Pregenerated sensors for VMN2R14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091059Ensembl transcript IDs: ENSMUST00000170341.3, ENSMUST00000233137.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCCTTATGAGGCTATGCCAGTGCCTGGCAAATACAGAAGTGGATaGTCACAGTCATCTATTTGTTGGAACACAGGGCCCCTAATGAAG | + |
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Preference number: 1 (lower is better) Translates to: LPYEAMPVPGKYRSG*SQSSICWNTGPLMK Trigger: CTTCATTAGGGGCCCTGTGTTCCAACAAATAGATGACTGTGAGCATCCACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATAAGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR CCA 90 bp | ACCCATGTAAGGAGTTACAGAGACAAAGTTAAGTTAAAGCTGAGATaGAAGGAAGGACCATCCAGAAACTCTCCCATCCGGGGATCCATC | + |
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Preference number: 1 (lower is better) Translates to: THVRSYRDKVKLKLR*KEGPSRNSPIRGSI Trigger: GATGGATCCCCGGATGGGAGAGTTTCTGGATGGTCCTTCCTTCCATCTCAGCTTTAACTTAACTTTGTCTCTGTAACTCCTTACATGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR TCA 90 bp | GGAGAGGAATTGCTGGATCTTCTGCTAGTACTATGTCTAATTTTCTaGGGAACTGCCAGACTGATTTCCAGAGTGGTTGTACCAACTTGC | + |
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Preference number: 1 (lower is better) Translates to: GEELLDLLLVLCLIF*GTARLISRVVVPTC Trigger: GCAAGTTGGTACAACCACTCTGGAAATCAGTCTGGCAGTTCCTCAGAAAATTAGACATAGTACTAGCAGAAGATCCAGCAATTCCTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR GCA 90 bp | CACTGTGCATGGCAGCATGGAAGGAAGAAAGCTTGCAAAGCTTCTTaGCTACACAACTATTTACAGGAAACTTTAAATCTTGGAATGGAG | + |
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Preference number: 1 (lower is better) Translates to: HCAWQHGRKKACKAS*LHNYLQETLNLGME Trigger: CTCCATTCCAAGATTTAAAGTTTCCTGTAAATAGTTGTGTAGGCAAGAAGCTTTGCAAGCTTTCTTCCTTCCATGCTGCCATGCACAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR GCA 90 bp | GAAAGATTACTGCACTGTGCATGGCAGCATGGAAGGAAGAAAGCTTaGAAAGCTTCTTGCCTACACAACTATTTACAGGAAACTTTAAAT | + |
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Preference number: 1 (lower is better) Translates to: ERLLHCAWQHGRKKA*KASCLHNYLQETLN Trigger: ATTTAAAGTTTCCTGTAAATAGTTGTGTAGGCAAGAAGCTTTGCAAGCTTTCTTCCTTCCATGCTGCCATGCACAGTGCAGTAATCTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR CCA 90 bp | CAAAGCTTCTTGCCTACACAACTATTTACAGGAAACTTTAAATCTTaGAATGGAGGAGTTTGTCATAGGCAGGGAAGGGAACAAATATTG | + |
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Preference number: 1 (lower is better) Translates to: QSFLPTQLFTGNFKS*NGGVCHRQGREQIL Trigger: CAATATTTGTTCCCTTCCCTGCCTATGACAAACTCCTCCATTCCAAGATTTAAAGTTTCCTGTAAATAGTTGTGTAGGCAAGAAGCTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCTGAGATGGAAGGAAGGACCATCCAGAAACTCTCCCATCCGGGGATCCATCCCTAGTACAGGGGAATaGCAGGGCAAGGAAGCGGGA | + |
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Preference number: 2 (lower is better) Translates to: KLRWKEGPSRNSPIRGSIPSTGE*QGKEAG Trigger: TCCCGCTTCCTTGCCCTGGCATTCCCCTGTACTAGG...GATGGATCCCCGGATGGGAGAGTTTCTGGATGGTCCTTCCTTCCATCTCAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR CCA 90 bp | ACTAAAGTGTGGATACATCATTCCATCTTAGAATGGGGAACAAAATACCCATGTGGAAGCGGGAGTGGGTaGGTTGGGGAGATGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: TKVWIHHSILEWGTKYPCGSGSG*VGEMVG Trigger: CCCCACCATCTCCCCAACCCACCCACTCCCGCTTCC...ACATGGGTATTTTGTTCCCCATTCTAAGATGGAATGATGTATCCACACTTTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAAATACAGAAGTGGATGCTCACAGTCATCTATTTGTTGGAACACAGGGCCCGAGAGAAAATGGCACTaGCCTTCAACAACTGATGTC | + |
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Preference number: 2 (lower is better) Translates to: GKYRSGCSQSSICWNTGPERKWH*PSTTDV Trigger: GACATCAGTTGTTGAAGGTCAGTGCCATTTTCTCTC...GGGCCCTGTGTTCCAACAAATAGATGACTGTGAGCATCCACTTCTGTATTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGCTAGAAAAAGTACCCAAGGAGCTAAAGGGGTCAGCCTTCTGTAAAGAAATTTTGGGAGAAAGATaGACCCTAGCAAGCCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: KELEKVPKELKGSAFCKEILGER*TLASLH Trigger: GTGCAGGCTTGCTAGGGTGCATCTTTCTCCCAAAAT...TTCTTTACAGAAGGCTGACCCCTTTAGCTCCTTGGGTACTTTTTCTAGCTCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGTGTGGATACATCATTCCATCTTAGAATGGGGAACAAAATACCCATGTAAGCCTAGTACAGGGGAATaGCAGGGCAAGGAAGCGGGA | + |
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Preference number: 2 (lower is better) Translates to: KVWIHHSILEWGTKYPCKPSTGE*QGKEAG Trigger: TCCCGCTTCCTTGCCCTGGCATTCCCCTGTACTAGG...CTTACATGGGTATTTTGTTCCCCATTCTAAGATGGAATGATGTATCCACACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR CCA 90 bp | GACCATCCAGAAACTCTCCCATCCGGGGATCCATCCTATATACAACTACCAAACCATTTTAGGAATGTATaGAGGGGCTACAAGTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: DHPETLPSGDPSYIQLPNHFRNV*RGYKWC Trigger: ACACCACTTGTAGCCCCTCCATACATTCCTAAAATG...GTTTGGTAGTTGTATATAGGATGGATCCCCGGATGGGAGAGTTTCTGGATGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR TCA 90 bp | GATGGTGGGATAGATCTTGTGAGTCAAAGAATGATGAAAGTGGCTGTGAACATAAGACAGGGAGGAAGGTaGTCCAGACACTGCAAAACA | + |
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Preference number: 2 (lower is better) Translates to: DGGIDLVSQRMMKVAVNIRQGGR*SRHCKT Trigger: TGTTTTGCAGTGTCTGGATCACCTTCCTCCCTGTCT...TATGTTCACAGCCACTTTCATCATTCTTTGACTCACAAGATCTATCCCACCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR TCA 90 bp | GACCATCCAGAAACTCTCCCATCCGGGGATCCATCCTATATACAACTACCAAACTACAAGTGGTGTTCTTaGGACAGGAAATATAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: DHPETLPSGDPSYIQLPNYKWCS*DRKYKD Trigger: GTCTTTATATTTCCTGTCTCAAGAACACCACTTGTA...GTTTGGTAGTTGTATATAGGATGGATCCCCGGATGGGAGAGTTTCTGGATGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR TCA 90 bp | GACCATCCAGAAACTCTCCCATCCGGGGATCCATCCTATATACAACTACCAAACGAAGGAACAACAATATaGACTAAACACTACCCCTTA | + |
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Preference number: 2 (lower is better) Translates to: DHPETLPSGDPSYIQLPNEGTTI*TKHYPL Trigger: TAAGGGGTAGTGTTTAGTTCATATTGTTGTTCCTTC...GTTTGGTAGTTGTATATAGGATGGATCCCCGGATGGGAGAGTTTCTGGATGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCCCAGGAGAGGAATTGCTGGATCTTCTGCTAGTACTATGTCTAATTTTCTGCTGAAGAAAGATTACTaGACTGTGCATGGCAGCATG | + |
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Preference number: 2 (lower is better) Translates to: MPRRGIAGSSASTMSNFLLKKDY*TVHGSM Trigger: CATGCTGCCATGCACAGTGCAGTAATCTTTCTTCAG...CAGAAAATTAGACATAGTACTAGCAGAAGATCCAGCAATTCCTCTCCTGGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR GCA 90 bp | GATCTGAAGAAAGATTACTGCACTGTGCATGGCAGCATGGAAGGAAGAAAGCTTCTCCCTTTGTACTTCTaGAGAAAGGTTGAATCTGGT | + |
