Pregenerated sensors for VMN2R121 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072049Ensembl transcript IDs: ENSMUST00000094491.5, ENSMUST00000233359.2, ENSMUST00000233504.2
Found 268 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCATTGTATACACATACAAGCACTTATGTACCTACTGCACGCGTGTaGACATGCGCATGCACGCGCGCGTGCGCGCGCGCGCGCGCGCGC | + |
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Preference number: 1 (lower is better) Translates to: SLYTHTSTYVPTARV*TCACTRACARARAR Trigger: GCGCGCGCGCGCGCGCGCGCACGCGCGCGTGCATGCGCATGTGCACACGCGTGCAGTAGGTACATAAGTGCTTGTATGTGTATACAATGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR TCA 90 bp | AAGGAGACCATGCCATGGGACAAATGTGTGTCCTTGGTGGCTACTTaGTGGACATGGGGCAGCCGGTCATGGTCGCGTAGGTTAGGATTA | + |
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Preference number: 1 (lower is better) Translates to: KETMPWDKCVSLVAT*WTWGSRSWSRRLGL Trigger: TAATCCTAACCTACGCGACCATGACCGGCTGCCCCATGTCCATCAAGTAGCCACCAAGGACACACATTTGTCCCATGGCATGGTCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233504.2 |
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| 3UTR TCA 90 bp | CAACTCCTGCTTCCTGGCCCTGGCATTCTTCTGTATTGGGGCATTTaGTCTTCACAAGACCAAGTGCCTGTCCGTTCTTTGATGGCGGAC | + |
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Preference number: 1 (lower is better) Translates to: QLLLPGPGILLYWGI*SSQDQVPVRSLMAD Trigger: GTCCGCCATCAAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAAATGCCCCAATACAGAAGAATGCCAGGGCCAGGAAGCAGGAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CCA 90 bp | TACCCTCCCCATACCCTGCTTTCCAACCCACCAACTCCTGCTTCCTaGCCCTGGCATTCTTCTGTATTGGGGCATTTGATCTTCACAAGA | + |
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Preference number: 1 (lower is better) Translates to: YPPHTLLSNPPTPAS*PWHSSVLGHLIFTR Trigger: TCTTGTGAAGATCAAATGCCCCAATACAGAAGAATGCCAGGGCCAGGAAGCAGGAGTTGGTGGGTTGGAAAGCAGGGTATGGGGAGGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CCA 90 bp | AGTTGTGTCTGTGTTTGGTGGTTGATTATGGGATGGATCACTGGATaGGGAGTCTCTGCATGGTCCTTCCTTCCATCTCATCTCCAAGCT | + |
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Preference number: 1 (lower is better) Translates to: SCVCVWWLIMGWITG*GVSAWSFLPSHLQA Trigger: AGCTTGGAGATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCATAATCAACCACCAAACACAGACACAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CCA 90 bp | ATGCAGTTGTGTCTGTGTTTGGTGGTTGATTATGGGATGGATCACTaGATGGGGAGTCTCTGCATGGTCCTTCCTTCCATCTCATCTCCA | + |
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Preference number: 1 (lower is better) Translates to: MQLCLCLVVDYGMDH*MGSLCMVLPSISSP Trigger: TGGAGATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCATAATCAACCACCAAACACAGACACAACTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CCA 90 bp | GTTGGCATATGCAGTTGTGTCTGTGTTTGGTGGTTGATTATGGGATaGATCACTGGATGGGGAGTCTCTGCATGGTCCTTCCTTCCATCT | + |
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Preference number: 1 (lower is better) Translates to: VGICSCVCVWWLIMG*ITGWGVSAWSFLPS Trigger: AGATGGAAGGAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCATAATCAACCACCAAACACAGACACAACTGCATATGCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR GCA 90 bp | TGTTTGGTGGTTGATTATGGGATGGATCACTGGATGGGGAGTCTCTaGATGGTCCTTCCTTCCATCTCATCTCCAAGCTTTGTCTCTGTA | + |
