Pregenerated sensors for VMN2R130 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095658Ensembl transcript IDs: ENSMUST00000175853.3
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTAAATAGTTTACTTATTCACCTTCTTTCTGGTTCACAACTGGGCTaGGAGCGGCAGATCATGTACCTCAGAACTGACTGTAACCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: LNSLLIHLLSGSQLG*ERQIMYLRTDCNPS Trigger: GGAAGGGTTACAGTCAGTTCTGAGGTACATGATCTGCCGCTCCCAGCCCAGTTGTGAACCAGAAAGAAGGTGAATAAGTAAACTATTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR TCA 90 bp | GGGCTGCTGATCTGTCCTATTGACACTGTCCTTGGCCTTAAGCTTTaGTGTTTTATGGGATACCATTTATCGATTATTGATCTTAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: GLLICPIDTVLGLKL*CFMGYHLSIIDLRA Trigger: GGCTCTAAGATCAATAATCGATAAATGGTATCCCATAAAACATCAAAGCTTAAGGCCAAGGACAGTGTCAATAGGACAGATCAGCAGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR TCA 90 bp | CACAATGAAAGGACCAACCCTAAGATTAATAACTATAGAATAGAGTaGCGATCCCCAATTCAAATGGGCAACAAACATCTTCAACAAGAT | + |
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Preference number: 1 (lower is better) Translates to: HNERTNPKINNYRIE*RSPIQMGNKHLQQD Trigger: ATCTTGTTGAAGATGTTTGTTGCCCATTTGAATTGGGGATCGTCACTCTATTCTATAGTTATTAATCTTAGGGTTGGTCCTTTCATTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR TCA 90 bp | CTCAGAAGACATGATATTGCTAGGCAAAATCATAAGAGGAAACAGTaGGAGTCATTCCAAAAACAGATACATATGACAATGCAATCCAAT | + |
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Preference number: 1 (lower is better) Translates to: LRRHDIARQNHKRKQ*ESFQKQIHMTMQSN Trigger: ATTGGATTGCATTGTCATATGTATCTGTTTTTGGAATGACTCTCACTGTTTCCTCTTATGATTTTGCCTAGCAATATCATGTCTTCTGAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR TCA 90 bp | TATGTTGAGATCCTTGGTCCAACTATACTTGCGTTTTGTTTAGGGTaGTATGTGTTGATCTATTTTTGTTATTCTACATGTAGACTTCCC | + |
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Preference number: 1 (lower is better) Translates to: YVEILGPTILAFCLG*YVLIYFCYSTCRLP Trigger: GGGAAGTCTACATGTAGAATAACAAAAATAGATCAACACATATCACCCTAAACAAAACGCAAGTATAGTTGGACCAAGGATCTCAACATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR TCA 90 bp | GTACCACTTTCTCTTCTATCAGATTTAGTGTATCCAATTTTATGTTaGGATCCTTGGTCCAACTATACTTGCGTTTTGTTTAGGGTGATA | + |
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Preference number: 1 (lower is better) Translates to: VPLSLLSDLVYPILC*DPWSNYTCVLFRVI Trigger: TATCACCCTAAACAAAACGCAAGTATAGTTGGACCAAGGATCTCAACATAAAATTGGATACACTAAATCTGATAGAAGAGAAAGTGGTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR-3UTR CCA 90 bp | TATATGGTGGGTTATGTTGATGGATTTTCATATACTGAACCATCCATGCATCCCGGTTCACAACTGGGCTaGGAGCGGCAGATCATGTAC | + |
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Preference number: 2 (lower is better) Translates to: YMVGYVDGFSYTEPSMHPGSQLG*ERQIMY Trigger: GTACATGATCTGCCGCTCCCAGCCCAGTTGTGAACC...GGGATGCATGGATGGTTCAGTATATGAAAATCCATCAACATAACCCACCATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR-3UTR TCA 90 bp | AAACCAATACCCCTTGGAAACATTAGAAGCAAGTTCTTCCACAACAAACCACGGGGTTCCATGAGGTGCTaGGAAGAAGGTTTCATTTGG | + |
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Preference number: 2 (lower is better) Translates to: KPIPLGNIRSKFFHNKPRGSMRC*EEGFIW Trigger: CCAAATGAAACCTTCTTCTCAGCACCTCATGGAACC...CCGTGGTTTGTTGTGGAAGAACTTGCTTCTAATGTTTCCAAGGGGTATTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR-3UTR CCA 90 bp | TATATGGTGGGTTATGTTGATGGATTTTCATATACTGAACCATCCATGCATCCCCCAGAGATAACCAGATaGGGAGAGGCAAGCAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: YMVGYVDGFSYTEPSMHPPEITR*GEASKR Trigger: TCTCTTGCTTGCCTCTCCCCATCTGGTTATCTCTGG...GGGATGCATGGATGGTTCAGTATATGAAAATCCATCAACATAACCCACCATATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR-3UTR TCA 90 bp | GTGCTGAGAAGAAGGTTTCATTTGGGGGTGAAATGGTCTGTAGATATCAAATTCCATAAGAGGAAACAGTaGGAGTCATTCCAAAAACAG | + |
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Preference number: 2 (lower is better) Translates to: VLRRRFHLGVKWSVDIKFHKRKQ*ESFQKQ Trigger: CTGTTTTTGGAATGACTCTCACTGTTTCCTCTTATG...GAATTTGATATCTACAGACCATTTCACCCCCAAATGAAACCTTCTTCTCAGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR-3UTR TCA 90 bp | AAACCAATACCCCTTGGAAACATTAGAAGCAAGTTCTTCCACAACAAACCACGGGTAAAAGTGGGTTGTTaGAATCTCCAACTACTATTG | + |