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Preference number: 2 (lower is better) Translates to: DLKKDYCTVHGSMEGRKLLPLYF*RKVESG Trigger: ACCAGATTCAACCTTTCTGCAGAAGTACAAAGGGAG...AAGCTTTCTTCCTTCCATGCTGCCATGCACAGTGCAGTAATCTTTCTTCAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233137.2 |
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| 3UTR CAA 90 bp | GCACTGTGCATGGCAGCATGGAAGGAAGAAAGCTTGCAAAGCTTCTaGCCTACACAACTATTTACAGGAAACTTTAAATCTTGGAATGGA | + |
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Preference number: 2 (lower is better) Translates to: ALCMAAWKEESLQSF*PTQLFTGNFKSWNG Trigger: TCCATTCCAAGATTTAAAGTTTCCTGTAAATAGTTGTGTAGGCAAGAAGCTTTGCAAGCTTTCTTCCTTCCATGCTGCCATGCACAGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR TCA 90 bp | AATACCCATGTAAGGAGTTACAGAGACAAAGTTAAGTTAAAGCTGAGATGGAAGAGACAGGGAGGAAGGTaGTCCAGACACTGCAAAACA | + |
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Preference number: 2 (lower is better) Translates to: NTHVRSYRDKVKLKLRWKRQGGR*SRHCKT Trigger: TGTTTTGCAGTGTCTGGATCACCTTCCTCCCTGTCT...CTTCCATCTCAGCTTTAACTTAACTTTGTCTCTGTAACTCCTTACATGGGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR GCA 90 bp | GACCATCCAGAAACTCTCCCATCCGGGGATCCATCCTATATACAACTACCAAACAAATACAGAAGTGGATaGTCACAGTCATCTATTTGT | + |
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Preference number: 2 (lower is better) Translates to: DHPETLPSGDPSYIQLPNKYRSG*SQSSIC Trigger: ACAAATAGATGACTGTGAGCATCCACTTCTGTATTT...GTTTGGTAGTTGTATATAGGATGGATCCCCGGATGGGAGAGTTTCTGGATGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCCCAGGAGAGGAATTGCTGGATCTTCTGCTAGTACTATGTCTAATTTTCTGCATTTTAGGAATGTATaGAGGGGCTACAAGTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: MPRRGIAGSSASTMSNFLHFRNV*RGYKWC Trigger: ACACCACTTGTAGCCCCTCCATACATTCCTAAAATG...CAGAAAATTAGACATAGTACTAGCAGAAGATCCAGCAATTCCTCTCCTGGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR CCA 90 bp | GACCATCCAGAAACTCTCCCATCCGGGGATCCATCCTATATACAACTACCAAACGGAAACTTTAAATCTTaGAATGGAGGAGTTTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: DHPETLPSGDPSYIQLPNGNFKS*NGGVCH Trigger: ATGACAAACTCCTCCATTCCAAGATTTAAAGTTTCC...GTTTGGTAGTTGTATATAGGATGGATCCCCGGATGGGAGAGTTTCTGGATGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAACTCTCCCATCCGGGGATCCATCCTATATACAACTACCAAACCTAGTCACGGAAACTTTAAATCTTaGAATGGAGGAGTTTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: RNSPIRGSILYTTTKPSHGNFKS*NGGVCH Trigger: ATGACAAACTCCTCCATTCCAAGATTTAAAGTTTCC...GTGACTAGGTTTGGTAGTTGTATATAGGATGGATCCCCGGATGGGAGAGTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR CCA 90 bp | AATACCCATGTAAGGAGTTACAGAGACAAAGTTAAGTTAAAGCTGAGATGGAAGCTGTGCATGGCAGCATaGAAGGAAGAAAGCTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: NTHVRSYRDKVKLKLRWKLCMAA*KEESLQ Trigger: TTGCAAGCTTTCTTCCTTCCATGCTGCCATGCACAG...CTTCCATCTCAGCTTTAACTTAACTTTGTCTCTGTAACTCCTTACATGGGTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGGCTCAGGAAAATGTACAGAAGATGGTGGGATAGATCTTGTGAGTCAAAGAATTAATGCTGATTACTaGCTTCATATCTGTGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: QGSGKCTEDGGIDLVSQRINADY*LHICAL Trigger: GAGAGCACAGATATGAAGTCAGTAATCAGCATTAAT...TCTTTGACTCACAAGATCTATCCCACCATCTTCTGTACATTTTCCTGAGCCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170341.3 |
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| 3UTR-3UTR GCA 90 bp | CAACTACCAAACCTAGTCACTATTGCATATACCAGAAAGATTTTACTGACAGAAATTTTGGGAGAAAGATaGACCCTAGCAAGCCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: QLPNLVTIAYTRKILLTEILGER*TLASLH Trigger: GTGCAGGCTTGCTAGGGTGCATCTTTCTCCCAAAAT...TTCTGTCAGTAAAATCTTTCTGGTATATGCAATAGTGACTAGGTTTGGTAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCCCAGGAGAGGAATTGCTGGATCTTCTGCTAGTACTATGTCTAATTTTCTGAGACAAGAACTTGGATaGAGACATTCAATGAGAACA | + |
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Preference number: 2 (lower is better) Translates to: MPRRGIAGSSASTMSNFLRQELG*RHSMRT Trigger: TGTTCTCATTGAATGTCTGCATCCAAGTTCTTGTCT...CAGAAAATTAGACATAGTACTAGCAGAAGATCCAGCAATTCCTCTCCTGGGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170341.3 |
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| 3UTR-3UTR GCA 90 bp | AAAGTGTGGATACATCATTCCATCTTAGAATGGGGAACAAAATACCCATGTAAGGGAAGGAAGAAAGCTTaGAAAGCTTCTTGCCTACAC | + |
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Preference number: 2 (lower is better) Translates to: KVWIHHSILEWGTKYPCKGRKKA*KASCLH Trigger: GTGTAGGCAAGAAGCTTTGCAAGCTTTCTTCCTTCC...CTTACATGGGTATTTTGTTCCCCATTCTAAGATGGAATGATGTATCCACACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR GCA 90 bp | ATGAATTTCTTAGGCAAATGGATGTATCTGGAGGATATCATTCTGAGTGAGGTAGGAAGGAAGAAAGCTTaGAAAGCTTCTTGCCTACAC | + |
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Preference number: 2 (lower is better) Translates to: MNFLGKWMYLEDIILSEVGRKKA*KASCLH Trigger: GTGTAGGCAAGAAGCTTTGCAAGCTTTCTTCCTTCC...TACCTCACTCAGAATGATATCCTCCAGATACATCCATTTGCCTAAGAAATTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR CCA 90 bp | ACTAAAGTGTGGATACATCATTCCATCTTAGAATGGGGAACAAAATACCCATGTTTACTGCACTGTGCATaGCAGCATGGAAGGAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: TKVWIHHSILEWGTKYPCLLHCA*QHGRKK Trigger: TTTCTTCCTTCCATGCTGCCATGCACAGTGCAGTAA...ACATGGGTATTTTGTTCCCCATTCTAAGATGGAATGATGTATCCACACTTTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR CCA 90 bp | AATACCCATGTAAGGAGTTACAGAGACAAAGTTAAGTTAAAGCTGAGATGGAAGTTACTGCACTGTGCATaGCAGCATGGAAGGAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: NTHVRSYRDKVKLKLRWKLLHCA*QHGRKK Trigger: TTTCTTCCTTCCATGCTGCCATGCACAGTGCAGTAA...CTTCCATCTCAGCTTTAACTTAACTTTGTCTCTGTAACTCCTTACATGGGTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR TCA 90 bp | CAACTACCAAACCTAGTCACTATTGCATATACCAGAAAGATTTTACTGACAGAAGAGAGAAAATGGCACTaGCCTTCAACAACTGATGTC | + |
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Preference number: 2 (lower is better) Translates to: QLPNLVTIAYTRKILLTEERKWH*PSTTDV Trigger: GACATCAGTTGTTGAAGGTCAGTGCCATTTTCTCTC...TTCTGTCAGTAAAATCTTTCTGGTATATGCAATAGTGACTAGGTTTGGTAGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR TCA 90 bp | GATGGTGGGATAGATCTTGTGAGTCAAAGAATGATGAAAGTGGCTGTGAACATAAGCATAGGTAGACCATaGAGTTTTACCAATATGATG | + |
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Preference number: 2 (lower is better) Translates to: DGGIDLVSQRMMKVAVNISIGRP*SFTNMM Trigger: CATCATATTGGTAAAACTTCATGGTCTACCTATGCT...TATGTTCACAGCCACTTTCATCATTCTTTGACTCACAAGATCTATCCCACCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR GCA 90 bp | GATGGTGGGATAGATCTTGTGAGTCAAAGAATGATGAAAGTGGCTGTGAACATAGAGAGTCATCCAGAGTaGTTTATATATTCACAGATT | + |
