Pregenerated sensors for VMN2R129 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057021Ensembl transcript IDs: ENSMUST00000074107.13, ENSMUST00000096792.8, ENSMUST00000189559.7
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGAAAAATACTCCAAATGTGGTCTGCTGCAAGATGCAGGTGACCTaGTCGGGAGGTCCAATGAAGAGCAGGGAGCAGAGAAAGCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: VKNTPNVVCCKMQVT*SGGPMKSREQRKQK Trigger: CTTCTGCTTTCTCTGCTCCCTGCTCTTCATTGGACCTCCCGACCAGGTCACCTGCATCTTGCAGCAGACCACATTTGGAGTATTTTTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR TCA 90 bp | AGCCAAGGAGCCCAAGTATCCCAGGACGACGTGGAAGGCAATGACTaGGCCTTTATTGCAAAGAATGACAATCTTCCCATGCTCAGATTG | + |
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Preference number: 1 (lower is better) Translates to: SQGAQVSQDDVEGND*AFIAKNDNLPMLRL Trigger: CAATCTGAGCATGGGAAGATTGTCATTCTTTGCAATAAAGGCTCAGTCATTGCCTTCCACGTCGTCCTGGGATACTTGGGCTCCTTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR TCA 90 bp | CACAATCAAAGCAGCAGTCTGCTGTTTCTTTTTGATAAATTTTCCTaGATCCAGCAGTACATGCCACACTACACACGGAGGAGGGAACCT | + |
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Preference number: 1 (lower is better) Translates to: HNQSSSLLFLFDKFS*IQQYMPHYTRRREP Trigger: AGGTTCCCTCCTCCGTGTGTAGTGTGGCATGTACTGCTGGATTCAGGAAAATTTATCAAAAAGAAACAGCAGACTGCTGCTTTGATTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189559.7 |
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| 3UTR-3UTR TCA 90 bp | GACAATCTTCCCATGCTCAGATTGTATATCTCTGTCAATAAAGGGAGGAGATGTCCTCCACAACCACCATaGCCCTCCCCCTGGTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: DNLPMLRLYISVNKGRRCPPQPP*PSPWCC Trigger: ACAGCACCAGGGGGAGGGTCATGGTGGTTGTGGAGG...ACATCTCCTCCCTTTATTGACAGAGATATACAATCTGAGCATGGGAAGATTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR-3UTR CCA 90 bp | GGAATGACCAACTTAGGTGCCCCTGTCATCATCATCCCTCTCATCCTTCTTCCTGCTCTTGAGAGGCAGTaGGTTTGCTCTATGTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: GMTNLGAPVIIIPLILLPALERQ*VCSMLA Trigger: TGCCAACATAGAGCAAACCCACTGCCTCTCAAGAGC...AGGAAGAAGGATGAGAGGGATGATGATGACAGGGGCACCTAAGTTGGTCATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR CAA 90 bp | AATAAAGGGAGGAGATGTGACCAACCAGATTCCACAGAGAACAAGTaGGATCAGGGTACAAATGGGAATGACCAACTTAGGTGCCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: NKGRRCDQPDSTENK*DQGTNGNDQLRCPC Trigger: ACAGGGGCACCTAAGTTGGTCATTCCCATTTGTACCCTGATCCAACTTGTTCTCTGTGGAATCTGGTTGGTCACATCTCCTCCCTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR-3UTR CCA 90 bp | CTCATCCTTCTTCCTGGAGTAGTGAGCTTGAAAGCCATGACCACAGTTATTGTTGCTCTTGAGAGGCAGTaGGTTTGCTCTATGTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: LILLPGVVSLKAMTTVIVALERQ*VCSMLA Trigger: TGCCAACATAGAGCAAACCCACTGCCTCTCAAGAGC...AACAATAACTGTGGTCATGGCTTTCAAGCTCACTACTCCAGGAAGAAGGATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR-3UTR GCA 90 bp | ACCACAGATCAAAATGTTGGTAGCCATTCCTCAATTGAGAATCCCAGTTCTCAACCAAATGTGGTCTGCTaGAAGATGCAGGTGACCTGG | + |
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Preference number: 2 (lower is better) Translates to: TTDQNVGSHSSIENPSSQPNVVC*KMQVTW Trigger: CCAGGTCACCTGCATCTTGCAGCAGACCACATTTGG...TTGAGAACTGGGATTCTCAATTGAGGAATGGCTACCAACATTTTGATCTGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR-3UTR TCA 90 bp | GGGCCACAGCATAAACAGCATTATATAAACTGTAACCTTCATCACTCATCGCCAACCCTGGTCATCATCTaGGATGACCATTCCTATCCA | + |
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Preference number: 2 (lower is better) Translates to: GPQHKQHYINCNLHHSSPTLVII*DDHSYP Trigger: TGGATAGGAATGGTCATCTCAGATGATGACCAGGGT...TGGCGATGAGTGATGAAGGTTACAGTTTATATAATGCTGTTTATGCTGTGGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189559.7 |
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| 3UTR-3UTR GCA 90 bp | TCAGATTGTATATCTCTGTCAATAAAGGGAGGAGATGTGACCAACCAGATTCCAACTCCAAATGTGGTCTaGTGCAAGATGCAGGTGACC | + |
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Preference number: 2 (lower is better) Translates to: SDCISLSIKGGDVTNQIPTPNVV*CKMQVT Trigger: GGTCACCTGCATCTTGCAGCAGACCACATTTGGAGT...TGGAATCTGGTTGGTCACATCTCCTCCCTTTATTGACAGAGATATACAATCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR-3UTR CCA 90 bp | GTAGAAACAGACACAGTGAAAAATACTCCAAATGTGGTCTGCTGCAAGATGCAGAAGGAGACCATGCCATaGGACAAATGTGTGTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: VETDTVKNTPNVVCCKMQKETMP*DKCVSL Trigger: CAAGGACACACATTTGTCCCATGGCATGGTCTCCTT...CTGCATCTTGCAGCAGACCACATTTGGAGTATTTTTCACTGTGTCTGTTTCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189559.7 |
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| 3UTR-3UTR TCA 90 bp | ACTGAGCCTTTATTGCAAAGAATGACAATCTTCCCATGCTCAGATTGTATATCTCCCATTGTGAGGTTGTaGTCCAGATTCTCCGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: TEPLLQRMTIFPCSDCISPIVRL*SRFSEH Trigger: GTGCTCGGAGAATCTGGATCACAACCTCACAATGGG...AGATATACAATCTGAGCATGGGAAGATTGTCATTCTTTGCAATAAAGGCTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189559.7 |
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| 3UTR-3UTR GCA 90 bp | ATGACTGAGCCTTTATTGCAAAGAATGACAATCTTCCCATGCTCAGATTGTATACCAAATGTGGTCTGCTaGAAGATGCAGGTGACCTGG | + |
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Preference number: 2 (lower is better) Translates to: MTEPLLQRMTIFPCSDCIPNVVC*KMQVTW Trigger: CCAGGTCACCTGCATCTTGCAGCAGACCACATTTGG...TATACAATCTGAGCATGGGAAGATTGTCATTCTTTGCAATAAAGGCTCAGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR-3UTR GCA 90 bp | GGAATGACCAACTTAGGTGCCCCTGTCATCATCATCCCTCTCATCCTTCTTCCTCTTGTCATGTATATCTaGATGTTTTCTGGGATCATA | + |
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Preference number: 2 (lower is better) Translates to: GMTNLGAPVIIIPLILLPLVMYI*MFSGII Trigger: TATGATCCCAGAAAACATGCAGATATACATGACAAG...AGGAAGAAGGATGAGAGGGATGATGATGACAGGGGCACCTAAGTTGGTCATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189559.7 |