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Preference number: 2 (lower is better) Translates to: KPIPLGNIRSKFFHNKPRVKVGC*NLQLLL Trigger: CAATAGTAGTTGGAGATTTCAACAACCCACTTTTAC...CCGTGGTTTGTTGTGGAAGAACTTGCTTCTAATGTTTCCAAGGGGTATTGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR CAA 90 bp | TTATGGGATACCATTTATCGATTATTGATCTTAGAGCCTGAGCCATaGATGATCTATCTGTTCAGGAACTTGTCTCCTATACCAGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: LWDTIYRLLILEPEP*MIYLFRNLSPIPVH Trigger: ATGCACTGGTATAGGAGACAAGTTCCTGAACAGATAGATCATCAATGGCTCAGGCTCTAAGATCAATAATCGATAAATGGTATCCCATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR-3UTR CCA 90 bp | TATATGGTGGGTTATGTTGATGGATTTTCATATACTGAACCATCCATGCATCCCTTCTATTTCAATGACTaGTCCCTTGGTAAAAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: YMVGYVDGFSYTEPSMHPFYFND*SLGKSG Trigger: CCCACTTTTACCAAGGGACCAGTCATTGAAATAGAA...GGGATGCATGGATGGTTCAGTATATGAAAATCCATCAACATAACCCACCATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR-3UTR TCA 90 bp | AGAAGAAGGTTTCATTTGGGGGTGAAATGGTCTGTAGATATCAAATTCATTTGGAGGAGTTGGTATGATTaGGTATTGAATCATTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: RRRFHLGVKWSVDIKFIWRSWYD*VLNHLL Trigger: GAGCAAATGATTCAATACTCAATCATACCAACTCCT...CCAAATGAATTTGATATCTACAGACCATTTCACCCCCAAATGAAACCTTCTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR CCA 72 bp | ATCTTTCAGGTCCACATCTGTGCCTGTGAAGAGATCTaGTGCTCTAGCTCACCCAACTCCACCCACATCCAG | + |
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Preference number: 3 (lower is better) Translates to: IFQVHICACEEI*CSSSPNSTHIQ Trigger: CTGGATGTGGGTGGAGTTGGGTGAGCTAGAGCACCAGATCTCTTCACAGGCACAGATGTGGACCTGAAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR CCA 72 bp | TTACTTATTCACCTTCTTTCTGGTTCACAACTGGGCTaGGAGCGGCAGATCATGTACCTCAGAACTGACTGT | + |
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Preference number: 3 (lower is better) Translates to: LLIHLLSGSQLG*ERQIMYLRTDC Trigger: ACAGTCAGTTCTGAGGTACATGATCTGCCGCTCCCAGCCCAGTTGTGAACCAGAAAGAAGGTGAATAAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR CCA 72 bp | ATAGTTTACTTATTCACCTTCTTTCTGGTTCACAACTaGGCTGGGAGCGGCAGATCATGTACCTCAGAACTG | + |
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Preference number: 3 (lower is better) Translates to: IVYLFTFFLVHN*AGSGRSCTSEL Trigger: CAGTTCTGAGGTACATGATCTGCCGCTCCCAGCCCAGTTGTGAACCAGAAAGAAGGTGAATAAGTAAACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR TCA 72 bp | TGTCTAATTATGTGGGCAATTTTAGAGAAGGTTCCATaGGGTGCTGAGAAGAAGGTTTCATTTGGGGGTGAA | + |
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Preference number: 3 (lower is better) Translates to: CLIMWAILEKVP*GAEKKVSFGGE Trigger: TTCACCCCCAAATGAAACCTTCTTCTCAGCACCTCATGGAACCTTCTCTAAAATTGCCCACATAATTAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR TCA 72 bp | ATGGGATACCATTTATCGATTATTGATCTTAGAGCCTaGGCCATTGATGATCTATCTGTTCAGGAACTTGTC | + |
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Preference number: 3 (lower is better) Translates to: MGYHLSIIDLRA*AIDDLSVQELV Trigger: GACAAGTTCCTGAACAGATAGATCATCAATGGCTCAGGCTCTAAGATCAATAATCGATAAATGGTATCCCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR GCA 72 bp | GTTTCAGAATCAATACAATGCAATTTTCATGACTATTaGTCTGGAGTGAAGTTTGAGGTCAGGCATGGTGAT | + |
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Preference number: 3 (lower is better) Translates to: VSESIQCNFHDY*SGVKFEVRHGD Trigger: ATCACCATGCCTGACCTCAAACTTCACTCCAGAGCAATAGTCATGAAAATTGCATTGTATTGATTCTGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR-3UTR CAA 90 bp | TCTCTGTTTAGTTTCTATTTCAATGACTGGTCCCTTGGTAAAAGTGGGTTGTTGTTCTATTCATTGATGTaGAGAGATGTGAAAGACCAG | + |
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Preference number: 3 (lower is better) Translates to: SLFSFYFNDWSLGKSGLLFYSLM*RDVKDQ Trigger: CTGGTCTTTCACATCTCTCAACATCAATGAATAGAA...CAACAACCCACTTTTACCAAGGGACCAGTCATTGAAATAGAAACTAAACAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR TCA 72 bp | AGGACCAACCCTAAGATTAATAACTATAGAATAGAGTaGCGATCCCCAATTCAAATGGGCAACAAACATCTT | + |