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Preference number: 2 (lower is better) Translates to: DGGIDLVSQRMMKVAVNIESHPE*FIYSQI Trigger: AATCTGTGAATATATAAAGCACTCTGGATGACTCTC...TATGTTCACAGCCACTTTCATCATTCTTTGACTCACAAGATCTATCCCACCATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAATTTCTTAGGCAAATGGATGTATCTGGAGGATATCATTCTGAGTGAGGTATACAAGTGGTGTTCTTaGGACAGGAAATATAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: MNFLGKWMYLEDIILSEVYKWCS*DRKYKD Trigger: GTCTTTATATTTCCTGTCTCAAGAACACCACTTGTA...TACCTCACTCAGAATGATATCCTCCAGATACATCCATTTGCCTAAGAAATTCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR TCA 90 bp | CAACTACCAAACCTAGTCACTATTGCATATACCAGAAAGATTTTACTGACAGAATACCATTTTTCTCCCTaGGTGAAACACATTCATTTC | + |
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Preference number: 2 (lower is better) Translates to: QLPNLVTIAYTRKILLTEYHFSP*VKHIHF Trigger: GAAATGAATGTGTTTCACTCAGGGAGAAAAATGGTA...TTCTGTCAGTAAAATCTTTCTGGTATATGCAATAGTGACTAGGTTTGGTAGTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170341.3 |
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| 3UTR-3UTR TCA 90 bp | ACACAACTATTTACAGGAAACTTTAAATCTTGGAATGGAGGAGTTTGTCATAGGCTGACCTTCAACAACTaGTGTCCAGAAATAATAATG | + |
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Preference number: 2 (lower is better) Translates to: TQLFTGNFKSWNGGVCHRLTFNN*CPEIIM Trigger: CATTATTATTTCTGGACATCAGTTGTTGAAGGTCAG...CCTATGACAAACTCCTCCATTCCAAGATTTAAAGTTTCCTGTAAATAGTTGTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGTGTGGATACATCATTCCATCTTAGAATGGGGAACAAAATACCCATGTAAGGAGAGTCATCCAGAGTaGTTTATATATTCACAGATT | + |
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Preference number: 2 (lower is better) Translates to: KVWIHHSILEWGTKYPCKESHPE*FIYSQI Trigger: AATCTGTGAATATATAAAGCACTCTGGATGACTCTC...CTTACATGGGTATTTTGTTCCCCATTCTAAGATGGAATGATGTATCCACACTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR GCA 72 bp | GGTCTTGCGAAAATCATATGTCCTAGTACAGGGGAATaGCAGGGCAAGGAAGCGGGAGTGGGTGGGTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: GLAKIICPSTGE*QGKEAGVGGLG Trigger: CCCCAACCCACCCACTCCCGCTTCCTTGCCCTGGCATTCCCCTGTACTAGGACATATGATTTTCGCAAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR CAA 90 bp | AAGCTGAGATGGAAGGAAGGACCATCCAGAAACTCTCCCATCCGGGGATCCATCTGGAAGGAAGAAAGCTaGCAAAGCTTCTTGCCTACA | + |
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Preference number: 3 (lower is better) Translates to: KLRWKEGPSRNSPIRGSIWKEES*QSFLPT Trigger: TGTAGGCAAGAAGCTTTGCAAGCTTTCTTCCTTCCA...GATGGATCCCCGGATGGGAGAGTTTCTGGATGGTCCTTCCTTCCATCTCAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR CAA 90 bp | AAGCTGAGATGGAAGGAAGGACCATCCAGAAACTCTCCCATCCGGGGATCCATCGTTAGGAATTTGGCATaGTCCACAAGAAGGAGAATC | + |
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Preference number: 3 (lower is better) Translates to: KLRWKEGPSRNSPIRGSIVRNLA*STRRRI Trigger: GATTCTCCTTCTTGTGGACAATGCCAAATTCCTAAC...GATGGATCCCCGGATGGGAGAGTTTCTGGATGGTCCTTCCTTCCATCTCAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR-3UTR CAA 90 bp | GACCATCCAGAAACTCTCCCATCCGGGGATCCATCCTATATACAACTACCAAACCACCTACAGAGTATTTaGTCCAGAGGTAGCATTCTC | + |
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Preference number: 3 (lower is better) Translates to: DHPETLPSGDPSYIQLPNHLQSI*SRGSIL Trigger: GAGAATGCTACCTCTGGACAAAATACTCTGTAGGTG...GTTTGGTAGTTGTATATAGGATGGATCCCCGGATGGGAGAGTTTCTGGATGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170341.3 |
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| 3UTR CCA 72 bp | ACATATGTAGCAGAGGATGTCCTAGTTGGCCATCAATaGGAGGAGAGGCCCTTGGTCTTGCGAAAATCATAT | + |
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Preference number: 3 (lower is better) Translates to: TYVAEDVLVGHQ*EERPLVLRKSY Trigger: ATATGATTTTCGCAAGACCAAGGGCCTCTCCTCCCATTGATGGCCAACTAGGACATCCTCTGCTACATATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| 3UTR CCA 72 bp | GGACCATGTGTCCTTATTACAAGTTGGAATATCATCTaGGTATATGCCCAGGAGAGGAATTGCTGGATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GPCVLITSWNII*VYAQERNCWIF Trigger: GAAGATCCAGCAATTCCTCTCCTGGGCATATACCCAGATGATATTCCAACTTGTAATAAGGACACATGGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAGCTAGAAAAAGTACCCAAGGAGCTAAAGGGGTCAGCCTTCTGTAAAGAAGTTAGGAATTTGGCATaGTCCACAAGAAGGAGAATC | + |
|
Preference number: 3 (lower is better) Translates to: KELEKVPKELKGSAFCKEVRNLA*STRRRI Trigger: GATTCTCCTTCTTGTGGACAATGCCAAATTCCTAAC...TTCTTTACAGAAGGCTGACCCCTTTAGCTCCTTGGGTACTTTTTCTAGCTCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR-3UTR CAA 90 bp | GATCTGAAGAAAGATTACTGCACTGTGCATGGCAGCATGGAAGGAAGAAAGCTTCTGAATGTTAGGAATTaGGCATTGTCCACAAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: DLKKDYCTVHGSMEGRKLLNVRN*ALSTRR Trigger: CCTTCTTGTGGACAATGCCAAATTCCTAACATTCAG...AAGCTTTCTTCCTTCCATGCTGCCATGCACAGTGCAGTAATCTTTCTTCAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAACTCTCCCATCCGGGGATCCATCCTATATACAACTACCAAACCTAGTCACGCTACAAACAATACTTaGAGAGAAAATGGCACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: RNSPIRGSILYTTTKPSHATNNT*RENGTD Trigger: GTCAGTGCCATTTTCTCTCAAAGTATTGTTTGTAGC...GTGACTAGGTTTGGTAGTTGTATATAGGATGGATCCCCGGATGGGAGAGTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGTTGGAACACAGGGCCCCTAATGAAGGAGCTAGAAAAAGTACCCAAGGAGAGCTTGCAAAGCTTCTaGCCTACACAACTATTTACA | + |
|
Preference number: 3 (lower is better) Translates to: ICWNTGPLMKELEKVPKESLQSF*PTQLFT Trigger: TGTAAATAGTTGTGTAGGCAAGAAGCTTTGCAAGCT...CTCCTTGGGTACTTTTTCTAGCTCCTTCATTAGGGGCCCTGTGTTCCAACAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR GCA 72 bp | ACTGCCAGACTGATTTCCAGAGTGGTTGTACCAACTTaGAATCCAAATAACAATGGAGGACTGTCTCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TARLISRVVVPT*NPNNNGGLSLF Trigger: AAAGAGAGACAGTCCTCCATTGTTATTTGGATTGCAAGTTGGTACAACCACTCTGGAAATCAGTCTGGCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR TCA 72 bp | TTGCTGGATCTTCTGCTAGTACTATGTCTAATTTTCTaGGGAACTGCCAGACTGATTTCCAGAGTGGTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LLDLLLVLCLIF*GTARLISRVVV Trigger: TACAACCACTCTGGAAATCAGTCTGGCAGTTCCTCAGAAAATTAGACATAGTACTAGCAGAAGATCCAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR GCA 72 bp | TCTTCTGCTAGTACTATGTCTAATTTTCTGAGGAACTaGCAGACTGATTTCCAGAGTGGTTGTACCAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: SSASTMSNFLRN*QTDFQSGCTNL Trigger: CAAGTTGGTACAACCACTCTGGAAATCAGTCTGGCAGTTCCTCAGAAAATTAGACATAGTACTAGCAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR CCA 72 bp | CCTCATCCAAGGCTCAGGAAAATGTACAGAAGATGGTaGGATAGATCTTGTGAGTCAAAGAATGATGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: PHPRLRKMYRRW*DRSCESKNDES Trigger: