Pregenerated sensors for VMN2R21 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000093820

Ensembl transcript IDs: ENSMUST00000163607.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AAGGGTGGATCCCTCATTACACCAGAGGATGATTTGCCCAAACTCTaGGTGCATGTCAGCATCAGGGAAAGGGGGATATGTTCCCAGCCA	+
Preference number: 5 (lower is better) Translates to: KGGSLITPEDDLPKL*VHVSIRERGICSQP Trigger: TGGCTGGGAACATATCCCCCTTTCCCTGATGCTGACATGCACTCAGAGTTTGGGCAAATCATCCTCTGGTGTAATGAGGGATCCACCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163607.2
CDS CCA 90 bp	CAAACTCGGTTGCCAAAATCTCCTTGTTCACAATGTTCTCCTTATTaGAACTTCTCCCAAGCTGTCCCTTTTGCAAGAATGGATGGAGCT	+
Preference number: 5 (lower is better) Translates to: QTRLPKSPCSQCSPY*NFSQAVPFARMDGA Trigger: AGCTCCATCCATTCTTGCAAAAGGGACAGCTTGGGAGAAGTTCCAATAAGGAGAACATTGTGAACAAGGAGATTTTGGCAACCGAGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163607.2
CDS TCA 90 bp	GACAGTTATTCTTCTGCTTATTTGGATACTGATCTTCAGGACACTTaGTGCACTGATCCATATCTGTATCATTTGCAACCTCTCCCTCTG	+
Preference number: 5 (lower is better) Translates to: DSYSSAYLDTDLQDT*CTDPYLYHLQPLPL Trigger: CAGAGGGAGAGGTTGCAAATGATACAGATATGGATCAGTGCATCAAGTGTCCTGAAGATCAGTATCCAAATAAGCAGAAGAATAACTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163607.2
CDS CCA 72 bp	ATTGGAACTTCTCCCAAGCTGTCCCTTTTGCAAGAATaGATGGAGCTTCCAAGGGAGAGGAGCCCGGAGTAC	+
Preference number: 6 (lower is better) Translates to: IGTSPKLSLLQE*MELPRERSPEY Trigger: GTACTCCGGGCTCCTCTCCCTTGGAAGCTCCATCCATTCTTGCAAAAGGGACAGCTTGGGAGAAGTTCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163607.2
CDS CAA 90 bp	GTTCACAATGTTCTCCTTATTGGAACTTCTCCCAAGCTGTCCCTTTaGCAAGAATGGATGGAGCTTCCAAGGGAGAGGAGCCCGGAGTAC	+
Preference number: 6 (lower is better) Translates to: VHNVLLIGTSPKLSL*QEWMELPRERSPEY Trigger: GTACTCCGGGCTCCTCTCCCTTGGAAGCTCCATCCATTCTTGCAAAAGGGACAGCTTGGGAGAAGTTCCAATAAGGAGAACATTGTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163607.2

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