Pregenerated sensors for VMN2R128 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091967Ensembl transcript IDs: ENSMUST00000175971.3, ENSMUST00000234658.2
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCCCAGTGCCAGAGTGATCTGGCGGGCCATGCAGGACCAGTTGCATaGCTTGCCTATAAACAGCAAAGAAGACAGCACAGTGATGACCAG | + |
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Preference number: 5 (lower is better) Translates to: AQCQSDLAGHAGPVA*LAYKQQRRQHSDDQ Trigger: CTGGTCATCACTGTGCTGTCTTCTTTGCTGTTTATAGGCAAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCACTCTGGCACTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS TCA 90 bp | AACAGTGGACACTGTAGTGCTGTTAAGCTCACTGCTCACAGAAGCTaGGGTCAGCTGGATGCTCCTGTCAACAGTGGGGACTCTTCCACC | + |
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Preference number: 5 (lower is better) Translates to: NSGHCSAVKLTAHRS*GQLDAPVNSGDSST Trigger: GGTGGAAGAGTCCCCACTGTTGACAGGAGCATCCAGCTGACCTCAGCTTCTGTGAGCAGTGAGCTTAACAGCACTACAGTGTCCACTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS CCA 90 bp | AGAATGGAAGACAGACAAAGGCAAAAGCCCAGTGCCAGAGTGATCTaGCGGGCCATGCAGGACCAGTTGCATGGCTTGCCTATAAACAGC | + |
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Preference number: 5 (lower is better) Translates to: RMEDRQRQKPSARVI*RAMQDQLHGLPINS Trigger: GCTGTTTATAGGCAAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCACTCTGGCACTGGGCTTTTGCCTTTGTCTGTCTTCCATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS GCA 90 bp | GTGTCTGTGGATTACGTACACAACAGTGACTGCCAAGACCACAAGTaGCCCAAAGATGGAAAGGATGACAAGGGTGAACCCCAGTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: VSVDYVHNSDCQDHK*PKDGKDDKGEPQCL Trigger: GAGGCACTGGGGTTCACCCTTGTCATCCTTTCCATCTTTGGGGCACTTGTGGTCTTGGCAGTCACTGTTGTGTACGTAATCCACAGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS CCA 90 bp | AAGCTCAGCTCCCGGTCATTGGCTTTCACCAATGGAGTGTGTCTGTaGATTACGTACACAACAGTGACTGCCAAGACCACAAGTGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: KLSSRSLAFTNGVCL*ITYTTVTAKTTSAP Trigger: TGGGGCACTTGTGGTCTTGGCAGTCACTGTTGTGTACGTAATCCACAGACACACTCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS CCA 90 bp | GGTGAACCCCAGTGCCTCTTCATAAGCAAGGAATTCCACATGCTTTaGCACACACTTGCTCTTCTCTGCATTGGACCAGTCATCTTCACC | + |
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Preference number: 5 (lower is better) Translates to: GEPQCLFISKEFHML*HTLALLCIGPVIFT Trigger: GGTGAAGATGACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCATGTGGAATTCCTTGCTTATGAAGAGGCACTGGGGTTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS GCA 90 bp | TTTCACCAATGGAGTGTGTCTGTGGATTACGTACACAACAGTGACTaGCAAGACCACAAGTGCCCCAAAGATGGAAAGGATGACAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: FHQWSVSVDYVHNSD*QDHKCPKDGKDDKG Trigger: ACCCTTGTCATCCTTTCCATCTTTGGGGCACTTGTGGTCTTGGCAGTCACTGTTGTGTACGTAATCCACAGACACACTCCATTGGTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS CCA 90 bp | CAAGGAATTCCACATGCTTTGGCACACACTTGCTCTTCTCTGCATTaGACCAGTCATCTTCACCGCATGGATCACATTCTCTTTGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: QGIPHALAHTCSSLH*TSHLHRMDHILFVL Trigger: CAGGACAAAGAGAATGTGATCCATGCGGTGAAGATGACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCATGTGGAATTCCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS CCA 90 bp | CATCTGAATGAAAAAGCTCAGCTCCCGGTCATTGGCTTTCACCAATaGAGTGTGTCTGTGGATTACGTACACAACAGTGACTGCCAAGAC | + |
