Pregenerated sensors for VMN2R22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095486Ensembl transcript IDs: ENSMUST00000170808.3
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GAGGAGCCCGGAGTGCACTTCTATCCAGTGAGCCTCCTTCCACTCTaGGGGACAGCTCCTCATGGAGTGCCTGGGCAATGGCATACACAG | + |
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Preference number: 5 (lower is better) Translates to: EEPGVHFYPVSLLPL*GTAPHGVPGQWHTQ Trigger: CTGTGTATGCCATTGCCCAGGCACTCCATGAGGAGCTGTCCCTCAGAGTGGAAGGAGGCTCACTGGATAGAAGTGCACTCCGGGCTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS CCA 90 bp | CTTCTATCCAGTGAGCCTCCTTCCACTCTGAGGGACAGCTCCTCATaGAGTGCCTGGGCAATGGCATACACAGCAGCATGGACTTTTGAG | + |
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Preference number: 5 (lower is better) Translates to: LLSSEPPSTLRDSSS*SAWAMAYTAAWTFE Trigger: CTCAAAAGTCCATGCTGCTGTGTATGCCATTGCCCAGGCACTCCATGAGGAGCTGTCCCTCAGAGTGGAAGGAGGCTCACTGGATAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS GCA 90 bp | GTGCATGTCAGCATCAGGGAAAGGGGGATATGTTCCCAGCCAGACTaGACAGATGCACACTTGAATGATGGAACCACAGCAGACTATAGC | + |
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Preference number: 5 (lower is better) Translates to: VHVSIRERGICSQPD*TDAHLNDGTTADYS Trigger: GCTATAGTCTGCTGTGGTTCCATCATTCAAGTGTGCATCTGTGCAGTCTGGCTGGGAACATATCCCCCTTTCCCTGATGCTGACATGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS TCA 90 bp | GGAGCTGGACACTGGTCCCAAGACTCTGATCAAAAGGAGCATAGCTaGTCTGTGGGACATTGTAGAGACTTAGAACTCGGGAGATCTGAG | + |
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Preference number: 5 (lower is better) Translates to: GAGHWSQDSDQKEHS*SVGHCRDLELGRSE Trigger: CTCAGATCTCCCGAGTTCTAAGTCTCTACAATGTCCCACAGATCAGCTATGCTCCTTTTGATCAGAGTCTTGGGACCAGTGTCCAGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS GCA 90 bp | AGCTATAGGGTGAGGTATTCATATCCCAAACATGCAGAGGTCGTGTaGTCAGGCTGCCATTTGGCTCACATTGACTTAGTTGCCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: SYRVRYSYPKHAEVV*SGCHLAHIDLVAWL Trigger: AAGCCAGGCAACTAAGTCAATGTGAGCCAAATGGCAGCCTGAGCACACGACCTCTGCATGTTTGGGATATGAATACCTCACCCTATAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS GCA 90 bp | CTGATCTTCAGGACACTTGATGCACTGATCCATATCTGTATCATTTaGAACCTCTCCCTCTGGACATGGGAGACAATCAAAACAACAGAA | + |
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Preference number: 5 (lower is better) Translates to: LIFRTLDALIHICII*NLSLWTWETIKTTE Trigger: TTCTGTTGTTTTGATTGTCTCCCATGTCCAGAGGGAGAGGTTGCAAATGATACAGATATGGATCAGTGCATCAAGTGTCCTGAAGATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS CCA 90 bp | GTCGTGTGCTCAGGCTGCCATTTGGCTCACATTGACTTAGTTGCCTaGCTTCATGATCAATTAAATATGGACATTCAAATAAGATTATCC | + |
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Preference number: 5 (lower is better) Translates to: VVCSGCHLAHIDLVA*LHDQLNMDIQIRLS Trigger: GGATAATCTTATTTGAATGTCCATATTTAATTGATCATGAAGCCAGGCAACTAAGTCAATGTGAGCCAAATGGCAGCCTGAGCACACGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS GCA 90 bp | CCAGACATTATGAAAAGTAGTATAGAAAGTGGTGTGAACAGGAAGTaGCAGAAGAGAATATGTGTCACCAAATGCAATGATAACACGTGT | + |
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Preference number: 5 (lower is better) Translates to: PDIMKSSIESGVNRK*QKRICVTKCNDNTC Trigger: ACACGTGTTATCATTGCATTTGGTGACACATATTCTCTTCTGGCACTTCCTGTTCACACCACTTTCTATACTACTTTTCATAATGTCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS TCA 72 bp | GGAGTGCACTTCTATCCAGTGAGCCTCCTTCCACTCTaGGGGACAGCTCCTCATGGAGTGCCTGGGCAATGG | + |
