RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN2R20 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094145

Ensembl transcript IDs: ENSMUST00000172199.3, ENSMUST00000232807.2

Found 451 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAAGATGCAATAAACACGCCAAGCCTCGACAAGGCCACCCTGTATaGGAAAAGGGAACCACAGACCAGGCAACAGAATCAGAGACTGCC +
Preference number: 1 (lower is better)
Translates to: PRCNKHAKPRQGHPV*EKGTTDQATESETA
Trigger: GGCAGTCTCTGATTCTGTTGCCTGGTCTGTGGTTCCCTTTTCTCATACAGGGTGGCCTTGTCGAGGCTTGGCGTGTTTATTGCATCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 90 bp CGAGATAACTGCCATCCACCTGAACGTCCCCTGAAACTTCCTATCTaGCTGTCAATGCTATGCTTCGCTTTCACCATGGTGGTGCACAGC +
Preference number: 1 (lower is better)
Translates to: RDNCHPPERPLKLPI*LSMLCFAFTMVVHS
Trigger: GCTGTGCACCACCATGGTGAAAGCGAAGCATAGCATTGACAGGCAGATAGGAAGTTTCAGGGGACGTTCAGGTGGATGGCAGTTATCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 90 bp GTGCATGTCAACATCAGGGAAAGGGGGAGATGTTCCCAGCCAGACTaGACAGATGCACACTTGAATGATGGAACCACAGCAGACTATGGC +
Preference number: 1 (lower is better)
Translates to: VHVNIRERGRCSQPD*TDAHLNDGTTADYG
Trigger: GCCATAGTCTGCTGTGGTTCCATCATTCAAGTGTGCATCTGTGCAGTCTGGCTGGGAACATCTCCCCCTTTCCCTGATGTTGACATGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR TCA 90 bp GGGAAAGGGGGAGATGTTCCCAGCCAGACTGCACAGATGCACACTTaGATGATGGAACCACAGCAGACTATGGCATTTGAAAGTCGTGTC +
Preference number: 1 (lower is better)
Translates to: GKGGDVPSQTAQMHT*MMEPQQTMAFESRV
Trigger: GACACGACTTTCAAATGCCATAGTCTGCTGTGGTTCCATCATTCAAGTGTGCATCTGTGCAGTCTGGCTGGGAACATCTCCCCCTTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR GCA 90 bp AGATGGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATaGAAACATTACATGTGTCAGAACAGGGGAACGCCAGGGCCAAGA +
Preference number: 1 (lower is better)
Translates to: RWPSWPSLEREAHWS*KHYMCQNRGTPGPR
Trigger: TCTTGGCCCTGGCGTTCCCCTGTTCTGACACATGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 90 bp GTAACAGAGTTTGGCCTAGTAGGCCATCAATGGGAGGAGAGGCCCTaGTCTTGTGAAGATTATATGCCCTACTACAGGGAAATGCCAGGG +
Preference number: 1 (lower is better)
Translates to: VTEFGLVGHQWEERP*SCEDYMPYYREMPG
Trigger: CCCTGGCATTTCCCTGTAGTAGGGCATATAATCTTCACAAGACCAGGGCCTCTCCTCCCATTGATGGCCTACTAGGCCAAACTCTGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 90 bp AAGGGGGAGATGTTCCCAGCCAGACTGCACAGATGCACACTTGAATaGTGGAACCACAGCAGACTATGGCATTTGAAAGTCGTGTCACCA +
Preference number: 1 (lower is better)
Translates to: KGEMFPARLHRCTLE*WNHSRLWHLKVVSP
Trigger: TGGTGACACGACTTTCAAATGCCATAGTCTGCTGTGGTTCCATCATTCAAGTGTGCATCTGTGCAGTCTGGCTGGGAACATCTCCCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR CCA 90 bp TTGTGGATGGGTTGGTGTTGCTATCACTACACCAGGGTTCCAAAATaGCCACAGGAAGCAGCCTCTCCAGGCTCCATATCATCAATGCTA +
Preference number: 1 (lower is better)
Translates to: LWMGWCCYHYTRVPK*PQEAASPGSISSML
Trigger: TAGCATTGATGATATGGAGCCTGGAGAGGCTGCTTCCTGTGGCCATTTTGGAACCCTGGTGTAGTGATAGCAACACCAACCCATCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 90 bp TCCTCCTCCCATTATCCCTCCCTTATCCTCTCTCACATTCTTCTCTaGAAGGGTAGGCAACCATGGTACTTCAAGTCTCTGCTAGGCAAG +
Preference number: 1 (lower is better)
Translates to: SSSHYPSLILSHILL*KGRQPWYFKSLLGK
Trigger: CTTGCCTAGCAGAGACTTGAAGTACCATGGTTGCCTACCCTTTCAGAGAAGAATGTGAGAGAGGATAAGGGAGGGATAATGGGAGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 90 bp GTCTTTTGTGAGACTATGCCATGGCCTAGCAAACACAGAAGTGGATaGTCACAATCAGTGATTGGATGGATCACAGGGCTCCCAATGGAG +
Preference number: 1 (lower is better)
Translates to: VFCETMPWPSKHRSG*SQSVIGWITGLPME
Trigger: CTCCATTGGGAGCCCTGTGATCCATCCAATCACTGATTGTGAGCATCCACTTCTGTGTTTGCTAGGCCATGGCATAGTCTCACAAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 90 bp ATCAAAAGATGGCCTAGTTGGCCATCAGTGGAAAGAGAGGCCCATTaGTCATGCAAACTTTATATGCCTCAGTACAGGGGAACACCAGGG +
Preference number: 1 (lower is better)
Translates to: IKRWPSWPSVEREAH*SCKLYMPQYRGTPG
Trigger: CCCTGGTGTTCCCCTGTACTGAGGCATATAAAGTTTGCATGACCAATGGGCCTCTCTTTCCACTGATGGCCAACTAGGCCATCTTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 90 bp ATTACTGTCAGGAATTGCAGCTTGTCAATGGGATGGATCTCAAGTTaGGCCGGTTATTGGTTGGGCGTTCTCTCAGTCTCCACTCTATCA +
Preference number: 1 (lower is better)
Translates to: ITVRNCSLSMGWISS*AGYWLGVLSVSTLS
Trigger: TGATAGAGTGGAGACTGAGAGAACGCCCAACCAATAACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 90 bp TTCCTATCTGCCTGTCAATGCTATGCTTCGCTTTCACCATGGTGGTaGACAGCTTCAAGAGAGAAACTGGCTCAAATAACAGGAGGTTCT +
Preference number: 1 (lower is better)
Translates to: FLSACQCYASLSPWW*TASREKLAQITGGS
Trigger: AGAACCTCCTGTTATTTGAGCCAGTTTCTCTCTTGAAGCTGTGCACCACCATGGTGAAAGCGAAGCATAGCATTGACAGGCAGATAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 90 bp AACTTCCTATCTGCCTGTCAATGCTATGCTTCGCTTTCACCATGGTaGTGCACAGCTTCAAGAGAGAAACTGGCTCAAATAACAGGAGGT +
Preference number: 1 (lower is better)
Translates to: NFLSACQCYASLSPW*CTASREKLAQITGG
Trigger: ACCTCCTGTTATTTGAGCCAGTTTCTCTCTTGAAGCTGTGCACCACCATGGTGAAAGCGAAGCATAGCATTGACAGGCAGATAGGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 90 bp CAGATTTCCATTCACTCTCATGGCTATCATAATATCCATCTCCTCTaGCTCCCCCACACCTCCTCAACTGTTCAGCATATTCCCTTTCTC +
Preference number: 1 (lower is better)
Translates to: QISIHSHGYHNIHLL*LPHTSSTVQHIPFL
Trigger: GAGAAAGGGAATATGCTGAACAGTTGAGGAGGTGTGGGGGAGCCAGAGGAGATGGATATTATGATAGCCATGAGAGTGAATGGAAATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 90 bp CAGAGTATCATTATTACTGTCAGGAATTGCAGCTTGTCAATGGGATaGATCTCAAGTTGGGCCGGTTATTGGTTGGGCGTTCTCTCAGTC +
Preference number: 1 (lower is better)
Translates to: QSIIITVRNCSLSMG*ISSWAGYWLGVLSV
Trigger: GACTGAGAGAACGCCCAACCAATAACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 90 bp CACACATTCTCATGTTGTTCTCAACCTCTAATGTGGGAGATCCAATaGAGACTTCAAACTTGGGCTCCTCCTCCCATTATCCCTCCCTTA +
Preference number: 1 (lower is better)
Translates to: HTFSCCSQPLMWEIQ*RLQTWAPPPIIPPL
Trigger: TAAGGGAGGGATAATGGGAGGAGGAGCCCAAGTTTGAAGTCTCCATTGGATCTCCCACATTAGAGGTTGAGAACAACATGAGAATGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 90 bp TCTCTAGGTGAATATGTAACAGAGTTTGGCCTAGTAGGCCATCAATaGGAGGAGAGGCCCTGGTCTTGTGAAGATTATATGCCCTACTAC +
Preference number: 1 (lower is better)
Translates to: SLGEYVTEFGLVGHQ*EERPWSCEDYMPYY
Trigger: GTAGTAGGGCATATAATCTTCACAAGACCAGGGCCTCTCCTCCCATTGATGGCCTACTAGGCCAAACTCTGTTACATATTCACCTAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 90 bp CTCCTCAACTGTTCAGCATATTCCCTTTCTCACCTAGTTCCCTCCTaGCCTCTGCCTTCCATTACCATTATATTCCTGATTCCAAGTGAA +
Preference number: 1 (lower is better)
Translates to: LLNCSAYSLSHLVPS*PLPSITIIFLIPSE
Trigger: TTCACTTGGAATCAGGAATATAATGGTAATGGAAGGCAGAGGGCAGGAGGGAACTAGGTGAGAAAGGGAATATGCTGAACAGTTGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 90 bp GGCCAGCAAAATTTTCTGAAAGGACCCTCATATAGCTGTCTCTTGTaGGGATATGCTAGTGCCTGGCAAATACAGAAGTGGATGCTAACA +
Preference number: 1 (lower is better)
Translates to: GQQNFLKGPSYSCLL*GYASAWQIQKWMLT
Trigger: TGTTAGCATCCACTTCTGTATTTGCCAGGCACTAGCATATCCTCACAAGAGACAGCTATATGAGGGTCCTTTCAGAAAATTTTGCTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 90 bp TCTTTGATGCTTCCCCTATCTCAAGTCTCTTTCTCTTCCTGGAAATaGACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATTCACTCT +
Preference number: 1 (lower is better)
Translates to: SLMLPLSQVSFSSWK*TLCLLHCLQISIHS
Trigger: AGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTCCAGGAAGAGAAAGAGACTTGAGATAGGGGAAGCATCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 90 bp TCTCTTTCTCTTCCTGGAAATGCACTCTATGCCTCCTCCATTGCTTaGAGATTTCCATTCACTCTCATGGCTATCATAATATCCATCTCC +
Preference number: 1 (lower is better)
Translates to: SLSLPGNALYASSIA*RFPFTLMAIIISIS
Trigger: GGAGATGGATATTATGATAGCCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTCCAGGAAGAGAAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 90 bp ATATACAGAGTATCATTATTACTGTCAGGAATTGCAGCTTGTCAATaGGATGGATCTCAAGTTGGGCCGGTTATTGGTTGGGCGTTCTCT +
Preference number: 1 (lower is better)
Translates to: IYRVSLLLSGIAACQ*DGSQVGPVIGWAFS
Trigger: AGAGAACGCCCAACCAATAACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 90 bp CAAGTCTCTTTCTCTTCCTGGAAATGCACTCTATGCCTCCTCCATTaGTTGCAGATTTCCATTCACTCTCATGGCTATCATAATATCCAT +
Preference number: 1 (lower is better)
Translates to: QVSFSSWKCTLCLLH*LQISIHSHGYHNIH
Trigger: ATGGATATTATGATAGCCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTCCAGGAAGAGAAAGAGACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 90 bp AGGGCTCCCAATGGAGGAGCTAGAGAAATTACCCAAGGAGCTAAATaGAACTGCAACCCTATAGATGGAAAAACAATATTAAGTAACCAG +
Preference number: 1 (lower is better)
Translates to: RAPNGGAREITQGAK*NCNPIDGKTILSNQ
Trigger: CTGGTTACTTAATATTGTTTTTCCATCTATAGGGTTGCAGTTCCATTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCATTGGGAGCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 90 bp TTAGTGGCAACAAAGTCGTGGTCTGGTTCATCAAGCTTCAGGTTGTaGGGGGAGGTTACATCAATATATGTGTGCATTTATTTCTTTGTC +
Preference number: 1 (lower is better)
Translates to: LVATKSWSGSSSFRL*GEVTSIYVCIYFFV
Trigger: GACAAAGAAATAAATGCACACATATATTGATGTAACCTCCCCCCACAACCTGAAGCTTGATGAACCAGACCACGACTTTGTTGCCACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 90 bp ATTGATTCTTTGATGCTTCCCCTATCTCAAGTCTCTTTCTCTTCCTaGAAATGCACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATT +
Preference number: 1 (lower is better)
Translates to: IDSLMLPLSQVSFSS*KCTLCLLHCLQISI
Trigger: AATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTCCAGGAAGAGAAAGAGACTTGAGATAGGGGAAGCATCAAAGAATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 90 bp CCCAATGGAGGAGCTAGAGAAATTACCCAAGGAGCTAAATGGAACTaGAACCCTATAGATGGAAAAACAATATTAAGTAACCAGTACACC +
Preference number: 1 (lower is better)
Translates to: PNGGAREITQGAKWN*NPIDGKTILSNQYT
Trigger: GGTGTACTGGTTACTTAATATTGTTTTTCCATCTATAGGGTTGCAGTTCCATTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCATTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 90 bp GTCACTCCCACCAGCAATGGAAGAGAGATTTATGCTCTACATCCTTaGCAGCATATATTATCACTTGAGGTTTTTAATCTTTGCCAGTCT +
Preference number: 1 (lower is better)
Translates to: VTPTSNGREIYALHP*QHILSLEVFNLCQS
Trigger: AGACTGGCAAAGATTAAAAACCTCAAGTGATAATATATGCTGGCAAGGATGTAGAGCATAAATCTCTCTTCCATTGCTGGTGGGAGTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 90 bp CTAGGTATTTTCACTTTCATAATCAATGCCTTGAATGGCAGCAGTTaGGAGGCACAGTCAGATGGTATCTTTGAGTTAAAGGCCATAGAA +
Preference number: 1 (lower is better)
Translates to: LGIFTFIINALNGSS*EAQSDGIFELKAIE
Trigger: TTCTATGGCCTTTAACTCAAAGATACCATCTGACTGTGCCTCCCAACTGCTGCCATTCAAGGCATTGATTATGAAAGTGAAAATACCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 90 bp ACTGATTTCCAAAGTGGCTATATTACCTGTCACTCCCACCAGCAATaGAAGAGAGATTTATGCTCTACATCCTTGCCAGCATATATTATC +
Preference number: 1 (lower is better)
Translates to: TDFQSGYITCHSHQQ*KRDLCSTSLPAYII
Trigger: GATAATATATGCTGGCAAGGATGTAGAGCATAAATCTCTCTTCCATTGCTGGTGGGAGTGACAGGTAATATAGCCACTTTGGAAATCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 90 bp AGTCCTGACTTCCTTGGTGATAAACAGCAGCATGGAATTGTAAGCTaGATAAAACCTTTCTTCTCCAACTTGCTTCTTGGTCATGATGTT +
Preference number: 1 (lower is better)
Translates to: SPDFLGDKQQHGIVS*IKPFFSNLLLGHDV
Trigger: AACATCATGACCAAGAAGCAAGTTGGAGAAGAAAGGTTTTATTCAGCTTACAATTCCATGCTGCTGTTTATCACCAAGGAAGTCAGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR TCA 90 bp TATGGCTCTGTGGTACAACTTGAGGACAAGTTTGGTGATTTCTCTTaGAATTGTTTTCTTGTTCAGGACTGTTTTGACTATCCTGAGTAC +
Preference number: 1 (lower is better)
Translates to: YGSVVQLEDKFGDFS*NCFLVQDCFDYPEY
Trigger: GTACTCAGGATAGTCAAAACAGTCCTGAACAAGAAAACAATTTCAAGAGAAATCACCAAACTTGTCCTCAAGTTGTACCACAGAGCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 90 bp GGGGGAGGTTACATCAATATATGTGTGCATTTATTTCTTTGTCGTTaGTTCAATTCCATTGATCAATGTGTGCTATGGCTCTGTGGTACA +
Preference number: 1 (lower is better)
Translates to: GGGYINICVHLFLCR*FNSIDQCVLWLCGT
Trigger: TGTACCACAGAGCCATAGCACACATTGATCAATGGAATTGAATCAACGACAAAGAAATAAATGCACACATATATTGATGTAACCTCCCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 90 bp AAATATATTATCTGTAAATTATATGAACTGTATCATCTGTGCATTTaGAGGTCCTGGAGGAATAAGGTTGTAGAGTCAGTGCTCTGGGAA +
Preference number: 1 (lower is better)
Translates to: KYIICKLYELYHLCI*RSWRNKVVESVLWE
Trigger: TTCCCAGAGCACTGACTCTACAACCTTATTCCTCCAGGACCTGCAAATGCACAGATGATACAGTTCATATAATTTACAGATAATATATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR CCA 90 bp CAACTGAAATTCATCAGGTCTCCCTCAGCATTAGAAACTAACTTCTaGAATTACCAGGTCATATTTTTCCAAACACTTTTAGTAGGAATG +
Preference number: 1 (lower is better)
Translates to: QLKFIRSPSALETNF*NYQVIFFQTLLVGM
Trigger: CATTCCTACTAAAAGTGTTTGGAAAAATATGACCTGGTAATTCCAGAAGTTAGTTTCTAATGCTGAGGGAGACCTGATGAATTTCAGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 90 bp AATGACAAATATATTATCTGTAAATTATATGAACTGTATCATCTGTaGATTTGCAGGTCCTGGAGGAATAAGGTTGTAGAGTCAGTGCTC +
Preference number: 1 (lower is better)
Translates to: NDKYIICKLYELYHL*ICRSWRNKVVESVL
Trigger: GAGCACTGACTCTACAACCTTATTCCTCCAGGACCTGCAAATGCACAGATGATACAGTTCATATAATTTACAGATAATATATTTGTCATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR CCA 90 bp TTAGAGCAGCATCATTTGTTGAAGATGCTTTCTTTTTCCATTGTATaGTTTAGGCTACTTTATCGAAAGTCACATGTCAATATGTTGCGA +
Preference number: 1 (lower is better)
Translates to: LEQHHLLKMLSFSIV*FRLLYRKSHVNMLR
Trigger: TCGCAACATATTGACATGTGACTTTCGATAAAGTAGCCTAAACCATACAATGGAAAAAGAAAGCATCTTCAACAAATGATGCTGCTCTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 90 bp CAAAAATATCTTAATTTTAGGGAGACAGTTATTCTTCTGCTTATTTaGATACTGATCTTCAGGACACTTGATGCACTGATCCATATCTCC +
Preference number: 1 (lower is better)
Translates to: QKYLNFRETVILLLI*ILIFRTLDALIHIS
Trigger: GGAGATATGGATCAGTGCATCAAGTGTCCTGAAGATCAGTATCCAAATAAGCAGAAGAATAACTGTCTCCCTAAAATTAAGATATTTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CTCACAAGGACGGGTACACCTGAGTGGCAGGCCAGCGCTGAAAGAGAGGGAAACGGGAAAGGCCCCTTGTaGGTGAGACCATCTCTAGGC +
Preference number: 2 (lower is better)
Translates to: LTRTGTPEWQASAEREGNGKGPL*VRPSLG
Trigger: GCCTAGAGATGGTCTCACCCACAAGGGGCCTTTCCC...GTTTCCCTCTCTTTCAGCGCTGGCCTGCCACTCAGGTGTACCCGTCCTTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CTCCCTCCTTCTTCCCCAGAAACACTCGCTGCTGCATGTCTCCTAAGGGCAGGCCACCTAGTTCCCTCCTaGCCTCTGCCTTCCATTACC +
Preference number: 2 (lower is better)
Translates to: LPPSSPETLAAACLLRAGHLVPS*PLPSIT
Trigger: GGTAATGGAAGGCAGAGGGCAGGAGGGAACTAGGTG...GCCTGCCCTTAGGAGACATGCAGCAGCGAGTGTTTCTGGGGAAGAAGGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp CTCACAAGGACGGGTACACCTGAGTGGCAGGCCAGCGCTGAAAGAGAGGGAAACGGTGGGAGGGTAAGTTaGGATGTGTTCGACATGGAG +
Preference number: 2 (lower is better)
Translates to: LTRTGTPEWQASAEREGNGGRVS*DVFDME
Trigger: CTCCATGTCGAACACATCTCAACTTACCCTCCCACC...GTTTCCCTCTCTTTCAGCGCTGGCCTGCCACTCAGGTGTACCCGTCCTTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp CTCCCTCCTTCTTCCCCAGAAACACTCGCTGCTGCATGTCTCCTAAGGGCAGGCGGTGGGAGGGTAAGTTaGGATGTGTTCGACATGGAG +
Preference number: 2 (lower is better)
Translates to: LPPSSPETLAAACLLRAGGGRVS*DVFDME
Trigger: CTCCATGTCGAACACATCTCAACTTACCCTCCCACC...GCCTGCCCTTAGGAGACATGCAGCAGCGAGTGTTTCTGGGGAAGAAGGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp AAAGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGACCTGGAGCAGTTGCTaGACATTGCCTAAGGTGGGC +
Preference number: 2 (lower is better)
Translates to: KGGGKPIPANSSLEPSCRTWSSC*TLPKVG
Trigger: GCCCACCTTAGGCAATGTTCAGCAACTGCTCCAGGT...CCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CTCACAAGGACGGGTACACCTGAGTGGCAGGCCAGCGCTGAAAGAGAGGGAAACTCGCTTTCACCATGGTaGTGCACAGCTTCAAGAGAG +
Preference number: 2 (lower is better)
Translates to: LTRTGTPEWQASAEREGNSLSPW*CTASRE
Trigger: CTCTCTTGAAGCTGTGCACCACCATGGTGAAAGCGA...GTTTCCCTCTCTTTCAGCGCTGGCCTGCCACTCAGGTGTACCCGTCCTTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CTCCCTCCTTCTTCCCCAGAAACACTCGCTGCTGCATGTCTCCTAAGGGCAGGCTCGCTTTCACCATGGTaGTGCACAGCTTCAAGAGAG +
Preference number: 2 (lower is better)
Translates to: LPPSSPETLAAACLLRAGSLSPW*CTASRE
Trigger: CTCTCTTGAAGCTGTGCACCACCATGGTGAAAGCGA...GCCTGCCCTTAGGAGACATGCAGCAGCGAGTGTTTCTGGGGAAGAAGGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp AGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGTGCTAGTTGGCCATCAGTaGAAAGAGAGGCCCATTGGT +
Preference number: 2 (lower is better)
Translates to: RRGKAHSCQFILGAQLQVLVGHQ*KERPIG
Trigger: ACCAATGGGCCTCTCTTTCCACTGATGGCCAACTAG...CACCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp AAAGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGGATGCTCACAATCAGTaGTTGGATGGATCACAGGGC +
Preference number: 2 (lower is better)
Translates to: KGGGKPIPANSSLEPSCRDAHNQ*LDGSQG
Trigger: GCCCTGTGATCCATCCAATCACTGATTGTGAGCATC...CCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp CTCCCTCCTTCTTCCCCAGAAACACTCGCTGCTGCATGTCTCCTAAGGGCAGGCGACTCTCATGTTCTGTaGTTGCTGCTTCAGTCTGTG +
Preference number: 2 (lower is better)
Translates to: LPPSSPETLAAACLLRAGDSHVL*LLLQSV
Trigger: CACAGACTGAAGCAGCAATCACAGAACATGAGAGTC...GCCTGCCCTTAGGAGACATGCAGCAGCGAGTGTTTCTGGGGAAGAAGGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp AGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGTGAATCAATGCCTTGAATaGCAGCAGTTGGGAGGCACA +
Preference number: 2 (lower is better)
Translates to: RRGKAHSCQFILGAQLQVNQCLE*QQLGGT
Trigger: TGTGCCTCCCAACTGCTGCCATTCAAGGCATTGATT...CACCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CTCCCTCCTTCTTCCCCAGAAACACTCGCTGCTGCATGTCTCCTAAGGGCAGGCGAACATTGCCTAAGGTaGGCCAGTGAGTTACATGAC +
Preference number: 2 (lower is better)
Translates to: LPPSSPETLAAACLLRAGEHCLR*ASELHD
Trigger: GTCATGTAACTCACTGGCCCACCTTAGGCAATGTTC...GCCTGCCCTTAGGAGACATGCAGCAGCGAGTGTTTCTGGGGAAGAAGGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp AAAGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGAAATTCCTAGGCAAATaGTTGGACCTGGAGGGCATC +
Preference number: 2 (lower is better)
Translates to: KGGGKPIPANSSLEPSCRKFLGK*LDLEGI
Trigger: GATGCCCTCCAGGTCCAATCATTTGCCTAGGAATTT...CCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp CTCCCTCCTTCTTCCCCAGAAACACTCGCTGCTGCATGTCTCCTAAGGGCAGGCGAGGAAATGCCTCCATaGGATACAACTGTAAGGCAT +
Preference number: 2 (lower is better)
Translates to: LPPSSPETLAAACLLRAGEEMPP*DTTVRH
Trigger: ATGCCTTACAGTTGTATCTCATGGAGGCATTTCCTC...GCCTGCCCTTAGGAGACATGCAGCAGCGAGTGTTTCTGGGGAAGAAGGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp AAAGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGCAGGATAGACTCTCATaGAGAAGAAGGAGCAAGGGA +