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Preference number: 3 (lower is better) Translates to: RTNPKINNYRIE*RSPIQMGNKHL Trigger: AAGATGTTTGTTGCCCATTTGAATTGGGGATCGTCACTCTATTCTATAGTTATTAATCTTAGGGTTGGTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR CCA 72 bp | GAGGTGCTGAGAAGAAGGTTTCATTTGGGGGTGAAATaGTCTGTAGATATCAAATTCATTTGGTTTATAACT | + |
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Preference number: 3 (lower is better) Translates to: EVLRRRFHLGVK*SVDIKFIWFIT Trigger: AGTTATAAACCAAATGAATTTGATATCTACAGACCATTTCACCCCCAAATGAAACCTTCTTCTCAGCACCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR TCA 72 bp | GGAAACAGTGAGAGTCATTCCAAAAACAGATACATATaGCAATGCAATCCAATATTAGGTGACTATGAACCA | + |
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Preference number: 3 (lower is better) Translates to: GNSESHSKNRYI*QCNPILGDYEP Trigger: TGGTTCATAGTCACCTAATATTGGATTGCATTGTCATATGTATCTGTTTTTGGAATGACTCTCACTGTTTCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR TCA 72 bp | ATTTGCTCTACAAGAGCAGGGCATGATTTTAATTGCTaGGACATAATACCATCTTCTGAGATAATCTATCAG | + |
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Preference number: 3 (lower is better) Translates to: ICSTRAGHDFNC*DIIPSSEIIYQ Trigger: CTGATAGATTATCTCAGAAGATGGTATTATGTCTCAGCAATTAAAATCATGCCCTGCTCTTGTAGAGCAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR TCA 72 bp | CAGGATTGTATTTCTCTTTCTGGCAAAGAGGACTATTaGTGGAAAACATTGTGGATAATTATAGGAGACAAT | + |
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Preference number: 3 (lower is better) Translates to: QDCISLSGKEDY*WKTLWIIIGDN Trigger: ATTGTCTCCTATAATTATCCACAATGTTTTCCATCAATAGTCCTCTTTGCCAGAAAGAGAAATACAATCCTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR CCA 72 bp | TTGGGGGTGAAATGGTCTGTAGATATCAAATTCATTTaGTTTATAACTTCTGTTAGATTCAATGTGTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: LGVKWSVDIKFI*FITSVRFNVSL Trigger: CAGAGACACATTGAATCTAACAGAAGTTATAAACCAAATGAATTTGATATCTACAGACCATTTCACCCCCAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR TCA 90 bp | GTGCTGAGAAGAAGGTTTCATTTGGGGGTGAAATGGTCTGTAGATATCAAATTCAAAGAGGGCACAACCTaGTCCCAGGTTTCCATCCTT | + |
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Preference number: 4 (lower is better) Translates to: VLRRRFHLGVKWSVDIKFKEGTT*SQVSIL Trigger: AAGGATGGAAACCTGGGATCAGGTTGTGCCCTCTTT...GAATTTGATATCTACAGACCATTTCACCCCCAAATGAAACCTTCTTCTCAGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR TCA 90 bp | TCTCTGTTTAGTTTCTATTTCAATGACTGGTCCCTTGGTAAAAGTGGGTTGTTGAGTTTGGATGGCCAATaGAGAGCAAGGGGCAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: SLFSFYFNDWSLGKSGLLSLDGQ*RARGRG Trigger: TCCTCTGCCCCTTGCTCTTCATTGGCCATCCAAACT...CAACAACCCACTTTTACCAAGGGACCAGTCATTGAAATAGAAACTAAACAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR CAA 72 bp | GAGCCTGAGCCATTGATGATCTATCTGTTCAGGAACTaGTCTCCTATACCAGTGCATTCAAGAGTACCACTT | + |
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Preference number: 4 (lower is better) Translates to: EPEPLMIYLFRN*SPIPVHSRVPL Trigger: AAGTGGTACTCTTGAATGCACTGGTATAGGAGACAAGTTCCTGAACAGATAGATCATCAATGGCTCAGGCTC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR TCA 90 bp | AAACCAATACCCCTTGGAAACATTAGAAGCAAGTTCTTCCACAACAAACCACGGCCCACTGTGAGGTGGTaGCCCATATTCTCTTTATAT | + |
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Preference number: 4 (lower is better) Translates to: KPIPLGNIRSKFFHNKPRPTVRW*PIFSLY Trigger: ATATAAAGAGAATATGGGTCACCACCTCACAGTGGG...CCGTGGTTTGTTGTGGAAGAACTTGCTTCTAATGTTTCCAAGGGGTATTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR GCA 90 bp | AGAAGAAGGTTTCATTTGGGGGTGAAATGGTCTGTAGATATCAAATTCATTTGGTTTCTGGGCAGGGCCTaGAATCAAAACAGCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RRRFHLGVKWSVDIKFIWFLGRA*NQNSRL Trigger: CAGCCTGCTGTTTTGATTGCAGGCCCTGCCCAGAAA...CCAAATGAATTTGATATCTACAGACCATTTCACCCCCAAATGAAACCTTCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR CCA 90 bp | TATATGGTGGGTTATGTTGATGGATTTTCATATACTGAACCATCCATGCATCCCCATCATTGTCTGAGATaGCCAACCCTACCCAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: YMVGYVDGFSYTEPSMHPHHCLR*PTLPSS Trigger: GGAACTGGGTAGGGTTGGCCATCTCAGACAATGATG...GGGATGCATGGATGGTTCAGTATATGAAAATCCATCAACATAACCCACCATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR CCA 90 bp | AAACCAATACCCCTTGGAAACATTAGAAGCAAGTTCTTCCACAACAAACCACGGTATTGGCCTTCACTATaGGAGTACTGTGGTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: KPIPLGNIRSKFFHNKPRYWPSL*EYCGAS Trigger: TGAAGCACCACAGTACTCCCATAGTGAAGGCCAATA...CCGTGGTTTGTTGTGGAAGAACTTGCTTCTAATGTTTCCAAGGGGTATTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR TCA 90 bp | TATATGGTGGGTTATGTTGATGGATTTTCATATACTGAACCATCCATGCATCCCGGCCATTGTACTGCTTaGATAAAGAGGGCACAACCT | + |
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Preference number: 4 (lower is better) Translates to: YMVGYVDGFSYTEPSMHPGHCTA*IKRAQP Trigger: AGGTTGTGCCCTCTTTATTCAAGCAGTACAATGGCC...GGGATGCATGGATGGTTCAGTATATGAAAATCCATCAACATAACCCACCATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR TCA 90 bp | GTGCTGAGAAGAAGGTTTCATTTGGGGGTGAAATGGTCTGTAGATATCAAATTCCACAGTAAAAGGCACTaGCTGAACCCTTGTTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: VLRRRFHLGVKWSVDIKFHSKRH*LNPCCK Trigger: TTTGCAACAAGGGTTCAGTCAGTGCCTTTTACTGTG...GAATTTGATATCTACAGACCATTTCACCCCCAAATGAAACCTTCTTCTCAGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR GCA 90 bp | GTGCTGAGAAGAAGGTTTCATTTGGGGGTGAAATGGTCTGTAGATATCAAATTCAACAGCCACAGTGAATaGAACTCCAAACGTGACTTG | + |
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Preference number: 4 (lower is better) Translates to: VLRRRFHLGVKWSVDIKFNSHSE*NSKRDL Trigger: CAAGTCACGTTTGGAGTTGCATTCACTGTGGCTGTT...GAATTTGATATCTACAGACCATTTCACCCCCAAATGAAACCTTCTTCTCAGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR TCA 90 bp | TCTCTGTTTAGTTTCTATTTCAATGACTGGTCCCTTGGTAAAAGTGGGTTGTTGAACCATTCCAATGGGTaGTTGGAAGAGCAGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SLFSFYFNDWSLGKSGLLNHSNG*LEEQFF Trigger: GAAGAACTGCTCTTCCAATCACCCATTGGAATGGTT...CAACAACCCACTTTTACCAAGGGACCAGTCATTGAAATAGAAACTAAACAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR TCA 90 bp | GTGCTGAGAAGAAGGTTTCATTTGGGGGTGAAATGGTCTGTAGATATCAAATTCCAAACAATGATAATGTaGCCATGCTCTGATCGTGCA | + |
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Preference number: 4 (lower is better) Translates to: VLRRRFHLGVKWSVDIKFQTMIM*PCSDRA Trigger: TGCACGATCAGAGCATGGTCACATTATCATTGTTTG...GAATTTGATATCTACAGACCATTTCACCCCCAAATGAAACCTTCTTCTCAGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR TCA 90 bp | AAACCAATACCCCTTGGAAACATTAGAAGCAAGTTCTTCCACAACAAACCACGGGTGAGCATGGGAAGATaGTTTCTTTCTGATCATTTG | + |
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Preference number: 4 (lower is better) Translates to: KPIPLGNIRSKFFHNKPRVSMGR*FLSDHL Trigger: CAAATGATCAGAAAGAAATCATCTTCCCATGCTCAC...CCGTGGTTTGTTGTGGAAGAACTTGCTTCTAATGTTTCCAAGGGGTATTGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR CCA 90 bp | TCTCTGTTTAGTTTCTATTTCAATGACTGGTCCCTTGGTAAAAGTGGGTTGTTGCTTCATGATCACTCATaGCAGGATGAAAGGGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: SLFSFYFNDWSLGKSGLLLHDHS*QDERVH Trigger: ATGGACCCTTTCATCCTGCCATGAGTGATCATGAAG...CAACAACCCACTTTTACCAAGGGACCAGTCATTGAAATAGAAACTAAACAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR CCA 90 bp | TCTCTGTTTAGTTTCTATTTCAATGACTGGTCCCTTGGTAAAAGTGGGTTGTTGATCAAAACAGCAGGCTaGCATTCCATTCCTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SLFSFYFNDWSLGKSGLLIKTAG*HSIPPE Trigger: TTCAGGAGGAATGGAATGCCAGCCTGCTGTTTTGAT...CAACAACCCACTTTTACCAAGGGACCAGTCATTGAAATAGAAACTAAACAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR TCA 90 bp | GTGCTGAGAAGAAGGTTTCATTTGGGGGTGAAATGGTCTGTAGATATCAAATTCCAGTTCCAACTGAAATaGATTATGAAGGAGACCATG | + |
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Preference number: 4 (lower is better) Translates to: VLRRRFHLGVKWSVDIKFQFQLK*IMKETM Trigger: CATGGTCTCCTTCATAATTCATTTCAGTTGGAACTG...GAATTTGATATCTACAGACCATTTCACCCCCAAATGAAACCTTCTTCTCAGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR TCA 90 bp | TCTCTGTTTAGTTTCTATTTCAATGACTGGTCCCTTGGTAAAAGTGGGTTGTTGTACTTCATCATTCTTTaGGGGGCTGTGACTCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: SLFSFYFNDWSLGKSGLLYFIIL*GAVTLN Trigger: ATTCAGAGTCACAGCCCCTCAAAGAATGATGAAGTA...CAACAACCCACTTTTACCAAGGGACCAGTCATTGAAATAGAAACTAAACAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR CAA 72 bp | AGAAGGTTCCATGAGGTGCTGAGAAGAAGGTTTCATTaGGGGGTGAAATGGTCTGTAGATATCAAATTCATT | + |
