATTGATGTTGAAATGCCTCCTATTACTGCAACCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: GAVECCRDLKLGRSE*ILMLKCLLLLQPAC
Trigger: ACAAGCTGGTTGCAGTAATAGGAGGCATTTCAACATCAATATCCACTCAGATCTCCCGAGTTTTAAGTCTCTACAACATTCCACAGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233759.2
CDS-3UTR CAA 90 bp GTTTGTTGGCTTCAAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCAAGCCCAGGGACATATaGAATAAAATATGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: VCWLQGFSRILEHWQRLSKPRDI*NKICGS
Trigger: GGACCCACATATTTTATTCAATATGTCCCTGGGCTT...GCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTTGAAGCCAACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS TCA 90 bp GCAGAAAATTCTGTAACCTTTTCTGCAAATGCTACACAAAGTCCATaGTTTGTCATCTCCTCTGTGATGTCCCTAAGGAAGAGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: AENSVTFSANATQSP*FVISSVMSLRKSSP
Trigger: GGGAGAACTCTTCCTTAGGGACATCACAGAGGAGATGACAAATCATGGACTTTGTGTAGCATTTGCAGAAAAGGTTACAGAATTTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR CAA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGAAGCCCAGGGACATATaGAATAAAATATGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVKPRDI*NKICGS
Trigger: GGACCCACATATTTTATTCAATATGTCCCTGGGCTT...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR CAA 90 bp GCCAATTCGGCATGTAGGGCTGCCCTGAGAGGTAAAATCAATAGTTTAGATATAAAGCCCAGGGACATATaGAATAAAATATGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: ANSACRAALRGKINSLDIKPRDI*NKICGS
Trigger: GGACCCACATATTTTATTCAATATGTCCCTGGGCTT...TATATCTAAACTATTGATTTTACCTCTCAGGGCAGCCCTACATGCCGAATTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR CAA 90 bp AAGGATTTTCTAGGATATTGGAACACTGGCAGAGGCTTAGCTATGTCAGAATACTGCTTAGGCTGCCATTaGGCTCACATTGACTTAGTT +
Preference number: 5 (lower is better)
Translates to: KDFLGYWNTGRGLAMSEYCLGCH*AHIDLV
Trigger: AACTAAGTCAATGTGAGCCAAATGGCAGCCTAAGCA...GTATTCTGACATAGCTAAGCCTCTGCCAGTGTTCCAATATCCTAGAAAATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR CAA 90 bp GTTTTAAACATGATTACCAGATCATGCCAAGGGCAAACTCAAGTTGGAGCTTGCGTTGCTGAAACTTCCTaGTTCACAACGTTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: VLNMITRSCQGQTQVGACVAETS*FTTFFS
Trigger: TGAGAAGAACGTTGTGAACAAGGAAGTTTCAGCAAC...GCAAGCTCCAACTTGAGTTTGCCCTTGGCATGATCTGGTAATCATGTTTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR CAA 90 bp TCCTTGGTCTCCCTTTCAGATGTTGCTCTTCAAAATAGAAGGGGAGTAGATTTGAGATCTGAGTGGATATaGATGTTGAAATGCCTCCTA +
Preference number: 5 (lower is better)
Translates to: SLVSLSDVALQNRRGVDLRSEWI*MLKCLL
Trigger: TAGGAGGCATTTCAACATCAATATCCACTCAGATCT...CAAATCTACTCCCCTTCTATTTTGAAGAGCAACATCTGAAAGGGAGACCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR CAA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGAGATCTGAGTGGATATaGATGTTGAAATGCCTCCTA +
Preference number: 5 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVRSEWI*MLKCLL
Trigger: TAGGAGGCATTTCAACATCAATATCCACTCAGATCT...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS TCA 90 bp GACACTGATTCCTCTGTTTATTCGGATACTGATCTTCAGGACACTTaGTACATTGATCCATATCTGATTGTGGTGTTCACCCCAAGTTAT +