Preference number: 2 (lower is better)
Translates to: KGGGKPIPANSSLEPSCRQDRLS*RRRSKG
Trigger: TCCCTTGCTCCTTCTTCTGCATGAGAGTCTATCCTG...CCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CTCCCTCCTTCTTCCCCAGAAACACTCGCTGCTGCATGTCTCCTAAGGGCAGGCAAAAGATGGCCTAGTTaGCCATCAGTGGAAAGAGAG +
Preference number: 2 (lower is better)
Translates to: LPPSSPETLAAACLLRAGKRWPS*PSVERE
Trigger: CTCTCTTTCCACTGATGGCCAACTAGGCCATCTTTT...GCCTGCCCTTAGGAGACATGCAGCAGCGAGTGTTTCTGGGGAAGAAGGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CTCACAAGGACGGGTACACCTGAGTGGCAGGCCAGCGCTGAAAGAGAGGGAAACTGCATTTGCAGGTCCTaGAGGAATAAGGTTGTAGAG +
Preference number: 2 (lower is better)
Translates to: LTRTGTPEWQASAEREGNCICRS*RNKVVE
Trigger: CTCTACAACCTTATTCCTCCAGGACCTGCAAATGCA...GTTTCCCTCTCTTTCAGCGCTGGCCTGCCACTCAGGTGTACCCGTCCTTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CTCACAAGGACGGGTACACCTGAGTGGCAGGCCAGCGCTGAAAGAGAGGGAAACCCATGGTTTTACCTTTaGAGCTCAGGTAAGTGGGTA +
Preference number: 2 (lower is better)
Translates to: LTRTGTPEWQASAEREGNPWFYL*SSGKWV
Trigger: TACCCACTTACCTGAGCTCCAAAGGTAAAACCATGG...GTTTCCCTCTCTTTCAGCGCTGGCCTGCCACTCAGGTGTACCCGTCCTTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp AGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGTGAACTTCTTTCTAGAATaGCCACCTGACCTCAGTAGG +
Preference number: 2 (lower is better)
Translates to: RRGKAHSCQFILGAQLQVNFFLE*PPDLSR
Trigger: CCTACTGAGGTCAGGTGGCCATTCTAGAAAGAAGTT...CACCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp AGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGTGTCAGCTTTCACTAGGTaGACCTGTACAAGACAATGT +
Preference number: 2 (lower is better)
Translates to: RRGKAHSCQFILGAQLQVSAFTR*TCTRQC
Trigger: ACATTGTCTTGTACAGGTTCACCTAGTGAAAGCTGA...CACCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp AAAGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGGACAAAGTTTGGAGCTaGGACAAAAGGATGCACCAT +
Preference number: 2 (lower is better)
Translates to: KGGGKPIPANSSLEPSCRDKVWS*DKRMHH
Trigger: ATGGTGCATCCTTTTGTCTCAGCTCCAAACTTTGTC...CCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp TGGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACGAGCCCAGCTGCAGGTaGCCACGTGTAGGATCTGAT +
Preference number: 2 (lower is better)
Translates to: WPSWPSLEREAHWSCKHYEPSCR*PRVGSD
Trigger: ATCAGATCCTACACGTGGTCACCTGCAGCTGGGCTC...GTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CTCCCTCCTTCTTCCCCAGAAACACTCGCTGCTGCATGTCTCCTAAGGGCAGGCTTCCCTCTGGAGAACTaGAATGAAAGGAACATTCGT +
Preference number: 2 (lower is better)
Translates to: LPPSSPETLAAACLLRAGFPLEN*NERNIR
Trigger: ACGAATGTTCCTTTCATTGCAGTTCTCCAGAGGGAA...GCCTGCCCTTAGGAGACATGCAGCAGCGAGTGTTTCTGGGGAAGAAGGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp AGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGTGTTCCCTCTGGAGAACTaGAATGAAAGGAACATTCGT +
Preference number: 2 (lower is better)
Translates to: RRGKAHSCQFILGAQLQVFPLEN*NERNIR
Trigger: ACGAATGTTCCTTTCATTGCAGTTCTCCAGAGGGAA...CACCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CTCACAAGGACGGGTACACCTGAGTGGCAGGCCAGCGCTGAAAGAGAGGGAAACCATGCAAACTTTATATaGCTCAGTACAGGGGAACAC +
Preference number: 2 (lower is better)
Translates to: LTRTGTPEWQASAEREGNHANFI*LSTGEH
Trigger: GTGTTCCCCTGTACTGAGGCATATAAAGTTTGCATG...GTTTCCCTCTCTTTCAGCGCTGGCCTGCCACTCAGGTGTACCCGTCCTTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CTCCCTCCTTCTTCCCCAGAAACACTCGCTGCTGCATGTCTCCTAAGGGCAGGCCACAATGAAAGTCTTTaGCAAGATAGCAGACACAGC +
Preference number: 2 (lower is better)
Translates to: LPPSSPETLAAACLLRAGHNESL*QDSRHS
Trigger: GCTGTGTCTGCTATCTTGGCAAAGACTTTCATTGTG...GCCTGCCCTTAGGAGACATGCAGCAGCGAGTGTTTCTGGGGAAGAAGGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp AAAGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGAAAAGATGGCCTAGTTaGCCATCAGTGGAAAGAGAG +
Preference number: 2 (lower is better)
Translates to: KGGGKPIPANSSLEPSCRKRWPS*PSVERE
Trigger: CTCTCTTTCCACTGATGGCCAACTAGGCCATCTTTT...CCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp AAAGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGGATTCAAATCTGGCCTaGAGAACTAGAAGACTGGTG +
Preference number: 2 (lower is better)
Translates to: KGGGKPIPANSSLEPSCRDSNLA*RTRRLV
Trigger: CACCAGTCTTCTAGTTCTCCAGGCCAGATTTGAATC...CCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp AAAGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGTGTGCTATGGCTCTGTaGTACAACTTGAGGACAAGT +
Preference number: 2 (lower is better)
Translates to: KGGGKPIPANSSLEPSCRCAMAL*YNLRTS
Trigger: ACTTGTCCTCAAGTTGTACCACAGAGCCATAGCACA...CCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp AAAGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGGTCAGATGGTATCTTTaGGTTAAAGGCCATAGAAGG +
Preference number: 2 (lower is better)
Translates to: KGGGKPIPANSSLEPSCRVRWYL*VKGHRR
Trigger: CCTTCTATGGCCTTTAACTCAAAGATACCATCTGAC...CCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACATGGGAGTGGGCAGGTTaGGTAGCAGAATGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: GLVGHHWKERLTGHANITWEWAG*VAEWRK
Trigger: CTTCCTCCATTCTGCTACTCAACCTGCCCACTCCCA...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp AAAGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGCATGCAAACTTTATATaGCTCAGTACAGGGGAACAC +
Preference number: 2 (lower is better)
Translates to: KGGGKPIPANSSLEPSCRHANFI*LSTGEH
Trigger: GTGTTCCCCTGTACTGAGGCATATAAAGTTTGCATG...CCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp AGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGTGGAGCTTTTTATCAGCTaGATCTGTTCTCTCGGAAAA +
Preference number: 2 (lower is better)
Translates to: RRGKAHSCQFILGAQLQVELFIS*ICSLGK
Trigger: TTTTCCGAGAGAACAGATGCAGCTGATAAAAAGCTC...CACCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CTCCCTCCTTCTTCCCCAGAAACACTCGCTGCTGCATGTCTCCTAAGGGCAGGCTATAACACACCAAGATaGAATAAACACGCCAAGCCT +
Preference number: 2 (lower is better)
Translates to: LPPSSPETLAAACLLRAGYNTPR*NKHAKP
Trigger: AGGCTTGGCGTGTTTATTGCATCTTGGTGTGTTATA...GCCTGCCCTTAGGAGACATGCAGCAGCGAGTGTTTCTGGGGAAGAAGGAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CTCCCTCCTTCTTCCCCAGAAACACTCGCTGCTGCATGTCTCCTAAGGGCAGGCGAAAGAGAGGCCCATTaGTCATGCAAACTTTATATG +
Preference number: 2 (lower is better)
Translates to: LPPSSPETLAAACLLRAGEREAH*SCKLYM
Trigger: CATATAAAGTTTGCATGACCAATGGGCCTCTCTTTC...GCCTGCCCTTAGGAGACATGCAGCAGCGAGTGTTTCTGGGGAAGAAGGAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp CTCCCTCCTTCTTCCCCAGAAACACTCGCTGCTGCATGTCTCCTAAGGGCAGGCATGATATGTTCTCACTaGCAAGTGGATATTAGCTCA +
Preference number: 2 (lower is better)
Translates to: LPPSSPETLAAACLLRAGMICSH*QVDISS
Trigger: TGAGCTAATATCCACTTGTCAGTGAGAACATATCAT...GCCTGCCCTTAGGAGACATGCAGCAGCGAGTGTTTCTGGGGAAGAAGGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp ATTACTGTCAGGAATTGCAGCTTGTCAATGGGATGGATCTCAAGTTGGGCCGGTGGGAAAGCCCATTCCTaGCAATTCATCCTTGGAGCC +
Preference number: 2 (lower is better)
Translates to: ITVRNCSLSMGWISSWAGGKAHS*QFILGA
Trigger: GGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCC...ACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACACCTACTACAGGGAAATaGCAGGGTCAGGAAGTGGGA +
Preference number: 2 (lower is better)
Translates to: GLVGHHWKERLTGHANITPTTGK*QGQEVG
Trigger: TCCCACTTCCTGACCCTGGCATTTCCCTGTAGTAGG...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACAAATATCCATCTCCTCTaGCTCCCCCACACCTCCTCA +
Preference number: 2 (lower is better)
Translates to: GLVGHHWKERLTGHANITNIHLL*LPHTSS
Trigger: TGAGGAGGTGTGGGGGAGCCAGAGGAGATGGATATT...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACAACCAGGGTTCCAAAATaGCCACAGGAAGCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: GLVGHHWKERLTGHANITTRVPK*PQEAAS
Trigger: AGAGGCTGCTTCCTGTGGCCATTTTGGAACCCTGGT...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACAGAGCTGCAAACAGGATaGGAGATAACTGCCATCCAC +
Preference number: 2 (lower is better)
Translates to: GLVGHHWKERLTGHANITELQTG*EITAIH
Trigger: GTGGATGGCAGTTATCTCGCATCCTGTTTGCAGCTC...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CTCCCTCCTTCTTCCCCAGAAACACTCGCTGCTGCATGTCTCCTAAGGGCAGGCGATCTTTCACTTGCTTaGTTATTGTTACACCAAGAT +
Preference number: 2 (lower is better)
Translates to: LPPSSPETLAAACLLRAGDLSLA*LLLHQD
Trigger: ATCTTGGTGTAACAATAAGCAAGCAAGTGAAAGATC...GCCTGCCCTTAGGAGACATGCAGCAGCGAGTGTTTCTGGGGAAGAAGGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp AGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGTGTATGCTCTACATCCTTaGCAGCATATATTATCACTT +
Preference number: 2 (lower is better)
Translates to: RRGKAHSCQFILGAQLQVYALHP*QHILSL
Trigger: AAGTGATAATATATGCTGGCAAGGATGTAGAGCATA...CACCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACACTATGTGTGCACCTGTaGATGTGTACAGTGGACCTG +
Preference number: 2 (lower is better)
Translates to: GLVGHHWKERLTGHANITLCVHL*MCTVDL
Trigger: CAGGTCCACTGTACACATGCACAGGTGCACACATAG...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CTCCCTCCTTCTTCCCCAGAAACACTCGCTGCTGCATGTCTCCTAAGGGCAGGCGAAGGCATGAGAATATaGAAATTGTTCTTATCCTCA +
Preference number: 2 (lower is better)
Translates to: LPPSSPETLAAACLLRAGEGMRI*KLFLSS
Trigger: TGAGGATAAGAACAATTTCCATATTCTCATGCCTTC...GCCTGCCCTTAGGAGACATGCAGCAGCGAGTGTTTCTGGGGAAGAAGGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACAGACAGCAACAGCTTTTaGGATAGCCCCCAATCCAGT +
Preference number: 2 (lower is better)
Translates to: GLVGHHWKERLTGHANITDSNSF*DSPQSS
Trigger: ACTGGATTGGGGGCTATCCCAAAAGCTGTTGCTGTC...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 90 bp TATTACTGTCAGGAATTGCAGCTTGTCAATGGGATGGATCTCAAGTaGGGCCGGTTATTGGTTGGGCGTTCTCTCAGTCTCCACTCTATC +
Preference number: 2 (lower is better)
Translates to: YYCQELQLVNGMDLK*GRLLVGRSLSLHSI
Trigger: GATAGAGTGGAGACTGAGAGAACGCCCAACCAATAACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACATCTGGTCATCTCCAATaGCAGCAGGGACACTTGAAT +
Preference number: 2 (lower is better)
Translates to: GLVGHHWKERLTGHANITSGHLQ*QQGHLN
Trigger: ATTCAAGTGTCCCTGCTGTCATTGGAGATGACCAGA...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp CCAGCCTCTTTGCTGGAGCTTTTTATCAGCTGCATCTGTTCTCTCGGAAAATATACACAAGGATCACAGTaGGGCTTCCCTCTGGAGAAC +
Preference number: 2 (lower is better)
Translates to: PASLLELFISCICSLGKYTQGSQ*GFPLEN
Trigger: GTTCTCCAGAGGGAAGCCTCACTGTGATCCTTGTGT...ATATTTTCCGAGAGAACAGATGCAGCTGATAAAAAGCTCCAGCAAAGAGGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp GAAATGCACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATTCACTCTCATGGCTGCTTCAGTCTGTGTaGATCCTAGTGAACCCTGCT +
Preference number: 2 (lower is better)
Translates to: EMHSMPPPLLADFHSLSWLLQSV*ILVNPA
Trigger: AGCAGGGTTCACTAGGATTCACACAGACTGAAGCAG...CCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp CAAATCTGGCCTGGAGAACTAGAAGACTGGTGGGAGGGTAAGTTGAGATGTGTTCTCTTTTCTTTGTCATaGAGGGGACCTGGAGCAGTT +
Preference number: 2 (lower is better)
Translates to: QIWPGELEDWWEGKLRCVLFSLS*RGPGAV
Trigger: AACTGCTCCAGGTCCCCTTCATGACAAAGAAAAGAG...AACACATCTCAACTTACCCTCCCACCAGTCTTCTAGTTCTCCAGGCCAGATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACAGCTACAACTTGGGTTTaGCCTTGGAATGATCTGGTC +
Preference number: 2 (lower is better)
Translates to: GLVGHHWKERLTGHANITATTWV*PWNDLV
Trigger: GACCAGATCATTCCAAGGGCAAACCCAAGTTGTAGC...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp AAAGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGGATCTTTCACTTGCTTaGTTATTGTTACACCAAGAT +
Preference number: 2 (lower is better)
Translates to: KGGGKPIPANSSLEPSCRDLSLA*LLLHQD
Trigger: ATCTTGGTGTAACAATAAGCAAGCAAGTGAAAGATC...CCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CAAATCTGGCCTGGAGAACTAGAAGACTGGTGGGAGGGTAAGTTGAGATGTGTTGAACTGTATCATCTGTaGATTTGCAGGTCCTGGAGG +
Preference number: 2 (lower is better)
Translates to: QIWPGELEDWWEGKLRCVELYHL*ICRSWR
Trigger: CCTCCAGGACCTGCAAATGCACAGATGATACAGTTC...AACACATCTCAACTTACCCTCCCACCAGTCTTCTAGTTCTCCAGGCCAGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp ATTACTGTCAGGAATTGCAGCTTGTCAATGGGATGGATCTCAAGTTGGGCCGGTAGTGAGGCTTCCCTCTaGAGAACTGCAATGAAAGGA +
Preference number: 2 (lower is better)
Translates to: ITVRNCSLSMGWISSWAGSEASL*RTAMKG
Trigger: TCCTTTCATTGCAGTTCTCCAGAGGGAAGCCTCACT...ACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp AAAGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGGAGATGTGTTCGACATaGAGTATGTACTTATATGAA +
Preference number: 2 (lower is better)
Translates to: KGGGKPIPANSSLEPSCREMCST*SMYLYE
Trigger: TTCATATAAGTACATACTCCATGTCGAACACATCTC...CCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp TGGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACGGAGAACTAGAAGACTaGTGGGAGGGTAAGTTGAGA +
Preference number: 2 (lower is better)
Translates to: WPSWPSLEREAHWSCKHYGELED*WEGKLR
Trigger: TCTCAACTTACCCTCCCACCAGTCTTCTAGTTCTCC...GTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GGGCAGGCCTCTCAGGAATATCAACTCAATATAACACACCAAGATGCAATAAACCTGCCAATTCATCCTTaGAGCCCAGCTGCAGGTGAC +
Preference number: 2 (lower is better)
Translates to: GQASQEYQLNITHQDAINLPIHP*SPAAGD
Trigger: GTCACCTGCAGCTGGGCTCCAAGGATGAATTGGCAG...GTTTATTGCATCTTGGTGTGTTATATTGAGTTGATATTCCTGAGAGGCCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 90 bp TTGTTCTCAACCTCTAATGTGGGAGATCCAATGGAGACTTCAAACTaGGGCTCCTCCTCCCATTATCCCTCCCTTATCCTCTCTCACATT +
Preference number: 2 (lower is better)
Translates to: LFSTSNVGDPMETSN*GSSSHYPSLILSHI
Trigger: AATGTGAGAGAGGATAAGGGAGGGATAATGGGAGGAGGAGCCCAAGTTTGAAGTCTCCATTGGATCTCCCACATTAGAGGTTGAGAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTTTTGCCTGCCCCTATGTCTAGTTTCCAAAGAGGAATCTGGTCATCTCCAATaGCAGCAGGGACACTTGAAT +
Preference number: 2 (lower is better)
Translates to: CVCVCVFCLPLCLVSKEESGHLQ*QQGHLN
Trigger: ATTCAAGTGTCCCTGCTGTCATTGGAGATGACCAGA...TTCCTCTTTGGAAACTAGACATAGGGGCAGGCAAAACACACACACACACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp TGCTGGAGCTTTTTATCAGCTGCATCTGTTCTCTCGGAAAATATTTGGAATCGCACACAAGGATCACAGTaGGGCTTCCCTCTGGAGAAC +
Preference number: 2 (lower is better)
Translates to: CWSFLSAASVLSENIWNRTQGSQ*GFPLEN
Trigger: GTTCTCCAGAGGGAAGCCTCACTGTGATCCTTGTGT...GCGATTCCAAATATTTTCCGAGAGAACAGATGCAGCTGATAAAAAGCTCCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp GAGCTCATGTCTCTAGTTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATGATGCTCACAATCAGTaGTTGGATGGATCACAGGGC +
Preference number: 2 (lower is better)
Translates to: ELMSLVAYVSEDGLVGHHDAHNQ*LDGSQG
Trigger: GCCCTGTGATCCATCCAATCACTGATTGTGAGCATC...ATGATGGCCAACTAGGCCATCTTCTGATACATATGCAACTAGAGACATGAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTTTTGCCTGCCCCTATGTCTAGTTTCCAAAGAGGAAAAATTCCTAGGCAAATaGTTGGACCTGGAGGGCATC +
Preference number: 2 (lower is better)
Translates to: CVCVCVFCLPLCLVSKEEKFLGK*LDLEGI
Trigger: GATGCCCTCCAGGTCCAATCATTTGCCTAGGAATTT...TTCCTCTTTGGAAACTAGACATAGGGGCAGGCAAAACACACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp CAAATCTGGCCTGGAGAACTAGAAGACTGGTGGGAGGGTAAGTTGAGATGTGTTTTGTTTTTGCCTCATTaGAGCTCTCTGGTAGCCTTC +
Preference number: 2 (lower is better)
Translates to: QIWPGELEDWWEGKLRCVLFLPH*SSLVAF
Trigger: GAAGGCTACCAGAGAGCTTCAATGAGGCAAAAACAA...AACACATCTCAACTTACCCTCCCACCAGTCTTCTAGTTCTCCAGGCCAGATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CAAATCTGGCCTGGAGAACTAGAAGACTGGTGGGAGGGTAAGTTGAGATGTGTTGAGGCCCATTGGTCATaGAAACTTTATATGCCTCAG +
Preference number: 2 (lower is better)
Translates to: QIWPGELEDWWEGKLRCVEAHWS*KLYMPQ
Trigger: CTGAGGCATATAAAGTTTGCATGACCAATGGGCCTC...AACACATCTCAACTTACCCTCCCACCAGTCTTCTAGTTCTCCAGGCCAGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp GAAATGCACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATTCACTCTCATGGAACCTCAAACATCCTTaGTTGGCCCTCCATCATGTC +
Preference number: 2 (lower is better)
Translates to: EMHSMPPPLLADFHSLSWNLKHP*LALHHV
Trigger: GACATGATGGAGGGCCAAGCAAGGATGTTTGAGGTT...CCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp GAAATGCACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATTCACTCTCATGGGCCTCCTCCATTGCTTaGAGATTTCCATTCACTCTC +
Preference number: 2 (lower is better)
Translates to: EMHSMPPPLLADFHSLSWASSIA*RFPFTL
Trigger: GAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGC...CCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTTTTGCCTGCCCCTATGTCTAGTTTCCAAAGAGGAACAATCAGTGATTGGATaGATCACAGGGCTCCCAATG +
Preference number: 2 (lower is better)
Translates to: CVCVCVFCLPLCLVSKEEQSVIG*ITGLPM
Trigger: CATTGGGAGCCCTGTGATCCATCCAATCACTGATTG...TTCCTCTTTGGAAACTAGACATAGGGGCAGGCAAAACACACACACACACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GAGCTCATGTCTCTAGTTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATTTGAATGGCAGCAGTTaGGAGGCACAGTCAGATGGT +
Preference number: 2 (lower is better)
Translates to: ELMSLVAYVSEDGLVGHHLNGSS*EAQSDG
Trigger: ACCATCTGACTGTGCCTCCCAACTGCTGCCATTCAA...ATGATGGCCAACTAGGCCATCTTCTGATACATATGCAACTAGAGACATGAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp TGGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACTTCCAGCCTCTTTGCTaGAGCTTTTTATCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: WPSWPSLEREAHWSCKHYFQPLC*SFLSAA
Trigger: TGCAGCTGATAAAAAGCTCCAGCAAAGAGGCTGGAA...GTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp TGGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACGTCTCTTTCTCTTCCTaGAAATGCACTCTATGCCTC +
Preference number: 2 (lower is better)
Translates to: WPSWPSLEREAHWSCKHYVSFSS*KCTLCL
Trigger: GAGGCATAGAGTGCATTTCCAGGAAGAGAAAGAGAC...GTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp AAAAAGCTACAGAGGCAAAGTTTGAAGCTGAGACAGAAGGAAAGACCATCCACTACCAGGGTTCCAAAATaGCCACAGGAAGCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: KKLQRQSLKLRQKERPSTTRVPK*PQEAAS
Trigger: AGAGGCTGCTTCCTGTGGCCATTTTGGAACCCTGGT...AGTGGATGGTCTTTCCTTCTGTCTCAGCTTCAAACTTTGCCTCTGTAGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp AAAAAGCTACAGAGGCAAAGTTTGAAGCTGAGACAGAAGGAAAGACCATCCACTAAGAACATCCCTCCATaGCCTCTGATCAGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: KKLQRQSLKLRQKERPSTKNIPP*PLISSC
Trigger: GCAGGAGCTGATCAGAGGCCATGGAGGGATGTTCTT...AGTGGATGGTCTTTCCTTCTGTCTCAGCTTCAAACTTTGCCTCTGTAGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp TGGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACGAGCACAAAACCCTCTaGGACTCTGAAATTTCAATG +