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| 3UTR-3UTR CCA 90 bp | CTCATCCTTCTTCCTGGAGTAGTGAGCTTGAAAGCCATGACCACAGTTATTGTTGGGTTTGCTCTATGTTaGCATACTTATCATCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: LILLPGVVSLKAMTTVIVGFALC*HTYHLD Trigger: GTCCAGATGATAAGTATGCCAACATAGAGCAAACCC...AACAATAACTGTGGTCATGGCTTTCAAGCTCACTACTCCAGGAAGAAGGATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR-3UTR TCA 90 bp | GTAGAAACAGACACAGTGAAAAATACTCCAAATGTGGTCTGCTGCAAGATGCAGCAAGTCCATCTAAAGTaGAACATCAAGGAGACCATG | + |
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Preference number: 2 (lower is better) Translates to: VETDTVKNTPNVVCCKMQQVHLK*NIKETM Trigger: CATGGTCTCCTTGATGTTTCACTTTAGATGGACTTG...CTGCATCTTGCAGCAGACCACATTTGGAGTATTTTTCACTGTGTCTGTTTCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189559.7 |
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| 3UTR-3UTR GCA 90 bp | ATGACTGAGCCTTTATTGCAAAGAATGACAATCTTCCCATGCTCAGATTGTATAACTCCAAATGTGGTCTaGTGCAAGATGCAGGTGACC | + |
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Preference number: 2 (lower is better) Translates to: MTEPLLQRMTIFPCSDCITPNVV*CKMQVT Trigger: GGTCACCTGCATCTTGCAGCAGACCACATTTGGAGT...TATACAATCTGAGCATGGGAAGATTGTCATTCTTTGCAATAAAGGCTCAGTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR-3UTR GCA 90 bp | TCAGATTGTATATCTCTGTCAATAAAGGGAGGAGATGTGACCAACCAGATTCCAACATCAAGGAGACCATaGCATGGGACAAATGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: SDCISLSIKGGDVTNQIPTSRRP*HGTNVC Trigger: ACACACATTTGTCCCATGGCATGGTCTCCTTGATGT...TGGAATCTGGTTGGTCACATCTCCTCCCTTTATTGACAGAGATATACAATCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189559.7 |
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| 3UTR-3UTR CCA 90 bp | ATCTTCCCATGCTCAGATTGTATATCTCTGTCAATAAAGGGAGGAGATGTGACCGGGTTTGCTCTATGTTaGCATACTTATCATCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: IFPCSDCISLSIKGGDVTGFALC*HTYHLD Trigger: GTCCAGATGATAAGTATGCCAACATAGAGCAAACCC...GGTCACATCTCCTCCCTTTATTGACAGAGATATACAATCTGAGCATGGGAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR-3UTR CCA 90 bp | GACAATCTTCCCATGCTCAGATTGTATATCTCTGTCAATAAAGGGAGGAGATGTCCACAGAGAACAAGTTaGATCAGGGTACAAATGGGA | + |
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Preference number: 2 (lower is better) Translates to: DNLPMLRLYISVNKGRRCPQRTS*IRVQMG Trigger: TCCCATTTGTACCCTGATCCAACTTGTTCTCTGTGG...ACATCTCCTCCCTTTATTGACAGAGATATACAATCTGAGCATGGGAAGATTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR-3UTR TCA 90 bp | TTCTGGGCACTGAACACAATCAAAGCAGCAGTCTGCTGTTTCTTTTTGATAAATAGAACACCAGCATGCTaGAAGTTAGGAACTTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: FWALNTIKAAVCCFFLINRTPAC*KLGTWL Trigger: AAGCCAAGTTCCTAACTTTCAGCATGCTGGTGTTCT...ATTTATCAAAAAGAAACAGCAGACTGCTGCTTTGATTGTGTTCAGTGCCCAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189559.7 |
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| 3UTR-3UTR TCA 90 bp | TCAATTGAGAATCCCAGTTCTCAACATATTCATGTTTGCTGTCCAGTTTGTAAGGGTCATCATCTGAGATaGCCATTCCTATCCAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: SIENPSSQHIHVCCPVCKGHHLR*PFLSKS Trigger: GGACTTGGATAGGAATGGTCATCTCAGATGATGACC...CTTACAAACTGGACAGCAAACATGAATATGTTGAGAACTGGGATTCTCAATTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189559.7 |
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| 3UTR-3UTR GCA 90 bp | TCAGATTGTATATCTCTGTCAATAAAGGGAGGAGATGTGACCAACCAGATTCCAGCTAAACAGATCCCATaGCTTTGGCTTTCTTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: SDCISLSIKGGDVTNQIPAKQIP*LWLSSL Trigger: AAGAGAAGAAAGCCAAAGGCATGGGATCTGTTTAGC...TGGAATCTGGTTGGTCACATCTCCTCCCTTTATTGACAGAGATATACAATCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189559.7 |
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| 3UTR CAA 90 bp | CATGAACTTGGAAGTAAGAACTCCATGAAAGCAAGTGGAATAATGTaGATTACTGGCTTCATGTCCATTGTGTATGCAGTACCCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: HELGSKNSMKASGIM*ITGFMSIVYAVPFL Trigger: AAGAAAGGGTACTGCATACACAATGGACATGAAGCCAGTAATCAACATTATTCCACTTGCTTTCATGGAGTTCTTACTTCCAAGTTCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 ENSMUST00000189559.7 |
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| 3UTR-3UTR TCA 90 bp | TTCTGGGCACTGAACACAATCAAAGCAGCAGTCTGCTGTTTCTTTTTGATAAATAAATCTGAGAGAAACTaGATACCCTGGTCATCATCT | + |
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Preference number: 2 (lower is better) Translates to: FWALNTIKAAVCCFFLINKSERN*IPWSSS Trigger: AGATGATGACCAGGGTATTCAGTTTCTCTCAGATTT...ATTTATCAAAAAGAAACAGCAGACTGCTGCTTTGATTGTGTTCAGTGCCCAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189559.7 |
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| 3UTR-3UTR CCA 90 bp | GTAGAAACAGACACAGTGAAAAATACTCCAAATGTGGTCTGCTGCAAGATGCAGATGAGAAATATCTACTaGGTATTTGGCAGTGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: VETDTVKNTPNVVCCKMQMRNIY*VFGSVH Trigger: ATGAACACTGCCAAATACCCAGTAGATATTTCTCAT...CTGCATCTTGCAGCAGACCACATTTGGAGTATTTTTCACTGTGTCTGTTTCTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189559.7 |
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| 3UTR-3UTR CCA 90 bp | ACTGAGCCTTTATTGCAAAGAATGACAATCTTCCCATGCTCAGATTGTATATCTCAGATCCCATGCCTTTaGCTTTCTTCTCTTAAATCT | + |
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Preference number: 2 (lower is better) Translates to: TEPLLQRMTIFPCSDCISQIPCL*LSSLKS Trigger: AGATTTAAGAGAAGAAAGCCAAAGGCATGGGATCTG...AGATATACAATCTGAGCATGGGAAGATTGTCATTCTTTGCAATAAAGGCTCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189559.7 |
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| 3UTR-3UTR CCA 90 bp | ATGACTGAGCCTTTATTGCAAAGAATGACAATCTTCCCATGCTCAGATTGTATATATCTACTGGGTATTTaGCAGTGTTCATTGTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: MTEPLLQRMTIFPCSDCIYLLGI*QCSLFA Trigger: TGCAAACAATGAACACTGCCAAATACCCAGTAGATA...TATACAATCTGAGCATGGGAAGATTGTCATTCTTTGCAATAAAGGCTCAGTCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189559.7 |
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| 3UTR CCA 72 bp | ACTCCAAATGTGGTCTGCTGCAAGATGCAGGTGACCTaGTCGGGAGGTCCAATGAAGAGCAGGGAGCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: TPNVVCCKMQVT*SGGPMKSREQR Trigger: TCTCTGCTCCCTGCTCTTCATTGGACCTCCCGACCAGGTCACCTGCATCTTGCAGCAGACCACATTTGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR GCA 72 bp | ACAGACACAGTGAAAAATACTCCAAATGTGGTCTGCTaGAAGATGCAGGTGACCTGGTCGGGAGGTCCAATG | + |
