Pregenerated sensors for VMN2R19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091260Ensembl transcript IDs: ENSMUST00000073948.7
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTGGGCAATGGCATACACAGCAGCATGGACTTTGGAGCTATAGGGTaGGGTATTCATATCCCAAACATGCAGAGGTCGTGTGCTCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: LGNGIHSSMDFGAIG*GIHIPNMQRSCAQA Trigger: AGCCTGAGCACACGACCTCTGCATGTTTGGGATATGAATACCTCACCCTATAGCTCCAAAGTCCATGCTGCTGTGTATGCCATTGCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 90 bp | CTTTTATCAAGTGAGTCTCCTGCCATTCTGAGTGACAGCTCCTCATaGAGTGCCTGGGCAATGGCATACACAGCAGCATGGACTTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: LLSSESPAILSDSSS*SAWAMAYTAAWTLE Trigger: CTCCAAAGTCCATGCTGCTGTGTATGCCATTGCCCAGGCACTCCATGAGGAGCTGTCACTCAGAATGGCAGGAGACTCACTTGATAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS TCA 90 bp | GGGAAAGGGGGATATGTCCCCAGCCAGACTGCACAGATGCACACTTaGATGATGGAACCACAGCAGACTATAGCATATGAAAGTCGGATC | + |
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Preference number: 5 (lower is better) Translates to: GKGGYVPSQTAQMHT*MMEPQQTIAYESRI Trigger: GATCCGACTTTCATATGCTATAGTCTGCTGTGGTTCCATCATTCAAGTGTGCATCTGTGCAGTCTGGCTGGGGACATATCCCCCTTTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 90 bp | CAAACTTGGTTGCGGAAACCTCCTTGTTCCCAACGTTCTCCTCATTaGTGCTTCTCCCAAAACGGCCTTTTTGTAAGAATGGATGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: QTWLRKPPCSQRSPH*CFSQNGLFVRMDGA Trigger: AGCTCCATCCATTCTTACAAAAAGGCCGTTTTGGGAGAAGCACCAATGAGGAGAACGTTGGGAACAAGGAGGTTTCCGCAACCAAGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS GCA 90 bp | AGAGACTTAGAACTCGGGAGATCTGAGTTGATATTCCTGTTGAAATaGCTCCTATCACTGCAACCAGCTTATCAGTCTTCTCAGGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: RDLELGRSELIFLLK*LLSLQPAYQSSQAC Trigger: GCAGGCCTGAGAAGACTGATAAGCTGGTTGCAGTGATAGGAGGCATTTCAACAGGAATATCAACTCAGATCTCCCGAGTTCTAAGTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 90 bp | ATTTGGTACTGCTTGGCAGAGAATGGTAATTTAAGATGTCAAACTTaGTTGCGGAAACCTCCTTGTTCCCAACGTTCTCCTCATTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: IWYCLAENGNLRCQT*LRKPPCSQRSPHWC Trigger: GCACCAATGAGGAGAACGTTGGGAACAAGGAGGTTTCCGCAACCAAGTTTGACATCTTAAATTACCATTCTCTGCCAAGCAGTACCAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS GCA 90 bp | CTCAGGCTGCCATTTGGCTCACATTTACTTGGTTCCCTGACTTTCTaGCAATACAAATATGGACATTCAAATAAGATGGACCACACATCC | + |
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Preference number: 5 (lower is better) Translates to: LRLPFGSHLLGSLTF*QYKYGHSNKMDHTS Trigger: GGATGTGTGGTCCATCTTATTTGAATGTCCATATTTGTATTGGCAGAAAGTCAGGGAACCAAGTAAATGTGAGCCAAATGGCAGCCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 90 bp | TGCAACCTCTCCATCTGCACATGGCAGACAATCAAAGCAACAAAATaGTTTCCCTTCAACAGGTGTTTTCCTATATCCAAGTGGACAACT | + |
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Preference number: 5 (lower is better) Translates to: CNLSICTWQTIKATK*FPFNRCFPISKWTT Trigger: AGTTGTCCACTTGGATATAGGAAAACACCTGTTGAAGGGAAACCATTTTGTTGCTTTGATTGTCTGCCATGTGCAGATGGAGAGGTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS GCA 90 bp | GAGATTCAAAGACAAACTCGCCAACCTTTACTTGAGATTTGGTACTaGTTGGCAGAGAATGGTAATTTAAGATGTCAAACTTGGTTGCGG | + |