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Preference number: 1 (lower is better) Translates to: CLVVDYGMDHWMGSL*MVLPSISSPSFVSV Trigger: TACAGAGACAAAGCTTGGAGATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCATAATCAACCACCAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CCA 90 bp | CATATTGCTGTTCCTCTTATAGGGTTTCAGACCCCTTCAGCTCCTTaGGAACTTTCTCTAGTTGCTTCATTCGGGGCCATGTGTTCCATC | + |
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Preference number: 1 (lower is better) Translates to: HIAVPLIGFQTPSAP*ELSLVASFGAMCSI Trigger: GATGGAACACATGGCCCCGAATGAAGCAACTAGAGAAAGTTCCCAAGGAGCTGAAGGGGTCTGAAACCCTATAAGAGGAACAGCAATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR GCA 90 bp | TATAGGGTTTCAGACCCCTTCAGCTCCTTGGGAACTTTCTCTAGTTaGTTCATTCGGGGCCATGTGTTCCATCCAATAGATGACTCTAAG | + |
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Preference number: 1 (lower is better) Translates to: YRVSDPFSSLGTFSS*FIRGHVFHPIDDSK Trigger: CTTAGAGTCATCTATTGGATGGAACACATGGCCCCGAATGAAGCAACTAGAGAAAGTTCCCAAGGAGCTGAAGGGGTCTGAAACCCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CCA 90 bp | ATAAAGGGAGGAGATGTGACCAACCAGATTCCACAGAGAACAAGTTaGATTAGGGTACAAATGGGAATGACCAACTTAGGTGCCCCTGTC | + |
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Preference number: 1 (lower is better) Translates to: IKGGDVTNQIPQRTS*IRVQMGMTNLGAPV Trigger: GACAGGGGCACCTAAGTTGGTCATTCCCATTTGTACCCTAATCCAACTTGTTCTCTGTGGAATCTGGTTGGTCACATCTCCTCCCTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CCA 90 bp | CCAGAAATGATACAGCTCTTGAGAGGCAGTGGGTTTGCTCTATGTTaGCATACTTATCATCTGGACACCTCACACACTGTTCCATATCTG | + |
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Preference number: 1 (lower is better) Translates to: PEMIQLLRGSGFALC*HTYHLDTSHTVPYL Trigger: CAGATATGGAACAGTGTGTGAGGTGTCCAGATGATAAGTATGCCAACATAGAGCAAACCCACTGCCTCTCAAGAGCTGTATCATTTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR TCA 90 bp | TGGCCCCACACTCTCAAAAATGGCCTGGCTAAGGGTATTTGTATTTaGTCTTATCTCTTACAGAAGCAAAGCTCTCTGATGGTGGCTGAT | + |
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Preference number: 1 (lower is better) Translates to: WPHTLKNGLAKGICI*SYLLQKQSSLMVAD Trigger: ATCAGCCACCATCAGAGAGCTTTGCTTCTGTAAGAGATAAGATCAAATACAAATACCCTTAGCCAGGCCATTTTTGAGAGTGTGGGGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR TCA 90 bp | TGGTCATCATCTGAGATGACCAGTCCTATCCAAGTCCATCTAAAATaGAACATCAAGGAGACCATGCCATGGGACAAATGTGTGTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: WSSSEMTSPIQVHLK*NIKETMPWDKCVSL Trigger: CAAGGACACACATTTGTCCCATGGCATGGTCTCCTTGATGTTTCATTTTAGATGGACTTGGATAGGACTGGTCATCTCAGATGATGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CCA 90 bp | CACACACTGTTCCATATCTGCTGTTTCATTGGAAACCTCATTTTCTaGGCATTGAACACAATCAAAGCAGCAGTCTGCTGTTTCTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: HTLFHICCFIGNLIF*ALNTIKAAVCCFFL Trigger: CAGGAAGAAACAGCAGACTGCTGCTTTGATTGTGTTCAATGCCCAGAAAATGAGGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR GCA 90 bp | GAGTCAGATATATCAGGGTCCCTTCTGCAAAATATTGTTGGCATATaGAGTTGTGTCTGTGTTTGGTGGTTGATTATGGGATGGATCACT | + |