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Preference number: 3 (lower is better) Translates to: TDTVKNTPNVVC*KMQVTWSGGPM Trigger: CATTGGACCTCCCGACCAGGTCACCTGCATCTTGCAGCAGACCACATTTGGAGTATTTTTCACTGTGTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR-3UTR CAA 90 bp | GGAATGACCAACTTAGGTGCCCCTGTCATCATCATCCCTCTCATCCTTCTTCCTTCCACAGAGAACAAGTaGGATCAGGGTACAAATGGG | + |
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Preference number: 3 (lower is better) Translates to: GMTNLGAPVIIIPLILLPSTENK*DQGTNG Trigger: CCCATTTGTACCCTGATCCAACTTGTTCTCTGTGGA...AGGAAGAAGGATGAGAGGGATGATGATGACAGGGGCACCTAAGTTGGTCATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR TCA 72 bp | GCCCAAGTATCCCAGGACGACGTGGAAGGCAATGACTaGGCCTTTATTGCAAAGAATGACAATCTTCCCATG | + |
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Preference number: 3 (lower is better) Translates to: AQVSQDDVEGND*AFIAKNDNLPM Trigger: CATGGGAAGATTGTCATTCTTTGCAATAAAGGCTCAGTCATTGCCTTCCACGTCGTCCTGGGATACTTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR GCA 72 bp | TTGGATCAGGGTACAAATGGGAATGACCAACTTAGGTaGCCCTGTCATCATCATCCCTCTCATCCTTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: LDQGTNGNDQLR*PCHHHPSHPSS Trigger: GGAAGAAGGATGAGAGGGATGATGATGACAGGGGCACCTAAGTTGGTCATTCCCATTTGTACCCTGATCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR-3UTR CAA 90 bp | ATGACCAACTTAGGTGCCCCTGTCATCATCATCCCTCTCATCCTTCTTCCTGGAACAATGGGAGTATCGTaGTGTTTCACAAATGTGACG | + |
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Preference number: 3 (lower is better) Translates to: MTNLGAPVIIIPLILLPGTMGVS*CFTNVT Trigger: CGTCACATTTGTGAAACACAACGATACTCCCATTGT...TCCAGGAAGAAGGATGAGAGGGATGATGATGACAGGGGCACCTAAGTTGGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR CCA 72 bp | GGAGATGTGACCAACCAGATTCCACAGAGAACAAGTTaGATCAGGGTACAAATGGGAATGACCAACTTAGGT | + |
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Preference number: 3 (lower is better) Translates to: GDVTNQIPQRTS*IRVQMGMTNLG Trigger: ACCTAAGTTGGTCATTCCCATTTGTACCCTGATCCAACTTGTTCTCTGTGGAATCTGGTTGGTCACATCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR CCA 72 bp | CTGTTCCATATCTGTTTCGTTGGAAATCTCATTTTCTaGGCACTGAACACAATCAAAGCAGCAGTCTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: LFHICFVGNLIF*ALNTIKAAVCC Trigger: ACAGCAGACTGCTGCTTTGATTGTGTTCAGTGCCCAGAAAATGAGATTTCCAACGAAACAGATATGGAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189559.7 |
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| 3UTR-3UTR CAA 90 bp | AATGCGGTTATTGGCCTTCACAATGGGAGTATCGTTGTGTTTCACAAATGTGACACAATGGGAGTATCGTaGTGTTTCACAAATGTGACG | + |
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Preference number: 3 (lower is better) Translates to: NAVIGLHNGSIVVFHKCDTMGVS*CFTNVT Trigger: CGTCACATTTGTGAAACACAACGATACTCCCATTGT...GTCACATTTGTGAAACACAACGATACTCCCATTGTGAAGGCCAATAACCGCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR TCA 72 bp | TGCCTTTGGCTTTCTTCTCTTAAATCTGAGAGAAACTaGATACCCTGGTCATCATCTGAGATGACCATTCCT | + |
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Preference number: 3 (lower is better) Translates to: CLWLSSLKSERN*IPWSSSEMTIP Trigger: AGGAATGGTCATCTCAGATGATGACCAGGGTATTCAGTTTCTCTCAGATTTAAGAGAAGAAAGCCAAAGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189559.7 |
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| 3UTR-3UTR CAA 90 bp | ACTGAGCCTTTATTGCAAAGAATGACAATCTTCCCATGCTCAGATTGTATATCTGCAAGTGGAATAATGTaGATTACTGGCTTCATGTCC | + |
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Preference number: 3 (lower is better) Translates to: TEPLLQRMTIFPCSDCISASGIM*ITGFMS Trigger: GGACATGAAGCCAGTAATCAACATTATTCCACTTGC...AGATATACAATCTGAGCATGGGAAGATTGTCATTCTTTGCAATAAAGGCTCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR GCA 72 bp | ACTGAGCCTTTATTGCAAAGAATGACAATCTTCCCATaGTCAGATTGTATATCTCTGTCAATAAAGGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: TEPLLQRMTIFP*SDCISLSIKGG Trigger: TCCTCCCTTTATTGACAGAGATATACAATCTGAGCATGGGAAGATTGTCATTCTTTGCAATAAAGGCTCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR GCA 72 bp | TCTGGGATCATATTAACAAAAGCTAAACAGATCCCATaGCTTTGGCTTTCTTCTCTTAAATCTGAGAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: SGIILTKAKQIP*LWLSSLKSERN Trigger: GTTTCTCTCAGATTTAAGAGAAGAAAGCCAAAGGCATGGGATCTGTTTAGCTTTTGTTAATATGATCCCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189559.7 |
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| CDS-3UTR TCA 90 bp | TATAACTCAAGGACAGCATGCCTAGAGGTGGCGCTGTTCACAGACAGTAGGGTAGGTCGGGAGGTCCAATaGAGAGCAGGGAGCAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: YNSRTACLEVALFTDSRVGREVQ*RAGSRE Trigger: TTCTCTGCTCCCTGCTCTTCATTGGACCTCCCGACC...TACCCTACTGTCTGTGAACAGCGCCACCTCTAGGCATGCTGTCCTTGAGTTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
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| CDS-3UTR TCA 90 bp | TATAACTCAAGGACAGCATGCCTAGAGGTGGCGCTGTTCACAGACAGTAGGGTAACCCTGGTCATCATCTaGGATGACCATTCCTATCCA | + |
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Preference number: 4 (lower is better) Translates to: YNSRTACLEVALFTDSRVTLVII*DDHSYP Trigger: TGGATAGGAATGGTCATCTCAGATGATGACCAGGGT...TACCCTACTGTCTGTGAACAGCGCCACCTCTAGGCATGCTGTCCTTGAGTTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
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| CDS-3UTR TCA 90 bp | TCAAGGCATGAACTTGGAAGTAAGAACTCCATGAAAGCAAGTGGAATAATGTTGCCTCCACAACCACCATaGCCCTCCCCCTGGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SRHELGSKNSMKASGIMLPPQPP*PSPWCC Trigger: ACAGCACCAGGGGGAGGGTCATGGTGGTTGTGGAGG...CAACATTATTCCACTTGCTTTCATGGAGTTCTTACTTCCAAGTTCATGCCTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
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| CDS-3UTR TCA 90 bp | ACCACAGATCAAAATGTTGGTAGCCATTCCTCAATTGAGAATCCCAGTTCTCAAACGGAGGAGGGAACCTaGGGTGATGTTCCTCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: TTDQNVGSHSSIENPSSQTEEGT*GDVPPL Trigger: CAAGGGAGGAACATCACCTCAGGTTCCCTCCTCCGT...TTGAGAACTGGGATTCTCAATTGAGGAATGGCTACCAACATTTTGATCTGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