Preference number: 2 (lower is better)
Translates to: WPSWPSLEREAHWSCKHYEHKTL*DSEISM
Trigger: CATTGAAATTTCAGAGTCTCAGAGGGTTTTGTGCTC...GTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp ATTACTGTCAGGAATTGCAGCTTGTCAATGGGATGGATCTCAAGTTGGGCCGGTACCATGGGTGAGAAATaGCTTCTTCCATTGTCACAA +
Preference number: 2 (lower is better)
Translates to: ITVRNCSLSMGWISSWAGTMGEK*LLPLSQ
Trigger: TTGTGACAATGGAAGAAGTCATTTCTCACCCATGGT...ACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp CAAATCTGGCCTGGAGAACTAGAAGACTGGTGGGAGGGTAAGTTGAGATGTGTTAGCAGCTTTTCAGAGTaGAGACTCCTCCTCTTTAAA +
Preference number: 2 (lower is better)
Translates to: QIWPGELEDWWEGKLRCVSSFSE*RLLLFK
Trigger: TTTAAAGAGGAGGAGTCTTCACTCTGAAAAGCTGCT...AACACATCTCAACTTACCCTCCCACCAGTCTTCTAGTTCTCCAGGCCAGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp GAGCTCATGTCTCTAGTTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATTCTCACATTCTTCTCTaGAAGGGTAGGCAACCATGG +
Preference number: 2 (lower is better)
Translates to: ELMSLVAYVSEDGLVGHHSHILL*KGRQPW
Trigger: CCATGGTTGCCTACCCTTTCAGAGAAGAATGTGAGA...ATGATGGCCAACTAGGCCATCTTCTGATACATATGCAACTAGAGACATGAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp TCTAGAAGCTGGAAAGAACCCAGATGTCCCTCAACACAAGAATCGACACAGAATGACTCTCATGTTCTGTaGTTGCTGCTTCAGTCTGTG +
Preference number: 2 (lower is better)
Translates to: SRSWKEPRCPSTQESTQNDSHVL*LLLQSV
Trigger: CACAGACTGAAGCAGCAATCACAGAACATGAGAGTC...ATTCTGTGTCGATTCTTGTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp GAGCTCATGTCTCTAGTTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATGCACCATCTAGAGACTaGCATATCCAGGGATGGATA +
Preference number: 2 (lower is better)
Translates to: ELMSLVAYVSEDGLVGHHAPSRD*HIQGWI
Trigger: TATCCATCCCTGGATATGGCAGTCTCTAGATGGTGC...ATGATGGCCAACTAGGCCATCTTCTGATACATATGCAACTAGAGACATGAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp TCTAGAAGCTGGAAAGAACCCAGATGTCCCTCAACACAAGAATCGACACAGAATGCACCATCTAGAGACTaGCATATCCAGGGATGGATA +
Preference number: 2 (lower is better)
Translates to: SRSWKEPRCPSTQESTQNAPSRD*HIQGWI
Trigger: TATCCATCCCTGGATATGGCAGTCTCTAGATGGTGC...ATTCTGTGTCGATTCTTGTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp ATTACTGTCAGGAATTGCAGCTTGTCAATGGGATGGATCTCAAGTTGGGCCGGTTCTTTCCAGCCTCTTTaGTGGAGCTTTTTATCAGCT +
Preference number: 2 (lower is better)
Translates to: ITVRNCSLSMGWISSWAGSFQPL*WSFLSA
Trigger: AGCTGATAAAAAGCTCCAGCAAAGAGGCTGGAAAGA...ACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CAAATCTGGCCTGGAGAACTAGAAGACTGGTGGGAGGGTAAGTTGAGATGTGTTTATCATCTGTGCATTTaGAGGTCCTGGAGGAATAAG +
Preference number: 2 (lower is better)
Translates to: QIWPGELEDWWEGKLRCVYHLCI*RSWRNK
Trigger: CTTATTCCTCCAGGACCTGCAAATGCACAGATGATA...AACACATCTCAACTTACCCTCCCACCAGTCTTCTAGTTCTCCAGGCCAGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTTTTGCCTGCCCCTATGTCTAGTTTCCAAAGAGGAAGTCACCATCCACATTTaGAATGTGCTTCCTGGTTTG +
Preference number: 2 (lower is better)
Translates to: CVCVCVFCLPLCLVSKEEVTIHI*NVLPGL
Trigger: CAAACCAGGAAGCACATTGCAAATGTGGATGGTGAC...TTCCTCTTTGGAAACTAGACATAGGGGCAGGCAAAACACACACACACACACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAATGGAACTGCAACCCTATAGATAGTGAGGCTTCCCTCTaGAGAACTGCAATGAAAGGA +
Preference number: 2 (lower is better)
Translates to: GGAREITQGAKWNCNPIDSEASL*RTAMKG
Trigger: TCCTTTCATTGCAGTTCTCCAGAGGGAAGCCTCACT...ATCTATAGGGTTGCAGTTCCATTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GAAATGCACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATTCACTCTCATGGTGTGAGACTATGCCATaGCCTAGCAAACACAGAAGT +
Preference number: 2 (lower is better)
Translates to: EMHSMPPPLLADFHSLSWCETMP*PSKHRS
Trigger: ACTTCTGTGTTTGCTAGGCCATGGCATAGTCTCACA...CCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CCAGCCTCTTTGCTGGAGCTTTTTATCAGCTGCATCTGTTCTCTCGGAAAATATGGAGAACTAGAAGACTaGTGGGAGGGTAAGTTGAGA +
Preference number: 2 (lower is better)
Translates to: PASLLELFISCICSLGKYGELED*WEGKLR
Trigger: TCTCAACTTACCCTCCCACCAGTCTTCTAGTTCTCC...ATATTTTCCGAGAGAACAGATGCAGCTGATAAAAAGCTCCAGCAAAGAGGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GAAATGCACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATTCACTCTCATGGCACTCCCACCAGCAATaGAAGAGAGATTTATGCTCT +
Preference number: 2 (lower is better)
Translates to: EMHSMPPPLLADFHSLSWHSHQQ*KRDLCS
Trigger: AGAGCATAAATCTCTCTTCCATTGCTGGTGGGAGTG...CCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACAAAATCCAGCAATGAGTaGCATACTGCCTTCAAGTCA +
Preference number: 2 (lower is better)
Translates to: GLVGHHWKERLTGHANITKSSNE*HTAFKS
Trigger: TGACTTGAAGGCAGTATGCCACTCATTGCTGGATTT...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 90 bp AAGTCTGTGAATCCCACTGGGACTCTGCCTAAGCTCTTATCCATGTaGTTCTACCTGAATAGTGAAAAGAGCACAAAACCCTCTGAGACT +
Preference number: 2 (lower is better)
Translates to: KSVNPTGTLPKLLSM*FYLNSEKSTKPSET
Trigger: AGTCTCAGAGGGTTTTGTGCTCTTTTCACTATTCAGGTAGAACAACATGGATAAGAGCTTAGGCAGAGTCCCAGTGGGATTCACAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp TCTAGAAGCTGGAAAGAACCCAGATGTCCCTCAACACAAGAATCGACACAGAATGACAGCAGGGACACTTaGATAAATAGCACTTGCCAT +
Preference number: 2 (lower is better)
Translates to: SRSWKEPRCPSTQESTQNDSRDT*INSTCH
Trigger: ATGGCAAGTGCTATTTATTCAAGTGTCCCTGCTGTC...ATTCTGTGTCGATTCTTGTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp AAAAAGCTACAGAGGCAAAGTTTGAAGCTGAGACAGAAGGAAAGACCATCCACTGTATCTTCTACCCACTaGTGTGTGGGATATCCTCAG +
Preference number: 2 (lower is better)
Translates to: KKLQRQSLKLRQKERPSTVSSTH*CVGYPQ
Trigger: CTGAGGATATCCCACACATCAGTGGGTAGAAGATAC...AGTGGATGGTCTTTCCTTCTGTCTCAGCTTCAAACTTTGCCTCTGTAGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp GAAATGCACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATTCACTCTCATGGAGCAGCTTTTCAGAGTaGAGACTCCTCCTCTTTAAA +
Preference number: 2 (lower is better)
Translates to: EMHSMPPPLLADFHSLSWSSFSE*RLLLFK
Trigger: TTTAAAGAGGAGGAGTCTTCACTCTGAAAAGCTGCT...CCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp CACCACTTATACAGTGGAAAGATTTGTCATTTTTCTTCAACTGTAGCAGACAATGAGCCCAGCTGCAGGTaGCCACGTGTAGGATCTGAT +
Preference number: 2 (lower is better)
Translates to: HHLYSGKICHFSSTVADNEPSCR*PRVGSD
Trigger: ATCAGATCCTACACGTGGTCACCTGCAGCTGGGCTC...ATTGTCTGCTACAGTTGAAGAAAAATGACAAATCTTTCCACTGTATAAGTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACAAGTTTTGTGTCAACTTaGCATAGCAGGAGTTTCACA +
Preference number: 2 (lower is better)
Translates to: GLVGHHWKERLTGHANITSFVST*HSRSFT
Trigger: TGTGAAACTCCTGCTATGTCAAGTTGACACAAAACT...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp AAAAAGCTACAGAGGCAAAGTTTGAAGCTGAGACAGAAGGAAAGACCATCCACTAACAGAATCAGAGACTaGCCTCCCATTCTCAGGACT +
Preference number: 2 (lower is better)
Translates to: KKLQRQSLKLRQKERPSTNRIRD*PPILRT
Trigger: AGTCCTGAGAATGGGAGGGCAGTCTCTGATTCTGTT...AGTGGATGGTCTTTCCTTCTGTCTCAGCTTCAAACTTTGCCTCTGTAGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CCAGCCTCTTTGCTGGAGCTTTTTATCAGCTGCATCTGTTCTCTCGGAAAATATCTCTTCCTCTTCCTGTaGTGGTTGATCAGGGATATA +
Preference number: 2 (lower is better)
Translates to: PASLLELFISCICSLGKYLFLFL*WLIRDI
Trigger: TATATCCCTGATCAACCAGCACAGGAAGAGGAAGAG...ATATTTTCCGAGAGAACAGATGCAGCTGATAAAAAGCTCCAGCAAAGAGGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp GGGCAGGCCTCTCAGGAATATCAACTCAATATAACACACCAAGATGCAATAAACCACCAGAGGATGATTTaGCCAAACTCTGAGTGCATG +
Preference number: 2 (lower is better)
Translates to: GQASQEYQLNITHQDAINHQRMI*PNSECM
Trigger: CATGCACTCAGAGTTTGGGCAAATCATCCTCTGGTG...GTTTATTGCATCTTGGTGTGTTATATTGAGTTGATATTCCTGAGAGGCCTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp ATTACTGTCAGGAATTGCAGCTTGTCAATGGGATGGATCTCAAGTTGGGCCGGTGAAAGAGAGGCCCATTaGTCATGCAAACTTTATATG +
Preference number: 2 (lower is better)
Translates to: ITVRNCSLSMGWISSWAGEREAH*SCKLYM
Trigger: CATATAAAGTTTGCATGACCAATGGGCCTCTCTTTC...ACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACAGGAACAAAACACCCATaGAAAGAGTTACAGAGACAA +
Preference number: 2 (lower is better)
Translates to: GLVGHHWKERLTGHANITGTKHP*KELQRQ
Trigger: TTGTCTCTGTAACTCTTTCCATGGGTGTTTTGTTCC...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GAAATGCACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATTCACTCTCATGGCAGACAAGACAGAGATaGAACCAAGACAGTATTCTG +
Preference number: 2 (lower is better)
Translates to: EMHSMPPPLLADFHSLSWQTRQR*NQDSIL
Trigger: CAGAATACTGTCTTGGTTCCATCTCTGTCTTGTCTG...CCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GAGCTCATGTCTCTAGTTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATAAGGGTAGGCAACCATaGTACTTCAAGTCTCTGCTA +
Preference number: 2 (lower is better)
Translates to: ELMSLVAYVSEDGLVGHHKGRQP*YFKSLL
Trigger: TAGCAGAGACTTGAAGTACCATGGTTGCCTACCCTT...ATGATGGCCAACTAGGCCATCTTCTGATACATATGCAACTAGAGACATGAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp TCTAGAAGCTGGAAAGAACCCAGATGTCCCTCAACACAAGAATCGACACAGAATATGTGGGAGATCCAATaGAGACTTCAAACTTGGGCT +
Preference number: 2 (lower is better)
Translates to: SRSWKEPRCPSTQESTQNMWEIQ*RLQTWA
Trigger: AGCCCAAGTTTGAAGTCTCCATTGGATCTCCCACAT...ATTCTGTGTCGATTCTTGTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CCTCAAACAAGACAAGAGCTTATCTTTCTCATCTATGGATATCAGGAAAATTTCGCCAAGAATTGGGAGTaGGTGGTTAGGGGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: PQTRQELIFLIYGYQENFAKNWE*VVRGVG
Trigger: CCCCACTCCCCTAACCACCCACTCCCAATTCTTGGC...GAAATTTTCCTGATATCCATAGATGAGAAAGATAAGCTCTTGTCTTGTTTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CCTCAAACAAGACAAGAGCTTATCTTTCTCATCTATGGATATCAGGAAAATTTCGCCAGGGCCAAGAATTaGGAGTGGGTGGTTAGGGGA +
Preference number: 2 (lower is better)
Translates to: PQTRQELIFLIYGYQENFARAKN*EWVVRG
Trigger: TCCCCTAACCACCCACTCCCAATTCTTGGCCCTGGC...GAAATTTTCCTGATATCCATAGATGAGAAAGATAAGCTCTTGTCTTGTTTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GCTAGAACTATTTCCAATTTCATGAGAAACTGCCAAACTGATTTCCAAAGTGGCGTAGAGTCAGTGCTCTaGGAAGTACAGGCCCAAGTG +
Preference number: 2 (lower is better)
Translates to: ARTISNFMRNCQTDFQSGVESVL*EVQAQV
Trigger: CACTTGGGCCTGTACTTCCCAGAGCACTGACTCTAC...GCCACTTTGGAAATCAGTTTGGCAGTTTCTCATGAAATTGGAAATAGTTCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GAAATGCACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATTCACTCTCATGGAACCACAGCAGACTATaGCATTTGAAAGTCGTGTCA +
Preference number: 2 (lower is better)
Translates to: EMHSMPPPLLADFHSLSWNHSRL*HLKVVS
Trigger: TGACACGACTTTCAAATGCCATAGTCTGCTGTGGTT...CCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR CAA 90 bp GAATTGGGAACAAAACACCCATGGAAAGAGTTACAGAGACAAAGTTaGGAGCTGAGACAAAAGGATGCACCATCTAGAGACTGCCATATC +
Preference number: 2 (lower is better)
Translates to: ELGTKHPWKELQRQS*ELRQKDAPSRDCHI
Trigger: GATATGGCAGTCTCTAGATGGTGCATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCTTTCCATGGGTGTTTTGTTCCCAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 90 bp GTCTCTTTCTCTTCCTGGAAATGCACTCTATGCCTCCTCCATTGCTaGCAGATTTCCATTCACTCTCATGGCTATCATAATATCCATCTC +
Preference number: 2 (lower is better)
Translates to: VSFSSWKCTLCLLHC*QISIHSHGYHNIHL
Trigger: GAGATGGATATTATGATAGCCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTCCAGGAAGAGAAAGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 90 bp TCTGCAAATATACAGAGTATCATTATTACTGTCAGGAATTGCAGCTaGTCAATGGGATGGATCTCAAGTTGGGCCGGTTATTGGTTGGGC +
Preference number: 2 (lower is better)
Translates to: SANIQSIIITVRNCS*SMGWISSWAGYWLG
Trigger: GCCCAACCAATAACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTGTATATTTGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACAAACCCTCTGAGACTCTaGAATTTCAATGACATATTG +
Preference number: 2 (lower is better)
Translates to: GLVGHHWKERLTGHANITNPLRL*NFNDIL
Trigger: CAATATGTCATTGAAATTTCAGAGTCTCAGAGGGTT...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp TCTAGAAGCTGGAAAGAACCCAGATGTCCCTCAACACAAGAATCGACACAGAATTCAGCTTTCACTAGGTaGACCTGTACAAGACAATGT +
Preference number: 2 (lower is better)
Translates to: SRSWKEPRCPSTQESTQNSAFTR*TCTRQC
Trigger: ACATTGTCTTGTACAGGTTCACCTAGTGAAAGCTGA...ATTCTGTGTCGATTCTTGTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACACTTCTCTACTCACATTaGTTTCAGAGCTTTAGCAAT +
Preference number: 2 (lower is better)
Translates to: GLVGHHWKERLTGHANITLLYSH*FQSFSN
Trigger: ATTGCTAAAGCTCTGAAATCAATGTGAGTAGAGAAG...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp ATTACTGTCAGGAATTGCAGCTTGTCAATGGGATGGATCTCAAGTTGGGCCGGTAGACGGAATCTGAGATaGTTTGATTTACATTTCCTC +
Preference number: 2 (lower is better)
Translates to: ITVRNCSLSMGWISSWAGRRNLR*FDLHFL
Trigger: GAGGAAATGTAAATCAAATCATCTCAGATTCCGTCT...ACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp TCTAGAAGCTGGAAAGAACCCAGATGTCCCTCAACACAAGAATCGACACAGAATCTAGGAGGACATAGCTaGGATTTCTGTTATTTGCTC +
Preference number: 2 (lower is better)
Translates to: SRSWKEPRCPSTQESTQNLGGHS*DFCYLL
Trigger: GAGCAAATAACAGAAATCTCAGCTATGTCCTCCTAG...ATTCTGTGTCGATTCTTGTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp AAAAAGCTACAGAGGCAAAGTTTGAAGCTGAGACAGAAGGAAAGACCATCCACTCATTACACCAGAGGATaGTTTGCCCAAACTCTGAGT +
Preference number: 2 (lower is better)
Translates to: KKLQRQSLKLRQKERPSTHYTRG*FAQTLS
Trigger: ACTCAGAGTTTGGGCAAATCATCCTCTGGTGTAATG...AGTGGATGGTCTTTCCTTCTGTCTCAGCTTCAAACTTTGCCTCTGTAGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp GAAATGCACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATTCACTCTCATGGGTAAGACCCTACAAGTaGTTAGTTGCTGATACCTTT +
Preference number: 2 (lower is better)
Translates to: EMHSMPPPLLADFHSLSWVRPYK*LVADTF
Trigger: AAAGGTATCAGCAACTAAGCACTTGTAGGGTCTTAC...CCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp AAAAAGCTACAGAGGCAAAGTTTGAAGCTGAGACAGAAGGAAAGACCATCCACTCTTTCACCATGGTGGTaGACAGCTTCAAGAGAGAAA +
Preference number: 2 (lower is better)
Translates to: KKLQRQSLKLRQKERPSTLSPWW*TASREK
Trigger: TTTCTCTCTTGAAGCTGTGCACCACCATGGTGAAAG...AGTGGATGGTCTTTCCTTCTGTCTCAGCTTCAAACTTTGCCTCTGTAGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp TGCTGGAGCTTTTTATCAGCTGCATCTGTTCTCTCGGAAAATATTTGGAATCGCCTTTCACCATGGTGGTaGACAGCTTCAAGAGAGAAA +
Preference number: 2 (lower is better)
Translates to: CWSFLSAASVLSENIWNRLSPWW*TASREK
Trigger: TTTCTCTCTTGAAGCTGTGCACCACCATGGTGAAAG...GCGATTCCAAATATTTTCCGAGAGAACAGATGCAGCTGATAAAAAGCTCCAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTTTTGCCTGCCCCTATGTCTAGTTTCCAAAGAGGAAAAACACAGAAGTGGATaGTCACAATCAGTGATTGGA +
Preference number: 2 (lower is better)
Translates to: CVCVCVFCLPLCLVSKEEKHRSG*SQSVIG
Trigger: TCCAATCACTGATTGTGAGCATCCACTTCTGTGTTT...TTCCTCTTTGGAAACTAGACATAGGGGCAGGCAAAACACACACACACACACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp TCTAGAAGCTGGAAAGAACCCAGATGTCCCTCAACACAAGAATCGACACAGAATTCTTTTGTGAGACTATaGCATGGCCTAGCAAACACA +
Preference number: 2 (lower is better)
Translates to: SRSWKEPRCPSTQESTQNSFVRL*HGLANT
Trigger: TGTGTTTGCTAGGCCATGGCATAGTCTCACAAAAGA...ATTCTGTGTCGATTCTTGTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CAAATCTGGCCTGGAGAACTAGAAGACTGGTGGGAGGGTAAGTTGAGATGTGTTTATAAAGAGAAAAGATaGAGTGGCCCTGTCTCTAAT +
Preference number: 2 (lower is better)
Translates to: QIWPGELEDWWEGKLRCVYKEKR*SGPVSN
Trigger: ATTAGAGACAGGGCCACTGCATCTTTTCTCTTTATA...AACACATCTCAACTTACCCTCCCACCAGTCTTCTAGTTCTCCAGGCCAGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACAGTCCTTTTGGGACTGTaGTATATAGATGATATTCTC +
Preference number: 2 (lower is better)
Translates to: GLVGHHWKERLTGHANITVLLGL*YIDDIL
Trigger: GAGAATATCATCTATATAGCACAGTCCCAAAAGGAC...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CCTCAAACAAGACAAGAGCTTATCTTTCTCATCTATGGATATCAGGAAAATTTCCACCTAGTTCCCTCCTaGCCTCTGCCTTCCATTACC +
Preference number: 2 (lower is better)
Translates to: PQTRQELIFLIYGYQENFHLVPS*PLPSIT
Trigger: GGTAATGGAAGGCAGAGGGCAGGAGGGAACTAGGTG...GAAATTTTCCTGATATCCATAGATGAGAAAGATAAGCTCTTGTCTTGTTTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp GAAATGCACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATTCACTCTCATGGTATAACACACCAAGATaGAATAAACACGCCAAGCCT +
Preference number: 2 (lower is better)
Translates to: EMHSMPPPLLADFHSLSWYNTPR*NKHAKP
Trigger: AGGCTTGGCGTGTTTATTGCATCTTGGTGTGTTATA...CCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp AAAAAGCTACAGAGGCAAAGTTTGAAGCTGAGACAGAAGGAAAGACCATCCACTCTAACAGTTATCTACTaGATGTATAACAGCGCCCCC +
Preference number: 2 (lower is better)
Translates to: KKLQRQSLKLRQKERPSTLTVIY*MYNSAP
Trigger: GGGGGCGCTGTTATACATGCAGTAGATAACTGTTAG...AGTGGATGGTCTTTCCTTCTGTCTCAGCTTCAAACTTTGCCTCTGTAGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GAAATGCACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATTCACTCTCATGGTTTGTTTACTGTGTCTaGTCATCTCCAATGACAGCA +
Preference number: 2 (lower is better)
Translates to: EMHSMPPPLLADFHSLSWFVYCV*SSPMTA
Trigger: TGCTGTCATTGGAGATGACCAGACACAGTAAACAAA...CCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAATGGAACTGCAACCCTATAGATTCACAAGCTACAACTTaGGTTTGCCCTTGGAATGAT +
Preference number: 2 (lower is better)
Translates to: GGAREITQGAKWNCNPIDSQATT*VCPWND
Trigger: ATCATTCCAAGGGCAAACCCAAGTTGTAGCTTGTGA...ATCTATAGGGTTGCAGTTCCATTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CAAATCTGGCCTGGAGAACTAGAAGACTGGTGGGAGGGTAAGTTGAGATGTGTTGTTCTCACTGACAAGTaGATATTAGCTCAGAAACTT +
Preference number: 2 (lower is better)
Translates to: QIWPGELEDWWEGKLRCVVLTDK*ILAQKL
Trigger: AAGTTTCTGAGCTAATATCCACTTGTCAGTGAGAAC...AACACATCTCAACTTACCCTCCCACCAGTCTTCTAGTTCTCCAGGCCAGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp TGCTGGAGCTTTTTATCAGCTGCATCTGTTCTCTCGGAAAATATTTGGAATCGCGATTCAAATCTGGCCTaGAGAACTAGAAGACTGGTG +
Preference number: 2 (lower is better)
Translates to: CWSFLSAASVLSENIWNRDSNLA*RTRRLV
Trigger: CACCAGTCTTCTAGTTCTCCAGGCCAGATTTGAATC...GCGATTCCAAATATTTTCCGAGAGAACAGATGCAGCTGATAAAAAGCTCCAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp TGGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACACCAAAGTAACCTACTaGTTCAATGTAAGCCAATAC +
Preference number: 2 (lower is better)
Translates to: WPSWPSLEREAHWSCKHYTKVTY*FNVSQY
Trigger: GTATTGGCTTACATTGAACCAGTAGGTTACTTTGGT...GTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CCTCAAACAAGACAAGAGCTTATCTTTCTCATCTATGGATATCAGGAAAATTTCCTGCCAATTCATCCTTaGAGCCCAGCTGCAGGTGAC +
Preference number: 2 (lower is better)
Translates to: PQTRQELIFLIYGYQENFLPIHP*SPAAGD