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Preference number: 1 (lower is better) Translates to: ESDISGSLLQNIVGI*SCVCVWWLIMGWIT Trigger: AGTGATCCATCCCATAATCAACCACCAAACACAGACACAACTGCATATGCCAACAATATTTTGCAGAAGGGACCCTGATATATCTGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR GCA 90 bp | AGCTTTTTCACACCTGTCTGTGTGTTGAACTCCAGGGTCACTGGATaGCTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTAT | + |
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Preference number: 1 (lower is better) Translates to: SFFTPVCVLNSRVTG*LFSADSLYTHTSTY Trigger: ATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAGGCATCCAGTGACCCTGGAGTTCAACACACAGACAGGTGTGAAAAAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CCA 90 bp | CTCATAAGAGTCAGATATATCAGGGTCCCTTCTGCAAAATATTGTTaGCATATGCAGTTGTGTCTGTGTTTGGTGGTTGATTATGGGATG | + |
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Preference number: 1 (lower is better) Translates to: LIRVRYIRVPSAKYC*HMQLCLCLVVDYGM Trigger: CATCCCATAATCAACCACCAAACACAGACACAACTGCATATGCCAACAATATTTTGCAGAAGGGACCCTGATATATCTGACTCTTATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR TCA 90 bp | ATGAAATTAGATGCAAGAACTCCAAGAAAGCAAGCGGGAGAATGTTaGTTACTGGCTTCATGTCCATGTTGTATGCAGTACCCTATCTTA | + |
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Preference number: 1 (lower is better) Translates to: MKLDARTPRKQAGEC*LLASCPCCMQYPIL Trigger: TAAGATAGGGTACTGCATACAACATGGACATGAAGCCAGTAATCAACATTCTCCCGCTTGCTTTCTTGGAGTTCTTGCATCTAATTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CCA 90 bp | GAATTACATACAGACTACCTTGGCCCCACACTCTCAAAAATGGCCTaGCTAAGGGTATTTGTATTTGATCTTATCTCTTACAGAAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: ELHTDYLGPTLSKMA*LRVFVFDLISYRSK Trigger: TTTGCTTCTGTAAGAGATAAGATCAAATACAAATACCCTTAGCCAGGCCATTTTTGAGAGTGTGGGGCCAAGGTAGTCTGTATGTAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR TCA 90 bp | AGGGTATTTGTATTTGATCTTATCTCTTACAGAAGCAAAGCTCTCTaGTGGTGGCTGATCAAGATGCTGATTTTATGTCTAGCAGAATGT | + |
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Preference number: 1 (lower is better) Translates to: RVFVFDLISYRSKAL*WWLIKMLILCLAEC Trigger: ACATTCTGCTAGACATAAAATCAGCATCTTGATCAGCCACCATCAGAGAGCTTTGCTTCTGTAAGAGATAAGATCAAATACAAATACCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR GCA 90 bp | CAAATTGTAACCTTCATCACTCATGGCCATATCATAGTTGTGCAGTaGTGTCCATTCCAATGTGTTGTTGAATGTCATATGATCCATTTT | + |
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Preference number: 1 (lower is better) Translates to: QIVTFITHGHIIVVQ*CPFQCVVECHMIHF Trigger: AAAATGGATCATATGACATTCAACAACACATTGGAATGGACAGCACTGCACAACTATGATATGGCCATGAGTGATGAAGGTTACAATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCCCCTATACCCTCCCCATACCCTGCTTTCCAACCCACCAACTCCTGCTTCCGTGTGCACATGCGCATaGACGCGCGCGTGCGCGCGC | + |
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Preference number: 2 (lower is better) Translates to: SPLYPPHTLLSNPPTPASVCTCA*TRACAR Trigger: GCGCGCGCACGCGCGCGTGCATGCGCATGTGCACAC...GGAAGCAGGAGTTGGTGGGTTGGAAAGCAGGGTATGGGGAGGGTATAGGGGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCCCCTATACCCTCCCCATACCCTGCTTTCCAACCCACCAACTCCTGCTTCCCAACCCACCAACTCCTaGTTCCTGGCCCTGGCATTC | + |