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| CDS-3UTR TCA 90 bp | CTTTCTTATAACTCAAGGACAGCATGCCTAGAGGTGGCGCTGTTCACAGACAGTCGACGTGGAAGGCAATaGCTGAGCCTTTATTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSYNSRTACLEVALFTDSRRGRQ*LSLYCK Trigger: TTTGCAATAAAGGCTCAGTCATTGCCTTCCACGTCG...ACTGTCTGTGAACAGCGCCACCTCTAGGCATGCTGTCCTTGAGTTATAAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
||
| CDS-3UTR CCA 90 bp | TATAACTCAAGGACAGCATGCCTAGAGGTGGCGCTGTTCACAGACAGTAGGGTACCTCCAAAAGCAACTTaGTTCACTCCAACAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: YNSRTACLEVALFTDSRVPPKAT*FTPTAQ Trigger: TTGTGCTGTTGGAGTGAACCAAGTTGCTTTTGGAGG...TACCCTACTGTCTGTGAACAGCGCCACCTCTAGGCATGCTGTCCTTGAGTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 ENSMUST00000189559.7 |
||
| CDS-3UTR CCA 90 bp | TATAACTCAAGGACAGCATGCCTAGAGGTGGCGCTGTTCACAGACAGTAGGGTATCCAAAGAAAACCAGTaGCATCGAAGAGTGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: YNSRTACLEVALFTDSRVSKENQ*HRRVHC Trigger: GCAATGCACTCTTCGATGCCACTGGTTTTCTTTGGA...TACCCTACTGTCTGTGAACAGCGCCACCTCTAGGCATGCTGTCCTTGAGTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTTATAACTCAAGGACAGCATGCCTAGAGGTGGCGCTGTTCACAGACAGTCCTCCAAAAGCAACTTaGTTCACTCCAACAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LSYNSRTACLEVALFTDSPPKAT*FTPTAQ Trigger: TTGTGCTGTTGGAGTGAACCAAGTTGCTTTTGGAGG...ACTGTCTGTGAACAGCGCCACCTCTAGGCATGCTGTCCTTGAGTTATAAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 ENSMUST00000189559.7 |
||
| 3UTR CAA 72 bp | CCCAGGACGACGTGGAAGGCAATGACTGAGCCTTTATaGCAAAGAATGACAATCTTCCCATGCTCAGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRTTWKAMTEPL*QRMTIFPCSDC Trigger: ACAATCTGAGCATGGGAAGATTGTCATTCTTTGCAATAAAGGCTCAGTCATTGCCTTCCACGTCGTCCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
||
| 3UTR CAA 72 bp | GATACAGCTCTTGAGAGGCAGTGGGTTTGCTCTATGTaGGCATACTTATCATCTGGACACCTCACACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: DTALERQWVCSM*AYLSSGHLTHC Trigger: ACAGTGTGTGAGGTGTCCAGATGATAAGTATGCCAACATAGAGCAAACCCACTGCCTCTCAAGAGCTGTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189559.7 |
||
| CDS-3UTR TCA 90 bp | GGAATGACCAACTTAGGTGCCCCTGTCATCATCATCCCTCTCATCCTTCTTCCTACAACAATGAAATCGTaGAAGCACAGAGCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GMTNLGAPVIIIPLILLPTTMKS*KHRASS Trigger: TGAAGAAGCTCTGTGCTTTCACGATTTCATTGTTGT...AGGAAGAAGGATGAGAGGGATGATGATGACAGGGGCACCTAAGTTGGTCATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
||
| CDS-3UTR TCA 90 bp | TATAACTCAAGGACAGCATGCCTAGAGGTGGCGCTGTTCACAGACAGTAGGGTAGACAGTTTCCACCAATaGAGGAGAACATCAAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: YNSRTACLEVALFTDSRVDSFHQ*RRTSKL Trigger: TAACTTTGATGTTCTCCTTCATTGGTGGAAACTGTC...TACCCTACTGTCTGTGAACAGCGCCACCTCTAGGCATGCTGTCCTTGAGTTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
||
| CDS-3UTR TCA 90 bp | ATGACCAACTTAGGTGCCCCTGTCATCATCATCCCTCTCATCCTTCTTCCTGGAACTCTCAATAAATCCTaGCAGTTTCCACCAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MTNLGAPVIIIPLILLPGTLNKS*QFPPMK Trigger: CTTCATTGGTGGAAACTGTCAGGATTTATTGAGAGT...TCCAGGAAGAAGGATGAGAGGGATGATGATGACAGGGGCACCTAAGTTGGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074107.13 |
||
| CDS-3UTR TCA 90 bp | CTTTCTTATAACTCAAGGACAGCATGCCTAGAGGTGGCGCTGTTCACAGACAGTATCATAGTTGTGCAGTaGTGTCCATTCCAAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSYNSRTACLEVALFTDSIIVVQ*CPFQGV Trigger: AACACCTTGGAATGGACATCACTGCACAACTATGAT...ACTGTCTGTGAACAGCGCCACCTCTAGGCATGCTGTCCTTGAGTTATAAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
||
| CDS-3UTR CCA 90 bp | TATAACTCAAGGACAGCATGCCTAGAGGTGGCGCTGTTCACAGACAGTAGGGTAAAAATTATCTTCAACTaGTGTATCAGCTGCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YNSRTACLEVALFTDSRVKIIFN*CISCPK Trigger: CTTGGGGCAGCTGATACACCAGTTGAAGATAATTTT...TACCCTACTGTCTGTGAACAGCGCCACCTCTAGGCATGCTGTCCTTGAGTTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 ENSMUST00000189559.7 |
||
| 3UTR CAA 72 bp | AGGAGATGTGACCAACCAGATTCCACAGAGAACAAGTaGGATCAGGGTACAAATGGGAATGACCAACTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRCDQPDSTENK*DQGTNGNDQLR Trigger: CCTAAGTTGGTCATTCCCATTTGTACCCTGATCCAACTTGTTCTCTGTGGAATCTGGTTGGTCACATCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
||
| CDS-3UTR TCA 90 bp | CTTTCTTATAACTCAAGGACAGCATGCCTAGAGGTGGCGCTGTTCACAGACAGTTCCAACAGCACAAGATaGGAGAAAACTTCAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LSYNSRTACLEVALFTDSSNSTR*EKTSET Trigger: TGTTTCTGAAGTTTTCTCTCATCTTGTGCTGTTGGA...ACTGTCTGTGAACAGCGCCACCTCTAGGCATGCTGTCCTTGAGTTATAAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 ENSMUST00000189559.7 |
||
| CDS-3UTR TCA 90 bp | ATGGGAATGACCAACTTAGGTGCCCCTGTCATCATCATCCCTCTCATCCTTCTTTCCAACAGCACAAGATaGGAGAAAACTTCAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: MGMTNLGAPVIIIPLILLSNSTR*EKTSET Trigger: TGTTTCTGAAGTTTTCTCTCATCTTGTGCTGTTGGA...AAGAAGGATGAGAGGGATGATGATGACAGGGGCACCTAAGTTGGTCATTCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
||
| CDS-3UTR TCA 90 bp | AGACACAGTGAAAAATACTCCAAATGTGGTCTGCTGCAAGATGCAGGTGACCTGCAAGTCCATCTAAAGTaGAACATCAAGGAGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: RHSEKYSKCGLLQDAGDLQVHLK*NIKETM Trigger: CATGGTCTCCTTGATGTTTCACTTTAGATGGACTTG...CAGGTCACCTGCATCTTGCAGCAGACCACATTTGGAGTATTTTTCACTGTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074107.13 |
||
| CDS-3UTR TCA 90 bp | TTATTGGCCTTCACAATGGGAGTATCGTTGTGTTTCACAAATGTGACGAGGACTACCCTGGTCATCATCTaGGATGACCATTCCTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLAFTMGVSLCFTNVTRTTLVII*DDHSYP Trigger: TGGATAGGAATGGTCATCTCAGATGATGACCAGGGT...AGTCCTCGTCACATTTGTGAAACACAACGATACTCCCATTGTGAAGGCCAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074107.13 |
||
| CDS-3UTR TCA 90 bp | TCAATTGAGAATCCCAGTTCTCAACATATTCATGTTTGCTGTCCAGTTTGTAAGCCAAGAAAGCCAAAGTaGAGCTCCCCAGAGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SIENPSSQHIHVCCPVCKPRKPK*SSPEPR Trigger: CCTTGGCTCTGGGGAGCTTCACTTTGGCTTTCTTGG...CTTACAAACTGGACAGCAAACATGAATATGTTGAGAACTGGGATTCTCAATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
||