Trigger: GTCACCTGCAGCTGGGCTCCAAGGATGAATTGGCAG...GAAATTTTCCTGATATCCATAGATGAGAAAGATAAGCTCTTGTCTTGTTTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CTGCAAATATACAGAGTATCATTATTACTGTCAGGAATTGCAGCTTGTCAATGGAATATCCATCTCCTCTaGCTCCCCCACACCTCCTCA +
Preference number: 2 (lower is better)
Translates to: LQIYRVSLLLSGIAACQWNIHLL*LPHTSS
Trigger: TGAGGAGGTGTGGGGGAGCCAGAGGAGATGGATATT...CCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTGTATATTTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 90 bp AGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATaGGGAACAAAACACCCATGGAAAGAGTTACAGAGACAAAGTTTG +
Preference number: 2 (lower is better)
Translates to: RRTKTKVWTLCPFLE*GTKHPWKELQRQSL
Trigger: CAAACTTTGTCTCTGTAACTCTTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp GAAATGCACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATTCACTCTCATGGAGACGGAATCTGAGATaGTTTGATTTACATTTCCTC +
Preference number: 2 (lower is better)
Translates to: EMHSMPPPLLADFHSLSWRRNLR*FDLHFL
Trigger: GAGGAAATGTAAATCAAATCATCTCAGATTCCGTCT...CCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp GGGCAGGCCTCTCAGGAATATCAACTCAATATAACACACCAAGATGCAATAAACTTTGGCTTAGTGGAGTaGAGCATGGGCATCATTATT +
Preference number: 2 (lower is better)
Translates to: GQASQEYQLNITHQDAINFGLVE*SMGIII
Trigger: AATAATGATGCCCATGCTTCACTCCACTAAGCCAAA...GTTTATTGCATCTTGGTGTGTTATATTGAGTTGATATTCCTGAGAGGCCTGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp GAGCTCATGTCTCTAGTTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATGATCTAGAGCTAAGATaGACAAGGAAGAGAGAAAAC +
Preference number: 2 (lower is better)
Translates to: ELMSLVAYVSEDGLVGHHDLELR*TRKREN
Trigger: GTTTTCTCTCTTCCTTGTTCATCTTAGCTCTAGATC...ATGATGGCCAACTAGGCCATCTTCTGATACATATGCAACTAGAGACATGAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAATGGAACTGCAACCCTATAGATTGCTTATTTGGATACTaGTCTTCAGGACACTTGATG +
Preference number: 2 (lower is better)
Translates to: GGAREITQGAKWNCNPIDCLFGY*SSGHLM
Trigger: CATCAAGTGTCCTGAAGATCAGTATCCAAATAAGCA...ATCTATAGGGTTGCAGTTCCATTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp GAAATGCACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATTCACTCTCATGGGGTACAATATTGCAGTaGACAAACACTCTCTTTAGT +
Preference number: 2 (lower is better)
Translates to: EMHSMPPPLLADFHSLSWGTILQ*TNTLFS
Trigger: ACTAAAGAGAGTGTTTGTGCACTGCAATATTGTACC...CCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp GAAATGCACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATTCACTCTCATGGATAGTGGTACAATATTaGAGTGCACAAACACTCTCT +
Preference number: 2 (lower is better)
Translates to: EMHSMPPPLLADFHSLSWIVVQY*SAQTLS
Trigger: AGAGAGTGTTTGTGCACTGCAATATTGTACCACTAT...CCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp GAGCTCATGTCTCTAGTTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATGTAAGACCCTACAAGTaGTTAGTTGCTGATACCTTT +
Preference number: 2 (lower is better)
Translates to: ELMSLVAYVSEDGLVGHHVRPYK*LVADTF
Trigger: AAAGGTATCAGCAACTAAGCACTTGTAGGGTCTTAC...ATGATGGCCAACTAGGCCATCTTCTGATACATATGCAACTAGAGACATGAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp TCTAGAAGCTGGAAAGAACCCAGATGTCCCTCAACACAAGAATCGACACAGAATGAGCTTTTTATCAGCTaGATCTGTTCTCTCGGAAAA +
Preference number: 2 (lower is better)
Translates to: SRSWKEPRCPSTQESTQNELFIS*ICSLGK
Trigger: TTTTCCGAGAGAACAGATGCAGCTGATAAAAAGCTC...ATTCTGTGTCGATTCTTGTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp TCTAGAAGCTGGAAAGAACCCAGATGTCCCTCAACACAAGAATCGACACAGAATTTTTTGACCAGGAAATaGCATCTGAGGATCTGTAGT +
Preference number: 2 (lower is better)
Translates to: SRSWKEPRCPSTQESTQNFLTRK*HLRICS
Trigger: ACTACAGATCCTCAGATGGCATTTCCTGGTCAAAAA...ATTCTGTGTCGATTCTTGTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTAGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp GGGCAGGCCTCTCAGGAATATCAACTCAATATAACACACCAAGATGCAATAAACGAACGTGATTGTTTTTaGCTCATTGAAGCTCTCTGG +
Preference number: 2 (lower is better)
Translates to: GQASQEYQLNITHQDAINERDCF*LIEALW
Trigger: CCAGAGAGCTTCAATGAGGCAAAAACAATCACGTTC...GTTTATTGCATCTTGGTGTGTTATATTGAGTTGATATTCCTGAGAGGCCTGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GAGCTCATGTCTCTAGTTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATTTTGTTTACTGTGTCTaGTCATCTCCAATGACAGCA +
Preference number: 2 (lower is better)
Translates to: ELMSLVAYVSEDGLVGHHFVYCV*SSPMTA
Trigger: TGCTGTCATTGGAGATGACCAGACACAGTAAACAAA...ATGATGGCCAACTAGGCCATCTTCTGATACATATGCAACTAGAGACATGAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTTTTGCCTGCCCCTATGTCTAGTTTCCAAAGAGGAATCTCCACTGTTTTTATaGCCAAATAGAAGCAACTCA +
Preference number: 2 (lower is better)
Translates to: CVCVCVFCLPLCLVSKEESPLFL*PNRSNS
Trigger: TGAGTTGCTTCTATTTGGCCATAAAAACAGTGGAGA...TTCCTCTTTGGAAACTAGACATAGGGGCAGGCAAAACACACACACACACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GCTAGAACTATTTCCAATTTCATGAGAAACTGCCAAACTGATTTCCAAAGTGGCCAATCAGTGATTGGATaGATCACAGGGCTCCCAATG +
Preference number: 2 (lower is better)
Translates to: ARTISNFMRNCQTDFQSGQSVIG*ITGLPM
Trigger: CATTGGGAGCCCTGTGATCCATCCAATCACTGATTG...GCCACTTTGGAAATCAGTTTGGCAGTTTCTCATGAAATTGGAAATAGTTCTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp ATTACTGTCAGGAATTGCAGCTTGTCAATGGGATGGATCTCAAGTTGGGCCGGTGAGATGTGTTCGACATaGAGTATGTACTTATATGAA +
Preference number: 2 (lower is better)
Translates to: ITVRNCSLSMGWISSWAGEMCST*SMYLYE
Trigger: TTCATATAAGTACATACTCCATGTCGAACACATCTC...ACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTTTTGCCTGCCCCTATGTCTAGTTTCCAAAGAGGAAACCAAAGTAACCTACTaGTTCAATGTAAGCCAATAC +
Preference number: 2 (lower is better)
Translates to: CVCVCVFCLPLCLVSKEETKVTY*FNVSQY
Trigger: GTATTGGCTTACATTGAACCAGTAGGTTACTTTGGT...TTCCTCTTTGGAAACTAGACATAGGGGCAGGCAAAACACACACACACACACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GCTAGAACTATTTCCAATTTCATGAGAAACTGCCAAACTGATTTCCAAAGTGGCAATCAATGCCTTGAATaGCAGCAGTTGGGAGGCACA +
Preference number: 2 (lower is better)
Translates to: ARTISNFMRNCQTDFQSGNQCLE*QQLGGT
Trigger: TGTGCCTCCCAACTGCTGCCATTCAAGGCATTGATT...GCCACTTTGGAAATCAGTTTGGCAGTTTCTCATGAAATTGGAAATAGTTCTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 90 bp CAAGATAGCAGACACAGCAACAGAAAATACAACCCCAAAGATCATTaGTCTCAAGACACAAGTGACTGTGCTAGGTTGGCCAATGAATAT +
Preference number: 2 (lower is better)
Translates to: QDSRHSNRKYNPKDH*SQDTSDCARLANEY
Trigger: ATATTCATTGGCCAACCTAGCACAGTCACTTGTGTCTTGAGACAAATGATCTTTGGGGTTGTATTTTCTGTTGCTGTGTCTGCTATCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp AATTTGCGAAACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGGACAGCAGGGACACTTaGATAAATAGCACTTGCCAT +
Preference number: 2 (lower is better)
Translates to: NLRNMKLKKNEDQSVDTLDSRDT*INSTCH
Trigger: ATGGCAAGTGCTATTTATTCAAGTGTCCCTGCTGTC...CAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTTTCGCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp GAGCTCATGTCTCTAGTTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATGTTTTTAACCATGGGTaGGAAATGACTTCTTCCATT +
Preference number: 2 (lower is better)
Translates to: ELMSLVAYVSEDGLVGHHVFNHG*EMTSSI
Trigger: AATGGAAGAAGTCATTTCTCACCCATGGTTAAAAAC...ATGATGGCCAACTAGGCCATCTTCTGATACATATGCAACTAGAGACATGAGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp AAAAAGCTACAGAGGCAAAGTTTGAAGCTGAGACAGAAGGAAAGACCATCCACTGTCTCCACTCTATCATaGATCCCTCTATTTCATGTA +
Preference number: 2 (lower is better)
Translates to: KKLQRQSLKLRQKERPSTVSTLS*IPLFHV
Trigger: TACATGAAATAGAGGGATTCATGATAGAGTGGAGAC...AGTGGATGGTCTTTCCTTCTGTCTCAGCTTCAAACTTTGCCTCTGTAGCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp GGGCAGGCCTCTCAGGAATATCAACTCAATATAACACACCAAGATGCAATAAACAAACACAGAAGTGGATaGTCACAATCAGTGATTGGA +
Preference number: 2 (lower is better)
Translates to: GQASQEYQLNITHQDAINKHRSG*SQSVIG
Trigger: TCCAATCACTGATTGTGAGCATCCACTTCTGTGTTT...GTTTATTGCATCTTGGTGTGTTATATTGAGTTGATATTCCTGAGAGGCCTGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CACCACTTATACAGTGGAAAGATTTGTCATTTTTCTTCAACTGTAGCAGACAATCACATGTCAATATGTTaGGAGTCGTCCAGCGGCTCA +
Preference number: 2 (lower is better)
Translates to: HHLYSGKICHFSSTVADNHMSIC*ESSSGS
Trigger: TGAGCCGCTGGACGACTCGCAACATATTGACATGTG...ATTGTCTGCTACAGTTGAAGAAAAATGACAAATCTTTCCACTGTATAAGTGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CACCACTTATACAGTGGAAAGATTTGTCATTTTTCTTCAACTGTAGCAGACAATCTAGTTGGCCATCAGTaGAAAGAGAGGCCCATTGGT +
Preference number: 2 (lower is better)
Translates to: HHLYSGKICHFSSTVADNLVGHQ*KERPIG
Trigger: ACCAATGGGCCTCTCTTTCCACTGATGGCCAACTAG...ATTGTCTGCTACAGTTGAAGAAAAATGACAAATCTTTCCACTGTATAAGTGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CCAGCCTCTTTGCTGGAGCTTTTTATCAGCTGCATCTGTTCTCTCGGAAAATATGTTCTCACTGACAAGTaGATATTAGCTCAGAAACTT +
Preference number: 2 (lower is better)
Translates to: PASLLELFISCICSLGKYVLTDK*ILAQKL
Trigger: AAGTTTCTGAGCTAATATCCACTTGTCAGTGAGAAC...ATATTTTCCGAGAGAACAGATGCAGCTGATAAAAAGCTCCAGCAAAGAGGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GAGCTCATGTCTCTAGTTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATTGTTGGAATTTTGATTaGGTTGCTCAAATCAGGAGA +
Preference number: 2 (lower is better)
Translates to: ELMSLVAYVSEDGLVGHHCWNFD*VAQIRR
Trigger: TCTCCTGATTTGAGCAACCCAATCAAAATTCCAACA...ATGATGGCCAACTAGGCCATCTTCTGATACATATGCAACTAGAGACATGAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CCAGCCTCTTTGCTGGAGCTTTTTATCAGCTGCATCTGTTCTCTCGGAAAATATTGTTGGAATTTTGATTaGGTTGCTCAAATCAGGAGA +
Preference number: 2 (lower is better)
Translates to: PASLLELFISCICSLGKYCWNFD*VAQIRR
Trigger: TCTCCTGATTTGAGCAACCCAATCAAAATTCCAACA...ATATTTTCCGAGAGAACAGATGCAGCTGATAAAAAGCTCCAGCAAAGAGGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp TCTAGAAGCTGGAAAGAACCCAGATGTCCCTCAACACAAGAATCGACACAGAATTTCTTCAATGCCGTTTaGTTCCATATGGTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: SRSWKEPRCPSTQESTQNFFNAV*FHMVLF
Trigger: AAACAGAACCATATGGAACCAAACGGCATTGAAGAA...ATTCTGTGTCGATTCTTGTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp AAAAAGCTACAGAGGCAAAGTTTGAAGCTGAGACAGAAGGAAAGACCATCCACTATATGTAACAGAGTTTaGCCTAGTAGGCCATCAATG +
Preference number: 2 (lower is better)
Translates to: KKLQRQSLKLRQKERPSTICNRV*PSRPSM
Trigger: CATTGATGGCCTACTAGGCCAAACTCTGTTACATAT...AGTGGATGGTCTTTCCTTCTGTCTCAGCTTCAAACTTTGCCTCTGTAGCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTTTTGCCTGCCCCTATGTCTAGTTTCCAAAGAGGAAGAGATGGTTCCACCATaGACTATAAAATTAATGACA +
Preference number: 2 (lower is better)
Translates to: CVCVCVFCLPLCLVSKEEEMVPP*TIKLMT
Trigger: TGTCATTAATTTTATAGTCCATGGTGGAACCATCTC...TTCCTCTTTGGAAACTAGACATAGGGGCAGGCAAAACACACACACACACACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CACCACTTATACAGTGGAAAGATTTGTCATTTTTCTTCAACTGTAGCAGACAATCTAGGCTGGCAGTCTTaGTTGTATAAGAGAGCAGGC +
Preference number: 2 (lower is better)
Translates to: HHLYSGKICHFSSTVADNLGWQS*LYKRAG
Trigger: GCCTGCTCTCTTATACAACCAAGACTGCCAGCCTAG...ATTGTCTGCTACAGTTGAAGAAAAATGACAAATCTTTCCACTGTATAAGTGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTTTTGCCTGCCCCTATGTCTAGTTTCCAAAGAGGAAATTCTTCTGCTTATTTaGATACTGATCTTCAGGACA +
Preference number: 2 (lower is better)
Translates to: CVCVCVFCLPLCLVSKEEILLLI*ILIFRT
Trigger: TGTCCTGAAGATCAGTATCCAAATAAGCAGAAGAAT...TTCCTCTTTGGAAACTAGACATAGGGGCAGGCAAAACACACACACACACACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GAAATGCACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATTCACTCTCATGGACAATCCTAAAATCATaGCTGAAAAGGCAGATAAAC +
Preference number: 2 (lower is better)
Translates to: EMHSMPPPLLADFHSLSWTILKS*LKRQIN
Trigger: GTTTATCTGCCTTTTCAGCCATGATTTTAGGATTGT...CCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAATGGAACTGCAACCCTATAGATGGATCACATAGCATTTaGGAAGGAATATACAGAGTA +
Preference number: 2 (lower is better)
Translates to: GGAREITQGAKWNCNPIDGSHSI*EGIYRV
Trigger: TACTCTGTATATTCCTTCCCAAATGCTATGTGATCC...ATCTATAGGGTTGCAGTTCCATTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR CAA 90 bp ATTCAAATCTGGCCTGGAGAACTAGAAGACTGGTGGGAGGGTAAGTaGAGATGTGTTCGACATGGAGTATGTACTTATATGAAAATGTTT +
Preference number: 2 (lower is better)
Translates to: IQIWPGELEDWWEGK*RCVRHGVCTYMKMF
Trigger: AAACATTTTCATATAAGTACATACTCCATGTCGAACACATCTCAACTTACCCTCCCACCAGTCTTCTAGTTCTCCAGGCCAGATTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp GCTAGAACTATTTCCAATTTCATGAGAAACTGCCAAACTGATTTCCAAAGTGGCGAGCACAAAACCCTCTaGGACTCTGAAATTTCAATG +
Preference number: 2 (lower is better)
Translates to: ARTISNFMRNCQTDFQSGEHKTL*DSEISM
Trigger: CATTGAAATTTCAGAGTCTCAGAGGGTTTTGTGCTC...GCCACTTTGGAAATCAGTTTGGCAGTTTCTCATGAAATTGGAAATAGTTCTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp CCTCAAACAAGACAAGAGCTTATCTTTCTCATCTATGGATATCAGGAAAATTTCGTATCTTCTACCCACTaGTGTGTGGGATATCCTCAG +
Preference number: 2 (lower is better)
Translates to: PQTRQELIFLIYGYQENFVSSTH*CVGYPQ
Trigger: CTGAGGATATCCCACACATCAGTGGGTAGAAGATAC...GAAATTTTCCTGATATCCATAGATGAGAAAGATAAGCTCTTGTCTTGTTTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp GCTAGAACTATTTCCAATTTCATGAGAAACTGCCAAACTGATTTCCAAAGTGGCACCATGGGTGAGAAATaGCTTCTTCCATTGTCACAA +
Preference number: 2 (lower is better)
Translates to: ARTISNFMRNCQTDFQSGTMGEK*LLPLSQ
Trigger: TTGTGACAATGGAAGAAGTCATTTCTCACCCATGGT...GCCACTTTGGAAATCAGTTTGGCAGTTTCTCATGAAATTGGAAATAGTTCTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp CTGCAAATATACAGAGTATCATTATTACTGTCAGGAATTGCAGCTTGTCAATGGGATCTTCAGGACACTTaGTGCACTGATCCATATCTC +
Preference number: 2 (lower is better)
Translates to: LQIYRVSLLLSGIAACQWDLQDT*CTDPYL
Trigger: GAGATATGGATCAGTGCATCAAGTGTCCTGAAGATC...CCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTGTATATTTGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CACCACTTATACAGTGGAAAGATTTGTCATTTTTCTTCAACTGTAGCAGACAATGCTACAACTTGGGTTTaGCCTTGGAATGATCTGGTC +
Preference number: 2 (lower is better)
Translates to: HHLYSGKICHFSSTVADNATTWV*PWNDLV
Trigger: GACCAGATCATTCCAAGGGCAAACCCAAGTTGTAGC...ATTGTCTGCTACAGTTGAAGAAAAATGACAAATCTTTCCACTGTATAAGTGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp GCTAGAACTATTTCCAATTTCATGAGAAACTGCCAAACTGATTTCCAAAGTGGCTCTTTCCAGCCTCTTTaGTGGAGCTTTTTATCAGCT +
Preference number: 2 (lower is better)
Translates to: ARTISNFMRNCQTDFQSGSFQPL*WSFLSA
Trigger: AGCTGATAAAAAGCTCCAGCAAAGAGGCTGGAAAGA...GCCACTTTGGAAATCAGTTTGGCAGTTTCTCATGAAATTGGAAATAGTTCTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CTGCAAATATACAGAGTATCATTATTACTGTCAGGAATTGCAGCTTGTCAATGGTTCCCTCCTGCCCTCTaGCTTCCATTACCATTATAT +
Preference number: 2 (lower is better)
Translates to: LQIYRVSLLLSGIAACQWFPPAL*LPLPLY
Trigger: ATATAATGGTAATGGAAGGCAGAGGGCAGGAGGGAA...CCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTGTATATTTGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp TCTAGAAGCTGGAAAGAACCCAGATGTCCCTCAACACAAGAATCGACACAGAATCTCTCGGAAAATATTTaGAATCGCTATTGTACACTA +
Preference number: 2 (lower is better)
Translates to: SRSWKEPRCPSTQESTQNLSENI*NRYCTL
Trigger: TAGTGTACAATAGCGATTCCAAATATTTTCCGAGAG...ATTCTGTGTCGATTCTTGTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 90 bp TGGAGGGCTACTAATTTCTTAAAGTTAACTTTCTTTCCAGCCTCTTaGCTGGAGCTTTTTATCAGCTGCATCTGTTCTCTCGGAAAATAT +
Preference number: 2 (lower is better)
Translates to: WRATNFLKLTFFPAS*LELFISCICSLGKY
Trigger: ATATTTTCCGAGAGAACAGATGCAGCTGATAAAAAGCTCCAGCAAAGAGGCTGGAAAGAAAGTTAACTTTAAGAAATTAGTAGCCCTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 90 bp AATAGCAGTCCATTTCTTCTAAGAAGGAAATTACATGCAGTAACCTaGATTTCTTTGTCTCTTTTCTTTGTCATGAAGGGGACCTGGAGC +
Preference number: 2 (lower is better)
Translates to: NSSPFLLRRKLHAVT*ISLSLFFVMKGTWS
Trigger: GCTCCAGGTCCCCTTCATGACAAAGAAAAGAGACAAAGAAATCAAGGTTACTGCATGTAATTTCCTTCTTAGAAGAAATGGACTGCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp CACCACTTATACAGTGGAAAGATTTGTCATTTTTCTTCAACTGTAGCAGACAATGGACACTTGATGCACTaGTCCATATCTCCATCAGTT +
Preference number: 2 (lower is better)
Translates to: HHLYSGKICHFSSTVADNGHLMH*SISPSV
Trigger: AACTGATGGAGATATGGATCAGTGCATCAAGTGTCC...ATTGTCTGCTACAGTTGAAGAAAAATGACAAATCTTTCCACTGTATAAGTGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CCTCAAACAAGACAAGAGCTTATCTTTCTCATCTATGGATATCAGGAAAATTTCGAGGCCCATTGGTCATaGAAACTTTATATGCCTCAG +
Preference number: 2 (lower is better)
Translates to: PQTRQELIFLIYGYQENFEAHWS*KLYMPQ
Trigger: CTGAGGCATATAAAGTTTGCATGACCAATGGGCCTC...GAAATTTTCCTGATATCCATAGATGAGAAAGATAAGCTCTTGTCTTGTTTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp GGGCAGGCCTCTCAGGAATATCAACTCAATATAACACACCAAGATGCAATAAACTACAGATCTTTCACTTaGTTGCTTATTGTTACACCA +
Preference number: 2 (lower is better)
Translates to: GQASQEYQLNITHQDAINYRSFT*LLIVTP
Trigger: TGGTGTAACAATAAGCAAGCAAGTGAAAGATCTGTA...GTTTATTGCATCTTGGTGTGTTATATTGAGTTGATATTCCTGAGAGGCCTGCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp AATTTGCGAAACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGGGTATGGGGTACTTTTaGGATAGCATTGGAAATGTA +
Preference number: 2 (lower is better)
Translates to: NLRNMKLKKNEDQSVDTLGMGYF*DSIGNV
Trigger: TACATTTCCAATGCTATCCCAAAAGTACCCCATACC...CAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTTTCGCAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp AATTTGCGAAACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGGGAACAAAACACCCATaGAAAGAGTTACAGAGACAA +
Preference number: 2 (lower is better)
Translates to: NLRNMKLKKNEDQSVDTLGTKHP*KELQRQ
Trigger: TTGTCTCTGTAACTCTTTCCATGGGTGTTTTGTTCC...CAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTTTCGCAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 90 bp CACGGGAAATCTTTCCATCTTCTGAAGTCTTCTTTGATTTCTTCTTaGATGTATTTGAGTCCTTGTCATACAGATCTTTCACTTGCTTGC +
Preference number: 2 (lower is better)
Translates to: HGKSFHLLKSSLISS*MYLSPCHTDLSLAC
Trigger: GCAAGCAAGTGAAAGATCTGTATGACAAGGACTCAAATACATCAAAGAAGAAATCAAAGAAGACTTCAGAAGATGGAAAGATTTCCCGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 90 bp CCTTTCCATAGGCACGGGAAATCTTTCCATCTTCTGAAGTCTTCTTaGATTTCTTCTTTGATGTATTTGAGTCCTTGTCATACAGATCTT +
Preference number: 2 (lower is better)
Translates to: PFHRHGKSFHLLKSS*ISSLMYLSPCHTDL
Trigger: AAGATCTGTATGACAAGGACTCAAATACATCAAAGAAGAAATCAAAGAAGACTTCAGAAGATGGAAAGATTTCCCGTGCCTATGGAAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp GCTAGAACTATTTCCAATTTCATGAGAAACTGCCAAACTGATTTCCAAAGTGGCGTTTTTAACCATGGGTaGGAAATGACTTCTTCCATT +
Preference number: 2 (lower is better)