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Preference number: 2 (lower is better) Translates to: SPLYPPHTLLSNPPTPASQPTNS*FLALAF Trigger: GAATGCCAGGGCCAGGAAGCAGGAGTTGGTGGGTTG...GGAAGCAGGAGTTGGTGGGTTGGAAAGCAGGGTATGGGGAGGGTATAGGGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATAAGAGTCAGATATATCAGGGCACGCGTGTGCACATaGGCATGCACGCGCGCGTGC | + |
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Preference number: 2 (lower is better) Translates to: TSVFARHWHSLIRVRYIRARVCT*ACTRAC Trigger: GCACGCGCGCGTGCATGCGCATGTGCACACGCGTGC...CCTGATATATCTGACTCTTATGAGGCTATGCCAGTGCCTGGCAAATACAGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTTCTAAGTTGCTCTGGACCTGTCACTCTGGTCACTCTCACTCGACCCCACCACTTATGTACCTACTaGACGCGTGTGCACATGCGC | + |
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Preference number: 2 (lower is better) Translates to: CLLSCSGPVTLVTLTRPHHLCTY*TRVHMR Trigger: GCGCATGTGCACACGCGTGCAGTAGGTACATAAGTG...GTGGGGTCGAGTGAGAGTGACCAGAGTGACAGGTCCAGAGCAACTTAGAAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGGATGGATCACTGGATGGGGAGTCTCTGCATGGTCCTTCCTTCCATCTCATCCTGCTTCCTGGCCCTaGCATTCTTCTGTATTGGGG | + |
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Preference number: 2 (lower is better) Translates to: MGWITGWGVSAWSFLPSHPASWP*HSSVLG Trigger: CCCCAATACAGAAGAATGCCAGGGCCAGGAAGCAGG...ATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CAA 90 bp | CCAACTCCTGCTTCCTGGCCCTGGCATTCTTCTGTATTGGGGCATTaGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTTGATGGCGGA | + |
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Preference number: 2 (lower is better) Translates to: PTPASWPWHSSVLGH*IFTRPSACPFFDGG Trigger: TCCGCCATCAAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAAATGCCCCAATACAGAAGAATGCCAGGGCCAGGAAGCAGGAGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | CATGGCTTAAGCACAAAACCACAAATCAAAATGATGGTAGCCATTCCTCAATTGGTGTGCACATGCGCATaGACGCGCGCGTGCGCGCGC | + |
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Preference number: 2 (lower is better) Translates to: HGLSTKPQIKMMVAIPQLVCTCA*TRACAR Trigger: GCGCGCGCACGCGCGCGTGCATGCGCATGTGCACAC...CAATTGAGGAATGGCTACCATCATTTTGATTTGTGGTTTTGTGCTTAAGCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCCCCTATACCCTCCCCATACCCTGCTTTCCAACCCACCAACTCCTGCTTCCCCTGCAGTAACCCTGTaGAATTACATACAGACTACC | + |
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Preference number: 2 (lower is better) Translates to: SPLYPPHTLLSNPPTPASPAVTL*NYIQTT Trigger: GGTAGTCTGTATGTAATTCCACAGGGTTACTGCAGG...GGAAGCAGGAGTTGGTGGGTTGGAAAGCAGGGTATGGGGAGGGTATAGGGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CAA 90 bp | TCCAACCCACCAACTCCTGCTTCCTGGCCCTGGCATTCTTCTGTATaGGGGCATTTGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: SNPPTPASWPWHSSV*GHLIFTRPSACPFF Trigger: AAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAAATGCCCCAATACAGAAGAATGCCAGGGCCAGGAAGCAGGAGTTGGTGGGTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR TCA 90 bp | TTGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTTGATGGCGGACAAGGCCATCCCACTGTGAGGTTGTaGTCCAGATTCTCCAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LIFTRPSACPFFDGGQGHPTVRL*SRFSKH Trigger: GTGCTTGGAGAATCTGGATCACAACCTCACAGTGGG...ATGGCCTTGTCCGCCATCAAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCTTCTAAGTTGCTCTGGACCTGTCACTCTGGTCACTCTCACTCGACCCCACGATGACATCCCACTGTaGGGTTGTGATCCAGATTCT | + |