| CDS-3UTR CCA 90 bp | CATTGTGTATGCAGTACCCTTTCTTATAACTCAAGGACAGCATGCCTAGAGGTGTCCAAAGAAAACCAGTaGCATCGAAGAGTGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: HCVCSTLSYNSRTACLEVSKENQ*HRRVHC Trigger: GCAATGCACTCTTCGATGCCACTGGTTTTCTTTGGA...CACCTCTAGGCATGCTGTCCTTGAGTTATAAGAAAGGGTACTGCATACACAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
||
| CDS-3UTR GCA 90 bp | CATTGTGTATGCAGTACCCTTTCTTATAACTCAAGGACAGCATGCCTAGAGGTGAGTGGCATCGAAGAGTaGATTGCCAGTTTTAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HCVCSTLSYNSRTACLEVSGIEE*IASFKE Trigger: TTCCTTAAAACTGGCAATGCACTCTTCGATGCCACT...CACCTCTAGGCATGCTGTCCTTGAGTTATAAGAAAGGGTACTGCATACACAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
||
| CDS-3UTR CCA 90 bp | ATCTTCCCATGCTCAGATTGTATATCTCTGTCAATAAAGGGAGGAGATGTGACCCCTCCAAAAGCAACTTaGTTCACTCCAACAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: IFPCSDCISLSIKGGDVTPPKAT*FTPTAQ Trigger: TTGTGCTGTTGGAGTGAACCAAGTTGCTTTTGGAGG...GGTCACATCTCCTCCCTTTATTGACAGAGATATACAATCTGAGCATGGGAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
||
| CDS-3UTR CCA 90 bp | CTTTCTTATAACTCAAGGACAGCATGCCTAGAGGTGGCGCTGTTCACAGACAGTTATCTACTGGGTATTTaGCAGTGTTCATTGTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSYNSRTACLEVALFTDSYLLGI*QCSLFA Trigger: TGCAAACAATGAACACTGCCAAATACCCAGTAGATA...ACTGTCTGTGAACAGCGCCACCTCTAGGCATGCTGTCCTTGAGTTATAAGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
||
| CDS-3UTR CCA 90 bp | TATAACTCAAGGACAGCATGCCTAGAGGTGGCGCTGTTCACAGACAGTAGGGTAATGAGAAATATCTACTaGGTATTTGGCAGTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YNSRTACLEVALFTDSRVMRNIY*VFGSVH Trigger: ATGAACACTGCCAAATACCCAGTAGATATTTCTCAT...TACCCTACTGTCTGTGAACAGCGCCACCTCTAGGCATGCTGTCCTTGAGTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTTATAACTCAAGGACAGCATGCCTAGAGGTGGCGCTGTTCACAGACAGTGGAAATCTCATTTTCTaGGCACTGAACACAATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSYNSRTACLEVALFTDSGNLIF*ALNTIK Trigger: TTTGATTGTGTTCAGTGCCCAGAAAATGAGATTTCC...ACTGTCTGTGAACAGCGCCACCTCTAGGCATGCTGTCCTTGAGTTATAAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
||
| 3UTR CAA 72 bp | AGAATGCGGTTATTGGCCTTCACAATGGGAGTATCGTaGTGTTTCACAAATGTGACGAGGACTAGAATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RMRLLAFTMGVS*CFTNVTRTRIV Trigger: CACAATTCTAGTCCTCGTCACATTTGTGAAACACAACGATACTCCCATTGTGAAGGCCAATAACCGCATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
||
| CDS-3UTR TCA 90 bp | CATTGTGTATGCAGTACCCTTTCTTATAACTCAAGGACAGCATGCCTAGAGGTGACAACAATGAAATCGTaGAAGCACAGAGCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HCVCSTLSYNSRTACLEVTTMKS*KHRASS Trigger: TGAAGAAGCTCTGTGCTTTCACGATTTCATTGTTGT...CACCTCTAGGCATGCTGTCCTTGAGTTATAAGAAAGGGTACTGCATACACAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 ENSMUST00000189559.7 |
||
| CDS-3UTR TCA 90 bp | CATTGTGTATGCAGTACCCTTTCTTATAACTCAAGGACAGCATGCCTAGAGGTGCTTCAGAAACAACAATaGAATCGTGAAAGCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HCVCSTLSYNSRTACLEVLQKQQ*NRESTE Trigger: CTCTGTGCTTTCACGATTTCATTGTTGTTTCTGAAG...CACCTCTAGGCATGCTGTCCTTGAGTTATAAGAAAGGGTACTGCATACACAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 ENSMUST00000189559.7 |
||
| CDS-3UTR TCA 90 bp | TCAAGGCATGAACTTGGAAGTAAGAACTCCATGAAAGCAAGTGGAATAATGTTGGGTCATCATCTGAGATaGCCATTCCTATCCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRHELGSKNSMKASGIMLGHHLR*PFLSKS Trigger: GGACTTGGATAGGAATGGTCATCTCAGATGATGACC...CAACATTATTCCACTTGCTTTCATGGAGTTCTTACTTCCAAGTTCATGCCTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGTATCGTTGTGTTTCACAAATGTGACGAGGACTAGAATTGTGATGGCCAAATCTGAGAGAAACTaGATACCCTGGTCATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: MGVSLCFTNVTRTRIVMAKSERN*IPWSSS Trigger: AGATGATGACCAGGGTATTCAGTTTCTCTCAGATTT...GGCCATCACAATTCTAGTCCTCGTCACATTTGTGAAACACAACGATACTCCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074107.13 |
||
| CDS-3UTR GCA 90 bp | TTTGGGACAAAGATACACATTAGCAACCCTGCACTAGAAGCCAAGATGGAGAAAAACTGGTGTATCAGCTaGCCCAAGGTAAAAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: FGTKIHISNPALEAKMEKNWCIS*PKVKMT Trigger: TGTCATTTTTACCTTGGGGCAGCTGATACACCAGTT...TTTCTCCATCTTGGCTTCTAGTGCAGGGTTGCTAATGTGTATCTTTGTCCCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
||
| CDS-3UTR CCA 90 bp | CATTGTGTATGCAGTACCCTTTCTTATAACTCAAGGACAGCATGCCTAGAGGTGCAGATCCCATGCCTTTaGCTTTCTTCTCTTAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: HCVCSTLSYNSRTACLEVQIPCL*LSSLKS Trigger: AGATTTAAGAGAAGAAAGCCAAAGGCATGGGATCTG...CACCTCTAGGCATGCTGTCCTTGAGTTATAAGAAAGGGTACTGCATACACAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
||
| CDS-3UTR CCA 90 bp | CATTGTGTATGCAGTACCCTTTCTTATAACTCAAGGACAGCATGCCTAGAGGTGCCATATCTGTTTCGTTaGAAATCTCATTTTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HCVCSTLSYNSRTACLEVPYLFR*KSHFLG Trigger: GCCCAGAAAATGAGATTTCCAACGAAACAGATATGG...CACCTCTAGGCATGCTGTCCTTGAGTTATAAGAAAGGGTACTGCATACACAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
||
| CDS-3UTR CCA 90 bp | TCAATTGAGAATCCCAGTTCTCAACATATTCATGTTTGCTGTCCAGTTTGTAAGGCTCTTGAGAGGCAGTaGGTTTGCTCTATGTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SIENPSSQHIHVCCPVCKALERQ*VCSMLA Trigger: TGCCAACATAGAGCAAACCCACTGCCTCTCAAGAGC...CTTACAAACTGGACAGCAAACATGAATATGTTGAGAACTGGGATTCTCAATTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
||
| CDS-3UTR CCA 90 bp | ACCACAGATCAAAATGTTGGTAGCCATTCCTCAATTGAGAATCCCAGTTCTCAATCTCATCCTTCTTCCTaGAGTAGTGAGCTTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TTDQNVGSHSSIENPSSQSHPSS*SSELES Trigger: GCTTTCAAGCTCACTACTCCAGGAAGAAGGATGAGA...TTGAGAACTGGGATTCTCAATTGAGGAATGGCTACCAACATTTTGATCTGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGGACAAAGATACACATTAGCAACCCTGCACTAGAAGCCAAGATGGAGAAATCCAACAGCACAAGATaGGAGAAAACTTCAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: FGTKIHISNPALEAKMEKSNSTR*EKTSET Trigger: TGTTTCTGAAGTTTTCTCTCATCTTGTGCTGTTGGA...TTTCTCCATCTTGGCTTCTAGTGCAGGGTTGCTAATGTGTATCTTTGTCCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
||