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Preference number: 5 (lower is better) Translates to: EIQRQTRQPLLEIWY*LAENGNLRCQTWLR Trigger: CCGCAACCAAGTTTGACATCTTAAATTACCATTCTCTGCCAAGCAGTACCAAATCTCAAGTAAAGGTTGGCGAGTTTGTCTTTGAATCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS GCA 90 bp | CTTGATACATTGATCCATATCTGTTTCATTTGCAACCTCTCCATCTaGACATGGCAGACAATCAAAGCAACAAAATGGTTTCCCTTCAAC | + |
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Preference number: 5 (lower is better) Translates to: LDTLIHICFICNLSI*TWQTIKATKWFPFN Trigger: GTTGAAGGGAAACCATTTTGTTGCTTTGATTGTCTGCCATGTGCAGATGGAGAGGTTGCAAATGAAACAGATATGGATCAATGTATCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 90 bp | CCAGGAGAAGCAGGTATACTTAAGGAGAAACAAGACATTTGTTCCTaGAACACAATGAGAATAATCCAGAGAGAGAAGGCAATGAGTAAT | + |
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Preference number: 5 (lower is better) Translates to: PGEAGILKEKQDICS*NTMRIIQREKAMSN Trigger: ATTACTCATTGCCTTCTCTCTCTGGATTATTCTCATTGTGTTCCAGGAACAAATGTCTTGTTTCTCCTTAAGTATACCTGCTTCTCCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 90 bp | CAGTGTGAGATTCAAAGACAAACTCGCCAACCTTTACTTGAGATTTaGTACTGCTTGGCAGAGAATGGTAATTTAAGATGTCAAACTTGG | + |
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Preference number: 5 (lower is better) Translates to: QCEIQRQTRQPLLEI*YCLAENGNLRCQTW Trigger: CCAAGTTTGACATCTTAAATTACCATTCTCTGCCAAGCAGTACCAAATCTCAAGTAAAGGTTGGCGAGTTTGTCTTTGAATCTCACACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS GCA 90 bp | TTTCCTGTTTACTGTGTCTTTAGCAGGAAATTCTGGAACTTTTTCTaGAAATGCAACGCAAATTCCTTGGTTCTTTATCTCCTCTGTGAT | + |
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Preference number: 5 (lower is better) Translates to: FPVYCVFSRKFWNFF*KCNANSLVLYLLCD Trigger: ATCACAGAGGAGATAAAGAACCAAGGAATTTGCGTTGCATTTGCAGAAAAAGTTCCAGAATTTCCTGCTAAAGACACAGTAAACAGGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 90 bp | TTCCATAAAACGTTTCCTGTTTACTGTGTCTTTAGCAGGAAATTCTaGAACTTTTTCTGCAAATGCAACGCAAATTCCTTGGTTCTTTAT | + |
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Preference number: 5 (lower is better) Translates to: FHKTFPVYCVFSRKF*NFFCKCNANSLVLY Trigger: ATAAAGAACCAAGGAATTTGCGTTGCATTTGCAGAAAAAGTTCCAGAATTTCCTGCTAAAGACACAGTAAACAGGAAACGTTTTATGGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 72 bp | CCTGCCATTCTGAGTGACAGCTCCTCATGGAGTGCCTaGGCAATGGCATACACAGCAGCATGGACTTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: PAILSDSSSWSA*AMAYTAAWTLE Trigger: CTCCAAAGTCCATGCTGCTGTGTATGCCATTGCCCAGGCACTCCATGAGGAGCTGTCACTCAGAATGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 72 bp | AGTGAGTCTCCTGCCATTCTGAGTGACAGCTCCTCATaGAGTGCCTGGGCAATGGCATACACAGCAGCATGG | + |
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Preference number: 6 (lower is better) Translates to: SESPAILSDSSS*SAWAMAYTAAW Trigger: CCATGCTGCTGTGTATGCCATTGCCCAGGCACTCCATGAGGAGCTGTCACTCAGAATGGCAGGAGACTCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS TCA 72 bp | CTCTGGTCCCAAGGCTCTGGTCAAAAGGAGCATAGCTaGTCTGTGGGATGTTGTAGAGACTTAGAACTCGGG | + |