ACTTTCATCATTCTTTGACTCACAAGATCTATCCCACCATCTTCTGTACATTTTCCTGAGCCTTGGATGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR CCA 72 bp | TTCCCTCATCCAAGGCTCAGGAAAATGTACAGAAGATaGTGGGATAGATCTTGTGAGTCAAAGAATGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: FPHPRLRKMYRR*WDRSCESKNDE Trigger: TTCATCATTCTTTGACTCACAAGATCTATCCCACCATCTTCTGTACATTTTCCTGAGCCTTGGATGAGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR CCA 72 bp | TATGGTCATAGTGGACCATGTGTCCTTATTACAAGTTaGAATATCATCTGGGTATATGCCCAGGAGAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: YGHSGPCVLITS*NIIWVYAQERN Trigger: ATTCCTCTCCTGGGCATATACCCAGATGATATTCCAACTTGTAATAAGGACACATGGTCCACTATGACCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR-3UTR CAA 90 bp | GATGGTGGGATAGATCTTGTGAGTCAAAGAATGATGAAAGTGGCTGTGAACATACTGAATGTTAGGAATTaGGCATTGTCCACAAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: DGGIDLVSQRMMKVAVNILNVRN*ALSTRR Trigger: CCTTCTTGTGGACAATGCCAAATTCCTAACATTCAG...TATGTTCACAGCCACTTTCATCATTCTTTGACTCACAAGATCTATCCCACCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR CCA 72 bp | TTGCCTACACAACTATTTACAGGAAACTTTAAATCTTaGAATGGAGGAGTTTGTCATAGGCAGGGAAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LPTQLFTGNFKS*NGGVCHRQGRE Trigger: TTCCCTTCCCTGCCTATGACAAACTCCTCCATTCCAAGATTTAAAGTTTCCTGTAAATAGTTGTGTAGGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAGGGAACAAATATTGGCAAGCTAGTACAAAATAATGAACCATCAGAATGTGCTACAAACAATACTTaGAGAGAAAATGGCACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: GKGTNIGKLVQNNEPSECATNNT*RENGTD Trigger: GTCAGTGCCATTTTCTCTCAAAGTATTGTTTGTAGC...ACATTCTGATGGTTCATTATTTTGTACTAGCTTGCCAATATTTGTTCCCTTCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR GCA 72 bp | TCCATCCTATATACAACTACCAAACCTAGTCACTATTaGATATACCAGAAAGATTTTACTGACAGAACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SILYTTTKPSHY*IYQKDFTDRTL Trigger: CAGGGTTCTGTCAGTAAAATCTTTCTGGTATATGCAATAGTGACTAGGTTTGGTAGTTGTATATAGGATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR-3UTR CAA 90 bp | CAACTACCAAACCTAGTCACTATTGCATATACCAGAAAGATTTTACTGACAGAAAGCTTGCAAAGCTTCTaGCCTACACAACTATTTACA | + |
|
Preference number: 3 (lower is better) Translates to: QLPNLVTIAYTRKILLTESLQSF*PTQLFT Trigger: TGTAAATAGTTGTGTAGGCAAGAAGCTTTGCAAGCT...TTCTGTCAGTAAAATCTTTCTGGTATATGCAATAGTGACTAGGTTTGGTAGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR TCA 72 bp | ACATTCAATGAGAACACATGGATTAATGCTGATTACTaGCTTCATATCTGTGCTCTCTATAGTCCTCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TFNENTWINADY*LHICALYSPLS Trigger: AGAAAGAGGACTATAGAGAGCACAGATATGAAGTCAGTAATCAGCATTAATCCATGTGTTCTCATTGAATGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170341.3 |
||
| 3UTR GCA 72 bp | TTGGTTAATAGAATGATTTCGAGACAAGAACTTGGATaGAGACATTCAATGAGAACACATGGATTAATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVNRMISRQELG*RHSMRTHGLML Trigger: CAGCATTAATCCATGTGTTCTCATTGAATGTCTGCATCCAAGTTCTTGTCTCGAAATCATTCTATTAACCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170341.3 |
||
| 3UTR CCA 72 bp | AAAACTAAAGTGTGGATACATCATTCCATCTTAGAATaGGGAACAAAATACCCATGTAAGGAGTTACAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KTKVWIHHSILE*GTKYPCKELQR Trigger: TCTCTGTAACTCCTTACATGGGTATTTTGTTCCCCATTCTAAGATGGAATGATGTATCCACACTTTAGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR TCA 72 bp | GTCATCCAGAGTGCTTTATATATTCACAGATTTCTCTaGCCTCATTGTGATATAGGTTTTGTGTGTGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: VIQSALYIHRFL*PHCDIGFVCEF Trigger: AAATTCACACACAAAACCTATATCACAATGAGGTCAGAGAAATCTGTGAATATATAAAGCACTCTGGATGAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CCA 90 bp | GGCAAATACAGAAGTGGATGCTCACAGTCATCTATTTGTTGGAACACAGGGCCCGCTGCAGGATGCAGGTaGCCTTGTTGGGATGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GKYRSGCSQSSICWNTGPAAGCR*PCWDVQ Trigger: TTGGACATCCCAACAAGGCCACCTGCATCCTGCAGC...GGGCCCTGTGTTCCAACAAATAGATGACTGTGAGCATCCACTTCTGTATTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR CAA 72 bp | GATGTCCTAGTTGGCCATCAATGGGAGGAGAGGCCCTaGGTCTTGCGAAAATCATATGTCCTAGTACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DVLVGHQWEERP*VLRKSYVLVQG Trigger: CCCCTGTACTAGGACATATGATTTTCGCAAGACCAAGGGCCTCTCCTCCCATTGATGGCCAACTAGGACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTGAGATGGAAGGAAGGACCATCCAGAAACTCTCCCATCCGGGGATCCATCACAAATGTGTGTCCTTaGTGGCTACCTGATGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: KLRWKEGPSRNSPIRGSITNVCP*WLPDGH Trigger: ATGTCCATCAGGTAGCCACCAAGGACACACATTTGT...GATGGATCCCCGGATGGGAGAGTTTCTGGATGGTCCTTCCTTCCATCTCAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR TCA 90 bp | AGAAACTCTCCCATCCGGGGATCCATCCTATATACAACTACCAAACCTAGTCACCCTGCTGACAGTCAGTaGATGTTCCTTTGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RNSPIRGSILYTTTKPSHPADSQ*MFLWVL Trigger: AAGAACCCAAAGGAACATTCACTGACTGTCAGCAGG...GTGACTAGGTTTGGTAGTTGTATATAGGATGGATCCCCGGATGGGAGAGTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR CAA 72 bp | ACTGCACTGTGCATGGCAGCATGGAAGGAAGAAAGCTaGCAAAGCTTCTTGCCTACACAACTATTTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TALCMAAWKEES*QSFLPTQLFTG Trigger: TCCTGTAAATAGTTGTGTAGGCAAGAAGCTTTGCAAGCTTTCTTCCTTCCATGCTGCCATGCACAGTGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR TCA 90 bp | AAGGAGCTAGAAAAAGTACCCAAGGAGCTAAAGGGGTCAGCCTTCTGTAAAGAATCAAATGGCACCAGATaGGAGAAAACTTCAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KELEKVPKELKGSAFCKESNGTR*EKTSGA Trigger: TGCTCCTGAAGTTTTCTCTCATCTGGTGCCATTTGA...TTCTTTACAGAAGGCTGACCCCTTTAGCTCCTTGGGTACTTTTTCTAGCTCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR TCA 90 bp | GGCAAATACAGAAGTGGATGCTCACAGTCATCTATTTGTTGGAACACAGGGCCCGGTTCTTCTGTTTGCTaGGATTCTACTTGTAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GKYRSGCSQSSICWNTGPGSSVC*DSTCRR Trigger: TCTTCTACAAGTAGAATCTCAGCAAACAGAAGAACC...GGGCCCTGTGTTCCAACAAATAGATGACTGTGAGCATCCACTTCTGTATTTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR GCA 90 bp | GACCATCCAGAAACTCTCCCATCCGGGGATCCATCCTATATACAACTACCAAACACACTGTTCCATATCTaGTGTTTCATTGGAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: DHPETLPSGDPSYIQLPNTLFHI*CFIGNC Trigger: GCAGTTTCCAATGAAACAGCAGATATGGAACAGTGT...GTTTGGTAGTTGTATATAGGATGGATCCCCGGATGGGAGAGTTTCTGGATGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR GCA 90 bp | GTTGAATCTGGTCTAAGTAAAATAACACAACATTTTGGGAGAAAGATGCACCCTTGGTCTGCTGCAGGATaGAGGTGGCCTTGTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VESGLSKITQHFGRKMHPWSAAG*RWPCWD Trigger: ATCCCAACAAGGCCACCTGCATCCTGCAGCAGACCA...AGGGTGCATCTTTCTCCCAAAATGTTGTGTTATTTTACTTAGACCAGATTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CCA 90 bp | GACCATCCAGAAACTCTCCCATCCGGGGATCCATCCTATATACAACTACCAAACTATCTGCTGTTTCATTaGAAACTGCATTTTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DHPETLPSGDPSYIQLPNYLLFH*KLHFLG Trigger: GCCCAGAAAATGCAGTTTCCAATGAAACAGCAGATA...GTTTGGTAGTTGTATATAGGATGGATCCCCGGATGGGAGAGTTTCTGGATGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CCA 90 bp | TGGGATAGATCTTGTGAGTCAAAGAATGATGAAAGTGGCTGTGAACATAAATCTGCTGCAGGATGCAGGTaGCCTTGTTGGGATGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WDRSCESKNDESGCEHKSAAGCR*PCWDVQ Trigger: TTGGACATCCCAACAAGGCCACCTGCATCCTGCAGC...AGATTTATGTTCACAGCCACTTTCATCATTCTTTGACTCACAAGATCTATCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR TCA 90 bp | CAAGGCTCAGGAAAATGTACAGAAGATGGTGGGATAGATCTTGTGAGTCAAAGATCAAATGGCACCAGATaGGAGAAAACTTCAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGSGKCTEDGGIDLVSQRSNGTR*EKTSGA Trigger: TGCTCCTGAAGTTTTCTCTCATCTGGTGCCATTTGA...TCTTTGACTCACAAGATCTATCCCACCATCTTCTGTACATTTTCCTGAGCCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR GCA 90 bp | GACCATCCAGAAACTCTCCCATCCGGGGATCCATCCTATATACAACTACCAAACCTTGTCATGTATAACTaGATGTCTTCTGGGATCATA | + |
|
Preference number: 4 (lower is better) Translates to: DHPETLPSGDPSYIQLPNLVMYN*MSSGII Trigger: TATGATCCCAGAAGACATGCAGTTATACATGACAAG...GTTTGGTAGTTGTATATAGGATGGATCCCCGGATGGGAGAGTTTCTGGATGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR GCA 90 bp | TGCAAAGCTTCTTGCCTACACAACTATTTACAGGAAACTTTAAATCTTGGAATGTGGTCTGCTGCAGGATaGAGGTGGCCTTGTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CKASCLHNYLQETLNLGMWSAAG*RWPCWD Trigger: ATCCCAACAAGGCCACCTGCATCCTGCAGCAGACCA...CATTCCAAGATTTAAAGTTTCCTGTAAATAGTTGTGTAGGCAAGAAGCTTTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CCA 90 bp | GATCTGAAGAAAGATTACTGCACTGTGCATGGCAGCATGGAAGGAAGAAAGCTTGCAATCTCACTGTGGTaGTATTCAAAAGTGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DLKKDYCTVHGSMEGRKLAISLW*YSKVTV Trigger: GACTGTCACTTTTGAATACCACCACAGTGAGATTGC...AAGCTTTCTTCCTTCCATGCTGCCATGCACAGTGCAGTAATCTTTCTTCAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR GCA 90 bp | GATCTGAAGAAAGATTACTGCACTGTGCATGGCAGCATGGAAGGAAGAAAGCTTACACTGTTCCATATCTaGTGTTTCATTGGAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: DLKKDYCTVHGSMEGRKLTLFHI*CFIGNC Trigger: GCAGTTTCCAATGAAACAGCAGATATGGAACAGTGT...AAGCTTTCTTCCTTCCATGCTGCCATGCACAGTGCAGTAATCTTTCTTCAGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR TCA 90 bp | GTGATGGCCATCAACAATATGCAACACTGTACTATGCTCCACACTCTACTAACATACAGATGTTTTCCATaGTGGTCCTATAAGGCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VMAINNMQHCTMLHTLLTYRCFP*WSYKAY Trigger: ATAGGCCTTATAGGACCATCATGGAAAACATCTGTA...TGTTAGTAGAGTGTGGAGCATAGTACAGTGTTGCATATTGTTGATGGCCATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170341.3 |
||
| CDS-3UTR TCA 90 bp | ATGCCCAGGAGAGGAATTGCTGGATCTTCTGCTAGTACTATGTCTAATTTTCTGGGTTCTTCTGTTTGCTaGGATTCTACTTGTAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: MPRRGIAGSSASTMSNFLGSSVC*DSTCRR Trigger: TCTTCTACAAGTAGAATCTCAGCAAACAGAAGAACC...CAGAAAATTAGACATAGTACTAGCAGAAGATCCAGCAATTCCTCTCCTGGGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CCA 90 bp | ATTGGCATTATATTAAGCAGTGCTGTGCTGCCCTACATTGTAAGTACTAACTGTTCCTCCAAAAGCAAATaGGTTCAGTCAAATGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: IGIILSSAVLPYIVSTNCSSKSK*VQSNGT Trigger: GGTGCCATTTGACTGAACCCATTTGCTTTTGGAGGA...ACAGTTAGTACTTACAATGTAGGGCAGCACAGCACTGCTTAATATAATGCCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170341.3 |
||
| CDS-3UTR CCA 90 bp | TGGGATAGATCTTGTGAGTCAAAGAATGATGAAAGTGGCTGTGAACATAAATCTTCCTGGATTTCAGTGTaGAAGACACCTGCTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: WDRSCESKNDESGCEHKSSWISV*KTPADS Trigger: ACTGTCAGCAGGTGTCTTCCACACTGAAATCCAGGA...AGATTTATGTTCACAGCCACTTTCATCATTCTTTGACTCACAAGATCTATCCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CCA 90 bp | GTTGAATCTGGTCTAAGTAAAATAACACAACATTTTGGGAGAAAGATGCACCCTTCCTGGATTTCAGTGTaGAAGACACCTGCTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VESGLSKITQHFGRKMHPSWISV*KTPADS Trigger: ACTGTCAGCAGGTGTCTTCCACACTGAAATCCAGGA...AGGGTGCATCTTTCTCCCAAAATGTTGTGTTATTTTACTTAGACCAGATTCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR TCA 90 bp | GTGATGGCCATCAACAATATGCAACACTGTACTATGCTCCACACTCTACTAACACAAGTCCATCTAAAATaGAGCATCAAAGTGATCATG | + |
|
Preference number: 4 (lower is better) Translates to: VMAINNMQHCTMLHTLLTQVHLK*SIKVIM Trigger: CATGATCACTTTGATGCTTCATTTTAGATGGACTTG...TGTTAGTAGAGTGTGGAGCATAGTACAGTGTTGCATATTGTTGATGGCCATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170341.3 |
||
| CDS-3UTR TCA 90 bp | CAACTACCAAACCTAGTCACTATTGCATATACCAGAAAGATTTTACTGACAGAACCTGCTGACAGTCAGTaGATGTTCCTTTGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLPNLVTIAYTRKILLTEPADSQ*MFLWVL Trigger: AAGAACCCAAAGGAACATTCACTGACTGTCAGCAGG...TTCTGTCAGTAAAATCTTTCTGGTATATGCAATAGTGACTAGGTTTGGTAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CCA 90 bp | ATGAATTTCTTAGGCAAATGGATGTATCTGGAGGATATCATTCTGAGTGAGGTAACAAATGTGTGTCCTTaGTGGCTACCTGATGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: MNFLGKWMYLEDIILSEVTNVCP*WLPDGH Trigger: ATGTCCATCAGGTAGCCACCAAGGACACACATTTGT...TACCTCACTCAGAATGATATCCTCCAGATACATCCATTTGCCTAAGAAATTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CCA 90 bp | TATAGTCCTCTTTCTTACACCTACAGAGTATTTTGTCCAGAGGTAGCATTCTCAAAAGTGATCATGCCATaGGACAAATGTGTGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YSPLSYTYRVFCPEVAFSKVIMP*DKCVSL Trigger: CAAGGACACACATTTGTCCCATGGCATGATCACTTT...TGAGAATGCTACCTCTGGACAAAATACTCTGTAGGTGTAAGAAAGAGGACTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170341.3 |
||
| CDS-3UTR CCA 90 bp | ATGCCCAGGAGAGGAATTGCTGGATCTTCTGCTAGTACTATGTCTAATTTTCTGTTAGCAATCTCACTGTaGTGGTATTCAAAAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: MPRRGIAGSSASTMSNFLLAISL*WYSKVT Trigger: TGTCACTTTTGAATACCACCACAGTGAGATTGCTAA...CAGAAAATTAGACATAGTACTAGCAGAAGATCCAGCAATTCCTCTCCTGGGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| 3UTR CAA 72 bp | ATTCGGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTaGATTTGCATTTCCATGATGATTAAGGATGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IRTGVRWNLRVV*ICISMMIKDVE Trigger: TTCAACATCCTTAATCATCATGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCCGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR GCA 90 bp | GTTGAATCTGGTCTAAGTAAAATAACACAACATTTTGGGAGAAAGATGCACCCTGCCATGTCAAAATTGTaGAGTGCTGTCCATTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VESGLSKITQHFGRKMHPAMSKL*SAVHSN Trigger: ATTGGAATGGACAGCACTGCACAATTTTGACATGGC...AGGGTGCATCTTTCTCCCAAAATGTTGTGTTATTTTACTTAGACCAGATTCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CCA 90 bp | ACACAACTATTTACAGGAAACTTTAAATCTTGGAATGGAGGAGTTTGTCATAGGTCCTCCAAAAGCAAATaGGTTCAGTCAAATGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TQLFTGNFKSWNGGVCHRSSKSK*VQSNGT Trigger: GGTGCCATTTGACTGAACCCATTTGCTTTTGGAGGA...CCTATGACAAACTCCTCCATTCCAAGATTTAAAGTTTCCTGTAAATAGTTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CCA 90 bp | ATGAATTTCTTAGGCAAATGGATGTATCTGGAGGATATCATTCTGAGTGAGGTAGCAATCTCACTGTGGTaGTATTCAAAAGTGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MNFLGKWMYLEDIILSEVAISLW*YSKVTV Trigger: GACTGTCACTTTTGAATACCACCACAGTGAGATTGC...TACCTCACTCAGAATGATATCCTCCAGATACATCCATTTGCCTAAGAAATTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTGTGGATACATCATTCCATCTTAGAATGGGGAACAAAATACCCATGTAAGCCACAGAGAACAAGTTaGACTAGGGTACAAATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KVWIHHSILEWGTKYPCKPQRTS*TRVQIG Trigger: TCCAATTTGTACCCTAGTCCAACTTGTTCTCTGTGG...CTTACATGGGTATTTTGTTCCCCATTCTAAGATGGAATGATGTATCCACACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGGAACAAATATTGGCAAGCTAGTACAAAATAATGAACCATCAGAATGTCCACAGAGAACAAGTTaGACTAGGGTACAAATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKGTNIGKLVQNNEPSECPQRTS*TRVQIG Trigger: TCCAATTTGTACCCTAGTCCAACTTGTTCTCTGTGG...ACATTCTGATGGTTCATTATTTTGTACTAGCTTGCCAATATTTGTTCCCTTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CCA 90 bp | TGGGATAGATCTTGTGAGTCAAAGAATGATGAAAGTGGCTGTGAACATAAATCTTATCCCAGAACAAAATaGAAGGCAATGACTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WDRSCESKNDESGCEHKSYPRTK*KAMTEP Trigger: AGGCTCAGTCATTGCCTTCCATTTTGTTCTGGGATA...AGATTTATGTTCACAGCCACTTTCATCATTCTTTGACTCACAAGATCTATCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTGTGGATACATCATTCCATCTTAGAATGGGGAACAAAATACCCATGTAAGTATCCCAGAACAAAATaGAAGGCAATGACTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KVWIHHSILEWGTKYPCKYPRTK*KAMTEP Trigger: AGGCTCAGTCATTGCCTTCCATTTTGTTCTGGGATA...CTTACATGGGTATTTTGTTCCCCATTCTAAGATGGAATGATGTATCCACACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR GCA 90 bp | AAAATGATGTTAGCCATTCCTCAATTGAGAGTCCCTGTTCTTTATACGTTCAAAGCCATGTCAAAATTGTaGAGTGCTGTCCATTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KMMLAIPQLRVPVLYTFKAMSKL*SAVHSN Trigger: ATTGGAATGGACAGCACTGCACAATTTTGACATGGC...TTTGAACGTATAAAGAACAGGGACTCTCAATTGAGGAATGGCTAACATCATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CCA 90 bp | ATGAATTTCTTAGGCAAATGGATGTATCTGGAGGATATCATTCTGAGTGAGGTATATCTGCTGTTTCATTaGAAACTGCATTTTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MNFLGKWMYLEDIILSEVYLLFH*KLHFLG Trigger: GCCCAGAAAATGCAGTTTCCAATGAAACAGCAGATA...TACCTCACTCAGAATGATATCCTCCAGATACATCCATTTGCCTAAGAAATTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR TCA 90 bp | CAACTACCAAACCTAGTCACTATTGCATATACCAGAAAGATTTTACTGACAGAATACAGATGTTTTCCATaGTGGTCCTATAAGGCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: QLPNLVTIAYTRKILLTEYRCFP*WSYKAY Trigger: ATAGGCCTTATAGGACCATCATGGAAAACATCTGTA...TTCTGTCAGTAAAATCTTTCTGGTATATGCAATAGTGACTAGGTTTGGTAGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGGAACAAATATTGGCAAGCTAGTACAAAATAATGAACCATCAGAATGTCTTGTCATGTATAACTaGATGTCTTCTGGGATCATA | + |
|
Preference number: 4 (lower is better) Translates to: GKGTNIGKLVQNNEPSECLVMYN*MSSGII Trigger: TATGATCCCAGAAGACATGCAGTTATACATGACAAG...ACATTCTGATGGTTCATTATTTTGTACTAGCTTGCCAATATTTGTTCCCTTCCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTGTGGATACATCATTCCATCTTAGAATGGGGAACAAAATACCCATGTAAGTTAGCAATCTCACTGTaGTGGTATTCAAAAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: KVWIHHSILEWGTKYPCKLAISL*WYSKVT Trigger: TGTCACTTTTGAATACCACCACAGTGAGATTGCTAA...CTTACATGGGTATTTTGTTCCCCATTCTAAGATGGAATGATGTATCCACACTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR GCA 90 bp | AATACCCATGTAAGGAGTTACAGAGACAAAGTTAAGTTAAAGCTGAGATGGAAGATCAAAGCAGCAATCTaGTGTTTGTTTCTGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NTHVRSYRDKVKLKLRWKIKAAI*CLFLMN Trigger: ATTCATCAGAAACAAACAGCAGATTGCTGCTTTGAT...CTTCCATCTCAGCTTTAACTTAACTTTGTCTCTGTAACTCCTTACATGGGTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS-3UTR CAA 90 bp | AGAAACTCTCCCATCCGGGGATCCATCCTATATACAACTACCAAACCTAGTCACAGGATGCAGGTGGCCTaGTTGGGATGTCCAATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RNSPIRGSILYTTTKPSHRMQVA*LGCPMK Trigger: CTTCATTGGACATCCCAACAAGGCCACCTGCATCCT...GTGACTAGGTTTGGTAGTTGTATATAGGATGGATCCCCGGATGGGAGAGTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CAA 90 bp | GGCAAATACAGAAGTGGATGCTCACAGTCATCTATTTGTTGGAACACAGGGCCCCCTGGAGAAGTGAGCTaGAAAGCCATGAGCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GKYRSGCSQSSICWNTGPPGEVS*KAMSTV Trigger: AACTGTGCTCATGGCTTTCAAGCTCACTTCTCCAGG...GGGCCCTGTGTTCCAACAAATAGATGACTGTGAGCATCCACTTCTGTATTTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS CCA 90 bp | TACATGTTACACTACACAGGGAGGAGGGAACTGATGATCCTCCTGTaGCCCAGTCCAAGTCTTCAGATATATGAAGTTGTTGGCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: YMLHYTGRRELMILL*PSPSLQIYEVVGSV Trigger: CACAGAGCCAACAACTTCATATATCTGAAGACTTGGACTGGGCCACAGGAGGATCATCAGTTCCCTCCTCCCTGTGTAGTGTAACATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CAA 90 bp | AAGCTGAGATGGAAGGAAGGACCATCCAGAAACTCTCCCATCCGGGGATCCATCGCAGCAATCTGCTGTTaGTTTCTGATGAATTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KLRWKEGPSRNSPIRGSIAAICC*FLMNFP Trigger: AGGAAAATTCATCAGAAACAAACAGCAGATTGCTGC...GATGGATCCCCGGATGGGAGAGTTTCTGGATGGTCCTTCCTTCCATCTCAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS-3UTR CAA 90 bp | CAAGGCTCAGGAAAATGTACAGAAGATGGTGGGATAGATCTTGTGAGTCAAAGAAGGGCCATGTCAAAATaGTGCAGTGCTGTCCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: QGSGKCTEDGGIDLVSQRRAMSK*CSAVHS Trigger: GGAATGGACAGCACTGCACAATTTTGACATGGCCCT...TCTTTGACTCACAAGATCTATCCCACCATCTTCTGTACATTTTCCTGAGCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS GCA 90 bp | TGGACACCTCACACACTGTTCCATATCTGCTGTTTCATTGGAAACTaGATTTTCTGGGCACTGATCACAATCAAAGCAGCAATCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WTPHTLFHICCFIGN*IFWALITIKAAICC Trigger: ACAGCAGATTGCTGCTTTGATTGTGATCAGTGCCCAGAAAATGCAGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTGAGGTGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS GCA 90 bp | GTTGGCATACTTATCATCTGGACACCTCACACACTGTTCCATATCTaGTGTTTCATTGGAAACTGCATTTTCTGGGCACTGATCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: VGILIIWTPHTLFHI*CFIGNCIFWALITI Trigger: GATTGTGATCAGTGCCCAGAAAATGCAGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTGAGGTGTCCAGATGATAAGTATGCCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS CCA 90 bp | ATAAAGGGAGGAGATGTTACTAACCAGATTCCACAGAGAACAAGTTaGACTAGGGTACAAATTGGAATGACCAAGTTAGGTGCCCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: IKGGDVTNQIPQRTS*TRVQIGMTKLGAPD Trigger: ATCAGGGGCACCTAACTTGGTCATTCCAATTTGTACCCTAGTCCAACTTGTTCTCTGTGGAATCTGGTTAGTAACATCTCCTCCCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CAA 90 bp | GTTGAATCTGGTCTAAGTAAAATAACACAACATTTTGGGAGAAAGATGCACCCTATGCAGGTGGCCTTGTaGGGATGTCCAATGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VESGLSKITQHFGRKMHPMQVAL*GCPMKS Trigger: GCTCTTCATTGGACATCCCAACAAGGCCACCTGCAT...AGGGTGCATCTTTCTCCCAAAATGTTGTGTTATTTTACTTAGACCAGATTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CAA 90 bp | AATACCCATGTAAGGAGTTACAGAGACAAAGTTAAGTTAAAGCTGAGATGGAAGAGGATGCAGGTGGCCTaGTTGGGATGTCCAATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NTHVRSYRDKVKLKLRWKRMQVA*LGCPMK Trigger: CTTCATTGGACATCCCAACAAGGCCACCTGCATCCT...CTTCCATCTCAGCTTTAACTTAACTTTGTCTCTGTAACTCCTTACATGGGTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS CCA 90 bp | CACACACTGTTCCATATCTGCTGTTTCATTGGAAACTGCATTTTCTaGGCACTGATCACAATCAAAGCAGCAATCTGCTGTTTGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HTLFHICCFIGNCIF*ALITIKAAICCLFL Trigger: CAGAAACAAACAGCAGATTGCTGCTTTGATTGTGATCAGTGCCCAGAAAATGCAGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS CCA 90 bp | TATCATCTGGACACCTCACACACTGTTCCATATCTGCTGTTTCATTaGAAACTGCATTTTCTGGGCACTGATCACAATCAAAGCAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: YHLDTSHTVPYLLFH*KLHFLGTDHNQSSN Trigger: ATTGCTGCTTTGATTGTGATCAGTGCCCAGAAAATGCAGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTGAGGTGTCCAGATGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS-3UTR CAA 90 bp | TGCTCACAGTCATCTATTTGTTGGAACACAGGGCCCCTAATGAAGGAGCTAGAAGTGTCCCAGAATTTGTaGAGAGTTTTACAGATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CSQSSICWNTGPLMKELEVSQNL*RVLQMF Trigger: AAACATCTGTAAAACTCTCAACAAATTCTGGGACAC...TTCTAGCTCCTTCATTAGGGGCCCTGTGTTCCAACAAATAGATGACTGTGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS-3UTR CAA 90 bp | TGGGATAGATCTTGTGAGTCAAAGAATGATGAAAGTGGCTGTGAACATAAATCTAGGGCCATGTCAAAATaGTGCAGTGCTGTCCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: WDRSCESKNDESGCEHKSRAMSK*CSAVHS Trigger: GGAATGGACAGCACTGCACAATTTTGACATGGCCCT...AGATTTATGTTCACAGCCACTTTCATCATTCTTTGACTCACAAGATCTATCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS-3UTR CAA 90 bp | ACACAACTATTTACAGGAAACTTTAAATCTTGGAATGGAGGAGTTTGTCATAGGATGCAGGTGGCCTTGTaGGGATGTCCAATGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TQLFTGNFKSWNGGVCHRMQVAL*GCPMKS Trigger: GCTCTTCATTGGACATCCCAACAAGGCCACCTGCAT...CCTATGACAAACTCCTCCATTCCAAGATTTAAAGTTTCCTGTAAATAGTTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS TCA 90 bp | CAGATTCCATGTCTTTGCATTTCTTCTCTCAAGTCTGATAGAAACTaGATACCTTGGTCATCATCTGAGATGACCAGTCCTATCCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QIPCLCISSLKSDRN*IPWSSSEMTSPIQV Trigger: GACTTGGATAGGACTGGTCATCTCAGATGATGACCAAGGTATTCAGTTTCTATCAGACTTGAGAGAAGAAATGCAAAGACATGGAATCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CAA 90 bp | GATCTGAAGAAAGATTACTGCACTGTGCATGGCAGCATGGAAGGAAGAAAGCTTGTGTCCCAGAATTTGTaGAGAGTTTTACAGATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: DLKKDYCTVHGSMEGRKLVSQNL*RVLQMF Trigger: AAACATCTGTAAAACTCTCAACAAATTCTGGGACAC...AAGCTTTCTTCCTTCCATGCTGCCATGCACAGTGCAGTAATCTTTCTTCAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CAA 90 bp | AAAATGATGTTAGCCATTCCTCAATTGAGAGTCCCTGTTCTTTATACGTTCAAACCTGGAGAAGTGAGCTaGAAAGCCATGAGCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KMMLAIPQLRVPVLYTFKPGEVS*KAMSTV Trigger: AACTGTGCTCATGGCTTTCAAGCTCACTTCTCCAGG...TTTGAACGTATAAAGAACAGGGACTCTCAATTGAGGAATGGCTAACATCATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS CCA 90 bp | TCTTCATTATTCTTTATCCTCCAAAAGCAAATGGGTTCAGTCAAATaGCACCAGATGAGAGAAAACTTCAGGAGCATAAAGGAAAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: SSLFFILQKQMGSVK*HQMRENFRSIKERP Trigger: TGGTCTTTCCTTTATGCTCCTGAAGTTTTCTCTCATCTGGTGCCATTTGACTGAACCCATTTGCTTTTGGAGGATAAAGAATAATGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CAA 90 bp | AAAATGATGTTAGCCATTCCTCAATTGAGAGTCCCTGTTCTTTATACGTTCAAAAGATATATGAAGTTGTaGGCTCTGTGGGAAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KMMLAIPQLRVPVLYTFKRYMKL*ALWETR Trigger: CCTTGTTTCCCACAGAGCCAACAACTTCATATATCT...TTTGAACGTATAAAGAACAGGGACTCTCAATTGAGGAATGGCTAACATCATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CAA 90 bp | AATACCCATGTAAGGAGTTACAGAGACAAAGTTAAGTTAAAGCTGAGATGGAAGGCAGCAATCTGCTGTTaGTTTCTGATGAATTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: NTHVRSYRDKVKLKLRWKAAICC*FLMNFP Trigger: AGGAAAATTCATCAGAAACAAACAGCAGATTGCTGC...CTTCCATCTCAGCTTTAACTTAACTTTGTCTCTGTAACTCCTTACATGGGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CAA 90 bp | AAAGTGTGGATACATCATTCCATCTTAGAATGGGGAACAAAATACCCATGTAAGATATCTGCTGTTTCATaGGAAACTGCATTTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KVWIHHSILEWGTKYPCKISAVS*ETAFSG Trigger: CCCAGAAAATGCAGTTTCCAATGAAACAGCAGATAT...CTTACATGGGTATTTTGTTCCCCATTCTAAGATGGAATGATGTATCCACACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CAA 90 bp | TGGGATAGATCTTGTGAGTCAAAGAATGATGAAAGTGGCTGTGAACATAAATCTATATCTGCTGTTTCATaGGAAACTGCATTTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WDRSCESKNDESGCEHKSISAVS*ETAFSG Trigger: CCCAGAAAATGCAGTTTCCAATGAAACAGCAGATAT...AGATTTATGTTCACAGCCACTTTCATCATTCTTTGACTCACAAGATCTATCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CAA 90 bp | TGCAAAGCTTCTTGCCTACACAACTATTTACAGGAAACTTTAAATCTTGGAATGTTCAGATATATGAAGTaGTTGGCTCTGTGGGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: CKASCLHNYLQETLNLGMFRYMK*LALWET Trigger: TGTTTCCCACAGAGCCAACAACTTCATATATCTGAA...CATTCCAAGATTTAAAGTTTCCTGTAAATAGTTGTGTAGGCAAGAAGCTTTGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS-3UTR CAA 90 bp | ACACAACTATTTACAGGAAACTTTAAATCTTGGAATGGAGGAGTTTGTCATAGGTTCAGATATATGAAGTaGTTGGCTCTGTGGGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: TQLFTGNFKSWNGGVCHRFRYMK*LALWET Trigger: TGTTTCCCACAGAGCCAACAACTTCATATATCTGAA...CCTATGACAAACTCCTCCATTCCAAGATTTAAAGTTTCCTGTAAATAGTTGTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS CCA 72 bp | CACTACACAGGGAGGAGGGAACTGATGATCCTCCTGTaGCCCAGTCCAAGTCTTCAGATATATGAAGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: HYTGRRELMILL*PSPSLQIYEVV Trigger: AACAACTTCATATATCTGAAGACTTGGACTGGGCCACAGGAGGATCATCAGTTCCCTCCTCCCTGTGTAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS CAA 90 bp | GTGAAAAATACTCCAAATGTGGTCTGCTGCAGGATGCAGGTGGCCTaGTTGGGATGTCCAATGAAGAGCAATGGGCAGAGAAAACAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VKNTPNVVCCRMQVA*LGCPMKSNGQRKQK Trigger: CTTCTGTTTTCTCTGCCCATTGCTCTTCATTGGACATCCCAACAAGGCCACCTGCATCCTGCAGCAGACCACATTTGGAGTATTTTTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS CAA 90 bp | CCTGATGCCAGCATCCCTCTCATCTTTCCCCCTGGAGAAGTGAGCTaGAAAGCCATGAGCACAGTTATTGTTTTAGCCAACACTGTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PDASIPLIFPPGEVS*KAMSTVIVLANTVE Trigger: TTCTACAGTGTTGGCTAAAACAATAACTGTGCTCATGGCTTTCAAGCTCACTTCTCCAGGGGGAAAGATGAGAGGGATGCTGGCATCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