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Preference number: 4 (lower is better) Translates to: RRFHEVLRRRFH*GVKWSVDIKFI Trigger: AATGAATTTGATATCTACAGACCATTTCACCCCCAAATGAAACCTTCTTCTCAGCACCTCATGGAACCTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR CAA 72 bp | ATTTCTTCCCTGAACAAGTTATCAAGGAGTAGACCGTaGTTCAGCATGCATGAGTATGTGGACTTTCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: ISSLNKLSRSRP*FSMHEYVDFLF Trigger: AAACAGAAAGTCCACATACTCATGCATGCTGAACAACGGTCTACTCCTTGATAACTTGTTCAGGGAAGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR GCA 90 bp | AGAAGAAGGTTTCATTTGGGGGTGAAATGGTCTGTAGATATCAAATTCATTTGGAGGAACCCAGCTTGTTaGAGGCATATTTTTGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: RRRFHLGVKWSVDIKFIWRNPAC*RHIFVL Trigger: AAGGACAAAAATATGCCTGCAACAAGCTGGGTTCCT...CCAAATGAATTTGATATCTACAGACCATTTCACCCCCAAATGAAACCTTCTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR CCA 90 bp | TCTCTGTTTAGTTTCTATTTCAATGACTGGTCCCTTGGTAAAAGTGGGTTGTTGAGAAATTTCATTTTCTaGGCAGGGCCTGCAATCAAA | + |
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Preference number: 4 (lower is better) Translates to: SLFSFYFNDWSLGKSGLLRNFIF*AGPAIK Trigger: TTTGATTGCAGGCCCTGCCCAGAAAATGAAATTTCT...CAACAACCCACTTTTACCAAGGGACCAGTCATTGAAATAGAAACTAAACAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR CAA 72 bp | TCTTGTGTTTCATTGGGTGTAATTATCCTACTTTTATaGGGTTTTCCTTCTAATGTCCTCTGTAGGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SCVSLGVIILLL*GFPSNVLCRAG Trigger: TCCAGCCCTACAGAGGACATTAGAAGGAAAACCCAATAAAAGTAGGATAATTACACCCAATGAAACACAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| 3UTR CAA 72 bp | AAGCAAGAGAACACAAGCAATAGAAACCAATACCCCTaGGAAACATTAGAAGCAAGTTCTTCCACAACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KQENTSNRNQYP*ETLEASSSTTN Trigger: GTTTGTTGTGGAAGAACTTGCTTCTAATGTTTCCAAGGGGTATTGGTTTCTATTGCTTGTGTTCTCTTGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR TCA 90 bp | TATATGGTGGGTTATGTTGATGGATTTTCATATACTGAACCATCCATGCATCCCCTTACATTTAGGTGCTaGGTCTTCACAGTTAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: YMVGYVDGFSYTEPSMHPLTFRC*VFTVKV Trigger: TACTTTAACTGTGAAGACTCAGCACCTAAATGTAAG...GGGATGCATGGATGGTTCAGTATATGAAAATCCATCAACATAACCCACCATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR GCA 90 bp | AGAAGAAGGTTTCATTTGGGGGTGAAATGGTCTGTAGATATCAAATTCATTTGGGGCTGTGACTCTGAATaGCAGTACAATAGTAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRRFHLGVKWSVDIKFIWGCDSE*QYNSNC Trigger: ACAATTACTATTGTACTGGCATTCAGAGTCACAGCC...CCAAATGAATTTGATATCTACAGACCATTTCACCCCCAAATGAAACCTTCTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR CCA 90 bp | TATATGGTGGGTTATGTTGATGGATTTTCATATACTGAACCATCCATGCATCCCAACAGGTCCAATGTCTaGACAAAGTTTTTAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YMVGYVDGFSYTEPSMHPNRSNV*TKFLKP Trigger: TGGCTTTAAAAACTTTGTCCAGACATTGGACCTGTT...GGGATGCATGGATGGTTCAGTATATGAAAATCCATCAACATAACCCACCATATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR TCA 90 bp | AGAAGAAGGTTTCATTTGGGGGTGAAATGGTCTGTAGATATCAAATTCATTTGGTTCTTTCTGATCATTTaGAGAGAATTTCTGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRRFHLGVKWSVDIKFIWFFLII*REFLSG Trigger: GCCAGACAGAAATTCTCTTCAAATGATCAGAAAGAA...CCAAATGAATTTGATATCTACAGACCATTTCACCCCCAAATGAAACCTTCTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR CCA 90 bp | TATATGGTGGGTTATGTTGATGGATTTTCATATACTGAACCATCCATGCATCCCAAGTCTAAGTCCCTGTaGAAAATTCCAAACATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YMVGYVDGFSYTEPSMHPKSKSL*KIPNIE Trigger: TTCTATGTTTGGAATTTTCCACAGGGACTTAGACTT...GGGATGCATGGATGGTTCAGTATATGAAAATCCATCAACATAACCCACCATATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS GCA 90 bp | AACACAGTGGGAACAGCCACAGTGAATGCAACTCCAAACGTGACTTaGTGTAGGACACAGGTGACTGAGTTTGGATGGCCAATGAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: NTVGTATVNATPNVT*CRTQVTEFGWPMKS Trigger: GCTCTTCATTGGCCATCCAAACTCAGTCACCTGTGTCCTACAGCAAGTCACGTTTGGAGTTGCATTCACTGTGGCTGTTCCCACTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS CCA 90 bp | AAAACAGCAGGCTGGCATTCCATTCCTCCTGAATTTTCTAAATCCTaGACCACAATCAGCACTGCACACAGAGGTCAGCATCTGTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: KTAGWHSIPPEFSKS*TTISTAHRGQHLCT Trigger: AGTACACAGATGCTGACCTCTGTGTGCAGTGCTGATTGTGGTCCAGGATTTAGAAAATTCAGGAGGAATGGAATGCCAGCCTGCTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS TCA 90 bp | TCATCATTGTCTGAGATGGCCAACCCTACCCAGTTCCAACTGAAATaGATTATGAAGGAGACCATGGCAAGGGCTAGAGATGTATCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSLSEMANPTQFQLK*IMKETMARARDVSS Trigger: TGAGGATACATCTCTAGCCCTTGCCATGGTCTCCTTCATAATTCATTTCAGTTGGAACTGGGTAGGGTTGGCCATCTCAGACAATGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR CAA 90 bp | AAACCAATACCCCTTGGAAACATTAGAAGCAAGTTCTTCCACAACAAACCACGGGTGAGAGTGCGGTTATaGGCCTTCACTATGGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: KPIPLGNIRSKFFHNKPRVRVRL*AFTMGV Trigger: TACTCCCATAGTGAAGGCCAATAACCGCACTCTCAC...CCGTGGTTTGTTGTGGAAGAACTTGCTTCTAATGTTTCCAAGGGGTATTGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS TCA 90 bp | AAAATAGGACTGAAATACTCTTTCTCCACAGGCCATTGTACTGCTTaGATAAAGAGGGCACAACCTGATCCCAGGTTTCCATCCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KIGLKYSFSTGHCTA*IKRAQPDPRFPSLS Trigger: AGACAAGGATGGAAACCTGGGATCAGGTTGTGCCCTCTTTATTCAAGCAGTACAATGGCCTGTGGAGAAAGAGTATTTCAGTCCTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS TCA 90 bp | TTTCTCCACAGGCCATTGTACTGCTTGAATAAAGAGGGCACAACCTaGTCCCAGGTTTCCATCCTTGTCTTTATTCTGTTTTATTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLHRPLYCLNKEGTT*SQVSILVFILFYSP Trigger: TGGAGAATAAAACAGAATAAAGACAAGGATGGAAACCTGGGATCAGGTTGTGCCCTCTTTATTCAAGCAGTACAATGGCCTGTGGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS GCA 90 bp | GTCAGGTCGCAGATTATCAAATTTTTGAAAAGTCAGCTCATGGAGTaGATGGGCAACAGCATATACAGCATTGTATATGGCATAACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VRSQIIKFLKSQLME*MGNSIYSIVYGITP Trigger: GGGAGTTATGCCATATACAATGCTGTATATGCTGTTGCCCATGCACTCCATGAGCTGACTTTTCAAAAATTTGATAATCTGCGACCTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS GCA 90 bp | AACAAGAAAGTACTTCATCATTCTTTGAGGGGCTGTGACTCTGAATaGCAGTACAATAGTAATTGTTTTGGCCAACACAGTGGGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: NKKVLHHSLRGCDSE*QYNSNCFGQHSGNS Trigger: GCTGTTCCCACTGTGTTGGCCAAAACAATTACTATTGTACTGGCATTCAGAGTCACAGCCCCTCAAAGAATGATGAAGTACTTTCTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR CAA 90 bp | TCTCTGTTTAGTTTCTATTTCAATGACTGGTCCCTTGGTAAAAGTGGGTTGTTGAGGCCATTGTACTGCTaGAATAAAGAGGGCACAACC | + |
|
Preference number: 5 (lower is better) Translates to: SLFSFYFNDWSLGKSGLLRPLYC*NKEGTT Trigger: GGTTGTGCCCTCTTTATTCAAGCAGTACAATGGCCT...CAACAACCCACTTTTACCAAGGGACCAGTCATTGAAATAGAAACTAAACAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR CAA 90 bp | TCTCTGTTTAGTTTCTATTTCAATGACTGGTCCCTTGGTAAAAGTGGGTTGTTGTGGATACCTTCATCATaGTCTGAGATGGCCAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: SLFSFYFNDWSLGKSGLLWIPSS*SEMANP Trigger: AGGGTTGGCCATCTCAGACAATGATGAAGGTATCCA...CAACAACCCACTTTTACCAAGGGACCAGTCATTGAAATAGAAACTAAACAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR CAA 90 bp | GTGCTGAGAAGAAGGTTTCATTTGGGGGTGAAATGGTCTGTAGATATCAAATTCTTTCTCCACAGGCCATaGTACTGCTTGAATAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLRRRFHLGVKWSVDIKFFLHRP*YCLNKE Trigger: CTCTTTATTCAAGCAGTACAATGGCCTGTGGAGAAA...GAATTTGATATCTACAGACCATTTCACCCCCAAATGAAACCTTCTTCTCAGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR CAA 90 bp | AAACCAATACCCCTTGGAAACATTAGAAGCAAGTTCTTCCACAACAAACCACGGACAATAGTAATTGTTTaGGCCAACACAGTGGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: KPIPLGNIRSKFFHNKPRTIVIV*ANTVGT Trigger: TGTTCCCACTGTGTTGGCCAAAACAATTACTATTGT...CCGTGGTTTGTTGTGGAAGAACTTGCTTCTAATGTTTCCAAGGGGTATTGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS-3UTR CAA 90 bp | TCTCTGTTTAGTTTCTATTTCAATGACTGGTCCCTTGGTAAAAGTGGGTTGTTGGTTGCAGGCATATTTTaGTCCTTTCACATTGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLFSFYFNDWSLGKSGLLVAGIF*SFHIVR Trigger: CCTGACAATGTGAAAGGACAAAAATATGCCTGCAAC...CAACAACCCACTTTTACCAAGGGACCAGTCATTGAAATAGAAACTAAACAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS CCA 90 bp | AGCTTTACCAGATATTCATCTGAGAATTTTAACAGGTCCAATGTCTaGACAAAGTTTTTAAAGCCAGAAATCTCACCATGGTGGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SFTRYSSENFNRSNV*TKFLKPEISPWWCP Trigger: TGGACACCACCATGGTGAGATTTCTGGCTTTAAAAACTTTGTCCAGACATTGGACCTGTTAAAATTCTCAGATGAATATCTGGTAAAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS CCA 90 bp | TCCAATGTCTGGACAAAGTTTTTAAAGCCAGAAATCTCACCATGGTaGTGTCCAAAAGCAAATGTCCCATACAAGTTATTAAATGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SNVWTKFLKPEISPW*CPKANVPYKLLNVK Trigger: CTTCACATTTAATAACTTGTATGGGACATTTGCTTTTGGACACCACCATGGTGAGATTTCTGGCTTTAAAAACTTTGTCCAGACATTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS GCA 72 bp | GGAACAGCCACAGTGAATGCAACTCCAAACGTGACTTaGTGTAGGACACAGGTGACTGAGTTTGGATGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GTATVNATPNVT*CRTQVTEFGWP Trigger: TGGCCATCCAAACTCAGTCACCTGTGTCCTACAGCAAGTCACGTTTGGAGTTGCATTCACTGTGGCTGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS CCA 72 bp | GGCTGGCATTCCATTCCTCCTGAATTTTCTAAATCCTaGACCACAATCAGCACTGCACACAGAGGTCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GWHSIPPEFSKS*TTISTAHRGQH Trigger: ATGCTGACCTCTGTGTGCAGTGCTGATTGTGGTCCAGGATTTAGAAAATTCAGGAGGAATGGAATGCCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS CAA 72 bp | CACTGCACACAGAGGTCAGCATCTGTGTACTTCCTCTaGCCCACTCTAGCATATCTTCAGACAAATGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: HCTQRSASVYFL*PTLAYLQTNVA Trigger: AGCTACATTTGTCTGAAGATATGCTAGAGTGGGCAAGAGGAAGTACACAGATGCTGACCTCTGTGTGCAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS TCA 72 bp | CTGAAATACTCTTTCTCCACAGGCCATTGTACTGCTTaGATAAAGAGGGCACAACCTGATCCCAGGTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LKYSFSTGHCTA*IKRAQPDPRFP Trigger: TGGAAACCTGGGATCAGGTTGTGCCCTCTTTATTCAAGCAGTACAATGGCCTGTGGAGAAAGAGTATTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS CCA 72 bp | TTCATATTCACTCTGTCCCCAACAGGATTAGTGAAGTaGATCTTTCTCAGGAAGGAACCCAGCTTGTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FIFTLSPTGLVK*IFLRKEPSLLQ Trigger: CTGCAACAAGCTGGGTTCCTTCCTGAGAAAGATCCACTTCACTAATCCTGTTGGGGACAGAGTGAATATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS CAA 72 bp | GCTGTGACTCTGAATGCCAGTACAATAGTAATTGTTTaGGCCAACACAGTGGGAACAGCCACAGTGAATGCA | + |
|
Preference number: 6 (lower is better) Translates to: AVTLNASTIVIV*ANTVGTATVNA Trigger: TGCATTCACTGTGGCTGTTCCCACTGTGTTGGCCAAAACAATTACTATTGTACTGGCATTCAGAGTCACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS CAA 72 bp | AGGAGCAGCTCCCAGCCAGACTGCACAGACAATAACTaGGATGAGAGTACAGATGGGAATGATATAGATAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSSSQPDCTDNN*DESTDGNDIDR Trigger: TCTATCTATATCATTCCCATCTGTACTCTCATCCAAGTTATTGTCTGTGCAGTCTGGCTGGGAGCTGCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS CAA 72 bp | CTTCTCAAATGGGAAAGAAATTGGATACCTTCATCATaGTCTGAGATGGCCAACCCTACCCAGTTCCAACTG | + |
|
Preference number: 6 (lower is better) Translates to: LLKWERNWIPSS*SEMANPTQFQL Trigger: CAGTTGGAACTGGGTAGGGTTGGCCATCTCAGACAATGATGAAGGTATCCAATTTCTTTCCCATTTGAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS CAA 72 bp | GTGAAGTGGATCTTTCTCAGGAAGGAACCCAGCTTGTaGCAGGCATATTTTTGTCCTTTCACATTGTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VKWIFLRKEPSL*QAYFCPFTLSG Trigger: ACCTGACAATGTGAAAGGACAAAAATATGCCTGCAACAAGCTGGGTTCCTTCCTGAGAAAGATCCACTTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS TCA 72 bp | AGGCCATTGTACTGCTTGAATAAAGAGGGCACAACCTaGTCCCAGGTTTCCATCCTTGTCTTTATTCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: RPLYCLNKEGTT*SQVSILVFILF Trigger: AAACAGAATAAAGACAAGGATGGAAACCTGGGATCAGGTTGTGCCCTCTTTATTCAAGCAGTACAATGGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS TCA 72 bp | CAAATGGGAAAGAAATTGGATACCTTCATCATTGTCTaGGATGGCCAACCCTACCCAGTTCCAACTGAAATG | + |
|