| CDS-3UTR TCA 90 bp | ATGACTGAGCCTTTATTGCAAAGAATGACAATCTTCCCATGCTCAGATTGTATAGGTCATCATCTGAGATaGCCATTCCTATCCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MTEPLLQRMTIFPCSDCIGHHLR*PFLSKS Trigger: GGACTTGGATAGGAATGGTCATCTCAGATGATGACC...TATACAATCTGAGCATGGGAAGATTGTCATTCTTTGCAATAAAGGCTCAGTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074107.13 |
||
| CDS-3UTR TCA 90 bp | ACCACAGATCAAAATGTTGGTAGCCATTCCTCAATTGAGAATCCCAGTTCTCAAATCATAGTTGTGCAGTaGTGTCCATTCCAAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TTDQNVGSHSSIENPSSQIIVVQ*CPFQGV Trigger: AACACCTTGGAATGGACATCACTGCACAACTATGAT...TTGAGAACTGGGATTCTCAATTGAGGAATGGCTACCAACATTTTGATCTGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
||
| CDS-3UTR TCA 90 bp | ACCACAGATCAAAATGTTGGTAGCCATTCCTCAATTGAGAATCCCAGTTCTCAACCTGCTGACAAGCAGTaGAATATCTTTTGGGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TTDQNVGSHSSIENPSSQPADKQ*NIFWVL Trigger: CAAAACCCAAAAGATATTTCACTGCTTGTCAGCAGG...TTGAGAACTGGGATTCTCAATTGAGGAATGGCTACCAACATTTTGATCTGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
||
| CDS-3UTR TCA 90 bp | CATTGTGTATGCAGTACCCTTTCTTATAACTCAAGGACAGCATGCCTAGAGGTGTTTGATAAATTTTCCTaGATCCAGCAGTACATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HCVCSTLSYNSRTACLEVFDKFS*IQQYMP Trigger: TGGCATGTACTGCTGGATTCAGGAAAATTTATCAAA...CACCTCTAGGCATGCTGTCCTTGAGTTATAAGAAAGGGTACTGCATACACAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
||
| CDS-3UTR TCA 90 bp | ACCACAGATCAAAATGTTGGTAGCCATTCCTCAATTGAGAATCCCAGTTCTCAAACAACAATGAAATCGTaGAAGCACAGAGCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTDQNVGSHSSIENPSSQTTMKS*KHRASS Trigger: TGAAGAAGCTCTGTGCTTTCACGATTTCATTGTTGT...TTGAGAACTGGGATTCTCAATTGAGGAATGGCTACCAACATTTTGATCTGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 ENSMUST00000189559.7 |
||
| CDS-3UTR TCA 90 bp | GACAATCTTCCCATGCTCAGATTGTATATCTCTGTCAATAAAGGGAGGAGATGTCTTCAGAAACAACAATaGAATCGTGAAAGCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DNLPMLRLYISVNKGRRCLQKQQ*NRESTE Trigger: CTCTGTGCTTTCACGATTTCATTGTTGTTTCTGAAG...ACATCTCCTCCCTTTATTGACAGAGATATACAATCTGAGCATGGGAAGATTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
||
| CDS-3UTR TCA 90 bp | ACCACAGATCAAAATGTTGGTAGCCATTCCTCAATTGAGAATCCCAGTTCTCAAACTCTCAATAAATCCTaGCAGTTTCCACCAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TTDQNVGSHSSIENPSSQTLNKS*QFPPMK Trigger: CTTCATTGGTGGAAACTGTCAGGATTTATTGAGAGT...TTGAGAACTGGGATTCTCAATTGAGGAATGGCTACCAACATTTTGATCTGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGGCATGAACTTGGAAGTAAGAACTCCATGAAAGCAAGTGGAATAATGTTGAACTGGTGTATCAGCTaGCCCAAGGTAAAAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: SRHELGSKNSMKASGIMLNWCIS*PKVKMT Trigger: TGTCATTTTTACCTTGGGGCAGCTGATACACCAGTT...CAACATTATTCCACTTGCTTTCATGGAGTTCTTACTTCCAAGTTCATGCCTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 ENSMUST00000189559.7 |
||
| CDS-3UTR CCA 90 bp | TCAATTGAGAATCCCAGTTCTCAACATATTCATGTTTGCTGTCCAGTTTGTAAGCCACAGAGAACAAGTTaGATCAGGGTACAAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SIENPSSQHIHVCCPVCKPQRTS*IRVQMG Trigger: TCCCATTTGTACCCTGATCCAACTTGTTCTCTGTGG...CTTACAAACTGGACAGCAAACATGAATATGTTGAGAACTGGGATTCTCAATTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAGCCTTTATTGCAAAGAATGACAATCTTCCCATGCTCAGATTGTATATCTAACTGGTGTATCAGCTaGCCCAAGGTAAAAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: TEPLLQRMTIFPCSDCISNWCIS*PKVKMT Trigger: TGTCATTTTTACCTTGGGGCAGCTGATACACCAGTT...AGATATACAATCTGAGCATGGGAAGATTGTCATTCTTTGCAATAAAGGCTCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
||
| CDS-3UTR GCA 90 bp | TCAATTGAGAATCCCAGTTCTCAACATATTCATGTTTGCTGTCCAGTTTGTAAGAGTGGCATCGAAGAGTaGATTGCCAGTTTTAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SIENPSSQHIHVCCPVCKSGIEE*IASFKE Trigger: TTCCTTAAAACTGGCAATGCACTCTTCGATGCCACT...CTTACAAACTGGACAGCAAACATGAATATGTTGAGAACTGGGATTCTCAATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
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| CDS-3UTR CCA 90 bp | TCAATTGAGAATCCCAGTTCTCAACATATTCATGTTTGCTGTCCAGTTTGTAAGGGAATCTCAACTCTGTaGTGTGCAAAAGTGATAGTC | + |
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Preference number: 4 (lower is better) Translates to: SIENPSSQHIHVCCPVCKGISTL*CAKVIV Trigger: GACTATCACTTTTGCACACCACAGAGTTGAGATTCC...CTTACAAACTGGACAGCAAACATGAATATGTTGAGAACTGGGATTCTCAATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
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| CDS-3UTR CCA 90 bp | TTTGGGACAAAGATACACATTAGCAACCCTGCACTAGAAGCCAAGATGGAGAAAATGAGAAATATCTACTaGGTATTTGGCAGTGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: FGTKIHISNPALEAKMEKMRNIY*VFGSVH Trigger: ATGAACACTGCCAAATACCCAGTAGATATTTCTCAT...TTTCTCCATCTTGGCTTCTAGTGCAGGGTTGCTAATGTGTATCTTTGTCCCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074107.13 |
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| 3UTR CAA 72 bp | GGAAGTAAGAACTCCATGAAAGCAAGTGGAATAATGTaGATTACTGGCTTCATGTCCATTGTGTATGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: GSKNSMKASGIM*ITGFMSIVYAV Trigger: TACTGCATACACAATGGACATGAAGCCAGTAATCAACATTATTCCACTTGCTTTCATGGAGTTCTTACTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 ENSMUST00000189559.7 |
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| CDS-3UTR TCA 90 bp | TCAATTGAGAATCCCAGTTCTCAACATATTCATGTTTGCTGTCCAGTTTGTAAGGACAGTTTCCACCAATaGAGGAGAACATCAAAGTTA | + |
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Preference number: 4 (lower is better) Translates to: SIENPSSQHIHVCCPVCKDSFHQ*RRTSKL Trigger: TAACTTTGATGTTCTCCTTCATTGGTGGAAACTGTC...CTTACAAACTGGACAGCAAACATGAATATGTTGAGAACTGGGATTCTCAATTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
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| CDS-3UTR TCA 90 bp | TTAAACACAAAACCACAGATCAAAATGTTGGTAGCCATTCCTCAATTGAGAATCCAAGTCCATCTAAAGTaGAACATCAAGGAGACCATG | + |
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Preference number: 4 (lower is better) Translates to: LNTKPQIKMLVAIPQLRIQVHLK*NIKETM Trigger: CATGGTCTCCTTGATGTTTCACTTTAGATGGACTTG...GATTCTCAATTGAGGAATGGCTACCAACATTTTGATCTGTGGTTTTGTGTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