Translates to: ARTISNFMRNCQTDFQSGVFNHG*EMTSSI
Trigger: AATGGAAGAAGTCATTTCTCACCCATGGTTAAAAAC...GCCACTTTGGAAATCAGTTTGGCAGTTTCTCATGAAATTGGAAATAGTTCTAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp CACCACTTATACAGTGGAAAGATTTGTCATTTTTCTTCAACTGTAGCAGACAATCCATTAACCACACAGTaGTTTCAGCAGTTTCCCAAT +
Preference number: 2 (lower is better)
Translates to: HHLYSGKICHFSSTVADNPLTTQ*FQQFPN
Trigger: ATTGGGAAACTGCTGAAATCACTGTGTGGTTAATGG...ATTGTCTGCTACAGTTGAAGAAAAATGACAAATCTTTCCACTGTATAAGTGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp TCTTTGATGTATTTGAGTCCTTGTCATACAGATCTTTCACTTGCTTGCTTATTGCCATTAACCACACAGTaGTTTCAGCAGTTTCCCAAT +
Preference number: 2 (lower is better)
Translates to: SLMYLSPCHTDLSLACLLPLTTQ*FQQFPN
Trigger: ATTGGGAAACTGCTGAAATCACTGTGTGGTTAATGG...CAATAAGCAAGCAAGTGAAAGATCTGTATGACAAGGACTCAAATACATCAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CCTCAAACAAGACAAGAGCTTATCTTTCTCATCTATGGATATCAGGAAAATTTCTCTTTTGTGAGACTATaGCATGGCCTAGCAAACACA +
Preference number: 2 (lower is better)
Translates to: PQTRQELIFLIYGYQENFSFVRL*HGLANT
Trigger: TGTGTTTGCTAGGCCATGGCATAGTCTCACAAAAGA...GAAATTTTCCTGATATCCATAGATGAGAAAGATAAGCTCTTGTCTTGTTTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CTGCAAATATACAGAGTATCATTATTACTGTCAGGAATTGCAGCTTGTCAATGGAGGCAGGGTTTTTCATaGATAGTGCCAGTGTTATTT +
Preference number: 2 (lower is better)
Translates to: LQIYRVSLLLSGIAACQWRQGFS*IVPVLF
Trigger: AAATAACACTGGCACTATGCATGAAAAACCCTGCCT...CCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTGTATATTTGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CCTCAAACAAGACAAGAGCTTATCTTTCTCATCTATGGATATCAGGAAAATTTCTGGAAGAGAGATTTATaGTCTACATCCTTGCCAGCA +
Preference number: 2 (lower is better)
Translates to: PQTRQELIFLIYGYQENFWKRDL*STSLPA
Trigger: TGCTGGCAAGGATGTAGAGCATAAATCTCTCTTCCA...GAAATTTTCCTGATATCCATAGATGAGAAAGATAAGCTCTTGTCTTGTTTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CCTCAAACAAGACAAGAGCTTATCTTTCTCATCTATGGATATCAGGAAAATTTCCTCATGTTCTGTGATTaGTGCTTCAGTCTGTGTGAA +
Preference number: 2 (lower is better)
Translates to: PQTRQELIFLIYGYQENFLMFCD*CFSLCE
Trigger: TTCACACAGACTGAAGCAGCAATCACAGAACATGAG...GAAATTTTCCTGATATCCATAGATGAGAAAGATAAGCTCTTGTCTTGTTTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp TCTTTGATGTATTTGAGTCCTTGTCATACAGATCTTTCACTTGCTTGCTTATTGTCACAAGCTACAACTTaGGTTTGCCCTTGGAATGAT +
Preference number: 2 (lower is better)
Translates to: SLMYLSPCHTDLSLACLLSQATT*VCPWND
Trigger: ATCATTCCAAGGGCAAACCCAAGTTGTAGCTTGTGA...CAATAAGCAAGCAAGTGAAAGATCTGTATGACAAGGACTCAAATACATCAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CACCACTTATACAGTGGAAAGATTTGTCATTTTTCTTCAACTGTAGCAGACAATCAGACAAGACAGAGATaGAACCAAGACAGTATTCTG +
Preference number: 2 (lower is better)
Translates to: HHLYSGKICHFSSTVADNQTRQR*NQDSIL
Trigger: CAGAATACTGTCTTGGTTCCATCTCTGTCTTGTCTG...ATTGTCTGCTACAGTTGAAGAAAAATGACAAATCTTTCCACTGTATAAGTGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 90 bp TCAATATATGTGTGCATTTATTTCTTTGTCGTTGATTCAATTCCATaGATCAATGTGTGCTATGGCTCTGTGGTACAACTTGAGGACAAG +
Preference number: 2 (lower is better)
Translates to: SIYVCIYFFVVDSIP*INVCYGSVVQLEDK
Trigger: CTTGTCCTCAAGTTGTACCACAGAGCCATAGCACACATTGATCAATGGAATTGAATCAACGACAAAGAAATAAATGCACACATATATTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp CTGCAAATATACAGAGTATCATTATTACTGTCAGGAATTGCAGCTTGTCAATGGAGCAATTCTAACTTGTaGAGGCTTTGTTTACTGTGT +
Preference number: 2 (lower is better)
Translates to: LQIYRVSLLLSGIAACQWSNSNL*RLCLLC
Trigger: ACACAGTAAACAAAGCCTTCACAAGTTAGAATTGCT...CCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTGTATATTTGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp CACCACTTATACAGTGGAAAGATTTGTCATTTTTCTTCAACTGTAGCAGACAATCTAGCAAGATTTTGCTaGAAGGACCTTGATATAGCT +
Preference number: 2 (lower is better)
Translates to: HHLYSGKICHFSSTVADNLARFC*KDLDIA
Trigger: AGCTATATCAAGGTCCTTTCAGCAAAATCTTGCTAG...ATTGTCTGCTACAGTTGAAGAAAAATGACAAATCTTTCCACTGTATAAGTGGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp CTGCAAATATACAGAGTATCATTATTACTGTCAGGAATTGCAGCTTGTCAATGGATGCCAATTCCTCTCTaGAGTCCAGTATTATCTATA +
Preference number: 2 (lower is better)
Translates to: LQIYRVSLLLSGIAACQWMPIPL*SPVLSI
Trigger: TATAGATAATACTGGACTTCAGAGAGGAATTGGCAT...CCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTGTATATTTGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CACCACTTATACAGTGGAAAGATTTGTCATTTTTCTTCAACTGTAGCAGACAATAGGCAGGGTTTTTCATaGATAGTGCCAGTGTTATTT +
Preference number: 2 (lower is better)
Translates to: HHLYSGKICHFSSTVADNRQGFS*IVPVLF
Trigger: AAATAACACTGGCACTATGCATGAAAAACCCTGCCT...ATTGTCTGCTACAGTTGAAGAAAAATGACAAATCTTTCCACTGTATAAGTGGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp CCTCAAACAAGACAAGAGCTTATCTTTCTCATCTATGGATATCAGGAAAATTTCGAGATTTCTGTTATTTaGTCTGACAATGGGTGTGTC +
Preference number: 2 (lower is better)
Translates to: PQTRQELIFLIYGYQENFEISVI*SDNGCV
Trigger: GACACACCCATTGTCAGAGCAAATAACAGAAATCTC...GAAATTTTCCTGATATCCATAGATGAGAAAGATAAGCTCTTGTCTTGTTTGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp TCTTTGATGTATTTGAGTCCTTGTCATACAGATCTTTCACTTGCTTGCTTATTGGGTATGGGGTACTTTTaGGATAGCATTGGAAATGTA +
Preference number: 2 (lower is better)
Translates to: SLMYLSPCHTDLSLACLLGMGYF*DSIGNV
Trigger: TACATTTCCAATGCTATCCCAAAAGTACCCCATACC...CAATAAGCAAGCAAGTGAAAGATCTGTATGACAAGGACTCAAATACATCAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CCTCAAACAAGACAAGAGCTTATCTTTCTCATCTATGGATATCAGGAAAATTTCATATGTAACAGAGTTTaGCCTAGTAGGCCATCAATG +
Preference number: 2 (lower is better)
Translates to: PQTRQELIFLIYGYQENFICNRV*PSRPSM
Trigger: CATTGATGGCCTACTAGGCCAAACTCTGTTACATAT...GAAATTTTCCTGATATCCATAGATGAGAAAGATAAGCTCTTGTCTTGTTTGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp CCTCAAACAAGACAAGAGCTTATCTTTCTCATCTATGGATATCAGGAAAATTTCATGATATGTTCTCACTaGCAAGTGGATATTAGCTCA +
Preference number: 2 (lower is better)
Translates to: PQTRQELIFLIYGYQENFMICSH*QVDISS
Trigger: TGAGCTAATATCCACTTGTCAGTGAGAACATATCAT...GAAATTTTCCTGATATCCATAGATGAGAAAGATAAGCTCTTGTCTTGTTTGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR TCA 90 bp CCTCAAACAAGACAAGAGCTTATCTTTCTCATCTATGGATATCAGGAAAATTTCCTTCTCTACTCACATTaGTTTCAGAGCTTTAGCAAT +
Preference number: 2 (lower is better)
Translates to: PQTRQELIFLIYGYQENFLLYSH*FQSFSN
Trigger: ATTGCTAAAGCTCTGAAATCAATGTGAGTAGAGAAG...GAAATTTTCCTGATATCCATAGATGAGAAAGATAAGCTCTTGTCTTGTTTGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp TCTTTGATGTATTTGAGTCCTTGTCATACAGATCTTTCACTTGCTTGCTTATTGGGTACAATATTGCAGTaGACAAACACTCTCTTTAGT +
Preference number: 2 (lower is better)
Translates to: SLMYLSPCHTDLSLACLLGTILQ*TNTLFS
Trigger: ACTAAAGAGAGTGTTTGTGCACTGCAATATTGTACC...CAATAAGCAAGCAAGTGAAAGATCTGTATGACAAGGACTCAAATACATCAAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR GCA 90 bp TCTTTGATGTATTTGAGTCCTTGTCATACAGATCTTTCACTTGCTTGCTTATTGTATAAAGAGAAAAGATaGAGTGGCCCTGTCTCTAAT +
Preference number: 2 (lower is better)
Translates to: SLMYLSPCHTDLSLACLLYKEKR*SGPVSN
Trigger: ATTAGAGACAGGGCCACTGCATCTTTTCTCTTTATA...CAATAAGCAAGCAAGTGAAAGATCTGTATGACAAGGACTCAAATACATCAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CCA 90 bp CTGCAAATATACAGAGTATCATTATTACTGTCAGGAATTGCAGCTTGTCAATGGGAAGGCATGAGAATATaGAAATTGTTCTTATCCTCA +
Preference number: 2 (lower is better)
Translates to: LQIYRVSLLLSGIAACQWEGMRI*KLFLSS
Trigger: TGAGGATAAGAACAATTTCCATATTCTCATGCCTTC...CCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTGTATATTTGCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp CTCACACCTCCCTCCTTCTTCCCCAGAAACACTCGCTaGTGCATGTCTCCTAAGGGCAGGCCTCTCAGGAAT +
Preference number: 3 (lower is better)
Translates to: LTPPSFFPRNTR*CMSPKGRPLRN
Trigger: ATTCCTGAGAGGCCTGCCCTTAGGAGACATGCAGCAGCGAGTGTTTCTGGGGAAGAAGGAGGGAGGTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp CTCCCTCCTTCTTCCCCAGAAACACTCGCTGCTGCATGTCTCCTAAGGGCAGGCTGGTGGGAGGGTAAGTaGAGATGTGTTCGACATGGA +
Preference number: 3 (lower is better)
Translates to: LPPSSPETLAAACLLRAGWWEGK*RCVRHG
Trigger: TCCATGTCGAACACATCTCAACTTACCCTCCCACCA...GCCTGCCCTTAGGAGACATGCAGCAGCGAGTGTTTCTGGGGAAGAAGGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp ACACCTCCCTCCTTCTTCCCCAGAAACACTCGCTGCTaGATGTCTCCTAAGGGCAGGCCTCTCAGGAATATC +
Preference number: 3 (lower is better)
Translates to: TPPSFFPRNTRC*MSPKGRPLRNI
Trigger: GATATTCCTGAGAGGCCTGCCCTTAGGAGACATGCAGCAGCGAGTGTTTCTGGGGAAGAAGGAGGGAGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp CTCACAAGGACGGGTACACCTGAGTGGCAGGCCAGCGCTGAAAGAGAGGGAAACTCTCCAACTTGCTTCTaGGTCATGATGTTTGTGCAG +
Preference number: 3 (lower is better)
Translates to: LTRTGTPEWQASAEREGNSPTCF*VMMFVQ
Trigger: CTGCACAAACATCATGACCAAGAAGCAAGTTGGAGA...GTTTCCCTCTCTTTCAGCGCTGGCCTGCCACTCAGGTGTACCCGTCCTTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp AAAGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGAACTGGAGGCCAGAATaGAAAGAATCTCCACTGCCA +
Preference number: 3 (lower is better)
Translates to: KGGGKPIPANSSLEPSCRNWRPE*KESPLP
Trigger: TGGCAGTGGAGATTCTTTCAATTCTGGCCTCCAGTT...CCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR TCA 72 bp GGCCTAGCAAACACAGAAGTGGATGCTCACAATCAGTaGTTGGATGGATCACAGGGCTCCCAATGGAGGAGC +
Preference number: 3 (lower is better)
Translates to: GLANTEVDAHNQ*LDGSQGSQWRS
Trigger: GCTCCTCCATTGGGAGCCCTGTGATCCATCCAATCACTGATTGTGAGCATCCACTTCTGTGTTTGCTAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp GAGACTATGCTGGGGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGTTATTGGATGGATCACAGGGCCC +
Preference number: 3 (lower is better)
Translates to: ETMLGPSKHRSG*SQSVIGWITGP
Trigger: GGGCCCTGTGATCCATCCAATAACTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCAGCATAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp AAAGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGTTCTTTCCAGCCTCTTaGCTGGAGCTTTTTATCAGC +
Preference number: 3 (lower is better)
Translates to: KGGGKPIPANSSLEPSCRFFPAS*LELFIS
Trigger: GCTGATAAAAAGCTCCAGCAAAGAGGCTGGAAAGAA...CCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp ATTACTGTCAGGAATTGCAGCTTGTCAATGGGATGGATCTCAAGTTGGGCCGGTCTTGAATGGCAGCAGTaGGGAGGCACAGTCAGATGG +
Preference number: 3 (lower is better)
Translates to: ITVRNCSLSMGWISSWAGLEWQQ*GGTVRW
Trigger: CCATCTGACTGTGCCTCCCAACTGCTGCCATTCAAG...ACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp TGGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACGTGGGAGTGGGCAGGTaGAGTAGCAGAATGGAGGAA +
Preference number: 3 (lower is better)
Translates to: WPSWPSLEREAHWSCKHYVGVGR*SSRMEE
Trigger: TTCCTCCATTCTGCTACTCAACCTGCCCACTCCCAC...GTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp AAAGGAGGGGGAAAGCCCATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGATTGTTTTTGCCTCATaGAAGCTCTCTGGTAGCCTT +
Preference number: 3 (lower is better)
Translates to: KGGGKPIPANSSLEPSCRIVFAS*KLSGSL
Trigger: AAGGCTACCAGAGAGCTTCAATGAGGCAAAAACAAT...CCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAATGGGCTTTCCCCCTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR TCA 72 bp AGTAGGCCATCAATGGGAGGAGAGGCCCTGGTCTTGTaGAGATTATATGCCCTACTACAGGGAAATGCCAGG +
Preference number: 3 (lower is better)
Translates to: SRPSMGGEALVL*RLYALLQGNAR
Trigger: CCTGGCATTTCCCTGTAGTAGGGCATATAATCTTCACAAGACCAGGGCCTCTCCTCCCATTGATGGCCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp CGTCCCCTGAAACTTCCTATCTGCCTGTCAATGCTATaGTTCGCTTTCACCATGGTGGTGCACAGCTTCAAG +
Preference number: 3 (lower is better)
Translates to: RPLKLPICLSML*FAFTMVVHSFK
Trigger: CTTGAAGCTGTGCACCACCATGGTGAAAGCGAAGCATAGCATTGACAGGCAGATAGGAAGTTTCAGGGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp TGCCATCCACCTGAACGTCCCCTGAAACTTCCTATCTaGCTGTCAATGCTATGCTTCGCTTTCACCATGGTG +
Preference number: 3 (lower is better)
Translates to: CHPPERPLKLPI*LSMLCFAFTMV
Trigger: CACCATGGTGAAAGCGAAGCATAGCATTGACAGGCAGATAGGAAGTTTCAGGGGACGTTCAGGTGGATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp AACATCAGGGAAAGGGGGAGATGTTCCCAGCCAGACTaGACAGATGCACACTTGAATGATGGAACCACAGCA +
Preference number: 3 (lower is better)
Translates to: NIRERGRCSQPD*TDAHLNDGTTA
Trigger: TGCTGTGGTTCCATCATTCAAGTGTGCATCTGTGCAGTCTGGCTGGGAACATCTCCCCCTTTCCCTGATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR CCA 72 bp AGGAATTGCAGCTTGTCAATGGGATGGATCTCAAGTTaGGCCGGTTATTGGTTGGGCGTTCTCTCAGTCTCC +
Preference number: 3 (lower is better)
Translates to: RNCSLSMGWISS*AGYWLGVLSVS
Trigger: GGAGACTGAGAGAACGCCCAACCAATAACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACAAGCTCTATCCACTGTTaGTCTGTGGGTGTCTGCCTC +
Preference number: 3 (lower is better)
Translates to: GLVGHHWKERLTGHANITSSIHC*SVGVCL
Trigger: GAGGCAGACACCCACAGACAAACAGTGGATAGAGCT...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAATGGAACTGCAACCCTATAGATAGGGGGAAAGGCCCCTaGTGGGTGAGACCATCTCTA +
Preference number: 3 (lower is better)
Translates to: GGAREITQGAKWNCNPIDRGKGP*WVRPSL
Trigger: TAGAGATGGTCTCACCCACAAGGGGCCTTTCCCCCT...ATCTATAGGGTTGCAGTTCCATTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR TCA 72 bp ATTCCTGCCAATTCATCCTTGGAGCCCAGCTGCAGGTaGCCACGTGTAGGATCTGATGTAGTCTCCAGAATA +
Preference number: 3 (lower is better)
Translates to: IPANSSLEPSCR*PRVGSDVVSRI
Trigger: TATTCTGGAGACTACATCAGATCCTACACGTGGTCACCTGCAGCTGGGCTCCAAGGATGAATTGGCAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 72 bp GAAGCAGCCTCTCCAGGCTCCATATCATCAATGCTATaGGTAACAGCTAAGGACACCCCTCCCCCATTGATT +
Preference number: 3 (lower is better)
Translates to: EAASPGSISSML*VTAKDTPPPLI
Trigger: AATCAATGGGGGAGGGGTGTCCTTAGCTGTTACTCATAGCATTGATGATATGGAGCCTGGAGAGGCTGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 72 bp AATAAACACGCCAAGCCTCGACAAGGCCACCCTGTATaGGAAAAGGGAACCACAGACCAGGCAACAGAATCA +
Preference number: 3 (lower is better)
Translates to: NKHAKPRQGHPV*EKGTTDQATES
Trigger: TGATTCTGTTGCCTGGTCTGTGGTTCCCTTTTCTCATACAGGGTGGCCTTGTCGAGGCTTGGCGTGTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp GAGACTATGCCATGGCCTAGCAAACACAGAAGTGGATaGTCACAATCAGTGATTGGATGGATCACAGGGCTC +
Preference number: 3 (lower is better)
Translates to: ETMPWPSKHRSG*SQSVIGWITGL
Trigger: GAGCCCTGTGATCCATCCAATCACTGATTGTGAGCATCCACTTCTGTGTTTGCTAGGCCATGGCATAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 72 bp AGTCAGGGTAAATCGGGGGTTGAAAGGCTTTGTGGATaGGTTGGTGTTGCTATCACTACACCAGGGTTCCAA +
Preference number: 3 (lower is better)
Translates to: SQGKSGVERLCG*VGVAITTPGFQ
Trigger: TTGGAACCCTGGTGTAGTGATAGCAACACCAACCCATCCACAAAGCCTTTCAACCCCCGATTTACCCTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp TCTAGAAGCTGGAAAGAACCCAGATGTCCCTCAACACAAGAATCGACACAGAATGTGGGAGTGGGCAGGTaGAGTAGCAGAATGGAGGAA +
Preference number: 3 (lower is better)
Translates to: SRSWKEPRCPSTQESTQNVGVGR*SSRMEE
Trigger: TTCCTCCATTCTGCTACTCAACCTGCCCACTCCCAC...ATTCTGTGTCGATTCTTGTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp TGGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACCCAGTCCTGACTTCCTaGGTGATAAACAGCAGCATG +
Preference number: 3 (lower is better)
Translates to: WPSWPSLEREAHWSCKHYPVLTS*VINSSM
Trigger: CATGCTGCTGTTTATCACCAAGGAAGTCAGGACTGG...GTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR TCA 72 bp CCTCCTGCCCTCTGCCTTCCATTACCATTATATTCCTaGTTCCAAGTGAACCTCAAACATCCTTGCTTGGCC +
Preference number: 3 (lower is better)
Translates to: PPALCLPLPLYS*FQVNLKHPCLA
Trigger: GGCCAAGCAAGGATGTTTGAGGTTCACTTGGAATCAGGAATATAATGGTAATGGAAGGCAGAGGGCAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 72 bp GGAGATGTTCCCAGCCAGACTGCACAGATGCACACTTaGATGATGGAACCACAGCAGACTATGGCATTTGAA +
Preference number: 3 (lower is better)
Translates to: GDVPSQTAQMHT*MMEPQQTMAFE
Trigger: TTCAAATGCCATAGTCTGCTGTGGTTCCATCATTCAAGTGTGCATCTGTGCAGTCTGGCTGGGAACATCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR GCA 72 bp TTAGGCTACTTTATCGAAAGTCACATGTCAATATGTTaGGAGTCGTCCAGCGGCTCACAAGGACGGGTACAC +
Preference number: 3 (lower is better)
Translates to: LGYFIESHMSIC*ESSSGSQGRVH
Trigger: GTGTACCCGTCCTTGTGAGCCGCTGGACGACTCGCAACATATTGACATGTGACTTTCGATAAAGTAGCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp TCATTACACCAGAGGATGATTTGCCCAAACTCTGAGTaGATGTCAACATCAGGGAAAGGGGGAGATGTTCCC +
Preference number: 3 (lower is better)
Translates to: SLHQRMICPNSE*MSTSGKGGDVP
Trigger: GGGAACATCTCCCCCTTTCCCTGATGTTGACATGCACTCAGAGTTTGGGCAAATCATCCTCTGGTGTAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR CCA 72 bp AACTCTGCGAGTGAACAGCAAGCACACCATAAAGCCTaGCTGTATCTTCTACCCACTGATGTGTGGGATATC +
Preference number: 3 (lower is better)
Translates to: NSASEQQAHHKA*LYLLPTDVWDI
Trigger: GATATCCCACACATCAGTGGGTAGAAGATACAGCCAGGCTTTATGGTGTGCTTGCTGTTCACTCGCAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 72 bp GTCTCTAGCTGCATATGTATCAAAAGATGGCCTAGTTaGCCATCAGTGGAAAGAGAGGCCCATTGGTCATGC +
Preference number: 3 (lower is better)
Translates to: VSSCICIKRWPS*PSVEREAHWSC
Trigger: GCATGACCAATGGGCCTCTCTTTCCACTGATGGCCAACTAGGCCATCTTTTGATACATATGCAGCTAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 72 bp TGGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTaGTCATGCAAACATTACATGTGTCAGAACAGGGGA +
Preference number: 3 (lower is better)
Translates to: WPSWPSLEREAH*SCKHYMCQNRG
Trigger: TCCCCTGTTCTGACACATGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp GAAATGCACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATTCACTCTCATGGGAACCTCAAACATCCTaGCTTGGCCCTCCATCATGT +
Preference number: 3 (lower is better)
Translates to: EMHSMPPPLLADFHSLSWEPQTS*LGPPSC
Trigger: ACATGATGGAGGGCCAAGCAAGGATGTTTGAGGTTC...CCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp ATTACTGTCAGGAATTGCAGCTTGTCAATGGGATGGATCTCAAGTTGGGCCGGTGTTCTTTCCATGAGCTaGACAAACTGCTTAGCAGCT +
Preference number: 3 (lower is better)
Translates to: ITVRNCSLSMGWISSWAGVLSMS*TNCLAA
Trigger: AGCTGCTAAGCAGTTTGTCAAGCTCATGGAAAGAAC...ACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp CCAGCCTCTTTGCTGGAGCTTTTTATCAGCTGCATCTGTTCTCTCGGAAAATATGAACCTCAAACATCCTaGCTTGGCCCTCCATCATGT +
Preference number: 3 (lower is better)
Translates to: PASLLELFISCICSLGKYEPQTS*LGPPSC
Trigger: ACATGATGGAGGGCCAAGCAAGGATGTTTGAGGTTC...ATATTTTCCGAGAGAACAGATGCAGCTGATAAAAAGCTCCAGCAAAGAGGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp GAGCTCATGTCTCTAGTTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATGGCTTTGTGGATGGGTaGGTGTTGCTATCACTACAC +