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Preference number: 2 (lower is better) Translates to: CLLSCSGPVTLVTLTRPHDDIPL*GCDPDS Trigger: AGAATCTGGATCACAACCTCACAGTGGGATGTCATC...GTGGGGTCGAGTGAGAGTGACCAGAGTGACAGGTCCAGAGCAACTTAGAAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGACCCCTTCAGCTCCTTGGGAACTTTCTCTAGTTGCTTCATTCGGGGCCTGGGGAGTCTCTGCATaGTCCTTCCTTCCATCTCAT | + |
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Preference number: 2 (lower is better) Translates to: FQTPSAPWELSLVASFGAWGVSA*SFLPSH Trigger: ATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCA...GGCCCCGAATGAAGCAACTAGAGAAAGTTCCCAAGGAGCTGAAGGGGTCTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAATGACCAACTTAGGTGCCCCTGTCATCATCATCCCTCTTATTCTTCTTCCGGATGGATCACTGGATaGGGAGTCTCTGCATGGTCC | + |
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Preference number: 2 (lower is better) Translates to: GNDQLRCPCHHHPSYSSSGWITG*GVSAWS Trigger: GGACCATGCAGAGACTCCCCATCCAGTGATCCATCC...GGAAGAAGAATAAGAGGGATGATGATGACAGGGGCACCTAAGTTGGTCATTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | TTGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTTGATGGCGGACAAGGCCATTGGTTTGCTGCAAGATaGAGGAGACCTGGTTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: LIFTRPSACPFFDGGQGHWFAAR*RRPGWD Trigger: ATCCCAACCAGGTCTCCTGCATCTTGCAGCAAACCA...ATGGCCTTGTCCGCCATCAAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCTTTTTCACACCTGTCTGTGTGTTGAACTCCAGGGTCACTGGATGCCTCTTTGGTTTGCTGCAAGATaGAGGAGACCTGGTTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: QLFHTCLCVELQGHWMPLWFAAR*RRPGWD Trigger: ATCCCAACCAGGTCTCCTGCATCTTGCAGCAAACCA...AAGAGGCATCCAGTGACCCTGGAGTTCAACACACAGACAGGTGTGAAAAAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGGATGGATCACTGGATGGGGAGTCTCTGCATGGTCCTTCCTTCCATCTCATCCAAATATGGTTTGCTaGAAGATGCAGGAGACCTGG | + |
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Preference number: 2 (lower is better) Translates to: MGWITGWGVSAWSFLPSHPNMVC*KMQETW Trigger: CCAGGTCTCCTGCATCTTGCAGCAAACCATATTTGG...ATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCCCCTATACCCTCCCCATACCCTGCTTTCCAACCCACCAACTCCTGCTTCCTCTGTAACTCTTTCATaGGTATTGTGTTCCCCATTC | + |
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Preference number: 2 (lower is better) Translates to: SPLYPPHTLLSNPPTPASSVTLS*VLCSPF Trigger: GAATGGGGAACACAATACCCATGAAAGAGTTACAGA...GGAAGCAGGAGTTGGTGGGTTGGAAAGCAGGGTATGGGGAGGGTATAGGGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGGATGGATCACTGGATGGGGAGTCTCTGCATGGTCCTTCCTTCCATCTCATGTATTTGCCAGGCACTaGCATAGCCTCATAAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: MGWITGWGVSAWSFLPSHVFARH*HSLIRV Trigger: GACTCTTATGAGGCTATGCCAGTGCCTGGCAAATAC...ATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTTTTTCACACCTGTCTGTGTGTTGAACTCCAGGGTCACTGGATGCCTCTTAGAAGCAAAGCTCTCTaGTGGTGGCTGATCAAGATG | + |
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Preference number: 2 (lower is better) Translates to: QLFHTCLCVELQGHWMPLRSKAL*WWLIKM Trigger: CATCTTGATCAGCCACCATCAGAGAGCTTTGCTTCT...AAGAGGCATCCAGTGACCCTGGAGTTCAACACACAGACAGGTGTGAAAAAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTGTCTGTGTTTGGTGGTTGATTATGGGATGGATCACTGGATGGGGAGTCTCACCCTGGTCATCATCTaGGATGACCAGTCCTATCCA | + |