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Preference number: 6 (lower is better) Translates to: LWSQGSGQKEHS*SVGCCRDLELG Trigger: CCCGAGTTCTAAGTCTCTACAACATCCCACAGATCAGCTATGCTCCTTTTGACCAGAGCCTTGGGACCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 72 bp | CCAAACATGCAGAGGTCGTGTGCTCAGGCTGCCATTTaGCTCACATTTACTTGGTTCCCTGACTTTCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: PNMQRSCAQAAI*LTFTWFPDFLP Trigger: TGGCAGAAAGTCAGGGAACCAAGTAAATGTGAGCCAAATGGCAGCCTGAGCACACGACCTCTGCATGTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 72 bp | GATGTCCCTAAGGAAGAATTCTCCCCTCATATCATCTaGAACCACCAGGGCAACCCAGACCCAAGTGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: DVPKEEFSPHII*NHQGNPDPSEV Trigger: TACTTCACTTGGGTCTGGGTTGCCCTGGTGGTTCCAGATGATATGAGGGGAGAATTCTTCCTTAGGGACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS TCA 72 bp | GGCATACACAGCAGCATGGACTTTGGAGCTATAGGGTaGGGTATTCATATCCCAAACATGCAGAGGTCGTGT | + |
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Preference number: 6 (lower is better) Translates to: GIHSSMDFGAIG*GIHIPNMQRSC Trigger: ACACGACCTCTGCATGTTTGGGATATGAATACCTCACCCTATAGCTCCAAAGTCCATGCTGCTGTGTATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS GCA 72 bp | TCATTACACCAGAGGATGATTTGCCCAAACTCTGAGTaGATGTCAACATCAGGGAAAGGGGGATATGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: SLHQRMICPNSE*MSTSGKGGYVP Trigger: GGGGACATATCCCCCTTTCCCTGATGTTGACATGCACTCAGAGTTTGGGCAAATCATCCTCTGGTGTAATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 72 bp | GTGCCTGGGCAATGGCATACACAGCAGCATGGACTTTaGAGCTATAGGGTGAGGTATTCATATCCCAAACAT | + |
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Preference number: 6 (lower is better) Translates to: VPGQWHTQQHGL*SYRVRYSYPKH Trigger: ATGTTTGGGATATGAATACCTCACCCTATAGCTCCAAAGTCCATGCTGCTGTGTATGCCATTGCCCAGGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CAA 90 bp | TCAAACTTGGTTGCGGAAACCTCCTTGTTCCCAACGTTCTCCTCATaGGTGCTTCTCCCAAAACGGCCTTTTTGTAAGAATGGATGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SNLVAETSLFPTFSS*VLLPKRPFCKNGWS Trigger: GCTCCATCCATTCTTACAAAAAGGCCGTTTTGGGAGAAGCACCAATGAGGAGAACGTTGGGAACAAGGAGGTTTCCGCAACCAAGTTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS TCA 72 bp | GGATATGTCCCCAGCCAGACTGCACAGATGCACACTTaGATGATGGAACCACAGCAGACTATAGCATATGAA | + |
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Preference number: 6 (lower is better) Translates to: GYVPSQTAQMHT*MMEPQQTIAYE Trigger: TTCATATGCTATAGTCTGCTGTGGTTCCATCATTCAAGTGTGCATCTGTGCAGTCTGGCTGGGGACATATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS GCA 72 bp | GTGAGGTATTCATATCCCAAACATGCAGAGGTCGTGTaGTCAGGCTGCCATTTGGCTCACATTTACTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: VRYSYPKHAEVV*SGCHLAHIYLV Trigger: AACCAAGTAAATGTGAGCCAAATGGCAGCCTGAGCACACGACCTCTGCATGTTTGGGATATGAATACCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS GCA 72 bp | CGGAAACCTCCTTGTTCCCAACGTTCTCCTCATTGGTaGTTCTCCCAAAACGGCCTTTTTGTAAGAATGGAT | + |
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Preference number: 6 (lower is better) Translates to: RKPPCSQRSPHW*FSQNGLFVRMD Trigger: ATCCATTCTTACAAAAAGGCCGTTTTGGGAGAAGCACCAATGAGGAGAACGTTGGGAACAAGGAGGTTTCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 72 bp | TTGCGGAAACCTCCTTGTTCCCAACGTTCTCCTCATTaGTGCTTCTCCCAAAACGGCCTTTTTGTAAGAATG | + |