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Preference number: 6 (lower is better) Translates to: GVHFYPVSLLPL*GTAPHGVPGQW Trigger: CCATTGCCCAGGCACTCCATGAGGAGCTGTCCCTCAGAGTGGAAGGAGGCTCACTGGATAGAAGTGCACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS CCA 72 bp | AGTGAGCCTCCTTCCACTCTGAGGGACAGCTCCTCATaGAGTGCCTGGGCAATGGCATACACAGCAGCATGG | + |
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Preference number: 6 (lower is better) Translates to: SEPPSTLRDSSS*SAWAMAYTAAW Trigger: CCATGCTGCTGTGTATGCCATTGCCCAGGCACTCCATGAGGAGCTGTCCCTCAGAGTGGAAGGAGGCTCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS CCA 72 bp | CCTTCCACTCTGAGGGACAGCTCCTCATGGAGTGCCTaGGCAATGGCATACACAGCAGCATGGACTTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: PSTLRDSSSWSA*AMAYTAAWTFE Trigger: CTCAAAAGTCCATGCTGCTGTGTATGCCATTGCCCAGGCACTCCATGAGGAGCTGTCCCTCAGAGTGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS GCA 72 bp | AGCATCAGGGAAAGGGGGATATGTTCCCAGCCAGACTaGACAGATGCACACTTGAATGATGGAACCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: SIRERGICSQPD*TDAHLNDGTTA Trigger: TGCTGTGGTTCCATCATTCAAGTGTGCATCTGTGCAGTCTGGCTGGGAACATATCCCCCTTTCCCTGATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS GCA 72 bp | GCAAGGGTGGATCCCTCATTACACCAGAGGATGATTTaGCCAAACTCTGAGTGCATGTCAGCATCAGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: ARVDPSLHQRMI*PNSECMSASGK Trigger: TTTCCCTGATGCTGACATGCACTCAGAGTTTGGGCAAATCATCCTCTGGTGTAATGAGGGATCCACCCTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS TCA 72 bp | CACTGGTCCCAAGACTCTGATCAAAAGGAGCATAGCTaGTCTGTGGGACATTGTAGAGACTTAGAACTCGGG | + |
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Preference number: 6 (lower is better) Translates to: HWSQDSDQKEHS*SVGHCRDLELG Trigger: CCCGAGTTCTAAGTCTCTACAATGTCCCACAGATCAGCTATGCTCCTTTTGATCAGAGTCTTGGGACCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS TCA 72 bp | TCCCTCATTACACCAGAGGATGATTTGCCCAAACTCTaGGTGCATGTCAGCATCAGGGAAAGGGGGATATGT | + |
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Preference number: 6 (lower is better) Translates to: SLITPEDDLPKL*VHVSIRERGIC Trigger: ACATATCCCCCTTTCCCTGATGCTGACATGCACTCAGAGTTTGGGCAAATCATCCTCTGGTGTAATGAGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS CAA 72 bp | GTTCTCCTTATTGGAACTTCTCCCAAGCTGTCCCTTTaGCAAGAATGGATGGAGCTTCCAAGGAAGAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: VLLIGTSPKLSL*QEWMELPRKRS Trigger: GCTCCTCTTCCTTGGAAGCTCCATCCATTCTTGCAAAAGGGACAGCTTGGGAGAAGTTCCAATAAGGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS CCA 72 bp | TGGAGGCCAGAATTGAAAGAATCTCCACTGCCACCATaGTTTTACCTTTGGAGCTCAGGTATGTGGGTACAA | + |
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Preference number: 6 (lower is better) Translates to: WRPELKESPLPP*FYLWSSGMWVQ Trigger: TTGTACCCACATACCTGAGCTCCAAAGGTAAAACCATGGTGGCAGTGGAGATTCTTTCAATTCTGGCCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS CAA 72 bp | GTGCCTGGGCAATGGCATACACAGCAGCATGGACTTTaGAGCTATAGGGTGAGGTATTCATATCCCAAACAT | + |
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Preference number: 6 (lower is better) Translates to: VPGQWHTQQHGL*SYRVRYSYPKH Trigger: ATGTTTGGGATATGAATACCTCACCCTATAGCTCAAAAGTCCATGCTGCTGTGTATGCCATTGCCCAGGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS TCA 72 bp | GGATATGTTCCCAGCCAGACTGCACAGATGCACACTTaGATGATGGAACCACAGCAGACTATAGCATTTGAA | + |