Preference number: 6 (lower is better) Translates to: QMGKKLDTFIIV*DGQPYPVPTEM Trigger: CATTTCAGTTGGAACTGGGTAGGGTTGGCCATCTCAGACAATGATGAAGGTATCCAATTTCTTTCCCATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS TCA 72 bp | CCTTTCACATTGTCAGGTCGCAGATTATCAAATTTTTaGAAAGTCAGCTCATGGAGTGCATGGGCAACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PFTLSGRRLSNF*KVSSWSAWATA Trigger: TGCTGTTGCCCATGCACTCCATGAGCTGACTTTTCAAAAATTTGATAATCTGCGACCTGACAATGTGAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS TCA 72 bp | GATGCCCCTGAAACAAGAAAGTACTTCATCATTCTTTaGGGGGCTGTGACTCTGAATGCCAGTACAATAGTA | + |
|
Preference number: 6 (lower is better) Translates to: DAPETRKYFIIL*GAVTLNASTIV Trigger: TACTATTGTACTGGCATTCAGAGTCACAGCCCCTCAAAGAATGATGAAGTACTTTCTTGTTTCAGGGGCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS CAA 72 bp | TCTCAGGAAGGAACCCAGCTTGTTGCAGGCATATTTTaGTCCTTTCACATTGTCAGGTCGCAGATTATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SQEGTQLVAGIF*SFHIVRSQIIK Trigger: TTTGATAATCTGCGACCTGACAATGTGAAAGGACAAAAATATGCCTGCAACAAGCTGGGTTCCTTCCTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS TCA 72 bp | GAGAGTACAGATGGGAATGATATAGATAGATGCCCCTaGAACAAGAAAGTACTTCATCATTCTTTGAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ESTDGNDIDRCP*NKKVLHHSLRG Trigger: GCCCCTCAAAGAATGATGAAGTACTTTCTTGTTTCAGGGGCATCTATCTATATCATTCCCATCTGTACTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS GCA 72 bp | GTACTTCATCATTCTTTGAGGGGCTGTGACTCTGAATaGCAGTACAATAGTAATTGTTTTGGCCAACACAGT | + |
|
Preference number: 6 (lower is better) Translates to: VLHHSLRGCDSE*QYNSNCFGQHS Trigger: ACTGTGTTGGCCAAAACAATTACTATTGTACTGGCATTCAGAGTCACAGCCCCTCAAAGAATGATGAAGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS CAA 72 bp | TTAGTGAAGTGGATCTTTCTCAGGAAGGAACCCAGCTaGTTGCAGGCATATTTTTGTCCTTTCACATTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LVKWIFLRKEPS*LQAYFCPFTLS Trigger: TGACAATGTGAAAGGACAAAAATATGCCTGCAACAAGCTGGGTTCCTTCCTGAGAAAGATCCACTTCACTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS CAA 90 bp | GTGGATCTTTCTCAGGAAGGAACCCAGCTTGTTGCAGGCATATTTTaGTCCTTTCACATTGTCAGGTCGCAGATTATCAAATTTTTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: VDLSQEGTQLVAGIF*SFHIVRSQIIKFLK Trigger: TTTCAAAAATTTGATAATCTGCGACCTGACAATGTGAAAGGACAAAAATATGCCTGCAACAAGCTGGGTTCCTTCCTGAGAAAGATCCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS CAA 90 bp | TATAACAGCTCTTTGAATGCAGTTATTCTGCTCTGTATTAGCATATaGGTCTTCTGGACACGGGACACACAACTCCACATTTGTCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: YNSSLNAVILLCISI*VFWTRDTQLHICLI Trigger: AATGAGACAAATGTGGAGTTGTGTGTCCCGTGTCCAGAAGACCAATATGCTAATACAGAGCAGAATAACTGCATTCAAAGAGCTGTTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS CAA 90 bp | TGCCATCCCCAAGGGGTCTTTATAAGTGAGAAATATAACAGCTCTTaGAATGCAGTTATTCTGCTCTGTATTAGCATATTGGTCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CHPQGVFISEKYNSS*NAVILLCISILVFW Trigger: CCAGAAGACCAATATGCTAATACAGAGCAGAATAACTGCATTCAAAGAGCTGTTATATTTCTCACTTATAAAGACCCCTTGGGGATGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS CCA 72 bp | GTCTGGACAAAGTTTTTAAAGCCAGAAATCTCACCATaGTGGTGTCCAAAAGCAAATGTCCCATACAAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: VWTKFLKPEISP*WCPKANVPYKL Trigger: TAACTTGTATGGGACATTTGCTTTTGGACACCACCATGGTGAGATTTCTGGCTTTAAAAACTTTGTCCAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS CCA 72 bp | AGATATTCATCTGAGAATTTTAACAGGTCCAATGTCTaGACAAAGTTTTTAAAGCCAGAAATCTCACCATGG | + |
|
Preference number: 6 (lower is better) Translates to: RYSSENFNRSNV*TKFLKPEISPW Trigger: CCATGGTGAGATTTCTGGCTTTAAAAACTTTGTCCAGACATTGGACCTGTTAAAATTCTCAGATGAATATCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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| CDS CAA 72 bp | CAAGGGGTCTTTATAAGTGAGAAATATAACAGCTCTTaGAATGCAGTTATTCTGCTCTGTATTAGCATATTG | + |
|
Preference number: 6 (lower is better) Translates to: QGVFISEKYNSS*NAVILLCISIL Trigger: CAATATGCTAATACAGAGCAGAATAACTGCATTCAAAGAGCTGTTATATTTCTCACTTATAAAGACCCCTTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175853.3 |
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