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Preference number: 6 (lower is better) Translates to: LRKPPCSQRSPH*CFSQNGLFVRM Trigger: CATTCTTACAAAAAGGCCGTTTTGGGAGAAGCACCAATGAGGAGAACGTTGGGAACAAGGAGGTTTCCGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CAA 72 bp | GTTGCGGAAACCTCCTTGTTCCCAACGTTCTCCTCATaGGTGCTTCTCCCAAAACGGCCTTTTTGTAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: VAETSLFPTFSS*VLLPKRPFCKN Trigger: ATTCTTACAAAAAGGCCGTTTTGGGAGAAGCACCAATGAGGAGAACGTTGGGAACAAGGAGGTTTCCGCAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 72 bp | TCGTGTGCTCAGGCTGCCATTTGGCTCACATTTACTTaGTTCCCTGACTTTCTGCCAATACAAATATGGACA | + |
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Preference number: 6 (lower is better) Translates to: SCAQAAIWLTFT*FPDFLPIQIWT Trigger: TGTCCATATTTGTATTGGCAGAAAGTCAGGGAACCAAGTAAATGTGAGCCAAATGGCAGCCTGAGCACACGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 72 bp | TGCTTGGCAGAGAATGGTAATTTAAGATGTCAAACTTaGTTGCGGAAACCTCCTTGTTCCCAACGTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CLAENGNLRCQT*LRKPPCSQRSP Trigger: AGGAGAACGTTGGGAACAAGGAGGTTTCCGCAACCAAGTTTGACATCTTAAATTACCATTCTCTGCCAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CAA 72 bp | GACTTAGAACTCGGGAGATCTGAGTTGATATTCCTGTaGAAATGCCTCCTATCACTGCAACCAGCTTATCAG | + |
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Preference number: 6 (lower is better) Translates to: DLELGRSELIFL*KCLLSLQPAYQ Trigger: CTGATAAGCTGGTTGCAGTGATAGGAGGCATTTCAACAGGAATATCAACTCAGATCTCCCGAGTTCTAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CAA 90 bp | TGTTGTAGAGACTTAGAACTCGGGAGATCTGAGTTGATATTCCTGTaGAAATGCCTCCTATCACTGCAACCAGCTTATCAGTCTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: CCRDLELGRSELIFL*KCLLSLQPAYQSSQ Trigger: CTGAGAAGACTGATAAGCTGGTTGCAGTGATAGGAGGCATTTCAACAGGAATATCAACTCAGATCTCCCGAGTTCTAAGTCTCTACAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 72 bp | TGGAAACAATTTCCACAGCTACCATGGTTTTGCCTTTaGAGCTCAGGTAAGTGGGTACAAAAGAAATCCACA | + |
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Preference number: 6 (lower is better) Translates to: WKQFPQLPWFCL*SSGKWVQKKST Trigger: TGTGGATTTCTTTTGTACCCACTTACCTGAGCTCCAAAGGCAAAACCATGGTAGCTGTGGAAATTGTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CAA 72 bp | GGATGTTGTAGAGACTTAGAACTCGGGAGATCTGAGTaGATATTCCTGTTGAAATGCCTCCTATCACTGCAA | + |
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Preference number: 6 (lower is better) Translates to: GCCRDLELGRSE*IFLLKCLLSLQ Trigger: TTGCAGTGATAGGAGGCATTTCAACAGGAATATCAACTCAGATCTCCCGAGTTCTAAGTCTCTACAACATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 72 bp | TCCATCTGCACATGGCAGACAATCAAAGCAACAAAATaGTTTCCCTTCAACAGGTGTTTTCCTATATCCAAG | + |
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Preference number: 6 (lower is better) Translates to: SICTWQTIKATK*FPFNRCFPISK Trigger: CTTGGATATAGGAAAACACCTGTTGAAGGGAAACCATTTTGTTGCTTTGATTGTCTGCCATGTGCAGATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CAA 90 bp | GGACCACACATCCTGGATAAAGATATCATGAGGGTATTTTCTAGGTaGAACATCTCTGAGAAAATCCTTGAATCCCGGTACTTGATCCAT | + |