||
| CDS CAA 90 bp | AAAAATACTCCAAATGTGGTCTGCTGCAGGATGCAGGTGGCCTTGTaGGGATGTCCAATGAAGAGCAATGGGCAGAGAAAACAGAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: KNTPNVVCCRMQVAL*GCPMKSNGQRKQKT Trigger: AGTCTTCTGTTTTCTCTGCCCATTGCTCTTCATTGGACATCCCAACAAGGCCACCTGCATCCTGCAGCAGACCACATTTGGAGTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS CAA 72 bp | TCCTGTGGCCCAGTCCAAGTCTTCAGATATATGAAGTaGTTGGCTCTGTGGGAAACAAGGCAAATAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SCGPVQVFRYMK*LALWETRQIAS Trigger: GGAAGCTATTTGCCTTGTTTCCCACAGAGCCAACAACTTCATATATCTGAAGACTTGGACTGGGCCACAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS CAA 72 bp | GACACAGCTCTTTGGAGGCAGTGGGTTTTCTCTAAGTaGGCATACTTATCATCTGGACACCTCACACACTGT | + |
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Preference number: 6 (lower is better) Translates to: DTALWRQWVFSK*AYLSSGHLTHC Trigger: ACAGTGTGTGAGGTGTCCAGATGATAAGTATGCCAACTTAGAGAAAACCCACTGCCTCCAAAGAGCTGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS CAA 72 bp | AGCATCCCTCTCATCTTTCCCCCTGGAGAAGTGAGCTaGAAAGCCATGAGCACAGTTATTGTTTTAGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: SIPLIFPPGEVS*KAMSTVIVLAN Trigger: GTTGGCTAAAACAATAACTGTGCTCATGGCTTTCAAGCTCACTTCTCCAGGGGGAAAGATGAGAGGGATGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS CCA 72 bp | ACACAGCTCTTTGGAGGCAGTGGGTTTTCTCTAAGTTaGCATACTTATCATCTGGACACCTCACACACTGTT | + |
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Preference number: 6 (lower is better) Translates to: TQLFGGSGFSLS*HTYHLDTSHTV Trigger: AACAGTGTGTGAGGTGTCCAGATGATAAGTATGCCAACTTAGAGAAAACCCACTGCCTCCAAAGAGCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS CAA 72 bp | TGTGGCCCAGTCCAAGTCTTCAGATATATGAAGTTGTaGGCTCTGTGGGAAACAAGGCAAATAGCTTCCGAT | + |
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Preference number: 6 (lower is better) Translates to: CGPVQVFRYMKL*ALWETRQIASD Trigger: ATCGGAAGCTATTTGCCTTGTTTCCCACAGAGCCAACAACTTCATATATCTGAAGACTTGGACTGGGCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS CAA 90 bp | ATGTTGCTGAGAATGCGGTTATTGGCCTTCACAATGGGAGTATCCTaGTACTTCACAAAAGTGACTAGTACTAGAACTGTGAGGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: MLLRMRLLAFTMGVS*YFTKVTSTRTVRAE Trigger: CTCTGCCCTCACAGTTCTAGTACTAGTCACTTTTGTGAAGTACAAGGATACTCCCATTGTGAAGGCCAATAACCGCATTCTCAGCAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS GCA 72 bp | GCCTTCCTCACTCAGGGCCATGTCAAAATTGTGCAGTaGTGTCCATTCCAATGTGTTGTTGAATGTAAAATG | + |
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Preference number: 6 (lower is better) Translates to: AFLTQGHVKIVQ*CPFQCVVECKM Trigger: CATTTTACATTCAACAACACATTGGAATGGACAGCACTGCACAATTTTGACATGGCCCTGAGTGAGGAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS GCA 72 bp | CTTATCATCTGGACACCTCACACACTGTTCCATATCTaGTGTTTCATTGGAAACTGCATTTTCTGGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: LIIWTPHTLFHI*CFIGNCIFWAL Trigger: CAGTGCCCAGAAAATGCAGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTGAGGTGTCCAGATGATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS TCA 72 bp | GTAAATATCCTGGATTTCAGTGTGGAAGACACCTGCTaGCAGTCAGTGAATGTTCCTTTGGGTTCTTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: VNILDFSVEDTC*QSVNVPLGSSV Trigger: AACAGAAGAACCCAAAGGAACATTCACTGACTGTCAGCAGGTGTCTTCCACACTGAAATCCAGGATATTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS GCA 72 bp | CACACACTGTTCCATATCTGCTGTTTCATTGGAAACTaGATTTTCTGGGCACTGATCACAATCAAAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: HTLFHICCFIGN*IFWALITIKAA Trigger: TGCTGCTTTGATTGTGATCAGTGCCCAGAAAATGCAGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS CCA 72 bp | GACACCTCACACACTGTTCCATATCTGCTGTTTCATTaGAAACTGCATTTTCTGGGCACTGATCACAATCAA | + |
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Preference number: 6 (lower is better) Translates to: DTSHTVPYLLFH*KLHFLGTDHNQ Trigger: TTGATTGTGATCAGTGCCCAGAAAATGCAGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTGAGGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS TCA 72 bp | TCTGAGATGACCAGTCCTATCCAAGTCCATCTAAAATaGAGCATCAAAGTGATCATGCCATGGGACAAATGT | + |
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Preference number: 6 (lower is better) Translates to: SEMTSPIQVHLK*SIKVIMPWDKC Trigger: ACATTTGTCCCATGGCATGATCACTTTGATGCTTCATTTTAGATGGACTTGGATAGGACTGGTCATCTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS CCA 72 bp | GGAGATGTTACTAACCAGATTCCACAGAGAACAAGTTaGACTAGGGTACAAATTGGAATGACCAAGTTAGGT | + |
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Preference number: 6 (lower is better) Translates to: GDVTNQIPQRTS*TRVQIGMTKLG Trigger: ACCTAACTTGGTCATTCCAATTTGTACCCTAGTCCAACTTGTTCTCTGTGGAATCTGGTTAGTAACATCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS TCA 72 bp | TGTCTTTGCATTTCTTCTCTCAAGTCTGATAGAAACTaGATACCTTGGTCATCATCTGAGATGACCAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: CLCISSLKSDRN*IPWSSSEMTSP Trigger: AGGACTGGTCATCTCAGATGATGACCAAGGTATTCAGTTTCTATCAGACTTGAGAGAAGAAATGCAAAGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS CCA 72 bp | TTCTTTATCCTCCAAAAGCAAATGGGTTCAGTCAAATaGCACCAGATGAGAGAAAACTTCAGGAGCATAAAG | + |
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Preference number: 6 (lower is better) Translates to: FFILQKQMGSVK*HQMRENFRSIK Trigger: CTTTATGCTCCTGAAGTTTTCTCTCATCTGGTGCCATTTGACTGAACCCATTTGCTTTTGGAGGATAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS CCA 72 bp | GTCCAAGTCTTCAGATATATGAAGTTGTTGGCTCTGTaGGAAACAAGGCAAATAGCTTCCGATTTTCACTTT | + |
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Preference number: 6 (lower is better) Translates to: VQVFRYMKLLAL*ETRQIASDFHF Trigger: AAAGTGAAAATCGGAAGCTATTTGCCTTGTTTCCCACAGAGCCAACAACTTCATATATCTGAAGACTTGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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| CDS GCA 72 bp | TGGTCCTATAAGGCCTATGTAACAGGTTCCATAACCTaGACATATATAATCAGTAAAATCCACAGTAAATTT | + |
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Preference number: 6 (lower is better) Translates to: WSYKAYVTGSIT*TYIISKIHSKF Trigger: AAATTTACTGTGGATTTTACTGATTATATATGTGCAGGTTATGGAACCTGTTACATAGGCCTTATAGGACCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170341.3 ENSMUST00000233137.2 |
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