Preference number: 3 (lower is better)
Translates to: ELMSLVAYVSEDGLVGHHGFVDG*VLLSLH
Trigger: GTGTAGTGATAGCAACACCAACCCATCCACAAAGCC...ATGATGGCCAACTAGGCCATCTTCTGATACATATGCAACTAGAGACATGAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp TGGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACAAGAGAGAAAACTTGTaGCTTTGGCCTCTCTGTGTC +
Preference number: 3 (lower is better)
Translates to: WPSWPSLEREAHWSCKHYKRENL*LWPLCV
Trigger: GACACAGAGAGGCCAAAGCAACAAGTTTTCTCTCTT...GTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 72 bp GTCAGTTATTGGATGGATCACAGGGCCCCCAATGGATaGGCTAGAGAAAGTACTCAAGTAGCTAAAGGGATC +
Preference number: 3 (lower is better)
Translates to: VSYWMDHRAPNG*ARESTQVAKGI
Trigger: GATCCCTTTAGCTACTTGAGTACTTTCTCTAGCTCATCCATTGGGGGCCCTGTGATCCATCCAATAACTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 72 bp ATGTTCCCAGCCAGACTGCACAGATGCACACTTGAATaGTGGAACCACAGCAGACTATGGCATTTGAAAGTC +
Preference number: 3 (lower is better)
Translates to: MFPARLHRCTLE*WNHSRLWHLKV
Trigger: GACTTTCAAATGCCATAGTCTGCTGTGGTTCCATCATTCAAGTGTGCATCTGTGCAGTCTGGCTGGGAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR GCA 72 bp GCCTGTCAATGCTATGCTTCGCTTTCACCATGGTGGTaGACAGCTTCAAGAGAGAAACTGGCTCAAATAACA +
Preference number: 3 (lower is better)
Translates to: ACQCYASLSPWW*TASREKLAQIT
Trigger: TGTTATTTGAGCCAGTTTCTCTCTTGAAGCTGTGCACCACCATGGTGAAAGCGAAGCATAGCATTGACAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp CTTCCCCTATCTCAAGTCTCTTTCTCTTCCTGGAAATaGACTCTATGCCTCCTCCATTGCTTGCAGATTTCC +
Preference number: 3 (lower is better)
Translates to: LPLSQVSFSSWK*TLCLLHCLQIS
Trigger: GGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTCCAGGAAGAGAAAGAGACTTGAGATAGGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 72 bp TCTGCCTGTCAATGCTATGCTTCGCTTTCACCATGGTaGTGCACAGCTTCAAGAGAGAAACTGGCTCAAATA +
Preference number: 3 (lower is better)
Translates to: SACQCYASLSPW*CTASREKLAQI
Trigger: TATTTGAGCCAGTTTCTCTCTTGAAGCTGTGCACCACCATGGTGAAAGCGAAGCATAGCATTGACAGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 72 bp AGAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGATaGCCTAGTTGGCCATCAGTGGAAAGAGAGGCCCAT +
Preference number: 3 (lower is better)
Translates to: RALVSSCICIKR*PSWPSVEREAH
Trigger: ATGGGCCTCTCTTTCCACTGATGGCCAACTAGGCCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 72 bp GTCTCTAGTTGCATATGTATCAGAAGATGGCCTAGTTaGCCATCATTGGAAAGAGAGGCTCACTGGTCATGC +
Preference number: 3 (lower is better)
Translates to: VSSCICIRRWPS*PSLEREAHWSC
Trigger: GCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCCATCTTCTGATACATATGCAACTAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 72 bp AAGTCGTGTCACCATCCACATTTGCAATGTGCTTCCTaGTTTGATGGCTGTGAAGGCCACAACCACAATGAA +
Preference number: 3 (lower is better)
Translates to: KSCHHPHLQCAS*FDGCEGHNHNE
Trigger: TTCATTGTGGTTGTGGCCTTCACAGCCATCAAACCAGGAAGCACATTGCAAATGTGGATGGTGACACGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR CCA 72 bp TGGAGGCCAGAATTGAAAGAATCTCCACTGCCACCATaGTTTTACCTTTGGAGCTCAGGTAAGTGGGTACAA +
Preference number: 3 (lower is better)
Translates to: WRPELKESPLPP*FYLWSSGKWVQ
Trigger: TTGTACCCACTTACCTGAGCTCCAAAGGTAAAACCATGGTGGCAGTGGAGATTCTTTCAATTCTGGCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR TCA 72 bp CATTATCCCTCCCTTATCCTCTCTCACATTCTTCTCTaGAAGGGTAGGCAACCATGGTACTTCAAGTCTCTG +
Preference number: 3 (lower is better)
Translates to: HYPSLILSHILL*KGRQPWYFKSL
Trigger: CAGAGACTTGAAGTACCATGGTTGCCTACCCTTTCAGAGAAGAATGTGAGAGAGGATAAGGGAGGGATAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTaGCTGCCCCTATGTCTAGTTTCCAAAGAGGAAAAA +
Preference number: 3 (lower is better)
Translates to: VCVCVCVCVCVF*LPLCLVSKEEK
Trigger: TTTTTCCTCTTTGGAAACTAGACATAGGGGCAGGCAAAACACACACACACACACACACACACACACACACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp CTCTCAGGAATATCAACTCAATATAACACACCAAGATaGAATAAACACGCCAAGCCTCGACAAGGCCACCCT +
Preference number: 3 (lower is better)
Translates to: LSGISTQYNTPR*NKHAKPRQGHP
Trigger: AGGGTGGCCTTGTCGAGGCTTGGCGTGTTTATTGCATCTTGGTGTGTTATATTGAGTTGATATTCCTGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 72 bp CAAAGTGGCTATATTACCTGTCACTCCCACCAGCAATaGAAGAGAGATTTATGCTCTACATCCTTGCCAGCA +
Preference number: 3 (lower is better)
Translates to: QSGYITCHSHQQ*KRDLCSTSLPA
Trigger: TGCTGGCAAGGATGTAGAGCATAAATCTCTCTTCCATTGCTGGTGGGAGTGACAGGTAATATAGCCACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 72 bp ATTATTACTGTCAGGAATTGCAGCTTGTCAATGGGATaGATCTCAAGTTGGGCCGGTTATTGGTTGGGCGTT +
Preference number: 3 (lower is better)
Translates to: IITVRNCSLSMG*ISSWAGYWLGV
Trigger: AACGCCCAACCAATAACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 72 bp GAATATGTAACAGAGTTTGGCCTAGTAGGCCATCAATaGGAGGAGAGGCCCTGGTCTTGTGAAGATTATATG +
Preference number: 3 (lower is better)
Translates to: EYVTEFGLVGHQ*EERPWSCEDYM
Trigger: CATATAATCTTCACAAGACCAGGGCCTCTCCTCCCATTGATGGCCTACTAGGCCAAACTCTGTTACATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp TGGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACCTTGAACCTCATATCTaGGTCCACATTTACCTTCAA +
Preference number: 3 (lower is better)
Translates to: WPSWPSLEREAHWSCKHYLEPHI*VHIYLQ
Trigger: TTGAAGGTAAATGTGGACCAAGATATGAGGTTCAAG...GTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp CTGCAAATATACAGAGTATCATTATTACTGTCAGGAATTGCAGCTTGTCAATGGCTTGAATGGCAGCAGTaGGGAGGCACAGTCAGATGG +
Preference number: 3 (lower is better)
Translates to: LQIYRVSLLLSGIAACQWLEWQQ*GGTVRW
Trigger: CCATCTGACTGTGCCTCCCAACTGCTGCCATTCAAG...CCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTGTATATTTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp GAGCTCATGTCTCTAGTTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATAAGAGAGAAAACTTGTaGCTTTGGCCTCTCTGTGTC +
Preference number: 3 (lower is better)
Translates to: ELMSLVAYVSEDGLVGHHKRENL*LWPLCV
Trigger: GACACAGAGAGGCCAAAGCAACAAGTTTTCTCTCTT...ATGATGGCCAACTAGGCCATCTTCTGATACATATGCAACTAGAGACATGAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 72 bp CATGAGCTTGACAAACTGCTTAGCAGCTTTTCAGAGTaGAGACTCCTCCTCTTTAAAGTGGTAAGACCCTAC +
Preference number: 3 (lower is better)
Translates to: HELDKLLSSFSE*RLLLFKVVRPY
Trigger: GTAGGGTCTTACCACTTTAAAGAGGAGGAGTCTTCACTCTGAAAAGCTGCTAAGCAGTTTGTCAAGCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 72 bp ACCCATGGAAAGAGTTACAGAGACAAAGTTTGGAGCTaGGACAAAAGGATGCACCATCTAGAGACTGCCATA +
Preference number: 3 (lower is better)
Translates to: THGKSYRDKVWS*DKRMHHLETAI
Trigger: TATGGCAGTCTCTAGATGGTGCATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCTTTCCATGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 72 bp TGGCAGCAGTTGGGAGGCACAGTCAGATGGTATCTTTaGGTTAAAGGCCATAGAAGGCAAACTATGATTGAA +
Preference number: 3 (lower is better)
Translates to: WQQLGGTVRWYL*VKGHRRQTMIE
Trigger: TTCAATCATAGTTTGCCTTCTATGGCCTTTAACTCAAAGATACCATCTGACTGTGCCTCCCAACTGCTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 72 bp TATTGGTTGGGCGTTCTCTCAGTCTCCACTCTATCATaGATCCCTCTATTTCATGTAGTCAGGGTAAATCGG +
Preference number: 3 (lower is better)
Translates to: YWLGVLSVSTLS*IPLFHVVRVNR
Trigger: CCGATTTACCCTGACTACATGAAATAGAGGGATTCATGATAGAGTGGAGACTGAGAGAACGCCCAACCAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 72 bp AAGCCCTTATTTGTTCTCTGGCTGTGGTTCAGCTTTTaGGAGCTCCAAGGTTTCAGGTTAGTTGATTCGGTT +
Preference number: 3 (lower is better)
Translates to: KPLFVLWLWFSF*ELQGFRLVDSV
Trigger: AACCGAATCAACTAACCTGAAACCTTGGAGCTCTCAAAAGCTGAACCACAGCCAGAGAACAAATAAGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp AACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTaGCCCTTCTTAGAATTGGGAACAAAACACCCATGG +
Preference number: 3 (lower is better)
Translates to: NSRRTKTKVWTL*PFLELGTKHPW
Trigger: CCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp TTCTCTTCCTGGAAATGCACTCTATGCCTCCTCCATTaGTTGCAGATTTCCATTCACTCTCATGGCTATCAT +
Preference number: 3 (lower is better)
Translates to: FSSWKCTLCLLH*LQISIHSHGYH
Trigger: ATGATAGCCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTCCAGGAAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp ATTGCTGCTTCAGTCTGTGTGAATCCTAGTGAACCCTaGTTAGTTGATGCCACACATTCTCATGTTGTTCTC +
Preference number: 3 (lower is better)
Translates to: IAASVCVNPSEP*LVDATHSHVVL
Trigger: GAGAACAACATGAGAATGTGTGGCATCAACTAAGCAGGGTTCACTAGGATTCACACAGACTGAAGCAGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 72 bp GACCTTGATATAGCTGTCTTTTGTGAGACTATGCCATaGCCTAGCAAACACAGAAGTGGATGCTCACAATCA +
Preference number: 3 (lower is better)
Translates to: DLDIAVFCETMP*PSKHRSGCSQS
Trigger: TGATTGTGAGCATCCACTTCTGTGTTTGCTAGGCCATGGCATAGTCTCACAAAAGACAGCTATATCAAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 72 bp GTATCATTATTACTGTCAGGAATTGCAGCTTGTCAATaGGATGGATCTCAAGTTGGGCCGGTTATTGGTTGG +
Preference number: 3 (lower is better)
Translates to: VSLLLSGIAACQ*DGSQVGPVIGW
Trigger: CCAACCAATAACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAATAATGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 72 bp GCATATGTATCAGAAGATGGCCTAGTTGGCCATCATTaGAAAGAGAGGCTCACTGGTCATGCAAACATTACA +
Preference number: 3 (lower is better)
Translates to: AYVSEDGLVGHH*KERLTGHANIT
Trigger: TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCCATCTTCTGATACATATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACAAAGCTCTTATCCATGTaGTTCTACCTGAATAGTGAA +
Preference number: 3 (lower is better)
Translates to: GLVGHHWKERLTGHANITKLLSM*FYLNSE
Trigger: TTCACTATTCAGGTAGAACAACATGGATAAGAGCTT...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp AAAAAGCTACAGAGGCAAAGTTTGAAGCTGAGACAGAAGGAAAGACCATCCACTTTCTTTCCAGCCTCTTaGCTGGAGCTTTTTATCAGC +
Preference number: 3 (lower is better)
Translates to: KKLQRQSLKLRQKERPSTFFPAS*LELFIS
Trigger: GCTGATAAAAAGCTCCAGCAAAGAGGCTGGAAAGAA...AGTGGATGGTCTTTCCTTCTGTCTCAGCTTCAAACTTTGCCTCTGTAGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp ATTACTGTCAGGAATTGCAGCTTGTCAATGGGATGGATCTCAAGTTGGGCCGGTAGATCTTTCACTTGCTaGCTTATTGTTACACCAAGA +
Preference number: 3 (lower is better)
Translates to: ITVRNCSLSMGWISSWAGRSFTC*LIVTPR
Trigger: TCTTGGTGTAACAATAAGCAAGCAAGTGAAAGATCT...ACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACAATACAGATCTTTCACTaGCTTGCTTATTGTTACACC +
Preference number: 3 (lower is better)
Translates to: GLVGHHWKERLTGHANITIQIFH*LAYCYT
Trigger: GGTGTAACAATAAGCAAGCAAGTGAAAGATCTGTAT...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACATTATGCTCTACATCCTaGCCAGCATATATTATCACT +
Preference number: 3 (lower is better)
Translates to: GLVGHHWKERLTGHANITLCSTS*PAYIIT
Trigger: AGTGATAATATATGCTGGCAAGGATGTAGAGCATAA...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp TCTAGAAGCTGGAAAGAACCCAGATGTCCCTCAACACAAGAATCGACACAGAATTATTACTGTCAGGAATaGCAGCTTGTCAATGGGATG +
Preference number: 3 (lower is better)
Translates to: SRSWKEPRCPSTQESTQNYYCQE*QLVNGM
Trigger: CATCCCATTGACAAGCTGCAATTCCTGACAGTAATA...ATTCTGTGTCGATTCTTGTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp AAAAAGCTACAGAGGCAAAGTTTGAAGCTGAGACAGAAGGAAAGACCATCCACTAGGAAGAGAGAAAACTaGTTGCTTTGGCCTCTCTGT +
Preference number: 3 (lower is better)
Translates to: KKLQRQSLKLRQKERPSTRKREN*LLWPLC
Trigger: ACAGAGAGGCCAAAGCAACAAGTTTTCTCTCTTCCT...AGTGGATGGTCTTTCCTTCTGTCTCAGCTTCAAACTTTGCCTCTGTAGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAATGGAACTGCAACCCTATAGATATAGACAGTAACATGTaGCCAGGAGTCATCAAAGAG +
Preference number: 3 (lower is better)
Translates to: GGAREITQGAKWNCNPIDIDSNM*PGVIKE
Trigger: CTCTTTGATGACTCCTGGCAACATGTTACTGTCTAT...ATCTATAGGGTTGCAGTTCCATTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp CCAGCCTCTTTGCTGGAGCTTTTTATCAGCTGCATCTGTTCTCTCGGAAAATATCAAATAGAGGTCTTTTaGACCAGGAAATGCCATCTG +
Preference number: 3 (lower is better)
Translates to: PASLLELFISCICSLGKYQIEVF*TRKCHL
Trigger: CAGATGGCATTTCCTGGTCAAAAAGACCTCTATTTG...ATATTTTCCGAGAGAACAGATGCAGCTGATAAAAAGCTCCAGCAAAGAGGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR TCA 72 bp CCCTCCATCATGTCCAGATTCTTTGGCTTAGTGGAGTaGAGCATGGGCATCATTATTTTATGGCTAATAACC +
Preference number: 3 (lower is better)
Translates to: PSIMSRFFGLVE*SMGIIILWLIT
Trigger: GGTTATTAGCCATAAAATAATGATGCCCATGCTTCACTCCACTAAGCCAAAGAATCTGGACATGATGGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 72 bp AATTTTCTGAAAGGACCCTCATATAGCTGTCTCTTGTaGGGATATGCTAGTGCCTGGCAAATACAGAAGTGG +
Preference number: 3 (lower is better)
Translates to: NFLKGPSYSCLL*GYASAWQIQKW
Trigger: CCACTTCTGTATTTGCCAGGCACTAGCATATCCTCACAAGAGACAGCTATATGAGGGTCCTTTCAGAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 72 bp ACGCTGACACCATTGCATACACTAGCAAGATTTTGCTaGAAGGACCCTGATATAGCTGTCTTTTGTGAGACT +
Preference number: 3 (lower is better)
Translates to: TLTPLHTLARFC*KDPDIAVFCET
Trigger: AGTCTCACAAAAGACAGCTATATCAGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 72 bp ACAAAGTCGTGGTCTGGTTCATCAAGCTTCAGGTTGTaGGGGGAGGTTACATCAATATATGTGTGCATTTAT +
Preference number: 3 (lower is better)
Translates to: TKSWSGSSSFRL*GEVTSIYVCIY
Trigger: ATAAATGCACACATATATTGATGTAACCTCCCCCCACAACCTGAAGCTTGATGAACCAGACCACGACTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTTTTGCCTGCCCCTATGTCTAGTTTCCAAAGAGGAAGTTCAGCATGCTTTATaGGAAGATGATATGTTTCTC +
Preference number: 3 (lower is better)
Translates to: CVCVCVFCLPLCLVSKEEVQHAL*EDDMFL
Trigger: GAGAAACATATCATCTTCCAATAAAGCATGCTGAAC...TTCCTCTTTGGAAACTAGACATAGGGGCAGGCAAAACACACACACACACACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp GCAAATATACAGAGTATCATTATTACTGTCAGGAATTaGAGCTTGTCAATGGGATGGATCTCAAGTTGGGCC +
Preference number: 3 (lower is better)
Translates to: ANIQSIIITVRN*SLSMGWISSWA
Trigger: GGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTGTATATTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 72 bp TTCACTTTCATAATCAATGCCTTGAATGGCAGCAGTTaGGAGGCACAGTCAGATGGTATCTTTGAGTTAAAG +
Preference number: 3 (lower is better)
Translates to: FTFIINALNGSS*EAQSDGIFELK
Trigger: CTTTAACTCAAAGATACCATCTGACTGTGCCTCCCAACTGCTGCCATTCAAGGCATTGATTATGAAAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 72 bp TCTAGGTATTTTCACTTTCATAATCAATGCCTTGAATaGCAGCAGTTGGGAGGCACAGTCAGATGGTATCTT +
Preference number: 3 (lower is better)
Translates to: SRYFHFHNQCLE*QQLGGTVRWYL
Trigger: AAGATACCATCTGACTGTGCCTCCCAACTGCTGCCATTCAAGGCATTGATTATGAAAGTGAAAATACCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp GAGCTCATGTCTCTAGTTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATAAGCTCTTATCCATGTaGTTCTACCTGAATAGTGAA +
Preference number: 3 (lower is better)
Translates to: ELMSLVAYVSEDGLVGHHKLLSM*FYLNSE
Trigger: TTCACTATTCAGGTAGAACAACATGGATAAGAGCTT...ATGATGGCCAACTAGGCCATCTTCTGATACATATGCAACTAGAGACATGAGCTC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp GGGCAGGCCTCTCAGGAATATCAACTCAATATAACACACCAAGATGCAATAAACGAGCAGCATCATTTGTaGAAGATGCTTTCTTTTTCC +
Preference number: 3 (lower is better)
Translates to: GQASQEYQLNITHQDAINEQHHL*KMLSFS
Trigger: GGAAAAAGAAAGCATCTTCAACAAATGATGCTGCTC...GTTTATTGCATCTTGGTGTGTTATATTGAGTTGATATTCCTGAGAGGCCTGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp CACCACTTATACAGTGGAAAGATTTGTCATTTTTCTTCAACTGTAGCAGACAATGGCTTTGTGGATGGGTaGGTGTTGCTATCACTACAC +
Preference number: 3 (lower is better)
Translates to: HHLYSGKICHFSSTVADNGFVDG*VLLSLH
Trigger: GTGTAGTGATAGCAACACCAACCCATCCACAAAGCC...ATTGTCTGCTACAGTTGAAGAAAAATGACAAATCTTTCCACTGTATAAGTGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp CTGCAAATATACAGAGTATCATTATTACTGTCAGGAATTGCAGCTTGTCAATGGAGGACAAGCCCTTATTaGTTCTCTGGCTGTGGTTCA +
Preference number: 3 (lower is better)
Translates to: LQIYRVSLLLSGIAACQWRTSPY*FSGCGS
Trigger: TGAACCACAGCCAGAGAACAAATAAGGGCTTGTCCT...CCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTGTATATTTGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp CTGCAAATATACAGAGTATCATTATTACTGTCAGGAATTGCAGCTTGTCAATGGGTTCTTTCCATGAGCTaGACAAACTGCTTAGCAGCT +
Preference number: 3 (lower is better)
Translates to: LQIYRVSLLLSGIAACQWVLSMS*TNCLAA
Trigger: AGCTGCTAAGCAGTTTGTCAAGCTCATGGAAAGAAC...CCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTGTATATTTGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp GGGCAGGCCTCTCAGGAATATCAACTCAATATAACACACCAAGATGCAATAAACGTTCAGCATGCTTTATaGGAAGATGATATGTTTCTC +
Preference number: 3 (lower is better)
Translates to: GQASQEYQLNITHQDAINVQHAL*EDDMFL
Trigger: GAGAAACATATCATCTTCCAATAAAGCATGCTGAAC...GTTTATTGCATCTTGGTGTGTTATATTGAGTTGATATTCCTGAGAGGCCTGCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp CTGCAAATATACAGAGTATCATTATTACTGTCAGGAATTGCAGCTTGTCAATGGAGGAAGAGAGAAAACTaGTTGCTTTGGCCTCTCTGT +
Preference number: 3 (lower is better)
Translates to: LQIYRVSLLLSGIAACQWRKREN*LLWPLC
Trigger: ACAGAGAGGCCAAAGCAACAAGTTTTCTCTCTTCCT...CCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTGTATATTTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 72 bp TACCAGAAGTCACCTCTACTTAGCAATTCTAACTTGTaGAGGCTTTGTTTACTGTGTCTGGTCATCTCCAAT +
Preference number: 3 (lower is better)
Translates to: YQKSPLLSNSNL*RLCLLCLVISN
Trigger: ATTGGAGATGACCAGACACAGTAAACAAAGCCTTCACAAGTTAGAATTGCTAAGTAGAGGTGACTTCTGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 72 bp ATCTCTCAGAGCATGTTTTTAACCATGGGTGAGAAATaGCTTCTTCCATTGTCACAAGCTACAACTTGGGTT +
Preference number: 3 (lower is better)
Translates to: ISQSMFLTMGEK*LLPLSQATTWV
Trigger: AACCCAAGTTGTAGCTTGTGACAATGGAAGAAGTCATTTCTCACCCATGGTTAAAAACATGCTCTGAGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp GCTAGAACTATTTCCAATTTCATGAGAAACTGCCAAACTGATTTCCAAAGTGGCCTTGAACCTCATATCTaGGTCCACATTTACCTTCAA +
Preference number: 3 (lower is better)
Translates to: ARTISNFMRNCQTDFQSGLEPHI*VHIYLQ
Trigger: TTGAAGGTAAATGTGGACCAAGATATGAGGTTCAAG...GCCACTTTGGAAATCAGTTTGGCAGTTTCTCATGAAATTGGAAATAGTTCTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp AATTTGCGAAACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGTATAGTGGTACAATATaGCAGTGCACAAACACTCTC +
Preference number: 3 (lower is better)
Translates to: NLRNMKLKKNEDQSVDTLYSGTI*QCTNTL
Trigger: GAGAGTGTTTGTGCACTGCAATATTGTACCACTATA...CAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTTTCGCAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 72 bp TTCCTTGGTGATAAACAGCAGCATGGAATTGTAAGCTaGATAAAACCTTTCTTCTCCAACTTGCTTCTTGGT +
