Pregenerated sensors for VMN2R2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043897Ensembl transcript IDs: ENSMUST00000077958.5, ENSMUST00000177151.9
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GCAAAAACTCTATCATGCATATATTTGGTCAGCTCTAATAAAGATGCTTTGCACACAAGACAGTTTTACTaGATTATTGTATGGAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: AKTLSCIYLVSSNKDALHTRQFY*IIVWSL Trigger: GAGACTCCATACAATAATGCAGTAAAACTGTCTTGT...GTGCAAAGCATCTTTATTAGAGCTGACCAAATATATGCATGATAGAGTTTTTGC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTCATTACTTCTCAGACAAGAACCCCATAATTTTGATGCAACATGCTGAAATTCTAATCTATGCTGAATaGCTTGTTACAGAACAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: SHYFSDKNPIILMQHAEILIYAE*LVTEQD Trigger: ATCTTGTTCTGTAACAAGCCATTCAGCATAGATTAG...AATTTCAGCATGTTGCATCAAAATTATGGGGTTCTTGTCTGAGAAGTAATGAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGTACGAAGAACATATGTCAGACAAGACAGTTTTACTGCATTATTGTATGGAGTCTATGCTGAATGGCTaGTTACAGAACAAGATATCA | + |
|
Preference number: 3 (lower is better) Translates to: KYEEHMSDKTVLLHYCMESMLNG*LQNKIS Trigger: TGATATCTTGTTCTGTAACAAGCCATTCAGCATAGA...CTCCATACAATAATGCAGTAAAACTGTCTTGTCTGACATATGTTCTTCGTACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR TCA 90 bp | GAACATATGTCAGACAAGACAGTTTTACTGCATTATTGTATGGAGTCTCTGATAAGCCGAGTGCCAGAGTaGTCTGGCGGGCCATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EHMSDKTVLLHYCMESLISRVPE*SGGPCR Trigger: CCTGCATGGCCCGCCAGATCACTCTGGCACTCGGCT...TATCAGAGACTCCATACAATAATGCAGTAAAACTGTCTTGTCTGACATATGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR CCA 90 bp | GAACATATGTCAGACAAGACAGTTTTACTGCATTATTGTATGGAGTCTCTGATACCCCCTTCGGGTCCCTaGAGCACACAGTTTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EHMSDKTVLLHYCMESLIPPSGP*STQFCA Trigger: TGCACAAAACTGTGTGCTCCAGGGACCCGAAGGGGG...TATCAGAGACTCCATACAATAATGCAGTAAAACTGTCTTGTCTGACATATGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR TCA 90 bp | GAATGGCTTGTTACAGAACAAGATATCATTCACCAGGCTAACCTTACACCAACATCTCCAGTGCAGAGCTaGTCAGACATGTCATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: EWLVTEQDIIHQANLTPTSPVQS*SDMSYS Trigger: ACTGTATGACATGTCTGATCAGCTCTGCACTGGAGA...TGTTGGTGTAAGGTTAGCCTGGTGAATGATATCTTGTTCTGTAACAAGCCATTC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR TCA 90 bp | ATCTATGCTGAATGGCTTGTTACAGAACAAGATATCATTCACCAGGCTAACCTTTGCATGGCTTGCCTATaGACAGCAAGGAAGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IYAEWLVTEQDIIHQANLCMACL*TARKTA Trigger: TGCTGTCTTCCTTGCTGTTCATAGGCAAGCCATGCA...AAGGTTAGCCTGGTGAATGATATCTTGTTCTGTAACAAGCCATTCAGCATAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR TCA 90 bp | TCTCATTACTTCTCAGACAAGAACCCCATAATTTTGATGCAACATGCTGAAATTACTGCTCACAGAAGCTaGGGTCAGCTGGATGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SHYFSDKNPIILMQHAEITAHRS*GQLDAP Trigger: AGGAGCATCCAGCTGACCTCAGCTTCTGTGAGCAGT...AATTTCAGCATGTTGCATCAAAATTATGGGGTTCTTGTCTGAGAAGTAATGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR TCA 90 bp | GCTATTCAAAACAGAAGTACGAAGAACATATGTCAGACAAGACAGTTTTACTGCATGACCAGTGACATCTaGATGAGGAAGCTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AIQNRSTKNICQTRQFYCMTSDI*MRKLSS Trigger: GGAGCTGAGCTTCCTCATTCAGATGTCACTGGTCAT...GCAGTAAAACTGTCTTGTCTGACATATGTTCTTCGTACTTCTGTTTTGAATAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR GCA 90 bp | GCTATTCAAAACAGAAGTACGAAGAACATATGTCAGACAAGACAGTTTTACTGCCAACCCCAGAATTCTTaGAGCAGCAACGGACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AIQNRSTKNICQTRQFYCQPQNS*SSNGQG Trigger: TCCTTGTCCGTTGCTGCTGCAAGAATTCTGGGGTTG...GCAGTAAAACTGTCTTGTCTGACATATGTTCTTCGTACTTCTGTTTTGAATAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR GCA 90 bp | AATGTTCAAGTGCTCACCCATAGCAAGACATTTTACCCCCAAATTCTGAGATTCCTCCAACACCAAGTATaGTGCACATACACCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: NVQVLTHSKTFYPQILRFLQHQV*CTYTNL Trigger: GAGATTGGTGTATGTGCAGCATACTTGGTGTTGGAG...GAATCTCAGAATTTGGGGGTAAAATGTCTTGCTATGGGTGAGCACTTGAACATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR TCA 90 bp | GCTATTCAAAACAGAAGTACGAAGAACATATGTCAGACAAGACAGTTTTACTGCCACAGTGATGACCAGTaGCATCTGAATGAGGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AIQNRSTKNICQTRQFYCHSDDQ*HLNEEA Trigger: AGCTTCCTCATTCAGATGTCACTGGTCATCACTGTG...GCAGTAAAACTGTCTTGTCTGACATATGTTCTTCGTACTTCTGTTTTGAATAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR GCA 90 bp | GCTATTCAAAACAGAAGTACGAAGAACATATGTCAGACAAGACAGTTTTACTGCTGCCAAGACCACAAGTaGCCCAAAGATGGACAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AIQNRSTKNICQTRQFYCCQDHK*PKDGQD Trigger: ATCTTGTCCATCTTTGGGGCACTTGTGGTCTTGGCA...GCAGTAAAACTGTCTTGTCTGACATATGTTCTTCGTACTTCTGTTTTGAATAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR GCA 90 bp | GCTATTCAAAACAGAAGTACGAAGAACATATGTCAGACAAGACAGTTTTACTGCATACACAACAGTTACTaGCAAGACCACAAGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AIQNRSTKNICQTRQFYCIHNSY*QDHKCP Trigger: GGGGCACTTGTGGTCTTGGCAGTAACTGTTGTGTAT...GCAGTAAAACTGTCTTGTCTGACATATGTTCTTCGTACTTCTGTTTTGAATAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR GCA 90 bp | CTCTATCATGCATATATTTGGTCAGCTCTAATAAAGATGCTTTGCACTTTGTCAGAGCACACAGTTTTGTaGAGACTGACTCTGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYHAYIWSALIKMLCTLSEHTVL*RLTLEA Trigger: TGCTTCCAGAGTCAGTCTGCACAAAACTGTGTGCTC...TGACAAAGTGCAAAGCATCTTTATTAGAGCTGACCAAATATATGCATGATAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR TCA 90 bp | TCTCATTACTTCTCAGACAAGAACCCCATAATTTTGATGCAACATGCTGAAATTACCATGCCCTCAGACTaGAATTTATCACTGGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SHYFSDKNPIILMQHAEITMPSD*NLSLGV Trigger: AACACCCAGTGATAAATTTCAGTCTGAGGGCATGGT...AATTTCAGCATGTTGCATCAAAATTATGGGGTTCTTGTCTGAGAAGTAATGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR TCA 90 bp | TCTCATTACTTCTCAGACAAGAACCCCATAATTTTGATGCAACATGCTGAAATTTTTCCACAGCCACTTTaGATTTGCCTTTGGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHYFSDKNPIILMQHAEIFPQPL*ICLWCS Trigger: TGAGCACCAAAGGCAAATTCAAAGTGGCTGTGGAAA...AATTTCAGCATGTTGCATCAAAATTATGGGGTTCTTGTCTGAGAAGTAATGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR GCA 90 bp | CTCTATCATGCATATATTTGGTCAGCTCTAATAAAGATGCTTTGCACTTTGTCACAACACCAAGTATGCTaGACATACACCAATCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYHAYIWSALIKMLCTLSQHQVC*TYTNLS Trigger: GGAGAGATTGGTGTATGTGCAGCATACTTGGTGTTG...TGACAAAGTGCAAAGCATCTTTATTAGAGCTGACCAAATATATGCATGATAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR CCA 90 bp | TTACATATTCCCCAATTCAATGTTCAAGTGCTCACCCATAGCAAGACATTTTACGTTCTTGAACATTCTTaGAGGCTCCAACACCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LHIPQFNVQVLTHSKTFYVLEHS*RLQHQV Trigger: TACTTGGTGTTGGAGCCTCCAAGAATGTTCAAGAAC...GTAAAATGTCTTGCTATGGGTGAGCACTTGAACATTGAATTGGGGAATATGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR CCA 90 bp | AATGTTCAAGTGCTCACCCATAGCAAGACATTTTACCCCCAAATTCTGAGATTCGTCAGAGTTATTTGTTaGGATGGTTCTAGAGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NVQVLTHSKTFYPQILRFVRVIC*DGSRVN Trigger: ATTCACTCTAGAACCATCCCAACAAATAACTCTGAC...GAATCTCAGAATTTGGGGGTAAAATGTCTTGCTATGGGTGAGCACTTGAACATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR TCA 90 bp | GCTATTCAAAACAGAAGTACGAAGAACATATGTCAGACAAGACAGTTTTACTGCTACCCATGTGCCAATTaGGGATATCATAATATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AIQNRSTKNICQTRQFYCYPCAN*GYHNIP Trigger: AGGGATATTATGATATCCTCAATTGGCACATGGGTA...GCAGTAAAACTGTCTTGTCTGACATATGTTCTTCGTACTTCTGTTTTGAATAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR TCA 90 bp | GCTATTCAAAACAGAAGTACGAAGAACATATGTCAGACAAGACAGTTTTACTGCGAATTTCAATGTTCTTaGACATTCTTGGAGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AIQNRSTKNICQTRQFYCEFQCS*TFLEAP Trigger: TGGAGCCTCCAAGAATGTTCAAGAACATTGAAATTC...GCAGTAAAACTGTCTTGTCTGACATATGTTCTTCGTACTTCTGTTTTGAATAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR TCA 90 bp | ATCTATGCTGAATGGCTTGTTACAGAACAAGATATCATTCACCAGGCTAACCTTCCAGCATTCCAAAAGTaGTACATTTCCCTTCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: IYAEWLVTEQDIIHQANLPAFQK*YISLHN Trigger: ATTATGAAGGGAAATGTATCACTTTTGGAATGCTGG...AAGGTTAGCCTGGTGAATGATATCTTGTTCTGTAACAAGCCATTCAGCATAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR TCA 90 bp | GCTATTCAAAACAGAAGTACGAAGAACATATGTCAGACAAGACAGTTTTACTGCCATGTCACATTCTCTTaGGCATGTAATTCAACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AIQNRSTKNICQTRQFYCHVTFS*ACNSTH Trigger: ATGGGTTGAATTACATGCTCAAGAGAATGTGACATG...GCAGTAAAACTGTCTTGTCTGACATATGTTCTTCGTACTTCTGTTTTGAATAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR TCA 90 bp | AAGTACGAAGAACATATGTCAGACAAGACAGTTTTACTGCATTATTGTATGGAGCATATCCAGACAAATTaGACTTGCGCAGCAATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KYEEHMSDKTVLLHYCMEHIQTN*TCAAIC Trigger: GCAAATTGCTGCGCAAGTTCAATTTGTCTGGATATG...CTCCATACAATAATGCAGTAAAACTGTCTTGTCTGACATATGTTCTTCGTACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR GCA 90 bp | TCTCATTACTTCTCAGACAAGAACCCCATAATTTTGATGCAACATGCTGAAATTTGTGTCACTAAGAACTaGACAGGAAGAAGTATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SHYFSDKNPIILMQHAEICVTKN*TGRSIA Trigger: GGCTATACTTCTTCCTGTGCAGTTCTTAGTGACACA...AATTTCAGCATGTTGCATCAAAATTATGGGGTTCTTGTCTGAGAAGTAATGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR GCA 90 bp | GCAAAAACTCTATCATGCATATATTTGGTCAGCTCTAATAAAGATGCTTTGCACACTTGCGCAGCAATTTaGATGTCACATTCTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AKTLSCIYLVSSNKDALHTCAAI*MSHSLE Trigger: CTCAAGAGAATGTGACATGCAAATTGCTGCGCAAGT...GTGCAAAGCATCTTTATTAGAGCTGACCAAATATATGCATGATAGAGTTTTTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR CCA 90 bp | AAGTACGAAGAACATATGTCAGACAAGACAGTTTTACTGCATTATTGTATGGAGGGTCAAGACATCATTTaGATTCTTGCTAGGGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KYEEHMSDKTVLLHYCMEGQDII*ILARVY Trigger: GTACACCCTAGCAAGAATCCAAATGATGTCTTGACC...CTCCATACAATAATGCAGTAAAACTGTCTTGTCTGACATATGTTCTTCGTACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR TCA 90 bp | GCTATTCAAAACAGAAGTACGAAGAACATATGTCAGACAAGACAGTTTTACTGCGAGGTCAATGTCAGTTaGAAAAAGCACAATGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: AIQNRSTKNICQTRQFYCEVNVS*KKHNDF Trigger: AAAGTCATTGTGCTTTTTTCAACTGACATTGACCTC...GCAGTAAAACTGTCTTGTCTGACATATGTTCTTCGTACTTCTGTTTTGAATAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR TCA 90 bp | TTACATATTCCCCAATTCAATGTTCAAGTGCTCACCCATAGCAAGACATTTTACAAAGTCAGGTATATGTaGACATGCTGTATCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHIPQFNVQVLTHSKTFYKVRYM*TCCIIP Trigger: AGGAATGATACAGCATGTTCACATATACCTGACTTT...GTAAAATGTCTTGCTATGGGTGAGCACTTGAACATTGAATTGGGGAATATGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR TCA 90 bp | GCAAAAACTCTATCATGCATATATTTGGTCAGCTCTAATAAAGATGCTTTGCACAAGAGATCCAGACAATaGAAAAGACCAGCATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AKTLSCIYLVSSNKDALHKRSRQ*KRPAFQ Trigger: TTGGAATGCTGGTCTTTTTCATTGTCTGGATCTCTT...GTGCAAAGCATCTTTATTAGAGCTGACCAAATATATGCATGATAGAGTTTTTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR GCA 90 bp | GTACGAAGAACATATGTCAGACAAGACAGTTTTACTGCATTATTGTATGGAGTCATAATCATCATCAGATaGAATAGTACCTACCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VRRTYVRQDSFTALLYGVIIIIR*NSTYPD Trigger: GTCTGGGTAGGTACTATTGCATCTGATGATGATTAT...GACTCCATACAATAATGCAGTAAAACTGTCTTGTCTGACATATGTTCTTCGTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR CCA 90 bp | TTACATATTCCCCAATTCAATGTTCAAGTGCTCACCCATAGCAAGACATTTTACAATGGAGTGTGTCTGTaGATTACATACACAACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LHIPQFNVQVLTHSKTFYNGVCL*ITYTTV Trigger: AACTGTTGTGTATGTAATCCACAGACACACTCCATT...GTAAAATGTCTTGCTATGGGTGAGCACTTGAACATTGAATTGGGGAATATGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR TCA 90 bp | GAACATATGTCAGACAAGACAGTTTTACTGCATTATTGTATGGAGTCTCTGATATTTATCACTGGGTGTTaGGCGATAAAAAGATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EHMSDKTVLLHYCMESLIFITGC*AIKRWK Trigger: TTTCCATCTTTTTATCGCTCAACACCCAGTGATAAA...TATCAGAGACTCCATACAATAATGCAGTAAAACTGTCTTGTCTGACATATGTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR CCA 90 bp | GTACGAAGAACATATGTCAGACAAGACAGTTTTACTGCATTATTGTATGGAGTCTTTGCATTTTCTCATTaGAGTAGACTTTTGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VRRTYVRQDSFTALLYGVFAFSH*SRLLEW Trigger: CCATTCCAAAAGTCTACTCCAATGAGAAAATGCAAA...GACTCCATACAATAATGCAGTAAAACTGTCTTGTCTGACATATGTTCTTCGTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS TCA 90 bp | AACAGTGGACACTGTGGTGCTGTTAAGCTCACTGCTCACAGAAGCTaGGGTCAGCTGGATGCTCCTGTCAACAGTGGGGACTCTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: NSGHCGAVKLTAHRS*GQLDAPVNSGDSST Trigger: GGTGGAAGAGTCCCCACTGTTGACAGGAGCATCCAGCTGACCTCAGCTTCTGTGAGCAGTGAGCTTAACAGCACCACAGTGTCCACTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS TCA 90 bp | TGGCTTGCCTATGAACAGCAAGGAAGACAGCACAGTGATGACCAGTaGCATCTGAATGAGGAAGCTCAGCTCCCGGTCATTGGCTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: WLAYEQQGRQHSDDQ*HLNEEAQLPVIGFH Trigger: GTGAAAGCCAATGACCGGGAGCTGAGCTTCCTCATTCAGATGTCACTGGTCATCACTGTGCTGTCTTCCTTGCTGTTCATAGGCAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS TCA 90 bp | CCTATGAACAGCAAGGAAGACAGCACAGTGATGACCAGTGACATCTaGATGAGGAAGCTCAGCTCCCGGTCATTGGCTTTCACCAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: PMNSKEDSTVMTSDI*MRKLSSRSLAFTNG Trigger: TCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTTCCTCATTCAGATGTCACTGGTCATCACTGTGCTGTCTTCCTTGCTGTTCATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS CCA 90 bp | AAGCTCAGCTCCCGGTCATTGGCTTTCACCAATGGAGTGTGTCTGTaGATTACATACACAACAGTTACTGCCAAGACCACAAGTGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KLSSRSLAFTNGVCL*ITYTTVTAKTTSAP Trigger: TGGGGCACTTGTGGTCTTGGCAGTAACTGTTGTGTATGTAATCCACAGACACACTCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS GCA 90 bp | CACAAGTGCCCCAAAGATGGACAAGATGACAAGAGTGAACCCCAGTaGCTCTCCATAAGCAAGGAATTCCACAAGCTTTGGCACACACTT | + |
|