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Preference number: 5 (lower is better) Translates to: HLNEKAQLPVIGFHQ*SVSVDYVHNSDCQD Trigger: GTCTTGGCAGTCACTGTTGTGTACGTAATCCACAGACACACTCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTTTTTCATTCAGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS GCA 90 bp | ATAAGCAAGGAATTCCACATGCTTTGGCACACACTTGCTCTTCTCTaGATTGGACCAGTCATCTTCACCGCATGGATCACATTCTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: ISKEFHMLWHTLALL*IGPVIFTAWITFSL Trigger: CAAAGAGAATGTGATCCATGCGGTGAAGATGACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCATGTGGAATTCCTTGCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS CCA 90 bp | GACCAGCATTCCAAAAGTGATACATTTCCCTTCATAATAGTTATCTaGCAGCTGGCGAGCCACAAAGGTGGTAACAAAACACAGCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: DQHSKSDTFPFIIVI*QLASHKGGNKTQQS Trigger: GCTCTGCTGTGTTTTGTTACCACCTTTGTGGCTCGCCAGCTGCCAGATAACTATTATGAAGGGAAATGTATCACTTTTGGAATGCTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS TCA 90 bp | AGCCATAGCTGGATGCCAAAATGGCAAATATTTCCACAGCCACTTTaGATTTGCCTTTGGTGCTCAAGTAAGCAGGGACAAAAGAGATCC | + |
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Preference number: 5 (lower is better) Translates to: SHSWMPKWQIFPQPL*ICLWCSSKQGQKRS Trigger: GGATCTCTTTTGTCCCTGCTTACTTGAGCACCAAAGGCAAATTCAAAGTGGCTGTGGAAATATTTGCCATTTTGGCATCCAGCTATGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS TCA 90 bp | GATCATGGTTTTCATCCAGCGGAAACCCCGGAAATTAAACATGGCTaGTACGAATTCCGTGGCAGAGTTATTTATTGGGATGGTTCTAGT | + |
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Preference number: 5 (lower is better) Translates to: DHGFHPAETPEIKHG*YEFRGRVIYWDGSS Trigger: ACTAGAACCATCCCAATAAATAACTCTGCCACGGAATTCGTATCAGCCATGTTTAATTTCCGGGGTTTCCGCTGGATGAAAACCATGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175971.3 |
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| CDS CCA 90 bp | AAAGATGATCTTTACATTTTGAATTTCAATGTTCTTGAACAGGCTTaGAGGCTCCAACACCAAGTATACTGCACATACACAAATCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: KDDLYILNFNVLEQA*RLQHQVYCTYTNLP Trigger: GGGGAGATTTGTGTATGTGCAGTATACTTGGTGTTGGAGCCTCCAAGCCTGTTCAAGAACATTGAAATTCAAAATGTAAAGATCATCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS CCA 72 bp | GACAGACAAAGGCAAAAGCCCAGTGCCAGAGTGATCTaGCGGGCCATGCAGGACCAGTTGCATGGCTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: DRQRQKPSARVI*RAMQDQLHGLP Trigger: AGGCAAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCACTCTGGCACTGGGCTTTTGCCTTTGTCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS CAA 72 bp | AGTGCCAGAGTGATCTGGCGGGCCATGCAGGACCAGTaGCATGGCTTGCCTATAAACAGCAAAGAAGACAGC | + |
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Preference number: 6 (lower is better) Translates to: SARVIWRAMQDQ*HGLPINSKEDS Trigger: GCTGTCTTCTTTGCTGTTTATAGGCAAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCACTCTGGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS CAA 90 bp | AGTGCCAGAGTGATCTGGCGGGCCATGCAGGACCAGTTGCATGGCTaGCCTATAAACAGCAAAGAAGACAGCACAGTGATGACCAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: SARVIWRAMQDQLHG*PINSKEDSTVMTRD Trigger: GTCTCTGGTCATCACTGTGCTGTCTTCTTTGCTGTTTATAGGCAAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCACTCTGGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS CAA 90 bp | CAAAAGCCCAGTGCCAGAGTGATCTGGCGGGCCATGCAGGACCAGTaGCATGGCTTGCCTATAAACAGCAAAGAAGACAGCACAGTGATG | + |
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Preference number: 6 (lower is better) Translates to: QKPSARVIWRAMQDQ*HGLPINSKEDSTVM Trigger: CATCACTGTGCTGTCTTCTTTGCTGTTTATAGGCAAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCACTCTGGCACTGGGCTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS CAA 72 bp | GTGATCTGGCGGGCCATGCAGGACCAGTTGCATGGCTaGCCTATAAACAGCAAAGAAGACAGCACAGTGATG | + |
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Preference number: 6 (lower is better) Translates to: VIWRAMQDQLHG*PINSKEDSTVM Trigger: CATCACTGTGCTGTCTTCTTTGCTGTTTATAGGCAAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS CAA 72 bp | AGCCTACCTGAGCTATGTCATACACCCCGAGAAGTCTaGCAGCAGAAACTGACAAGGATGAACCTCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: SLPELCHTPREV*QQKLTRMNLLL Trigger: GAGCAGGAGGTTCATCCTTGTCAGTTTCTGCTGCAAGACTTCTCGGGGTGTATGACATAGCTCAGGTAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175971.3 |