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Preference number: 6 (lower is better) Translates to: GPHILDKDIMRVFSR*NISEKILESRYLIH Trigger: ATGGATCAAGTACCGGGATTCAAGGATTTTCTCAGAGATGTTCAACCTAGAAAATACCCTCATGATATCTTTATCCAGGATGTGTGGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS TCA 72 bp | TCAGGCTGCCATTTGGCTCACATTTACTTGGTTCCCTaGCTTTCTGCCAATACAAATATGGACATTCAAATA | + |
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Preference number: 6 (lower is better) Translates to: SGCHLAHIYLVP*LSANTNMDIQI Trigger: TATTTGAATGTCCATATTTGTATTGGCAGAAAGTCAGGGAACCAAGTAAATGTGAGCCAAATGGCAGCCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CAA 72 bp | CAAACTCGCCAACCTTTACTTGAGATTTGGTACTGCTaGGCAGAGAATGGTAATTTAAGATGTCAAACTTGG | + |
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Preference number: 6 (lower is better) Translates to: QTRQPLLEIWYC*AENGNLRCQTW Trigger: CCAAGTTTGACATCTTAAATTACCATTCTCTGCCAAGCAGTACCAAATCTCAAGTAAAGGTTGGCGAGTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CAA 90 bp | ATTCAAAGACAAACTCGCCAACCTTTACTTGAGATTTGGTACTGCTaGGCAGAGAATGGTAATTTAAGATGTCAAACTTGGTTGCGGAAA | + |
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Preference number: 6 (lower is better) Translates to: IQRQTRQPLLEIWYC*AENGNLRCQTWLRK Trigger: TTTCCGCAACCAAGTTTGACATCTTAAATTACCATTCTCTGCCAAGCAGTACCAAATCTCAAGTAAAGGTTGGCGAGTTTGTCTTTGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CAA 90 bp | ATTCTTCTGCTTATTTGGATACTGATCTTCAGGACACTTGATACATaGATCCATATCTGTTTCATTTGCAACCTCTCCATCTGCACATGG | + |
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Preference number: 6 (lower is better) Translates to: ILLLIWILIFRTLDT*IHICFICNLSICTW Trigger: CCATGTGCAGATGGAGAGGTTGCAAATGAAACAGATATGGATCAATGTATCAAGTGTCCTGAAGATCAGTATCCAAATAAGCAGAAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS GCA 72 bp | AGACAAACTCGCCAACCTTTACTTGAGATTTGGTACTaGTTGGCAGAGAATGGTAATTTAAGATGTCAAACT | + |
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Preference number: 6 (lower is better) Translates to: RQTRQPLLEIWY*LAENGNLRCQT Trigger: AGTTTGACATCTTAAATTACCATTCTCTGCCAAGCAGTACCAAATCTCAAGTAAAGGTTGGCGAGTTTGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS GCA 72 bp | TTGATCCATATCTGTTTCATTTGCAACCTCTCCATCTaGACATGGCAGACAATCAAAGCAACAAAATGGTTT | + |
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Preference number: 6 (lower is better) Translates to: LIHICFICNLSI*TWQTIKATKWF Trigger: AAACCATTTTGTTGCTTTGATTGTCTGCCATGTGCAGATGGAGAGGTTGCAAATGAAACAGATATGGATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 72 bp | ACGTTTCCTGTTTACTGTGTCTTTAGCAGGAAATTCTaGAACTTTTTCTGCAAATGCAACGCAAATTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: TFPVYCVFSRKF*NFFCKCNANSL Trigger: CAAGGAATTTGCGTTGCATTTGCAGAAAAAGTTCCAGAATTTCCTGCTAAAGACACAGTAAACAGGAAACGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CAA 72 bp | ATCCTGGATAAAGATATCATGAGGGTATTTTCTAGGTaGAACATCTCTGAGAAAATCCTTGAATCCCGGTAC | + |