Preference number: 3 (lower is better)
Translates to: FLGDKQQHGIVS*IKPFFSNLLLG
Trigger: ACCAAGAAGCAAGTTGGAGAAGAAAGGTTTTATTCAGCTTACAATTCCATGCTGCTGTTTATCACCAAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR GCA 72 bp AGACTCCTCCTCTTTAAAGTGGTAAGACCCTACAAGTaGTTAGTTGCTGATACCTTTAAAAGAAGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: RLLLFKVVRPYK*LVADTFKRSVS
Trigger: AGAAACACTTCTTTTAAAGGTATCAGCAACTAAGCACTTGTAGGGTCTTACCACTTTAAAGAGGAGGAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp TGCCAGCATATATTATCACTTGAGGTTTTTAATCTTTaGCAGTCTGATCAGTGTAAGACGGAATCTGAGATG +
Preference number: 3 (lower is better)
Translates to: CQHILSLEVFNL*QSDQCKTESEM
Trigger: CATCTCAGATTCCGTCTTACACTGATCAGACTGGCAAAGATTAAAAACCTCAAGTGATAATATATGCTGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp TCTTTCAAACAAATAGAGGTCTTTTTGACCAGGAAATaGCATCTGAGGATCTGTAGTCTCTGTCCTTATAGA +
Preference number: 3 (lower is better)
Translates to: SFKQIEVFLTRK*HLRICSLCPYR
Trigger: TCTATAAGGACAGAGACTACAGATCCTCAGATGGCATTTCCTGGTCAAAAAGACCTCTATTTGTTTGAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR GCA 72 bp ATCTGTAAATTATATGAACTGTATCATCTGTGCATTTaGAGGTCCTGGAGGAATAAGGTTGTAGAGTCAGTG +
Preference number: 3 (lower is better)
Translates to: ICKLYELYHLCI*RSWRNKVVESV
Trigger: CACTGACTCTACAACCTTATTCCTCCAGGACCTGCAAATGCACAGATGATACAGTTCATATAATTTACAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp GCTAGAACTATTTCCAATTTCATGAGAAACTGCCAAACTGATTTCCAAAGTGGCGATGTATTTGAGTCCTaGTCATACAGATCTTTCACT +
Preference number: 3 (lower is better)
Translates to: ARTISNFMRNCQTDFQSGDVFES*SYRSFT
Trigger: AGTGAAAGATCTGTATGACAAGGACTCAAATACATC...GCCACTTTGGAAATCAGTTTGGCAGTTTCTCATGAAATTGGAAATAGTTCTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp CTGCAAATATACAGAGTATCATTATTACTGTCAGGAATTGCAGCTTGTCAATGGGAGCAGCATCATTTGTaGAAGATGCTTTCTTTTTCC +
Preference number: 3 (lower is better)
Translates to: LQIYRVSLLLSGIAACQWEQHHL*KMLSFS
Trigger: GGAAAAAGAAAGCATCTTCAACAAATGATGCTGCTC...CCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTGTATATTTGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp CACCACTTATACAGTGGAAAGATTTGTCATTTTTCTTCAACTGTAGCAGACAATCCTTTCTTCTCCAACTaGCTTCTTGGTCATGATGTT +
Preference number: 3 (lower is better)
Translates to: HHLYSGKICHFSSTVADNPFFSN*LLGHDV
Trigger: AACATCATGACCAAGAAGCAAGTTGGAGAAGAAAGG...ATTGTCTGCTACAGTTGAAGAAAAATGACAAATCTTTCCACTGTATAAGTGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR GCA 72 bp GGAGCTAGAGAAATTACCCAAGGAGCTAAATGGAACTaGAACCCTATAGATGGAAAAACAATATTAAGTAAC +
Preference number: 3 (lower is better)
Translates to: GAREITQGAKWN*NPIDGKTILSN
Trigger: GTTACTTAATATTGTTTTTCCATCTATAGGGTTGCAGTTCCATTTAGCTCCTTGGGTAATTTCTCTAGCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 72 bp AATGGAGGAGCTAGAGAAATTACCCAAGGAGCTAAATaGAACTGCAACCCTATAGATGGAAAAACAATATTA +
Preference number: 3 (lower is better)
Translates to: NGGAREITQGAK*NCNPIDGKTIL
Trigger: TAATATTGTTTTTCCATCTATAGGGTTGCAGTTCCATTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp CTGCAAATATACAGAGTATCATTATTACTGTCAGGAATTGCAGCTTGTCAATGGTTCCTATTCAACAAATaGCCCCTATACCAATGCATT +
Preference number: 3 (lower is better)
Translates to: LQIYRVSLLLSGIAACQWFLFNK*PLYQCI
Trigger: AATGCATTGGTATAGGGGCAATTTGTTGAATAGGAA...CCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTGTATATTTGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp CACCACTTATACAGTGGAAAGATTTGTCATTTTTCTTCAACTGTAGCAGACAATACCATGTATGTCCTTTaGGGACTGTGCTATATAGAT +
Preference number: 3 (lower is better)
Translates to: HHLYSGKICHFSSTVADNTMYVL*GLCYID
Trigger: ATCTATATAGCACAGTCCCAAAAGGACATACATGGT...ATTGTCTGCTACAGTTGAAGAAAAATGACAAATCTTTCCACTGTATAAGTGGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR-3UTR CAA 90 bp CACCACTTATACAGTGGAAAGATTTGTCATTTTTCTTCAACTGTAGCAGACAATGATGTATTTGAGTCCTaGTCATACAGATCTTTCACT +
Preference number: 3 (lower is better)
Translates to: HHLYSGKICHFSSTVADNDVFES*SYRSFT
Trigger: AGTGAAAGATCTGTATGACAAGGACTCAAATACATC...ATTGTCTGCTACAGTTGAAGAAAAATGACAAATCTTTCCACTGTATAAGTGGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 72 bp GGCATCATTATTTTATGGCTAATAACCACTTATAAGTaGATACATACCATGTATGTCCTTTTGGGACTGTGC +
Preference number: 3 (lower is better)
Translates to: GIIILWLITTYK*IHTMYVLLGLC
Trigger: GCACAGTCCCAAAAGGACATACATGGTATGTATTCACTTATAAGTGGTTATTAGCCATAAAATAATGATGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp ACCAGCAATGGAAGAGAGATTTATGCTCTACATCCTTaGCAGCATATATTATCACTTGAGGTTTTTAATCTT +
Preference number: 3 (lower is better)
Translates to: TSNGREIYALHP*QHILSLEVFNL
Trigger: AAGATTAAAAACCTCAAGTGATAATATATGCTGGCAAGGATGTAGAGCATAAATCTCTCTTCCATTGCTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 72 bp TTCATCAGGTCTCCCTCAGCATTAGAAACTAACTTCTaGAATTACCAGGTCATATTTTTCCAAACACTTTTA +
Preference number: 3 (lower is better)
Translates to: FIRSPSALETNF*NYQVIFFQTLL
Trigger: TAAAAGTGTTTGGAAAAATATGACCTGGTAATTCCAGAAGTTAGTTTCTAATGCTGAGGGAGACCTGATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CCA 72 bp TTTTTATCAGCTGCATCTGTTCTCTCGGAAAATATTTaGAATCGCTATTGTACACTATCATGTCATCTGCAA +
Preference number: 3 (lower is better)
Translates to: FLSAASVLSENI*NRYCTLSCHLQ
Trigger: TTGCAGATGACATGATAGTGTACAATAGCGATTCCAAATATTTTCCGAGAGAACAGATGCAGCTGATAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR TCA 72 bp GTTCAGCATGCTTTATTGGAAGATGATATGTTTCTCTaGATGCAACATCCTAAAATTCCACCCAATTTTGAT +
Preference number: 3 (lower is better)
Translates to: VQHALLEDDMFL*MQHPKIPPNFD
Trigger: ATCAAAATTGGGTGGAATTTTAGGATGTTGCATTCAGAGAAACATATCATCTTCCAATAAAGCATGCTGAAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp AATGTTTCTTGGCCTTATAGTGGTACAATATTGCAGTaGACAAACACTCTCTTTAGTTTAAAACTATGGATG +
Preference number: 3 (lower is better)
Translates to: NVSWPYSGTILQ*TNTLFSLKLWM
Trigger: CATCCATAGTTTTAAACTAAAGAGAGTGTTTGTGCACTGCAATATTGTACCACTATAAGGCCAAGAAACATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp AGCATGCTTTATTGGAAGATGATATGTTTCTCTGAATaGAACATCCTAAAATTCCACCCAATTTTGATTTCC +
Preference number: 3 (lower is better)
Translates to: SMLYWKMICFSE*NILKFHPILIS
Trigger: GGAAATCAAAATTGGGTGGAATTTTAGGATGTTGCATTCAGAGAAACATATCATCTTCCAATAAAGCATGCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR GCA 72 bp TATATTATCTGTAAATTATATGAACTGTATCATCTGTaGATTTGCAGGTCCTGGAGGAATAAGGTTGTAGAG +
Preference number: 3 (lower is better)
Translates to: YIICKLYELYHL*ICRSWRNKVVE
Trigger: CTCTACAACCTTATTCCTCCAGGACCTGCAAATGCACAGATGATACAGTTCATATAATTTACAGATAATATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
CDS-3UTR TCA 90 bp CTCACAAGGACGGGTACACCTGAGTGGCAGGCCAGCGCTGAAAGAGAGGGAAACAGCCTCCTTCCACTCTaGGGGACAGCTCCTCATGGA +
Preference number: 4 (lower is better)
Translates to: LTRTGTPEWQASAEREGNSLLPL*GTAPHG
Trigger: TCCATGAGGAGCTGTCCCTCAGAGTGGAAGGAGGCT...GTTTCCCTCTCTTTCAGCGCTGGCCTGCCACTCAGGTGTACCCGTCCTTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR TCA 90 bp CTCCCTCCTTCTTCCCCAGAAACACTCGCTGCTGCATGTCTCCTAAGGGCAGGCTACACTTTTGTCCAGTaGGCCTCCTTCCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: LPPSSPETLAAACLLRAGYTFVQ*ASFHSE
Trigger: CTCAGAGTGGAAGGAGGCTCACTGGACAAAAGTGTA...GCCTGCCCTTAGGAGACATGCAGCAGCGAGTGTTTCTGGGGAAGAAGGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR TCA 90 bp CTCCCTCCTTCTTCCCCAGAAACACTCGCTGCTGCATGTCTCCTAAGGGCAGGCTCGCCAACTTTCACTTaGGCTTTTGTACCACTCTGC +
Preference number: 4 (lower is better)
Translates to: LPPSSPETLAAACLLRAGSPTFT*AFVPLC
Trigger: GCAGAGTGGTACAAAAGCTCAAGTGAAAGTTGGCGA...GCCTGCCCTTAGGAGACATGCAGCAGCGAGTGTTTCTGGGGAAGAAGGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 72 bp CAGGAATTGCAGCTTGTCAATGGGATGGATCTCAAGTaGGGCCGGTTATTGGTTGGGCGTTCTCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: QELQLVNGMDLK*GRLLVGRSLSL
Trigger: GAGACTGAGAGAACGCCCAACCAATAACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 72 bp AATCGGGGGTTGAAAGGCTTTGTGGATGGGTTGGTGTaGCTATCACTACACCAGGGTTCCAAAATGGCCACA +
Preference number: 4 (lower is better)
Translates to: NRGLKGFVDGLV*LSLHQGSKMAT
Trigger: TGTGGCCATTTTGGAACCCTGGTGTAGTGATAGCAACACCAACCCATCCACAAAGCCTTTCAACCCCCGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 72 bp ACCTCTAATGTGGGAGATCCAATGGAGACTTCAAACTaGGGCTCCTCCTCCCATTATCCCTCCCTTATCCTC +
Preference number: 4 (lower is better)
Translates to: TSNVGDPMETSN*GSSSHYPSLIL
Trigger: GAGGATAAGGGAGGGATAATGGGAGGAGGAGCCCAAGTTTGAAGTCTCCATTGGATCTCCCACATTAGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR TCA 90 bp ATTACTGTCAGGAATTGCAGCTTGTCAATGGGATGGATCTCAAGTTGGGCCGGTTACACTTTTGTCCAGTaGGCCTCCTTCCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: ITVRNCSLSMGWISSWAGYTFVQ*ASFHSE
Trigger: CTCAGAGTGGAAGGAGGCTCACTGGACAAAAGTGTA...ACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR TCA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACAGCACAGATGCACACTTaGATGATGGAACCACAGCAG +
Preference number: 4 (lower is better)
Translates to: GLVGHHWKERLTGHANITAQMHT*MMEPQQ
Trigger: CTGCTGTGGTTCCATCATTCAAGTGTGCATCTGTGC...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172199.3
3UTR CAA 72 bp AGGGTAAATCGGGGGTTGAAAGGCTTTGTGGATGGGTaGGTGTTGCTATCACTACACCAGGGTTCCAAAATG +
Preference number: 4 (lower is better)
Translates to: RVNRGLKGFVDG*VLLSLHQGSKM
Trigger: CATTTTGGAACCCTGGTGTAGTGATAGCAACACCAACCCATCCACAAAGCCTTTCAACCCCCGATTTACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 72 bp TACATATGTGTTGGGGGACCTAGGACAAGCCCTTATTaGTTCTCTGGCTGTGGTTCAGCTTTTGAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: YICVGGPRTSPY*FSGCGSAFESS
Trigger: GGAGCTCTCAAAAGCTGAACCACAGCCAGAGAACAAATAAGGGCTTGTCCTAGGTCCCCCAACACATATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 72 bp CGTGTCACCATCCACATTTGCAATGTGCTTCCTGGTTaGATGGCTGTGAAGGCCACAACCACAATGAAAGTC +
Preference number: 4 (lower is better)
Translates to: RVTIHICNVLPG*MAVKATTTMKV
Trigger: GACTTTCATTGTGGTTGTGGCCTTCACAGCCATCAAACCAGGAAGCACATTGCAAATGTGGATGGTGACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
CDS-3UTR TCA 90 bp GAAATGCACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATTCACTCTCATGGCCGAGTGGACAGCTTTaGCTGCAAACAGACAAAGGA +
Preference number: 4 (lower is better)
Translates to: EMHSMPPPLLADFHSLSWPSGQL*LQTDKG
Trigger: TCCTTTGTCTGTTTGCAGTCAAAGCTGTCCACTCGG...CCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR TCA 90 bp GAGCAGGATAGACTCTCATGCAGAAGAAGGAGCAAGGGAAGTACTGCATCTGATCAAAAGGAGCATAGCTaGTCTGTGGGACATTGTAGA +
Preference number: 4 (lower is better)
Translates to: EQDRLSCRRRSKGSTASDQKEHS*SVGHCR
Trigger: TCTACAATGTCCCACAGATCAGCTATGCTCCTTTTG...ATCAGATGCAGTACTTCCCTTGCTCCTTCTTCTGCATGAGAGTCTATCCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
CDS-3UTR TCA 90 bp GAGCTCATGTCTCTAGTTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATCCGAGTGGACAGCTTTaGCTGCAAACAGACAAAGGA +
Preference number: 4 (lower is better)
Translates to: ELMSLVAYVSEDGLVGHHPSGQL*LQTDKG
Trigger: TCCTTTGTCTGTTTGCAGTCAAAGCTGTCCACTCGG...ATGATGGCCAACTAGGCCATCTTCTGATACATATGCAACTAGAGACATGAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR TCA 90 bp GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAATGGAACTGCAACCCTATAGATGTTCCTGGAGTACAATaGGCACAATCCAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: GGAREITQGAKWNCNPIDVPGVQ*AQSRER
Trigger: TCTCTCTCTGGATTGTGCTCATTGTACTCCAGGAAC...ATCTATAGGGTTGCAGTTCCATTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTTTTGCCTGCCCCTATGTCTAGTTTCCAAAGAGGAAGATCTTCAGGACACTTaGTGCACTGATCCATATCTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCLPLCLVSKEEDLQDT*CTDPYL
Trigger: CAGATATGGATCAGTGCATCAAGTGTCCTGAAGATC...TTCCTCTTTGGAAACTAGACATAGGGGCAGGCAAAACACACACACACACACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172199.3
CDS-3UTR CCA 90 bp GAAATGCACTCTATGCCTCCTCCATTGCTTGCAGATTTCCATTCACTCTCATGGCCATGGTTTTACCTTTaGAGCTCAGGTAAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: EMHSMPPPLLADFHSLSWPWFYL*SSGKWV
Trigger: TACCCACTTACCTGAGCTCCAAAGGTAAAACCATGG...CCATGAGAGTGAATGGAAATCTGCAAGCAATGGAGGAGGCATAGAGTGCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172199.3
CDS-3UTR TCA 90 bp CCAGCCTCTTTGCTGGAGCTTTTTATCAGCTGCATCTGTTCTCTCGGAAAATATCAAAAGGAGCATAGCTaGTCTGTGGGACATTGTAGA +
Preference number: 4 (lower is better)
Translates to: PASLLELFISCICSLGKYQKEHS*SVGHCR
Trigger: TCTACAATGTCCCACAGATCAGCTATGCTCCTTTTG...ATATTTTCCGAGAGAACAGATGCAGCTGATAAAAAGCTCCAGCAAAGAGGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR TCA 90 bp CCTCAAACAAGACAAGAGCTTATCTTTCTCATCTATGGATATCAGGAAAATTTCAGCCTCCTTCCACTCTaGGGGACAGCTCCTCATGGA +
Preference number: 4 (lower is better)
Translates to: PQTRQELIFLIYGYQENFSLLPL*GTAPHG
Trigger: TCCATGAGGAGCTGTCCCTCAGAGTGGAAGGAGGCT...GAAATTTTCCTGATATCCATAGATGAGAAAGATAAGCTCTTGTCTTGTTTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR TCA 90 bp TGCTGGAGCTTTTTATCAGCTGCATCTGTTCTCTCGGAAAATATTTGGAATCGCTCGCCAACTTTCACTTaGGCTTTTGTACCACTCTGC +
Preference number: 4 (lower is better)
Translates to: CWSFLSAASVLSENIWNRSPTFT*AFVPLC
Trigger: GCAGAGTGGTACAAAAGCTCAAGTGAAAGTTGGCGA...GCGATTCCAAATATTTTCCGAGAGAACAGATGCAGCTGATAAAAAGCTCCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR TCA 90 bp CAAATCTGGCCTGGAGAACTAGAAGACTGGTGGGAGGGTAAGTTGAGATGTGTTTGCTTATTTGGATACTaGTCTTCAGGACACTTGATG +
Preference number: 4 (lower is better)
Translates to: QIWPGELEDWWEGKLRCVCLFGY*SSGHLM
Trigger: CATCAAGTGTCCTGAAGATCAGTATCCAAATAAGCA...AACACATCTCAACTTACCCTCCCACCAGTCTTCTAGTTCTCCAGGCCAGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172199.3
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTTTTGCCTGCCCCTATGTCTAGTTTCCAAAGAGGAATTTTGTAAGAATGGATaGAGCTTCCAAGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVFCLPLCLVSKEEFCKNG*SFQGRG
Trigger: TCCTCTCCCTTGGAAGCTCCATCCATTCTTACAAAA...TTCCTCTTTGGAAACTAGACATAGGGGCAGGCAAAACACACACACACACACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 72 bp AATCCCACTGGGACTCTGCCTAAGCTCTTATCCATGTaGTTCTACCTGAATAGTGAAAAGAGCACAAAACCC +
Preference number: 4 (lower is better)
Translates to: NPTGTLPKLLSM*FYLNSEKSTKP
Trigger: GGGTTTTGTGCTCTTTTCACTATTCAGGTAGAACAACATGGATAAGAGCTTAGGCAGAGTCCCAGTGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 72 bp TGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATaGGAAAGAGAGGCTCACTGGTCATGCAAACATTAC +
Preference number: 4 (lower is better)
Translates to: CICIRRWPSWPS*EREAHWSCKHY
Trigger: GTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCCATCTTCTGATACATATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 72 bp AGACACAGCAACAGAAAATACAACCCCAAAGATCATTaGTCTCAAGACACAAGTGACTGTGCTAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: RHSNRKYNPKDH*SQDTSDCARLA
Trigger: GGCCAACCTAGCACAGTCACTTGTGTCTTGAGACAAATGATCTTTGGGGTTGTATTTTCTGTTGCTGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
CDS-3UTR TCA 90 bp TGCTGGAGCTTTTTATCAGCTGCATCTGTTCTCTCGGAAAATATTTGGAATCGCTTGTTTTTGCCTCATTaGAGCTCTCTGGTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: CWSFLSAASVLSENIWNRLFLPH*SSLVAF
Trigger: GAAGGCTACCAGAGAGCTTCAATGAGGCAAAAACAA...GCGATTCCAAATATTTTCCGAGAGAACAGATGCAGCTGATAAAAAGCTCCAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000172199.3
CDS-3UTR CCA 90 bp GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAATGGAACTGCAACCCTATAGATTTTTGTAAGAATGGATaGAGCTTCCAAGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GGAREITQGAKWNCNPIDFCKNG*SFQGRG
Trigger: TCCTCTCCCTTGGAAGCTCCATCCATTCTTACAAAA...ATCTATAGGGTTGCAGTTCCATTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 72 bp ACAAAACACCCATGGAAAGAGTTACAGAGACAAAGTTaGGAGCTGAGACAAAAGGATGCACCATCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: TKHPWKELQRQS*ELRQKDAPSRD
Trigger: GTCTCTAGATGGTGCATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCTTTCCATGGGTGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 72 bp AAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATaGGGAACAAAACACCCATGGAAAGAGTTACAGAGA +
Preference number: 4 (lower is better)
Translates to: KTKVWTLCPFLE*GTKHPWKELQR
Trigger: TCTCTGTAACTCTTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 72 bp ATTATATTCCTGATTCCAAGTGAACCTCAAACATCCTaGCTTGGCCCTCCATCATGTCCAGATTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: IIFLIPSEPQTS*LGPPSCPDSLA
Trigger: AGCCAAAGAATCTGGACATGATGGAGGGCCAAGCAAGGATGTTTGAGGTTCACTTGGAATCAGGAATATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 72 bp GCTAAGATGAACAAGGAAGAGAGAAAACTTGTTGCTTaGGCCTCTCTGTGTCTTGGTGTCCTTGCTCAATAT +
Preference number: 4 (lower is better)
Translates to: AKMNKEERKLVA*ASLCLGVLAQY
Trigger: ATATTGAGCAAGGACACCAAGACACAGAGAGGCCAAAGCAACAAGTTTTCTCTCTTCCTTGTTCATCTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR TCA 90 bp AATTTGCGAAACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGGTTCCTGGAGTACAATaGGCACAATCCAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: NLRNMKLKKNEDQSVDTLVPGVQ*AQSRER
Trigger: TCTCTCTCTGGATTGTGCTCATTGTACTCCAGGAAC...CAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTTTCGCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR CCA 90 bp AAAAAGCTACAGAGGCAAAGTTTGAAGCTGAGACAGAAGGAAAGACCATCCACTAACCACAGCAGACTATaGCATTTGAAAGTCGTGTCA +
Preference number: 4 (lower is better)
Translates to: KKLQRQSLKLRQKERPSTNHSRL*HLKVVS
Trigger: TGACACGACTTTCAAATGCCATAGTCTGCTGTGGTT...AGTGGATGGTCTTTCCTTCTGTCTCAGCTTCAAACTTTGCCTCTGTAGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172199.3
3UTR CAA 72 bp ATACAGAGTATCATTATTACTGTCAGGAATTGCAGCTaGTCAATGGGATGGATCTCAAGTTGGGCCGGTTAT +
Preference number: 4 (lower is better)
Translates to: IQSIIITVRNCS*SMGWISSWAGY
Trigger: ATAACCGGCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR TCA 90 bp TGCTGGAGCTTTTTATCAGCTGCATCTGTTCTCTCGGAAAATATTTGGAATCGCGGACACTTGATGCACTaGTCCATATCTGTTTCATTT +
Preference number: 4 (lower is better)
Translates to: CWSFLSAASVLSENIWNRGHLMH*SISVSF
Trigger: AAATGAAACAGATATGGATCAGTGCATCAAGTGTCC...GCGATTCCAAATATTTTCCGAGAGAACAGATGCAGCTGATAAAAAGCTCCAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172199.3
CDS-3UTR TCA 90 bp CTGCAAATATACAGAGTATCATTATTACTGTCAGGAATTGCAGCTTGTCAATGGCATTACACCAGAGGATaGTTTGCCCAAACTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LQIYRVSLLLSGIAACQWHYTRG*FAQTLS