Preference number: 5 (lower is better) Translates to: HKCPKDGQDDKSEPQ*LSISKEFHKLWHTL Trigger: AAGTGTGTGCCAAAGCTTGTGGAATTCCTTGCTTATGGAGAGGCACTGGGGTTCACTCTTGTCATCTTGTCCATCTTTGGGGCACTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS GCA 90 bp | GTGTCTGTGGATTACATACACAACAGTTACTGCCAAGACCACAAGTaGCCCAAAGATGGACAAGATGACAAGAGTGAACCCCAGTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VSVDYIHNSYCQDHK*PKDGQDDKSEPQCL Trigger: GAGGCACTGGGGTTCACTCTTGTCATCTTGTCCATCTTTGGGGCACTTGTGGTCTTGGCAGTAACTGTTGTGTATGTAATCCACAGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS CCA 90 bp | CAAGGAATTCCACAAGCTTTGGCACACACTTGCTCTTCTCTGCATTaGACCAGTCATCTTCACCGCATGGATCACATTCTCTTTGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QGIPQALAHTCSSLH*TSHLHRMDHILFVL Trigger: CAGGACAAAGAGAATGTGATCCATGCGGTGAAGATGACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCTTGTGGAATTCCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS GCA 90 bp | ATAAGCAAGGAATTCCACAAGCTTTGGCACACACTTGCTCTTCTCTaGATTGGACCAGTCATCTTCACCGCATGGATCACATTCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ISKEFHKLWHTLALL*IGPVIFTAWITFSL Trigger: CAAAGAGAATGTGATCCATGCGGTGAAGATGACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCTTGTGGAATTCCTTGCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS GCA 90 bp | TTTCACCAATGGAGTGTGTCTGTGGATTACATACACAACAGTTACTaGCAAGACCACAAGTGCCCCAAAGATGGACAAGATGACAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FHQWSVSVDYIHNSY*QDHKCPKDGQDDKS Trigger: ACTCTTGTCATCTTGTCCATCTTTGGGGCACTTGTGGTCTTGGCAGTAACTGTTGTGTATGTAATCCACAGACACACTCCATTGGTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS GCA 90 bp | AATTTCAATGTTCTTGAACATTCTTGGAGGCTCCAACACCAAGTATaGTGCACATACACCAATCTCTCCTACAACGCAGACCAGTACAAT | + |
|
Preference number: 5 (lower is better) Translates to: NFNVLEHSWRLQHQV*CTYTNLSYNADQYN Trigger: ATTGTACTGGTCTGCGTTGTAGGAGAGATTGGTGTATGTGCAGCATACTTGGTGTTGGAGCCTCCAAGAATGTTCAAGAACATTGAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS-3UTR CAA 90 bp | GAATGGCTTGTTACAGAACAAGATATCATTCACCAGGCTAACCTTACACCAACACTAAAGCAGTCTCCATaGCTTTGGAGACAGAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: EWLVTEQDIIHQANLTPTLKQSP*LWRQRN Trigger: GTTTCTCTGTCTCCAAAGCAATGGAGACTGCTTTAG...TGTTGGTGTAAGGTTAGCCTGGTGAATGATATCTTGTTCTGTAACAAGCCATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR CAA 90 bp | GCAAAAACTCTATCATGCATATATTTGGTCAGCTCTAATAAAGATGCTTTGCACACAACCCCAGAATTCTaGCAGCAGCAACGGACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AKTLSCIYLVSSNKDALHTTPEF*QQQRTR Trigger: CCTTGTCCGTTGCTGCTGCAAGAATTCTGGGGTTGT...GTGCAAAGCATCTTTATTAGAGCTGACCAAATATATGCATGATAGAGTTTTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS TCA 90 bp | ATGATGAATCACTTCCAGCACAAATGGGCCGAGGTCAATGTCAGTTaGAAAAAGCACAATGACTTTGGCAGTGGAACTTTTTATTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: MMNHFQHKWAEVNVS*KKHNDFGSGTFYCL Trigger: AAGGCAATAAAAAGTTCCACTGCCAAAGTCATTGTGCTTTTTTCAACTGACATTGACCTCGGCCCATTTGTGCTGGAAGTGATTCATCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS-3UTR CAA 90 bp | AATGTTCAAGTGCTCACCCATAGCAAGACATTTTACCCCCAAATTCTGAGATTCCTGACTCTGGAAGCATaGAAGATTCAGTGTTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: NVQVLTHSKTFYPQILRFLTLEA*KIQCSK Trigger: TTTGGAACACTGAATCTTCAATGCTTCCAGAGTCAG...GAATCTCAGAATTTGGGGGTAAAATGTCTTGCTATGGGTGAGCACTTGAACATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR CAA 90 bp | CTCTATCATGCATATATTTGGTCAGCTCTAATAAAGATGCTTTGCACTTTGTCACTGGAGCACACAGTTTaGTGCAGACTGACTCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LYHAYIWSALIKMLCTLSLEHTV*CRLTLE Trigger: TTCCAGAGTCAGTCTGCACAAAACTGTGTGCTCCAG...TGACAAAGTGCAAAGCATCTTTATTAGAGCTGACCAAATATATGCATGATAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS TCA 90 bp | CCAGACAAATTGAACTTGCGCAGCAATTTGCATGTCACATTCTCTTaGGCATGTAATTCAACCCATAGAAATACAGTTAACCCCAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: PDKLNLRSNLHVTFS*ACNSTHRNTVNPRI Trigger: GATTCTGGGGTTAACTGTATTTCTATGGGTTGAATTACATGCTCAAGAGAATGTGACATGCAAATTGCTGCGCAAGTTCAATTTGTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS TCA 90 bp | GATACGGGTACTTCGTCAGAGTTATTTGTTGGGATGGTTCTAGAGTaGATAGGAAATAGTCCTCCAATAACCATAGAATGGTTTTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: DTGTSSELFVGMVLE*IGNSPPITIEWFSA Trigger: AGCTGAAAACCATTCTATGGTTATTGGAGGACTATTTCCTATTCACTCTAGAACCATCCCAACAAATAACTCTGACGAAGTACCCGTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR CAA 90 bp | CACCAGGCTAACCTTACACCAACACAGCCACAACTAATATTAACCTACAACATCTTTGTGGATGTGTATTaGTATTCTCCAACCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: HQANLTPTQPQLILTYNIFVDVY*YSPTLT Trigger: TGTCAAGGTTGGAGAATACAAATACACATCCACAAA...GATGTTGTAGGTTAATATTAGTTGTGGCTGTGTTGGTGTAAGGTTAGCCTGGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS GCA 90 bp | TTCCCTAAGGGATTTTACTCCATATTTTCCATAATCATCATCAGATaGAATAGTACCTACCCAGACCCAACCAAAGTGTTGGATAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: FPKGFYSIFSIIIIR*NSTYPDPTKVLDKT Trigger: AGTCTTATCCAACACTTTGGTTGGGTCTGGGTAGGTACTATTGCATCTGATGATGATTATGGAAAATATGGAGTAAAATCCCTTAGGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS-3UTR CAA 90 bp | TTACATATTCCCCAATTCAATGTTCAAGTGCTCACCCATAGCAAGACATTTTACAAAGCAACACAGAGGTaGACAAACTCCATTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LHIPQFNVQVLTHSKTFYKATQR*TNSILS Trigger: GGAAAGAATGGAGTTTGTCAACCTCTGTGTTGCTTT...GTAAAATGTCTTGCTATGGGTGAGCACTTGAACATTGAATTGGGGAATATGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS-3UTR CAA 90 bp | GCAAAAACTCTATCATGCATATATTTGGTCAGCTCTAATAAAGATGCTTTGCACTTTCTAAAATTGGGCTaGTTTTCTTCCTGTCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: AKTLSCIYLVSSNKDALHFLKLG*FSSCPV Trigger: TACAGGACAGGAAGAAAACAAGCCCAATTTTAGAAA...GTGCAAAGCATCTTTATTAGAGCTGACCAAATATATGCATGATAGAGTTTTTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS CCA 72 bp | GACAGACAAAGGCAAAAGCCGAGTGCCAGAGTGATCTaGCGGGCCATGCAGGACCAGTTGCATGGCTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: DRQRQKPSARVI*RAMQDQLHGLP Trigger: AGGCAAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCACTCTGGCACTCGGCTTTTGCCTTTGTCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS TCA 72 bp | TGGAAGACAGACAAAGGCAAAAGCCGAGTGCCAGAGTaGTCTGGCGGGCCATGCAGGACCAGTTGCATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: WKTDKGKSRVPE*SGGPCRTSCMA Trigger: AGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCACTCTGGCACTCGGCTTTTGCCTTTGTCTGTCTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS CAA 90 bp | AGTGCCAGAGTGATCTGGCGGGCCATGCAGGACCAGTTGCATGGCTaGCCTATGAACAGCAAGGAAGACAGCACAGTGATGACCAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SARVIWRAMQDQLHG*PMNSKEDSTVMTSD Trigger: GTCACTGGTCATCACTGTGCTGTCTTCCTTGCTGTTCATAGGCAAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCACTCTGGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS CAA 72 bp | AGCCCACCTGAGGAATGTAATACAACCCCAGAATTCTaGCAGCAGCAACGGACAAGGAGGAGCCTCCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SPPEECNTTPEF*QQQRTRRSLLL Trigger: GAGCAGGAGGCTCCTCCTTGTCCGTTGCTGCTGCAAGAATTCTGGGGTTGTATTACATTCCTCAGGTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS TCA 72 bp | AGCAAGGAAGACAGCACAGTGATGACCAGTGACATCTaGATGAGGAAGCTCAGCTCCCGGTCATTGGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SKEDSTVMTSDI*MRKLSSRSLAF Trigger: GAAAGCCAATGACCGGGAGCTGAGCTTCCTCATTCAGATGTCACTGGTCATCACTGTGCTGTCTTCCTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS GCA 72 bp | GAATCCCCCTTCGGGTCCCTGGAGCACACAGTTTTGTaGAGACTGACTCTGGAAGCATTGAAGATTCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: ESPFGSLEHTVL*RLTLEALKIQC Trigger: ACACTGAATCTTCAATGCTTCCAGAGTCAGTCTGCACAAAACTGTGTGCTCCAGGGACCCGAAGGGGGATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS TCA 72 bp | TATGAACAGCAAGGAAGACAGCACAGTGATGACCAGTaGCATCTGAATGAGGAAGCTCAGCTCCCGGTCATT | + |