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| CDS-3UTR TCA 90 bp | ATGACTGAGCCTTTATTGCAAAGAATGACAATCTTCCCATGCTCAGATTGTATATCTGCTGACAAGCAGTaGAATATCTTTTGGGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: MTEPLLQRMTIFPCSDCISADKQ*NIFWVL Trigger: CAAAACCCAAAAGATATTTCACTGCTTGTCAGCAGA...TATACAATCTGAGCATGGGAAGATTGTCATTCTTTGCAATAAAGGCTCAGTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074107.13 |
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| CDS-3UTR TCA 90 bp | ATGACTGAGCCTTTATTGCAAAGAATGACAATCTTCCCATGCTCAGATTGTATACTGTTCCATATCTGCTaGCAAGCAGTGAAATATCTT | + |
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Preference number: 4 (lower is better) Translates to: MTEPLLQRMTIFPCSDCILFHIC*QAVKYL Trigger: AAGATATTTCACTGCTTGTCAGCAGATATGGAACAG...TATACAATCTGAGCATGGGAAGATTGTCATTCTTTGCAATAAAGGCTCAGTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074107.13 |
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| CDS-3UTR CCA 90 bp | ACTGAGCCTTTATTGCAAAGAATGACAATCTTCCCATGCTCAGATTGTATATCTAAAATTATCTTCAACTaGTGTATCAGCTGCCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: TEPLLQRMTIFPCSDCISKIIFN*CISCPK Trigger: CTTGGGGCAGCTGATACACCAGTTGAAGATAATTTT...AGATATACAATCTGAGCATGGGAAGATTGTCATTCTTTGCAATAAAGGCTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| CDS-3UTR CCA 90 bp | TCAATTGAGAATCCCAGTTCTCAACATATTCATGTTTGCTGTCCAGTTTGTAAGCAGATCCCATGCCTTTaGCTTTCTTCTCTTAAATCT | + |
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Preference number: 4 (lower is better) Translates to: SIENPSSQHIHVCCPVCKQIPCL*LSSLKS Trigger: AGATTTAAGAGAAGAAAGCCAAAGGCATGGGATCTG...CTTACAAACTGGACAGCAAACATGAATATGTTGAGAACTGGGATTCTCAATTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
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| CDS-3UTR CCA 90 bp | TTAAACACAAAACCACAGATCAAAATGTTGGTAGCCATTCCTCAATTGAGAATCGGGTTTGCTCTATGTTaGCATACTTATCATCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: LNTKPQIKMLVAIPQLRIGFALC*HTYHLD Trigger: GTCCAGATGATAAGTATGCCAACATAGAGCAAACCC...GATTCTCAATTGAGGAATGGCTACCAACATTTTGATCTGTGGTTTTGTGTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
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| 3UTR CAA 72 bp | TTTATTGCAAAGAATGACAATCTTCCCATGCTCAGATaGTATATCTCTGTCAATAAAGGGAGGAGATGTGAC | + |
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Preference number: 4 (lower is better) Translates to: FIAKNDNLPMLR*YISVNKGRRCD Trigger: GTCACATCTCCTCCCTTTATTGACAGAGATATACAATCTGAGCATGGGAAGATTGTCATTCTTTGCAATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| 3UTR CAA 72 bp | AAACCACAGATCAAAATGTTGGTAGCCATTCCTCAATaGAGAATCCCAGTTCTCAACATATTCATGTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: KPQIKMLVAIPQ*RIPVLNIFMFA Trigger: AGCAAACATGAATATGTTGAGAACTGGGATTCTCAATTGAGGAATGGCTACCAACATTTTGATCTGTGGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 ENSMUST00000189559.7 |
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| CDS-3UTR TCA 90 bp | TTAAACACAAAACCACAGATCAAAATGTTGGTAGCCATTCCTCAATTGAGAATCAAATCTGAGAGAAACTaGATACCCTGGTCATCATCT | + |
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Preference number: 4 (lower is better) Translates to: LNTKPQIKMLVAIPQLRIKSERN*IPWSSS Trigger: AGATGATGACCAGGGTATTCAGTTTCTCTCAGATTT...GATTCTCAATTGAGGAATGGCTACCAACATTTTGATCTGTGGTTTTGTGTTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
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| CDS-3UTR GCA 90 bp | TCAATTGAGAATCCCAGTTCTCAACATATTCATGTTTGCTGTCCAGTTTGTAAGATGACAATCTTCCCATaGTCAGATTGTATATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SIENPSSQHIHVCCPVCKMTIFP*SDCISL Trigger: CAGAGATATACAATCTGAGCATGGGAAGATTGTCAT...CTTACAAACTGGACAGCAAACATGAATATGTTGAGAACTGGGATTCTCAATTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
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| CDS TCA 90 bp | TCCAGCAGTACATGCCACACTACACACGGAGGAGGGAACCTGAGGTaGTGTTCCTCCCTTGGCCCATTCCAAATCATCAGATATATGAAG | + |
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Preference number: 5 (lower is better) Translates to: SSSTCHTTHGGGNLR*CSSLGPFQIIRYMK Trigger: CTTCATATATCTGATGATTTGGAATGGGCCAAGGGAGGAACATCACCTCAGGTTCCCTCCTCCGTGTGTAGTGTGGCATGTACTGCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
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| CDS TCA 90 bp | CTGAATCCAGCAGTACATGCCACACTACACACGGAGGAGGGAACCTaGGGTGATGTTCCTCCCTTGGCCCATTCCAAATCATCAGATATA | + |
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Preference number: 5 (lower is better) Translates to: LNPAVHATLHTEEGT*GDVPPLAHSKSSDI Trigger: TATATCTGATGATTTGGAATGGGCCAAGGGAGGAACATCACCTCAGGTTCCCTCCTCCGTGTGTAGTGTGGCATGTACTGCTGGATTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
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| CDS-3UTR CAA 90 bp | CTTTCTTATAACTCAAGGACAGCATGCCTAGAGGTGGCGCTGTTCACAGACAGTGGTGATGTTCCTCCCTaGGCCCATTCCAAATCATCA | + |
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Preference number: 5 (lower is better) Translates to: LSYNSRTACLEVALFTDSGDVPP*AHSKSS Trigger: TGATGATTTGGAATGGGCCAAGGGAGGAACATCACC...ACTGTCTGTGAACAGCGCCACCTCTAGGCATGCTGTCCTTGAGTTATAAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
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| CDS-3UTR CAA 90 bp | TATAACTCAAGGACAGCATGCCTAGAGGTGGCGCTGTTCACAGACAGTAGGGTATCCACAGAGAACAAGTaGGATCAGGGTACAAATGGG | + |
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Preference number: 5 (lower is better) Translates to: YNSRTACLEVALFTDSRVSTENK*DQGTNG Trigger: CCCATTTGTACCCTGATCCAACTTGTTCTCTGTGGA...TACCCTACTGTCTGTGAACAGCGCCACCTCTAGGCATGCTGTCCTTGAGTTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
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| CDS-3UTR CAA 90 bp | TATAACTCAAGGACAGCATGCCTAGAGGTGGCGCTGTTCACAGACAGTAGGGTAAAAATGACATTCCCTTaGCAAATCTCCGTCATTATC | + |
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Preference number: 5 (lower is better) Translates to: YNSRTACLEVALFTDSRVKMTFP*QISVII Trigger: GATAATGACGGAGATTTGCAAAGGGAATGTCATTTT...TACCCTACTGTCTGTGAACAGCGCCACCTCTAGGCATGCTGTCCTTGAGTTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 ENSMUST00000189559.7 |