Preference number: 5 (lower is better)
Translates to: DTDSSVYSDTDLQDT*YIDPYLIVVFTPSY
Trigger: ATAACTTGGGGTGAACACCACAATCAGATATGGATCAATGTATCAAGTGTCCTGAAGATCAGTATCCGAATAAACAGAGGAATCAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232985.2
CDS-3UTR CAA 90 bp AAATCCTTGTTTTCTAGAGCCAGTTTCTCTCTTGAAGCCTTGAACCATTATGTTAATCTGCTTCCTGGTTaGATGGCTTTGAAGGCTACA +
Preference number: 5 (lower is better)
Translates to: KSLFSRASFSLEALNHYVNLLPG*MALKAT
Trigger: TGTAGCCTTCAAAGCCATCAAACCAGGAAGCAGATT...AACATAATGGTTCAAGGCTTCAAGAGAGAAACTGGCTCTAGAAAACAAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR CAA 90 bp ATTCACCAGCTTGCTTCTAATATGCAATATAGCCTGCTATACCTGGCTGTAGTGATTGTTTTTGCCTCATaGAAACTGTCAGGTAACCTT +
Preference number: 5 (lower is better)
Translates to: IHQLASNMQYSLLYLAVVIVFAS*KLSGNL
Trigger: AAGGTTACCTGACAGTTTCAATGAGGCAAAAACAAT...CACTACAGCCAGGTATAGCAGGCTATATTGCATATTAGAAGCAAGCTGGTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS TCA 90 bp GACACTGATTCCTCTGTTTATTCGGATACTGATCTTCAGGACACTTaGTACATTGATCCATATCTGTTTCATTTGCAATCTCTCCATCTG +
Preference number: 5 (lower is better)
Translates to: DTDSSVYSDTDLQDT*YIDPYLFHLQSLHL
Trigger: CAGATGGAGAGATTGCAAATGAAACAGATATGGATCAATGTATCAAGTGTCCTGAAGATCAGTATCCGAATAAACAGAGGAATCAGTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS GCA 90 bp CTGATCTTCAGGACACTTGATACATTGATCCATATCTGTTTCATTTaGAATCTCTCCATCTGGACATGGGGCACAATCAAAACAACAAAA +
Preference number: 5 (lower is better)
Translates to: LIFRTLDTLIHICFI*NLSIWTWGTIKTTK
Trigger: TTTTGTTGTTTTGATTGTGCCCCATGTCCAGATGGAGAGATTGCAAATGAAACAGATATGGATCAATGTATCAAGTGTCCTGAAGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS CCA 90 bp ACATTGATCCATATCTGTTTCATTTGCAATCTCTCCATCTGGACATaGGGCACAATCAAAACAACAAAATGGTTTCCCTTCAACAGATGT +
Preference number: 5 (lower is better)
Translates to: TLIHICFICNLSIWT*GTIKTTKWFPFNRC
Trigger: ACATCTGTTGAAGGGAAACCATTTTGTTGTTTTGATTGTGCCCCATGTCCAGATGGAGAGATTGCAAATGAAACAGATATGGATCAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR CAA 90 bp CCACAACCCCATTATTTCCTAGGCCTTGATAAATTCTTGTATGAGTGTAACTTGGAGTGGATATTGATGTaGAAATGCCTCCTATTACTG +
Preference number: 5 (lower is better)
Translates to: PQPHYFLGLDKFLYECNLEWILM*KCLLLL
Trigger: CAGTAATAGGAGGCATTTCAACATCAATATCCACTC...CAAGTTACACTCATACAAGAATTTATCAAGGCCTAGGAAATAATGGGGTTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS-3UTR CAA 90 bp ACTGGCAGAGGCTTAGCTATGTCAGAATACACTTTAAAGGCACTTATAATAAAATGCTTAGGCTGCCATTaGGCTCACATTGACTTAGTT +
Preference number: 5 (lower is better)
Translates to: TGRGLAMSEYTLKALIIKCLGCH*AHIDLV
Trigger: AACTAAGTCAATGTGAGCCAAATGGCAGCCTAAGCA...TTTTATTATAAGTGCCTTTAAAGTGTATTCTGACATAGCTAAGCCTCTGCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS-3UTR CAA 90 bp ATCATGTATCCTAAACCATGTGGGCTTTCAGATATCTTCTCTTATATAGCTAAGCCTGGTTTGATGGCTTaGAAGGCTACAACCACAATA +
Preference number: 5 (lower is better)
Translates to: IMYPKPCGLSDIFSYIAKPGLMA*KATTTI