|
Preference number: 6 (lower is better) Translates to: YEQQGRQHSDDQ*HLNEEAQLPVI Trigger: AATGACCGGGAGCTGAGCTTCCTCATTCAGATGTCACTGGTCATCACTGTGCTGTCTTCCTTGCTGTTCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS GCA 72 bp | AATTCTTGCAGCAGCAACGGACAAGGAGGAGCCTCCTaGTCCAATAATTCCTACGAGATATTTCCCAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: NSCSSNGQGGAS*SNNSYEIFPSA Trigger: AGCACTGGGAAATATCTCGTAGGAATTATTGGAGCAGGAGGCTCCTCCTTGTCCGTTGCTGCTGCAAGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS GCA 72 bp | CTTGAACATTCTTGGAGGCTCCAACACCAAGTATGCTaGACATACACCAATCTCTCCTACAACGCAGACCAG | + |
|
Preference number: 6 (lower is better) Translates to: LEHSWRLQHQVC*TYTNLSYNADQ Trigger: CTGGTCTGCGTTGTAGGAGAGATTGGTGTATGTGCAGCATACTTGGTGTTGGAGCCTCCAAGAATGTTCAAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS CCA 72 bp | GAGGAAGCTCAGCTCCCGGTCATTGGCTTTCACCAATaGAGTGTGTCTGTGGATTACATACACAACAGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: EEAQLPVIGFHQ*SVSVDYIHNSY Trigger: GTAACTGTTGTGTATGTAATCCACAGACACACTCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS CAA 90 bp | GCAAGGAATTCCACAAGCTTTGGCACACACTTGCTCTTCTCTGCATaGGACCAGTCATCTTCACCGCATGGATCACATTCTCTTTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ARNSTSFGTHLLFSA*DQSSSPHGSHSLCP Trigger: AGGACAAAGAGAATGTGATCCATGCGGTGAAGATGACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCTTGTGGAATTCCTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS GCA 72 bp | GTTCTTGAACATTCTTGGAGGCTCCAACACCAAGTATaGTGCACATACACCAATCTCTCCTACAACGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: VLEHSWRLQHQV*CTYTNLSYNAD Trigger: GTCTGCGTTGTAGGAGAGATTGGTGTATGTGCAGCATACTTGGTGTTGGAGCCTCCAAGAATGTTCAAGAAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS CCA 72 bp | TCCCGGTCATTGGCTTTCACCAATGGAGTGTGTCTGTaGATTACATACACAACAGTTACTGCCAAGACCACA | + |
|
Preference number: 6 (lower is better) Translates to: SRSLAFTNGVCL*ITYTTVTAKTT Trigger: TGTGGTCTTGGCAGTAACTGTTGTGTATGTAATCCACAGACACACTCCATTGGTGAAAGCCAATGACCGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS GCA 72 bp | TGGAGTGTGTCTGTGGATTACATACACAACAGTTACTaGCAAGACCACAAGTGCCCCAAAGATGGACAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: WSVSVDYIHNSY*QDHKCPKDGQD Trigger: ATCTTGTCCATCTTTGGGGCACTTGTGGTCTTGGCAGTAACTGTTGTGTATGTAATCCACAGACACACTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS CAA 90 bp | GGGTCCCTGGAGCACACAGTTTTGTGCAGACTGACTCTGGAAGCATaGAAGATTCAGTGTTCCAAAACAATGATGAGTTCTTTGGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GSLEHTVLCRLTLEA*KIQCSKTMMSSLEE Trigger: TTCTTCCAAAGAACTCATCATTGTTTTGGAACACTGAATCTTCAATGCTTCCAGAGTCAGTCTGCACAAAACTGTGTGCTCCAGGGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS TCA 72 bp | CACTTCCAGCACAAATGGGCCGAGGTCAATGTCAGTTaGAAAAAGCACAATGACTTTGGCAGTGGAACTTTT | + |
|
Preference number: 6 (lower is better) Translates to: HFQHKWAEVNVS*KKHNDFGSGTF Trigger: AAAAGTTCCACTGCCAAAGTCATTGTGCTTTTTTCAACTGACATTGACCTCGGCCCATTTGTGCTGGAAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS TCA 72 bp | TTAAGATCTTCCAGCTTCTCCTCTCCAGTGCAGAGCTaGTCAGACATGTCATACAGTCTGTCTTCTTTACCA | + |