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| CDS-3UTR CAA 90 bp | CATTGTGTATGCAGTACCCTTTCTTATAACTCAAGGACAGCATGCCTAGAGGTGGCATCGAAGAGTGCATaGCCAGTTTTAAGGAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: HCVCSTLSYNSRTACLEVASKSA*PVLRKF Trigger: AAACTTCCTTAAAACTGGCAATGCACTCTTCGATGC...CACCTCTAGGCATGCTGTCCTTGAGTTATAAGAAAGGGTACTGCATACACAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
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| CDS-3UTR CAA 90 bp | ATGGGAGTATCGTTGTGTTTCACAAATGTGACGAGGACTAGAATTGTGATGGCCAAAATGACATTCCCTTaGCAAATCTCCGTCATTATC | + |
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Preference number: 5 (lower is better) Translates to: MGVSLCFTNVTRTRIVMAKMTFP*QISVII Trigger: GATAATGACGGAGATTTGCAAAGGGAATGTCATTTT...GGCCATCACAATTCTAGTCCTCGTCACATTTGTGAAACACAACGATACTCCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000189559.7 |
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| CDS-3UTR CAA 90 bp | GACAATCTTCCCATGCTCAGATTGTATATCTCTGTCAATAAAGGGAGGAGATGTGCATCGAAGAGTGCATaGCCAGTTTTAAGGAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: DNLPMLRLYISVNKGRRCASKSA*PVLRKF Trigger: AAACTTCCTTAAAACTGGCAATGCACTCTTCGATGC...ACATCTCCTCCCTTTATTGACAGAGATATACAATCTGAGCATGGGAAGATTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074107.13 |
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| CDS-3UTR CAA 90 bp | TCAAGGCATGAACTTGGAAGTAAGAACTCCATGAAAGCAAGTGGAATAATGTTGACAATGGGAGTATCGTaGTGTTTCACAAATGTGACG | + |
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Preference number: 5 (lower is better) Translates to: SRHELGSKNSMKASGIMLTMGVS*CFTNVT Trigger: CGTCACATTTGTGAAACACAACGATACTCCCATTGT...CAACATTATTCCACTTGCTTTCATGGAGTTCTTACTTCCAAGTTCATGCCTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
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| CDS CCA 90 bp | ATCTCCGTCATTATCATCACTATTCTTTATCCTCCAAAAGCAACTTaGTTCACTCCAACAGCACAAGATGAGAGAAAACTTCAGAAACAA | + |
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Preference number: 5 (lower is better) Translates to: ISVIIITILYPPKAT*FTPTAQDERKLQKQ Trigger: TTGTTTCTGAAGTTTTCTCTCATCTTGTGCTGTTGGAGTGAACCAAGTTGCTTTTGGAGGATAAAGAATAGTGATGATAATGACGGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 ENSMUST00000189559.7 |
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| CDS-3UTR CAA 90 bp | TGCATGTTTTCTGGGATCATATTAACAAAAGCTAAACAGATCCCATGCCTTTGGAAAATGACATTCCCTTaGCAAATCTCCGTCATTATC | + |
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Preference number: 5 (lower is better) Translates to: CMFSGIILTKAKQIPCLWKMTFP*QISVII Trigger: GATAATGACGGAGATTTGCAAAGGGAATGTCATTTT...CCAAAGGCATGGGATCTGTTTAGCTTTTGTTAATATGATCCCAGAAAACATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000189559.7 |
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| CDS TCA 90 bp | CCATTTATTTGTGTATATGCTTGGTCCATAACTCTCAATAAATCCTaGCAGTTTCCACCAATGAAGGAGAACATCAAAGTTATGTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: PFICVYAWSITLNKS*QFPPMKENIKVMLG Trigger: ACCCAACATAACTTTGATGTTCTCCTTCATTGGTGGAAACTGTCAGGATTTATTGAGAGTTATGGACCAAGCATATACACAAATAAATGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
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| CDS-3UTR CAA 90 bp | TTAAACACAAAACCACAGATCAAAATGTTGGTAGCCATTCCTCAATTGAGAATCTCCATATCTGTTTCGTaGGAAATCTCATTTTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: LNTKPQIKMLVAIPQLRISISVS*EISFSG Trigger: CCCAGAAAATGAGATTTCCAACGAAACAGATATGGA...GATTCTCAATTGAGGAATGGCTACCAACATTTTGATCTGTGGTTTTGTGTTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
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| CDS TCA 72 bp | GCAGTACATGCCACACTACACACGGAGGAGGGAACCTaGGGTGATGTTCCTCCCTTGGCCCATTCCAAATCA | + |
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Preference number: 6 (lower is better) Translates to: AVHATLHTEEGT*GDVPPLAHSKS Trigger: TGATTTGGAATGGGCCAAGGGAGGAACATCACCTCAGGTTCCCTCCTCCGTGTGTAGTGTGGCATGTACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
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| CDS TCA 72 bp | ACATGCCACACTACACACGGAGGAGGGAACCTGAGGTaGTGTTCCTCCCTTGGCCCATTCCAAATCATCAGA | + |
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Preference number: 6 (lower is better) Translates to: TCHTTHGGGNLR*CSSLGPFQIIR Trigger: TCTGATGATTTGGAATGGGCCAAGGGAGGAACATCACCTCAGGTTCCCTCCTCCGTGTGTAGTGTGGCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
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| CDS CCA 72 bp | ACACGGAGGAGGGAACCTGAGGTGATGTTCCTCCCTTaGCCCATTCCAAATCATCAGATATATGAAGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: TRRREPEVMFLP*PIPNHQIYEVF Trigger: AAAAACTTCATATATCTGATGATTTGGAATGGGCCAAGGGAGGAACATCACCTCAGGTTCCCTCCTCCGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096792.8 |
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| CDS TCA 72 bp | TGTGTATATGCTTGGTCCATAACTCTCAATAAATCCTaGCAGTTTCCACCAATGAAGGAGAACATCAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: CVYAWSITLNKS*QFPPMKENIKV Trigger: AACTTTGATGTTCTCCTTCATTGGTGGAAACTGTCAGGATTTATTGAGAGTTATGGACCAAGCATATACACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 |
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| CDS CAA 72 bp | TGTATCAGCTGCCCCAAGGTAAAAATGACATTCCCTTaGCAAATCTCCGTCATTATCATCACTATTCTTTAT | + |
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Preference number: 6 (lower is better) Translates to: CISCPKVKMTFP*QISVIIITILY Trigger: ATAAAGAATAGTGATGATAATGACGGAGATTTGCAAAGGGAATGTCATTTTTACCTTGGGGCAGCTGATACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 ENSMUST00000189559.7 |
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| CDS CCA 72 bp | ATTATCATCACTATTCTTTATCCTCCAAAAGCAACTTaGTTCACTCCAACAGCACAAGATGAGAGAAAACTT | + |
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Preference number: 6 (lower is better) Translates to: IIITILYPPKAT*FTPTAQDERKL Trigger: AAGTTTTCTCTCATCTTGTGCTGTTGGAGTGAACCAAGTTGCTTTTGGAGGATAAAGAATAGTGATGATAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074107.13 ENSMUST00000096792.8 ENSMUST00000189559.7 |
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