Trigger: TATTGTGGTTGTAGCCTTCAAAGCCATCAAACCAGG...CTTAGCTATATAAGAGAAGATATCTGAAAGCCCACATGGTTTAGGATACATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS-3UTR CAA 90 bp TTTGGCATGTTCCACAGGCCTTACACGGTACATTACTATACAAGATTTTATAAAGTTGCTGAAACTTCCTaGTTCACAACGTTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: FGMFHRPYTVHYYTRFYKVAETS*FTTFFS
Trigger: TGAGAAGAACGTTGTGAACAAGGAAGTTTCAGCAAC...TTTATAAAATCTTGTATAGTAATGTACCGTGTAAGGCCTGTGGAACATGCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS TCA 72 bp GGAGTACACTTTTATCAAGTGAGTCTCCTTCCACTCTaGGTGACAGCTCCTCATGGAGTGCCTGGGCAATGG +
Preference number: 6 (lower is better)
Translates to: GVHFYQVSLLPL*VTAPHGVPGQW
Trigger: CCATTGCCCAGGCACTCCATGAGGAGCTGTCACTCAGAGTGGAAGGAGACTCACTTGATAAAAGTGTACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS GCA 72 bp GTGAGGTATTCATATCCCAAGCATGCAGAGGTCGTGTaGTTAGGCTGCCATTTGGCTCACATTGACTTAGTT +
Preference number: 6 (lower is better)
Translates to: VRYSYPKHAEVV*LGCHLAHIDLV
Trigger: AACTAAGTCAATGTGAGCCAAATGGCAGCCTAAGCACACGACCTCTGCATGCTTGGGATATGAATACCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS CCA 72 bp TTGAATAATTCCCTGATACAGAGCTACGTTGTGCACTaGAAACTGGTAAGGAGACTGGAGCTGGACACTGGT +
Preference number: 6 (lower is better)
Translates to: LNNSLIQSYVVH*KLVRRLELDTG
Trigger: ACCAGTGTCCAGCTCCAGTCTCCTTACCAGTTTCCAGTGCACAACGTAGCTCTGTATCAGGGAATTATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS CAA 90 bp TCAAGCTTGGTTGCTGAAACTTCCTTGTTCACAACGTTCTTCTCATaGGAGCTTCTCCCAAGTTGGCTGTTTTGTAAGAATGGATGGAGC +
Preference number: 6 (lower is better)
Translates to: SSLVAETSLFTTFFS*ELLPSWLFCKNGWS
Trigger: GCTCCATCCATTCTTACAAAACAGCCAACTTGGGAGAAGCTCCAATGAGAAGAACGTTGTGAACAAGGAAGTTTCAGCAACCAAGCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS CCA 72 bp TTCACAACGTTCTTCTCATTGGAGCTTCTCCCAAGTTaGCTGTTTTGTAAGAATGGATGGAGCTGTGGAATG +
Preference number: 6 (lower is better)
Translates to: FTTFFSLELLPS*LFCKNGWSCGM
Trigger: CATTCCACAGCTCCATCCATTCTTACAAAACAGCCAACTTGGGAGAAGCTCCAATGAGAAGAACGTTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233759.2
CDS GCA 72 bp AAACTCGGGAGATCTGAGTGGATATTGATGTTGAAATaGCTCCTATTACTGCAACCAGCTTGTCAGTCTTCT +
Preference number: 6 (lower is better)
Translates to: KLGRSEWILMLK*LLLLQPACQSS
Trigger: AGAAGACTGACAAGCTGGTTGCAGTAATAGGAGGCATTTCAACATCAATATCCACTCAGATCTCCCGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS TCA 72 bp TCTGTAACCTTTTCTGCAAATGCTACACAAAGTCCATaGTTTGTCATCTCCTCTGTGATGTCCCTAAGGAAG +
Preference number: 6 (lower is better)
Translates to: SVTFSANATQSP*FVISSVMSLRK
Trigger: CTTCCTTAGGGACATCACAGAGGAGATGACAAATCATGGACTTTGTGTAGCATTTGCAGAAAAGGTTACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS TCA 72 bp ATAAAGGAGACTGATTGTGGTGTTCACCCCAAGTTATaGGCTTGTCATTTAGGGAAAGATGCTGAACACTGT +
Preference number: 6 (lower is better)
Translates to: IKETDCGVHPKL*ACHLGKDAEHC
Trigger: ACAGTGTTCAGCATCTTTCCCTAAATGACAAGCTCATAACTTGGGGTGAACACCACAATCAGTCTCCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS CCA 72 bp TTGCTGAAACTTCCTTGTTCACAACGTTCTTCTCATTaGAGCTTCTCCCAAGTTGGCTGTTTTGTAAGAATG +
Preference number: 6 (lower is better)