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| CDS CAA 90 bp | GTTGTCCCGGTCGAATCCCCTTTCGGGTCCCTGGAGCACACAGTTTaGTGCAGAATGAATCTGGAAGCCTTGAAGATTCAGTGTTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: VVPVESPFGSLEHTV*CRMNLEALKIQCSK Trigger: TTTGGAACACTGAATCTTCAAGGCTTCCAGATTCATTCTGCACAAAACTGTGTGCTCCAGGGACCCGAAAGGGGATTCGACCGGGACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS GCA 72 bp | GATTACGTACACAACAGTGACTGCCAAGACCACAAGTaGCCCAAAGATGGAAAGGATGACAAGGGTGAACCC | + |
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Preference number: 6 (lower is better) Translates to: DYVHNSDCQDHK*PKDGKDDKGEP Trigger: GGGTTCACCCTTGTCATCCTTTCCATCTTTGGGGCACTTGTGGTCTTGGCAGTCACTGTTGTGTACGTAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS CCA 72 bp | TCCCGGTCATTGGCTTTCACCAATGGAGTGTGTCTGTaGATTACGTACACAACAGTGACTGCCAAGACCACA | + |
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Preference number: 6 (lower is better) Translates to: SRSLAFTNGVCL*ITYTTVTAKTT Trigger: TGTGGTCTTGGCAGTCACTGTTGTGTACGTAATCCACAGACACACTCCATTGGTGAAAGCCAATGACCGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS TCA 72 bp | CCAATGGAGTGTGTCTGTGGATTACGTACACAACAGTaGCTGCCAAGACCACAAGTGCCCCAAAGATGGAAA | + |
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Preference number: 6 (lower is better) Translates to: PMECVCGLRTQQ*LPRPQVPQRWK Trigger: TTTCCATCTTTGGGGCACTTGTGGTCTTGGCAGTCACTGTTGTGTACGTAATCCACAGACACACTCCATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS GCA 72 bp | GAATTCCACATGCTTTGGCACACACTTGCTCTTCTCTaGATTGGACCAGTCATCTTCACCGCATGGATCACA | + |
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Preference number: 6 (lower is better) Translates to: EFHMLWHTLALL*IGPVIFTAWIT Trigger: TGTGATCCATGCGGTGAAGATGACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCATGTGGAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS GCA 72 bp | TGGAGTGTGTCTGTGGATTACGTACACAACAGTGACTaGCAAGACCACAAGTGCCCCAAAGATGGAAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: WSVSVDYVHNSD*QDHKCPKDGKD Trigger: ATCCTTTCCATCTTTGGGGCACTTGTGGTCTTGGCAGTCACTGTTGTGTACGTAATCCACAGACACACTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS CCA 72 bp | GAAAAAGCTCAGCTCCCGGTCATTGGCTTTCACCAATaGAGTGTGTCTGTGGATTACGTACACAACAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: EKAQLPVIGFHQ*SVSVDYVHNSD Trigger: GTCACTGTTGTGTACGTAATCCACAGACACACTCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS CAA 90 bp | GCAAGGAATTCCACATGCTTTGGCACACACTTGCTCTTCTCTGCATaGGACCAGTCATCTTCACCGCATGGATCACATTCTCTTTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: ARNSTCFGTHLLFSA*DQSSSPHGSHSLCP Trigger: AGGACAAAGAGAATGTGATCCATGCGGTGAAGATGACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCATGTGGAATTCCTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS TCA 72 bp | AGCAAAGAAGACAGCACAGTGATGACCAGAGACATCTaGATGAAAAAGCTCAGCTCCCGGTCATTGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SKEDSTVMTRDI*MKKLSSRSLAF Trigger: GAAAGCCAATGACCGGGAGCTGAGCTTTTTCATTCAGATGTCTCTGGTCATCACTGTGCTGTCTTCTTTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS CAA 90 bp | ATTGTAAGGCACACTGCTGTTGGGCCAGGTACAGTTAAAAGCAGTTaGCCAGAATTCAATGGTCAAGACATCATTTGGATCCTTGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: IVRHTAVGPGTVKSS*PEFNGQDIIWILAR Trigger: CCTAGCAAGGATCCAAATGATGTCTTGACCATTGAATTCTGGCAAACTGCTTTTAACTGTACCTGGCCCAACAGCAGTGTGCCTTACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175971.3 |
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| CDS TCA 72 bp | TTCAGATCTTCCAGCTTCTCCTCTCCAGTGCAGAGCTaGTCAGACATGTCATACAGTCTGTTTTCTTTACCA | + |
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Preference number: 6 (lower is better) Translates to: FRSSSFSSPVQS*SDMSYSLFSLP Trigger: TGGTAAAGAAAACAGACTGTATGACATGTCTGATCAGCTCTGCACTGGAGAGGAGAAGCTGGAAGATCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175971.3 |