Trigger: ACTCAGAGTTTGGGCAAATCATCCTCTGGTGTAATG...CCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTGTATATTTGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172199.3
3UTR CAA 72 bp TTTAACAGTTCCCCATGTTCTGTTGAATCCTTGGCCTaGAACCTCATATCTTGGTCCACATTTACCTTCAAA +
Preference number: 4 (lower is better)
Translates to: FNSSPCSVESLA*NLISWSTFTFK
Trigger: TTTGAAGGTAAATGTGGACCAAGATATGAGGTTCAAGGCCAAGGATTCAACAGAACATGGGGAACTGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 72 bp TGCAAATATACAGAGTATCATTATTACTGTCAGGAATaGCAGCTTGTCAATGGGATGGATCTCAAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: CKYTEYHYYCQE*QLVNGMDLKLG
Trigger: GCCCAACTTGAGATCCATCCCATTGACAAGCTGCAATTCCTGACAGTAATAATGATACTCTGTATATTTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR CCA 90 bp AAAAAGCTACAGAGGCAAAGTTTGAAGCTGAGACAGAAGGAAAGACCATCCACTACAATCCTAAAATCATaGCTGAAAAGGCAGATAAAC +
Preference number: 4 (lower is better)
Translates to: KKLQRQSLKLRQKERPSTTILKS*LKRQIN
Trigger: GTTTATCTGCCTTTTCAGCCATGATTTTAGGATTGT...AGTGGATGGTCTTTCCTTCTGTCTCAGCTTCAAACTTTGCCTCTGTAGCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000172199.3
3UTR CAA 72 bp GCATCTTTCAGTTATAAATGCCTGTACTTGCTAGTTTaGTGTCAACTTGACATAGCAGGAGTTTCACAGAGA +
Preference number: 4 (lower is better)
Translates to: ASFSYKCLYLLV*CQLDIAGVSQR
Trigger: TCTCTGTGAAACTCCTGCTATGTCAAGTTGACACAAAACTAGCAAGTACAGGCATTTATAACTGAAAGATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
CDS-3UTR TCA 90 bp CACCACTTATACAGTGGAAAGATTTGTCATTTTTCTTCAACTGTAGCAGACAATCTAGGAGGACATAGCTaGGATTTCTGTTATTTGCTC +
Preference number: 4 (lower is better)
Translates to: HHLYSGKICHFSSTVADNLGGHS*DFCYLL
Trigger: GAGCAAATAACAGAAATCTCAGCTATGTCCTCCTAG...ATTGTCTGCTACAGTTGAAGAAAAATGACAAATCTTTCCACTGTATAAGTGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172199.3
CDS-3UTR GCA 90 bp TCTTTGATGTATTTGAGTCCTTGTCATACAGATCTTTCACTTGCTTGCTTATTGGAATCCTGTTTCATTTaGAATCTCTCCCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: SLMYLSPCHTDLSLACLLESCFI*NLSLWT
Trigger: TGTCCAGAGGGAGAGATTGCAAATGAAACAGGATTC...CAATAAGCAAGCAAGTGAAAGATCTGTATGACAAGGACTCAAATACATCAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
3UTR CAA 72 bp CTTTTTATCAGCTGCATCTGTTCTCTCGGAAAATATTaGGAATCGCTATTGTACACTATCATGTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: LFISCICSLGKY*ESLLYTIMSSA
Trigger: TGCAGATGACATGATAGTGTACAATAGCGATTCCAAATATTTTCCGAGAGAACAGATGCAGCTGATAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 72 bp ACTAATTTCTTAAAGTTAACTTTCTTTCCAGCCTCTTaGCTGGAGCTTTTTATCAGCTGCATCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: TNFLKLTFFPAS*LELFISCICSL
Trigger: GAGAGAACAGATGCAGCTGATAAAAAGCTCCAGCAAAGAGGCTGGAAAGAAAGTTAACTTTAAGAAATTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR TCA 90 bp CCTCAAACAAGACAAGAGCTTATCTTTCTCATCTATGGATATCAGGAAAATTTCAGTTGCCTGGCTTCATaGTCAATTAAATATGGACAT +
Preference number: 4 (lower is better)
Translates to: PQTRQELIFLIYGYQENFSCLAS*SIKYGH
Trigger: ATGTCCATATTTAATTGATCATGAAGCCAGGCAACT...GAAATTTTCCTGATATCCATAGATGAGAAAGATAAGCTCTTGTCTTGTTTGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 72 bp TTTATGCTCTACATCCTTGCCAGCATATATTATCACTaGAGGTTTTTAATCTTTGCCAGTCTGATCAGTGTA +
Preference number: 4 (lower is better)
Translates to: FMLYILASIYYH*RFLIFASLISV
Trigger: TACACTGATCAGACTGGCAAAGATTAAAAACCTCAAGTGATAATATATGCTGGCAAGGATGTAGAGCATAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 72 bp TGCATCTGTTCTCTCGGAAAATATTTGGAATCGCTATaGTACACTATCATGTCATCTGCAATTAACTTCTTA +
Preference number: 4 (lower is better)
Translates to: CICSLGKYLESL*YTIMSSAINFL
Trigger: TAAGAAGTTAATTGCAGATGACATGATAGTGTACAATAGCGATTCCAAATATTTTCCGAGAGAACAGATGCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
3UTR CAA 72 bp AGTCCTTGTCATACAGATCTTTCACTTGCTTGCTTATaGTTACACCAAGATACTTTATGTTATTTGTCGCTA +
Preference number: 4 (lower is better)
Translates to: SPCHTDLSLACL*LHQDTLCYLSL
Trigger: TAGCGACAAATAACATAAAGTATCTTGGTGTAACAATAAGCAAGCAAGTGAAAGATCTGTATGACAAGGACT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS TCA 90 bp GAGGAGCCCGGAGTACACTTTTGTCCAGTGAGCCTCCTTCCACTCTaGGGGACAGCTCCTCATGGAGTGCCTGGGCAATGGCATACACAG +
Preference number: 5 (lower is better)
Translates to: EEPGVHFCPVSLLPL*GTAPHGVPGQWHTQ
Trigger: CTGTGTATGCCATTGCCCAGGCACTCCATGAGGAGCTGTCCCTCAGAGTGGAAGGAGGCTCACTGGACAAAAGTGTACTCCGGGCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS CCA 90 bp AGTGAGCCTCCTTCCACTCTGAGGGACAGCTCCTCATGGAGTGCCTaGGCAATGGCATACACAGCAGCATGGACTTTGGAGCTACAGGGT +
Preference number: 5 (lower is better)
Translates to: SEPPSTLRDSSSWSA*AMAYTAAWTLELQG
Trigger: ACCCTGTAGCTCCAAAGTCCATGCTGCTGTGTATGCCATTGCCCAGGCACTCCATGAGGAGCTGTCCCTCAGAGTGGAAGGAGGCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS CCA 90 bp CTTTTGTCCAGTGAGCCTCCTTCCACTCTGAGGGACAGCTCCTCATaGAGTGCCTGGGCAATGGCATACACAGCAGCATGGACTTTGGAG +
Preference number: 5 (lower is better)
Translates to: LLSSEPPSTLRDSSS*SAWAMAYTAAWTLE
Trigger: CTCCAAAGTCCATGCTGCTGTGTATGCCATTGCCCAGGCACTCCATGAGGAGCTGTCCCTCAGAGTGGAAGGAGGCTCACTGGACAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS TCA 90 bp CTGGGCAATGGCATACACAGCAGCATGGACTTTGGAGCTACAGGGTaGGGTATTCATATCCCAAACATGCAGAGGTCGTGTGCTCAGGCT +
Preference number: 5 (lower is better)
Translates to: LGNGIHSSMDFGATG*GIHIPNMQRSCAQA
Trigger: AGCCTGAGCACACGACCTCTGCATGTTTGGGATATGAATACCTCACCCTGTAGCTCCAAAGTCCATGCTGCTGTGTATGCCATTGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS CCA 90 bp GACAGCTCCTCATGGAGTGCCTGGGCAATGGCATACACAGCAGCATaGACTTTGGAGCTACAGGGTGAGGTATTCATATCCCAAACATGC +
Preference number: 5 (lower is better)
Translates to: DSSSWSAWAMAYTAA*TLELQGEVFISQTC
Trigger: GCATGTTTGGGATATGAATACCTCACCCTGTAGCTCCAAAGTCCATGCTGCTGTGTATGCCATTGCCCAGGCACTCCATGAGGAGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS GCA 90 bp AGCTACAGGGTGAGGTATTCATATCCCAAACATGCAGAGGTCGTGTaGTCAGGCTGCCATTTGGCTCACATTGACTTAGTTGCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: SYRVRYSYPKHAEVV*SGCHLAHIDLVAWL
Trigger: AAGCCAGGCAACTAAGTCAATGTGAGCCAAATGGCAGCCTGAGCACACGACCTCTGCATGTTTGGGATATGAATACCTCACCCTGTAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS TCA 90 bp GGAGCTGGACAATGGTCCCAAGACTCTGATCAAAAGGAGCATAGCTaGTCTGTGGGACATTGTAGAGACTTAGAACTCGGGAGATCTGAG +
Preference number: 5 (lower is better)
Translates to: GAGQWSQDSDQKEHS*SVGHCRDLELGRSE
Trigger: CTCAGATCTCCCGAGTTCTAAGTCTCTACAATGTCCCACAGATCAGCTATGCTCCTTTTGATCAGAGTCTTGGGACCATTGTCCAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTTTTGCCTGCCCCTATGTCTAGTTTCCAAAGAGGAAGACAAAGGAATCTCCTaGCCATATTTGCCCCAAGTT +
Preference number: 5 (lower is better)
Translates to: CVCVCVFCLPLCLVSKEEDKGIS*PYLPQV
Trigger: AACTTGGGGCAAATATGGCAAGGAGATTCCTTTGTC...TTCCTCTTTGGAAACTAGACATAGGGGCAGGCAAAACACACACACACACACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS TCA 90 bp GATTTCCCTTCAACAGGTGTTTTCCTAAATCCGAGTGGACAGCTTTaGCTGCAAACAGACAAAGGAATCTCCTTGCCATATTTGCCCCAA +
Preference number: 5 (lower is better)
Translates to: DFPSTGVFLNPSGQL*LQTDKGISLPYLPQ
Trigger: TTGGGGCAAATATGGCAAGGAGATTCCTTTGTCTGTTTGCAGTCAAAGCTGTCCACTCGGATTTAGGAAAACACCTGTTGAAGGGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR CAA 90 bp GGCCTAGTTGGCCATCATTGGAAAGAGAGGCTCACTGGTCATGCAAACATTACAATCTCCTTGCCATATTaGCCCCAAGTTATGAGTTTT +
Preference number: 5 (lower is better)
Translates to: GLVGHHWKERLTGHANITISLPY*PQVMSF
Trigger: AAAACTCATAACTTGGGGCAAATATGGCAAGGAGAT...TGTAATGTTTGCATGACCAGTGAGCCTCTCTTTCCAATGATGGCCAACTAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR CAA 90 bp GGAGGAGCTAGAGAAATTACCCAAGGAGCTAAATGGAACTGCAACCCTATAGATAGAATCCTGTTTCATTaGCAATCTCTCCCTCTGGAC +
Preference number: 5 (lower is better)
Translates to: GGAREITQGAKWNCNPIDRILFH*QSLPLD
Trigger: GTCCAGAGGGAGAGATTGCAAATGAAACAGGATTCT...ATCTATAGGGTTGCAGTTCCATTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232807.2
CDS GCA 90 bp CTGATCTTCAGGACACTTGATGCACTGATCCATATCTGTTTCATTTaGAATCTCTCCCTCTGGACATGGGAGACAATCAAAGCAACAGAA +
Preference number: 5 (lower is better)
Translates to: LIFRTLDALIHICFI*NLSLWTWETIKATE
Trigger: TTCTGTTGCTTTGATTGTCTCCCATGTCCAGAGGGAGAGATTGCAAATGAAACAGATATGGATCAGTGCATCAAGTGTCCTGAAGATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172199.3
CDS CCA 90 bp GTCGTGTGCTCAGGCTGCCATTTGGCTCACATTGACTTAGTTGCCTaGCTTCATGATCAATTAAATATGGACATTCAAATAAGACCATCC +
Preference number: 5 (lower is better)
Translates to: VVCSGCHLAHIDLVA*LHDQLNMDIQIRPS
Trigger: GGATGGTCTTATTTGAATGTCCATATTTAATTGATCATGAAGCCAGGCAACTAAGTCAATGTGAGCCAAATGGCAGCCTGAGCACACGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS CCA 90 bp CAAACTCGGTTGCCAAAATCTCCTTGTTCACAATGTTCTCCTTATTaGAACTTCTCCCAAGCTGTCCCTTTTGTAAGAATGGATGGAGCT +
Preference number: 5 (lower is better)
Translates to: QTRLPKSPCSQCSPY*NFSQAVPFVRMDGA
Trigger: AGCTCCATCCATTCTTACAAAAGGGACAGCTTGGGAGAAGTTCCAATAAGGAGAACATTGTGAACAAGGAGATTTTGGCAACCGAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR CAA 90 bp GGGCAGGCCTCTCAGGAATATCAACTCAATATAACACACCAAGATGCAATAAACATCTCCTTGCCATATTaGCCCCAAGTTATGAGTTTT +
Preference number: 5 (lower is better)
Translates to: GQASQEYQLNITHQDAINISLPY*PQVMSF
Trigger: AAAACTCATAACTTGGGGCAAATATGGCAAGGAGAT...GTTTATTGCATCTTGGTGTGTTATATTGAGTTGATATTCCTGAGAGGCCTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR CAA 90 bp AATTTGCGAAACATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGGACAAAGGAATCTCCTaGCCATATTTGCCCCAAGTT +
Preference number: 5 (lower is better)
Translates to: NLRNMKLKKNEDQSVDTLDKGIS*PYLPQV
Trigger: AACTTGGGGCAAATATGGCAAGGAGATTCCTTTGTC...CAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCATGTTTCGCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS-3UTR CAA 90 bp GCTAGAACTATTTCCAATTTCATGAGAAACTGCCAAACTGATTTCCAAAGTGGCCCATATCTGTTTCATTaGCAATCTCTCCCTCTGGAC +
Preference number: 5 (lower is better)
Translates to: ARTISNFMRNCQTDFQSGPYLFH*QSLPLD
Trigger: GTCCAGAGGGAGAGATTGCAAATGAAACAGATATGG...GCCACTTTGGAAATCAGTTTGGCAGTTTCTCATGAAATTGGAAATAGTTCTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172199.3
CDS GCA 90 bp TGTACCACTCTGCAGAGACTGGTAATTAAAGATGTCAAACTCGGTTaGCAAAATCTCCTTGTTCACAATGTTCTCCTTATTGGAACTTCT +
Preference number: 5 (lower is better)
Translates to: CTTLQRLVIKDVKLG*QNLLVHNVLLIGTS
Trigger: AGAAGTTCCAATAAGGAGAACATTGTGAACAAGGAGATTTTGGCAACCGAGTTTGACATCTTTAATTACCAGTCTCTGCAGAGTGGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS GCA 90 bp AGTGGTGTGAACAGCAAGTGCCAGAAGAGAATATGTGTCACCAAATaGAATGATAACACGTGTCAATGTGAATTTTTCATTAAAAAGCTT +
Preference number: 5 (lower is better)
Translates to: SGVNSKCQKRICVTK*NDNTCQCEFFIKKL
Trigger: AAGCTTTTTAATGAAAAATTCACATTGACACGTGTTATCATTGCATTTGGTGACACATATTCTCTTCTGGCACTTGCTGTTCACACCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS TCA 72 bp CCAAGGGAGAGGAGCCCGGAGTACACTTTTGTCCAGTaGGCCTCCTTCCACTCTGAGGGACAGCTCCTCATG +
Preference number: 6 (lower is better)
Translates to: PRERSPEYTFVQ*ASFHSEGQLLM
Trigger: CATGAGGAGCTGTCCCTCAGAGTGGAAGGAGGCTCACTGGACAAAAGTGTACTCCGGGCTCCTCTCCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS CAA 72 bp TGGAGCTTCCAAGGGAGAGGAGCCCGGAGTACACTTTaGTCCAGTGAGCCTCCTTCCACTCTGAGGGACAGC +
Preference number: 6 (lower is better)
Translates to: WSFQGRGARSTL*SSEPPSTLRDS
Trigger: GCTGTCCCTCAGAGTGGAAGGAGGCTCACTGGACAAAAGTGTACTCCGGGCTCCTCTCCCTTGGAAGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS TCA 72 bp GGAGTACACTTTTGTCCAGTGAGCCTCCTTCCACTCTaGGGGACAGCTCCTCATGGAGTGCCTGGGCAATGG +
Preference number: 6 (lower is better)
Translates to: GVHFCPVSLLPL*GTAPHGVPGQW
Trigger: CCATTGCCCAGGCACTCCATGAGGAGCTGTCCCTCAGAGTGGAAGGAGGCTCACTGGACAAAAGTGTACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS GCA 72 bp GCCTCCTTCCACTCTGAGGGACAGCTCCTCATGGAGTaGCTGGGCAATGGCATACACAGCAGCATGGACTTT +
Preference number: 6 (lower is better)
Translates to: ASFHSEGQLLME*LGNGIHSSMDF
Trigger: AAAGTCCATGCTGCTGTGTATGCCATTGCCCAGGCACTCCATGAGGAGCTGTCCCTCAGAGTGGAAGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS CCA 72 bp CCTTCCACTCTGAGGGACAGCTCCTCATGGAGTGCCTaGGCAATGGCATACACAGCAGCATGGACTTTGGAG +
Preference number: 6 (lower is better)
Translates to: PSTLRDSSSWSA*AMAYTAAWTLE
Trigger: CTCCAAAGTCCATGCTGCTGTGTATGCCATTGCCCAGGCACTCCATGAGGAGCTGTCCCTCAGAGTGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS CCA 72 bp GATGTCCCTAAGGAAGAGTTCTCCCCGAATATCATCTaGGACTACCAGGCCAACCCAGACCCAAGTGAAGTA +
Preference number: 6 (lower is better)
Translates to: DVPKEEFSPNII*DYQANPDPSEV
Trigger: TACTTCACTTGGGTCTGGGTTGGCCTGGTAGTCCCAGATGATATTCGGGGAGAACTCTTCCTTAGGGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS CCA 72 bp GAACTTCTCCCAAGCTGTCCCTTTTGTAAGAATGGATaGAGCTTCCAAGGGAGAGGAGCCCGGAGTACACTT +
Preference number: 6 (lower is better)
Translates to: ELLPSCPFCKNG*SFQGRGARSTL
Trigger: AAGTGTACTCCGGGCTCCTCTCCCTTGGAAGCTCCATCCATTCTTACAAAAGGGACAGCTTGGGAGAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS CAA 72 bp CCCAAACATGCAGAGGTCGTGTGCTCAGGCTGCCATTaGGCTCACATTGACTTAGTTGCCTGGCTTCATGAT +
Preference number: 6 (lower is better)
Translates to: PKHAEVVCSGCH*AHIDLVAWLHD
Trigger: ATCATGAAGCCAGGCAACTAAGTCAATGTGAGCCAAATGGCAGCCTGAGCACACGACCTCTGCATGTTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS CCA 72 bp GTGCCTGGGCAATGGCATACACAGCAGCATGGACTTTaGAGCTACAGGGTGAGGTATTCATATCCCAAACAT +
Preference number: 6 (lower is better)
Translates to: VPGQWHTQQHGL*SYRVRYSYPKH
Trigger: ATGTTTGGGATATGAATACCTCACCCTGTAGCTCCAAAGTCCATGCTGCTGTGTATGCCATTGCCCAGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS CAA 72 bp AGTGCCTGGGCAATGGCATACACAGCAGCATGGACTTaGGAGCTACAGGGTGAGGTATTCATATCCCAAACA +
Preference number: 6 (lower is better)
Translates to: SAWAMAYTAAWT*ELQGEVFISQT
Trigger: TGTTTGGGATATGAATACCTCACCCTGTAGCTCCAAAGTCCATGCTGCTGTGTATGCCATTGCCCAGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS TCA 72 bp CAATGGTCCCAAGACTCTGATCAAAAGGAGCATAGCTaGTCTGTGGGACATTGTAGAGACTTAGAACTCGGG +
Preference number: 6 (lower is better)
Translates to: QWSQDSDQKEHS*SVGHCRDLELG
Trigger: CCCGAGTTCTAAGTCTCTACAATGTCCCACAGATCAGCTATGCTCCTTTTGATCAGAGTCTTGGGACCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS GCA 72 bp GTGAGGTATTCATATCCCAAACATGCAGAGGTCGTGTaGTCAGGCTGCCATTTGGCTCACATTGACTTAGTT +
Preference number: 6 (lower is better)
Translates to: VRYSYPKHAEVV*SGCHLAHIDLV
Trigger: AACTAAGTCAATGTGAGCCAAATGGCAGCCTGAGCACACGACCTCTGCATGTTTGGGATATGAATACCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS TCA 72 bp TCCCTCTGGACATGGGAGACAATCAAAGCAACAGAATaGTTTCCCTTCAACAGGTGTTTTCCTAAATCCGAG +
Preference number: 6 (lower is better)
Translates to: SLWTWETIKATE*FPFNRCFPKSE
Trigger: CTCGGATTTAGGAAAACACCTGTTGAAGGGAAATCATTCTGTTGCTTTGATTGTCTCCCATGTCCAGAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS GCA 72 bp GAACTCGGGAGATCTGAGTTGATATTCCTGTTGAAATaGCTCCTATCACTGCAACCAGCTTATCAGTCTTCT +
Preference number: 6 (lower is better)
Translates to: ELGRSELIFLLK*LLSLQPAYQSS
Trigger: AGAAGACTGATAAGCTGGTTGCAGTGATAGGAGGCATTTCAACAGGAATATCAACTCAGATCTCCCGAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS CAA 90 bp TCAAACTCGGTTGCCAAAATCTCCTTGTTCACAATGTTCTCCTTATaGGAACTTCTCCCAAGCTGTCCCTTTTGTAAGAATGGATGGAGC +
Preference number: 6 (lower is better)
Translates to: SNSVAKISLFTMFSL*ELLPSCPFCKNGWS
Trigger: GCTCCATCCATTCTTACAAAAGGGACAGCTTGGGAGAAGTTCCAATAAGGAGAACATTGTGAACAAGGAGATTTTGGCAACCGAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS TCA 72 bp TCAACAGGTGTTTTCCTAAATCCGAGTGGACAGCTTTaGCTGCAAACAGACAAAGGAATCTCCTTGCCATAT +
Preference number: 6 (lower is better)
Translates to: STGVFLNPSGQL*LQTDKGISLPY
Trigger: ATATGGCAAGGAGATTCCTTTGTCTGTTTGCAGTCAAAGCTGTCCACTCGGATTTAGGAAAACACCTGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS GCA 72 bp AGGACACTTGATGCACTGATCCATATCTGTTTCATTTaGAATCTCTCCCTCTGGACATGGGAGACAATCAAA +
Preference number: 6 (lower is better)
Translates to: RTLDALIHICFI*NLSLWTWETIK
Trigger: TTTGATTGTCTCCCATGTCCAGAGGGAGAGATTGCAAATGAAACAGATATGGATCAGTGCATCAAGTGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172199.3
CDS CAA 72 bp GGACATTGTAGAGACTTAGAACTCGGGAGATCTGAGTaGATATTCCTGTTGAAATGCCTCCTATCACTGCAA +
Preference number: 6 (lower is better)
Translates to: GHCRDLELGRSE*IFLLKCLLSLQ
Trigger: TTGCAGTGATAGGAGGCATTTCAACAGGAATATCAACTCAGATCTCCCGAGTTCTAAGTCTCTACAATGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS CAA 72 bp GAACTTTTCATGGCCTTCATCTCAGTAAAGTCAACGTaGAAGACATGGAATCCCAGGGACATATTGAACAGA +
Preference number: 6 (lower is better)
Translates to: ELFMAFISVKST*KTWNPRDILNR
Trigger: TCTGTTCAATATGTCCCTGGGATTCCATGTCTTCAACGTTGACTTTACTGAGATGAAGGCCATGAAAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS CAA 90 bp ATGTTGAACACTGTGAGATTCAAAGACAAACTCGCCAACTTTCACTaGAGCTTTTGTACCACTCTGCAGAGACTGGTAATTAAAGATGTC +
Preference number: 6 (lower is better)
Translates to: MLNTVRFKDKLANFH*SFCTTLQRLVIKDV
Trigger: GACATCTTTAATTACCAGTCTCTGCAGAGTGGTACAAAAGCTCAAGTGAAAGTTGGCGAGTTTGTCTTTGAATCTCACAGTGTTCAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS CAA 72 bp GTTGCCAAAATCTCCTTGTTCACAATGTTCTCCTTATaGGAACTTCTCCCAAGCTGTCCCTTTTGTAAGAAT +
Preference number: 6 (lower is better)
Translates to: VAKISLFTMFSL*ELLPSCPFCKN
Trigger: ATTCTTACAAAAGGGACAGCTTGGGAGAAGTTCCAATAAGGAGAACATTGTGAACAAGGAGATTTTGGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS GCA 72 bp ACGAAAAGTAGTATAGAAAGTGGTGTGAACAGCAAGTaGCAGAAGAGAATATGTGTCACCAAATGCAATGAT +
Preference number: 6 (lower is better)
Translates to: TKSSIESGVNSK*QKRICVTKCND
Trigger: ATCATTGCATTTGGTGACACATATTCTCTTCTGGCACTTGCTGTTCACACCACTTTCTATACTACTTTTCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS GCA 72 bp CTGCAGAGACTGGTAATTAAAGATGTCAAACTCGGTTaGCAAAATCTCCTTGTTCACAATGTTCTCCTTATT +
Preference number: 6 (lower is better)
Translates to: LQRLVIKDVKLG*QNLLVHNVLLI
Trigger: AATAAGGAGAACATTGTGAACAAGGAGATTTTGGCAACCGAGTTTGACATCTTTAATTACCAGTCTCTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172199.3
ENSMUST00000232807.2
CDS TCA 72 bp TCTTCTGCTTATTTGGATACTGATCTTCAGGACACTTaGTGCACTGATCCATATCTGTTTCATTTGCAATCT +
Preference number: 6 (lower is better)
Translates to: SSAYLDTDLQDT*CTDPYLFHLQS
Trigger: AGATTGCAAATGAAACAGATATGGATCAGTGCATCAAGTGTCCTGAAGATCAGTATCCAAATAAGCAGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172199.3