|
Preference number: 6 (lower is better) Translates to: LRSSSFSSPVQS*SDMSYSLSSLP Trigger: TGGTAAAGAAGACAGACTGTATGACATGTCTGATCAGCTCTGCACTGGAGAGGAGAAGCTGGAAGATCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS CAA 90 bp | ATTGTAAGGCACACTGCTGTTGGGCCAGGTACAGTTAAAAGCAGTTaGCCAGAATTCAATGGTCAAGACATCATTTGGATTCTTGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: IVRHTAVGPGTVKSS*PEFNGQDIIWILAR Trigger: CCTAGCAAGAATCCAAATGATGTCTTGACCATTGAATTCTGGCAAACTGCTTTTAACTGTACCTGGCCCAACAGCAGTGTGCCTTACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS CAA 72 bp | GAGCACACAGTTTTGTGCAGACTGACTCTGGAAGCATaGAAGATTCAGTGTTCCAAAACAATGATGAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: EHTVLCRLTLEA*KIQCSKTMMSS Trigger: AGAACTCATCATTGTTTTGGAACACTGAATCTTCAATGCTTCCAGAGTCAGTCTGCACAAAACTGTGTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS CAA 90 bp | AGAACAAGTTCAGATTTTGTGGATGTGTATTTGTATTCTCCAACCTaGACAAAGGTGATTTCTCCAGTATTACCCATGTGCCAATTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RTSSDFVDVYLYSPT*TKVISPVLPMCQLR Trigger: CCTCAATTGGCACATGGGTAATACTGGAGAAATCACCTTTGTCAAGGTTGGAGAATACAAATACACATCCACAAAATCTGAACTTGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS TCA 72 bp | ACTTCGTCAGAGTTATTTGTTGGGATGGTTCTAGAGTaGATAGGAAATAGTCCTCCAATAACCATAGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: TSSELFVGMVLE*IGNSPPITIEW Trigger: CCATTCTATGGTTATTGGAGGACTATTTCCTATTCACTCTAGAACCATCCCAACAAATAACTCTGACGAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS CCA 72 bp | AGCAGTTTGCCAGAATTCAATGGTCAAGACATCATTTaGATTCTTGCTAGGGTGTACATCATAAAGGAATTC | + |
|
Preference number: 6 (lower is better) Translates to: SSLPEFNGQDII*ILARVYIIKEF Trigger: GAATTCCTTTATGATGTACACCCTAGCAAGAATCCAAATGATGTCTTGACCATTGAATTCTGGCAAACTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS CAA 72 bp | TCAGATTTTGTGGATGTGTATTTGTATTCTCCAACCTaGACAAAGGTGATTTCTCCAGTATTACCCATGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SDFVDVYLYSPT*TKVISPVLPMC Trigger: GCACATGGGTAATACTGGAGAAATCACCTTTGTCAAGGTTGGAGAATACAAATACACATCCACAAAATCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS TCA 72 bp | TTGAACTTGCGCAGCAATTTGCATGTCACATTCTCTTaGGCATGTAATTCAACCCATAGAAATACAGTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: LNLRSNLHVTFS*ACNSTHRNTVN Trigger: GTTAACTGTATTTCTATGGGTTGAATTACATGCTCAAGAGAATGTGACATGCAAATTGCTGCGCAAGTTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS CAA 72 bp | ATAGAATGGTTTTCAGCTTCTACATATCCAGACAAATaGAACTTGCGCAGCAATTTGCATGTCACATTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: IEWFSASTYPDK*NLRSNLHVTFS Trigger: AGAGAATGTGACATGCAAATTGCTGCGCAAGTTCAATTTGTCTGGATATGTAGAAGCTGAAAACCATTCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177151.9 |
||
| CDS CAA 90 bp | CTGGAAGCATTGAAGATTCAGTGTTCCAAAACAATGATGAGTTCTTaGGAAGAACAAGTTCAGATTTTGTGGATGTGTATTTGTATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LEALKIQCSKTMMSS*EEQVQILWMCICIL Trigger: GAGAATACAAATACACATCCACAAAATCTGAACTTGTTCTTCCAAAGAACTCATCATTGTTTTGGAACACTGAATCTTCAATGCTTCCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||
| CDS CAA 72 bp | TTTGGAAGAACAAGTTCAGATTTTGTGGATGTGTATTaGTATTCTCCAACCTTGACAAAGGTGATTTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FGRTSSDFVDVY*YSPTLTKVISP Trigger: TGGAGAAATCACCTTTGTCAAGGTTGGAGAATACAAATACACATCCACAAAATCTGAACTTGTTCTTCCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077958.5 ENSMUST00000177151.9 |
||