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| CDS GCA 72 bp | AGGTGTTTTTCAGATCTTCCAGCTTCTCCTCTCCAGTaGAGAGCTGATCAGACATGTCATACAGTCTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: RCFSDLPASPLQ*RADQTCHTVCF Trigger: AAAACAGACTGTATGACATGTCTGATCAGCTCTGCACTGGAGAGGAGAAGCTGGAAGATCTGAAAAACACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175971.3 |
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| CDS CCA 72 bp | TCCAAAAGTGATACATTTCCCTTCATAATAGTTATCTaGCAGCTGGCGAGCCACAAAGGTGGTAACAAAACA | + |
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Preference number: 6 (lower is better) Translates to: SKSDTFPFIIVI*QLASHKGGNKT Trigger: TGTTTTGTTACCACCTTTGTGGCTCGCCAGCTGCCAGATAACTATTATGAAGGGAAATGTATCACTTTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS CAA 90 bp | ACAAACGGGCTGAGGTCCATGTCAGAAGTATATAGAACAATGACTTaGGCACTGGAACTCTTTATTGCCTTGACAGCTTTTTACATTTTC | + |
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Preference number: 6 (lower is better) Translates to: TNGLRSMSEVYRTMT*ALELFIALTAFYIF Trigger: GAAAATGTAAAAAGCTGTCAAGGCAATAAAGAGTTCCAGTGCCAAAGTCATTGTTCTATATACTTCTGACATGGACCTCAGCCCGTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175971.3 |
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| CDS CAA 90 bp | AAGGCAATAGCTCTTTGGGCTCAAAGTCAGGTATATGTGAACATGTaGTATCATTCCTCTGTTCTTCCAATAAGTCACAAGTGCTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: KAIALWAQSQVYVNM*YHSSVLPISHKCLN Trigger: GTTTAAGCACTTGTGACTTATTGGAAGAACAGAGGAATGATACAACATGTTCACATATACCTGACTTTGAGCCCAAAGAGCTATTGCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175971.3 |
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| CDS CCA 72 bp | CTTTACATTTTGAATTTCAATGTTCTTGAACAGGCTTaGAGGCTCCAACACCAAGTATACTGCACATACACA | + |
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Preference number: 6 (lower is better) Translates to: LYILNFNVLEQA*RLQHQVYCTYT Trigger: TGTGTATGTGCAGTATACTTGGTGTTGGAGCCTCCAAGCCTGTTCAAGAACATTGAAATTCAAAATGTAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS CAA 90 bp | AGAACAAGTTCATATTTTGTAGAATTAAATCTGTATTCTCCAACCTaGACAAAGGTGATTTCTCCAGCATCACCCATGTGCCAATTGAGG | + |
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Preference number: 6 (lower is better) Translates to: RTSSYFVELNLYSPT*TKVISPASPMCQLR Trigger: CCTCAATTGGCACATGGGTGATGCTGGAGAAATCACCTTTGTCAAGGTTGGAGAATACAGATTTAATTCTACAAAATATGAACTTGTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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| CDS TCA 72 bp | AAGACATCATTTGGATCCTTGCTAGGGTGTACATCATaGAGGAATTCTTTTAGTCCTGGTATAACACTTCTT | + |
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Preference number: 6 (lower is better) Translates to: KTSFGSLLGCTS*RNSFSPGITLL Trigger: AAGAAGTGTTATACCAGGACTAAAAGAATTCCTTCATGATGTACACCCTAGCAAGGATCCAAATGATGTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175971.3 |
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| CDS CAA 72 bp | TCACCATGGCCTCAATCTGGAATTTATCACTGGGTATaGAGCGATAAAATGATTGGAACTGTAATTTATCAC | + |
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Preference number: 6 (lower is better) Translates to: SPWPQSGIYHWV*SDKMIGTVIYH Trigger: GTGATAAATTACAGTTCCAATCATTTTATCGCTCAATACCCAGTGATAAATTCCAGATTGAGGCCATGGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175971.3 |
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| CDS CAA 72 bp | TCATATTTTGTAGAATTAAATCTGTATTCTCCAACCTaGACAAAGGTGATTTCTCCAGCATCACCCATGTGC | + |
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Preference number: 6 (lower is better) Translates to: SYFVELNLYSPT*TKVISPASPMC Trigger: GCACATGGGTGATGCTGGAGAAATCACCTTTGTCAAGGTTGGAGAATACAGATTTAATTCTACAAAATATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175971.3 ENSMUST00000234658.2 |
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