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Preference number: 6 (lower is better) Translates to: ILDKDIMRVFSR*NISEKILESRY Trigger: GTACCGGGATTCAAGGATTTTCTCAGAGATGTTCAACCTAGAAAATACCCTCATGATATCTTTATCCAGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS TCA 72 bp | TCAACAGGTGTTTTCCTATATCCAAGTGGACAACTTTaGCTGCAAACAGAAAAAGGAATCTCCTTGTCATAT | + |
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Preference number: 6 (lower is better) Translates to: STGVFLYPSGQL*LQTEKGISLSY Trigger: ATATGACAAGGAGATTCCTTTTTCTGTTTGCAGTCAAAGTTGTCCACTTGGATATAGGAAAACACCTGTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS GCA 72 bp | TACTGTGTCTTTAGCAGGAAATTCTGGAACTTTTTCTaGAAATGCAACGCAAATTCCTTGGTTCTTTATCTC | + |
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Preference number: 6 (lower is better) Translates to: YCVFSRKFWNFF*KCNANSLVLYL Trigger: GAGATAAAGAACCAAGGAATTTGCGTTGCATTTGCAGAAAAAGTTCCAGAATTTCCTGCTAAAGACACAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS GCA 72 bp | CAGGTGTTTTCCTATATCCAAGTGGACAACTTTGACTaGAAACAGAAAAAGGAATCTCCTTGTCATATTTAC | + |
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Preference number: 6 (lower is better) Translates to: QVFSYIQVDNFD*KQKKESPCHIY Trigger: GTAAATATGACAAGGAGATTCCTTTTTCTGTTTGCAGTCAAAGTTGTCCACTTGGATATAGGAAAACACCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 72 bp | ATTCAAAGACAAACTCGCCAACCTTTACTTGAGATTTaGTACTGCTTGGCAGAGAATGGTAATTTAAGATGT | + |
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Preference number: 6 (lower is better) Translates to: IQRQTRQPLLEI*YCLAENGNLRC Trigger: ACATCTTAAATTACCATTCTCTGCCAAGCAGTACCAAATCTCAAGTAAAGGTTGGCGAGTTTGTCTTTGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CAA 72 bp | TTCAACAGGTGTTTTCCTATATCCAAGTGGACAACTTaGACTGCAAACAGAAAAAGGAATCTCCTTGTCATA | + |
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Preference number: 6 (lower is better) Translates to: FNRCFPISKWTT*TANRKRNLLVI Trigger: TATGACAAGGAGATTCCTTTTTCTGTTTGCAGTCAAAGTTGTCCACTTGGATATAGGAAAACACCTGTTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CAA 72 bp | CTTATTTGGATACTGATCTTCAGGACACTTGATACATaGATCCATATCTGTTTCATTTGCAACCTCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: LIWILIFRTLDT*IHICFICNLSI Trigger: GATGGAGAGGTTGCAAATGAAACAGATATGGATCAATGTATCAAGTGTCCTGAAGATCAGTATCCAAATAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS TCA 72 bp | TCTTCTGCTTATTTGGATACTGATCTTCAGGACACTTaGTACATTGATCCATATCTGTTTCATTTGCAACCT | + |
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Preference number: 6 (lower is better) Translates to: SSAYLDTDLQDT*YIDPYLFHLQP Trigger: AGGTTGCAAATGAAACAGATATGGATCAATGTATCAAGTGTCCTGAAGATCAGTATCCAAATAAGCAGAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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| CDS CCA 72 bp | TGTAATTTTAGGGAGACAGTAATTCTTCTGCTTATTTaGATACTGATCTTCAGGACACTTGATACATTGATC | + |
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Preference number: 6 (lower is better) Translates to: CNFRETVILLLI*ILIFRTLDTLI Trigger: GATCAATGTATCAAGTGTCCTGAAGATCAGTATCCAAATAAGCAGAAGAATTACTGTCTCCCTAAAATTACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073948.7 |
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