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Preference number: 6 (lower is better) Translates to: GYVPSQTAQMHT*MMEPQQTIAFE Trigger: TTCAAATGCTATAGTCTGCTGTGGTTCCATCATTCAAGTGTGCATCTGTGCAGTCTGGCTGGGAACATATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS CAA 90 bp | TCAAACTCGGTTGCCAAAATCTCCTTGTTCACAATGTTCTCCTTATaGGAACTTCTCCCAAGCTGTCCCTTTTGCAAGAATGGATGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SNSVAKISLFTMFSL*ELLPSCPFCKNGWS Trigger: GCTCCATCCATTCTTGCAAAAGGGACAGCTTGGGAGAAGTTCCAATAAGGAGAACATTGTGAACAAGGAGATTTTGGCAACCGAGTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS CAA 90 bp | CATTGTAGAGACTTAGAACTCGGGAGATCTGAGTTGATATTCCTGTaGAAATGCCTCCTATCACTGCAACCAGCTTATCAGTCTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: HCRDLELGRSELIFL*KCLLSLQPAYQSSQ Trigger: CTGAGAAGACTGATAAGCTGGTTGCAGTGATAGGAGGCATTTCAACAGGAATATCAACTCAGATCTCCCGAGTTCTAAGTCTCTACAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS TCA 72 bp | TCAACAGGTGTTTTCCTAAATCCGAGTGGACAGCTTTaGCTGCAAACAGATAAAGGAATCCCCTTGCCATAT | + |
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Preference number: 6 (lower is better) Translates to: STGVFLNPSGQL*LQTDKGIPLPY Trigger: ATATGGCAAGGGGATTCCTTTATCTGTTTGCAGTCAAAGCTGTCCACTCGGATTTAGGAAAACACCTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS TCA 72 bp | TCCCTCTGGACATGGGAGACAATCAAAACAACAGAATaGTTTCCCTTCAACAGGTGTTTTCCTAAATCCGAG | + |
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Preference number: 6 (lower is better) Translates to: SLWTWETIKTTE*FPFNRCFPKSE Trigger: CTCGGATTTAGGAAAACACCTGTTGAAGGGAAATCATTCTGTTGTTTTGATTGTCTCCCATGTCCAGAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS CAA 72 bp | GAACTTTTCATGGCCTTCATCTCCGTAAAGTCAGCATaGAAGACATGGAATCCCAGGGACATATTGAACAGA | + |
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Preference number: 6 (lower is better) Translates to: ELFMAFISVKSA*KTWNPRDILNR Trigger: TCTGTTCAATATGTCCCTGGGATTCCATGTCTTCAATGCTGACTTTACGGAGATGAAGGCCATGAAAAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS CCA 72 bp | TTGCCAAAATCTCCTTGTTCACAATGTTCTCCTTATTaGAACTTCTCCCAAGCTGTCCCTTTTGCAAGAATG | + |
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Preference number: 6 (lower is better) Translates to: LPKSPCSQCSPY*NFSQAVPFARM Trigger: CATTCTTGCAAAAGGGACAGCTTGGGAGAAGTTCCAATAAGGAGAACATTGTGAACAAGGAGATTTTGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS CAA 72 bp | GTTGCCAAAATCTCCTTGTTCACAATGTTCTCCTTATaGGAACTTCTCCCAAGCTGTCCCTTTTGCAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: VAKISLFTMFSL*ELLPSCPFCKN Trigger: ATTCTTGCAAAAGGGACAGCTTGGGAGAAGTTCCAATAAGGAGAACATTGTGAACAAGGAGATTTTGGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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| CDS CCA 72 bp | TCAGGCTGCCATTTGGCTCACATTGACTTAGTTGCCTaGCTTCATGATCAATTAAATATGGACATTCAAATA | + |
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Preference number: 6 (lower is better) Translates to: SGCHLAHIDLVA*LHDQLNMDIQI Trigger: TATTTGAATGTCCATATTTAATTGATCATGAAGCCAGGCAACTAAGTCAATGTGAGCCAAATGGCAGCCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170808.3 |
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