Translates to: LLKLPCSQRSSH*SFSQVGCFVRM
Trigger: CATTCTTACAAAACAGCCAACTTGGGAGAAGCTCCAATGAGAAGAACGTTGTGAACAAGGAAGTTTCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS CAA 72 bp TGTAGAGACTTAAAACTCGGGAGATCTGAGTGGATATaGATGTTGAAATGCCTCCTATTACTGCAACCAGCT +
Preference number: 6 (lower is better)
Translates to: CRDLKLGRSEWI*MLKCLLLLQPA
Trigger: AGCTGGTTGCAGTAATAGGAGGCATTTCAACATCAATATCCACTCAGATCTCCCGAGTTTTAAGTCTCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS CAA 72 bp GTTGCTGAAACTTCCTTGTTCACAACGTTCTTCTCATaGGAGCTTCTCCCAAGTTGGCTGTTTTGTAAGAAT +
Preference number: 6 (lower is better)
Translates to: VAETSLFTTFFS*ELLPSWLFCKN
Trigger: ATTCTTACAAAACAGCCAACTTGGGAGAAGCTCCAATGAGAAGAACGTTGTGAACAAGGAAGTTTCAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS TCA 72 bp TTAGGCTGCCATTTGGCTCACATTGACTTAGTTCCCTaGCTCCATCCTTATCAAAATATGGGCATTCAAATA +
Preference number: 6 (lower is better)
Translates to: LGCHLAHIDLVP*LHPYQNMGIQI
Trigger: TATTTGAATGCCCATATTTTGATAAGGATGGAGTCAGGGAACTAAGTCAATGTGAGCCAAATGGCAGCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS CCA 72 bp CATATCTGTTTCATTTGCAATCTCTCCATCTGGACATaGGGCACAATCAAAACAACAAAATGGTTTCCCTTC +
Preference number: 6 (lower is better)
Translates to: HICFICNLSIWT*GTIKTTKWFPF
Trigger: GAAGGGAAACCATTTTGTTGTTTTGATTGTGCCCCATGTCCAGATGGAGAGATTGCAAATGAAACAGATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2
CDS CAA 90 bp GGACCACACATCCTGGATAAAGATATCATGAGGGTATTTTCTAGGTaGAACACTTCTGAGAAAATCCTTGAATCCCAGAATTTCATCCAT +
Preference number: 6 (lower is better)
Translates to: GPHILDKDIMRVFSR*NTSEKILESQNFIH
Trigger: ATGGATGAAATTCTGGGATTCAAGGATTTTCTCAGAAGTGTTCAACCTAGAAAATACCCTCATGATATCTTTATCCAGGATGTGTGGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS TCA 72 bp CAAAAACAATTGCCAAAATGTGCTGATAATGTCTGGTaGGATCCACATGAACAACATCCAGTGTATCCGTTT +
Preference number: 6 (lower is better)
Translates to: QKQLPKCADNVW*DPHEQHPVYPF
Trigger: AAACGGATACACTGGATGTTGTTCATGTGGATCTCACCAGACATTATCAGCACATTTTGGCAATTGTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS CCA 72 bp GAATGTTGTAGAGACTTAAAACTCGGGAGATCTGAGTaGATATTGATGTTGAAATGCCTCCTATTACTGCAA +
Preference number: 6 (lower is better)
Translates to: ECCRDLKLGRSE*ILMLKCLLLLQ
Trigger: TTGCAGTAATAGGAGGCATTTCAACATCAATATCCACTCAGATCTCCCGAGTTTTAAGTCTCTACAACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
ENSMUST00000233759.2
CDS GCA 72 bp ATAGACACTAATCAGAAAATCATGAGTGTCACCAAATaGAACAATAACACCTGTCAATGTGACTCTTTCCAT +
Preference number: 6 (lower is better)
Translates to: IDTNQKIMSVTK*NNNTCQCDSFH
Trigger: ATGGAAAGAGTCACATTGACAGGTGTTATTGTTGCATTTGGTGACACTCATGATTTTCTGATTAGTGTCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000232985.2
CDS CAA 72 bp TTTATTCGGATACTGATCTTCAGGACACTTGATACATaGATCCATATCTGTTTCATTTGCAATCTCTCCATC +
Preference number: 6 (lower is better)
Translates to: FIRILIFRTLDT*IHICFICNLSI
Trigger: GATGGAGAGATTGCAAATGAAACAGATATGGATCAATGTATCAAGTGTCCTGAAGATCAGTATCCGAATAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000075095.7
ENSMUST00000233759.2