|
Preference number: 2 (lower is better) Translates to: LCLCLVVDYGMDHWMGSLTLVII*DDQSYP Trigger: TGGATAGGACTGGTCATCTCAGATGATGACCAGGGT...GAGACTCCCCATCCAGTGATCCATCCCATAATCAACCACCAAACACAGACACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCCCCTATACCCTCCCCATACCCTGCTTTCCAACCCACCAACTCCTGCTTCCTCATACTCTGTACACTaGTTTTCTCTATGCTTCATG | + |
|
Preference number: 2 (lower is better) Translates to: SPLYPPHTLLSNPPTPASSYSVH*FSLCFM Trigger: CATGAAGCATAGAGAAAATCAGTGTACAGAGTATGA...GGAAGCAGGAGTTGGTGGGTTGGAAAGCAGGGTATGGGGAGGGTATAGGGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGCTTTTTCACACCTGTCTGTGTGTTGAACTCCAGGGTCACTGGATGCCTCTTGGAACTTTCTCTAGTTaGTTCATTCGGGGCCATGTG | + |
|
Preference number: 2 (lower is better) Translates to: QLFHTCLCVELQGHWMPLGTFSS*FIRGHV Trigger: CACATGGCCCCGAATGAAGCAACTAGAGAAAGTTCC...AAGAGGCATCCAGTGACCCTGGAGTTCAACACACAGACAGGTGTGAAAAAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGGGATGGATCACTGGATGGGGAGTCTCTGCATGGTCCTTCCTTCCATCTCATACTCCAAATATGGTTTaGTGCAAGATGCAGGAGACC | + |
|
Preference number: 2 (lower is better) Translates to: MGWITGWGVSAWSFLPSHTPNMV*CKMQET Trigger: GGTCTCCTGCATCTTGCAGCAAACCATATTTGGAGT...ATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGGATGGATCACTGGATGGGGAGTCTCTGCATGGTCCTTCCTTCCATCTCATCAGTGTGCTTATAGGTaGCACTGTTCACAGACAGTA | + |
|
Preference number: 2 (lower is better) Translates to: MGWITGWGVSAWSFLPSHQCAYR*HCSQTV Trigger: TACTGTCTGTGAACAGTGCCACCTATAAGCACACTG...ATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGGATGGATCACTGGATGGGGAGTCTCTGCATGGTCCTTCCTTCCATCTCATCCTGCAGTAACCCTGTaGAATTACATACAGACTACC | + |
|
Preference number: 2 (lower is better) Translates to: MGWITGWGVSAWSFLPSHPAVTL*NYIQTT Trigger: GGTAGTCTGTATGTAATTCCACAGGGTTACTGCAGG...ATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTATTGGGGCATTTGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTTGATGGATGGATCACTGGATaGGGAGTCTCTGCATGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: SVLGHLIFTRPSACPFFDGWITG*GVSAWS Trigger: GGACCATGCAGAGACTCCCCATCCAGTGATCCATCC...ATCAAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAAATGCCCCAATACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATAAGAGTCAGATATATCAGGCCTGCTTCCTGGCCCTaGCATTCTTCTGTATTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: TSVFARHWHSLIRVRYIRPASWP*HSSVLG Trigger: CCCCAATACAGAAGAATGCCAGGGCCAGGAAGCAGG...CCTGATATATCTGACTCTTATGAGGCTATGCCAGTGCCTGGCAAATACAGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CAA 90 bp | TTCTGCTCCTCTACCCATGTCAGCTTTTTCACACCTGTCTGTGTGTaGAACTCCAGGGTCACTGGATGCCTCTTTAGTGCAGATTCATTG | + |
|
Preference number: 2 (lower is better) Translates to: FCSSTHVSFFTPVCV*NSRVTGCLFSADSL Trigger: CAATGAATCTGCACTAAAGAGGCATCCAGTGACCCTGGAGTTCAACACACAGACAGGTGTGAAAAAGCTGACATGGGTAGAGGAGCAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR TCA 90 bp | ACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATAAGAGTCAGATATATCAGGCACCTGTCTGTGTGTTaGACTCCAGGGTCACTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: TSVFARHWHSLIRVRYIRHLSVC*TPGSLD Trigger: ATCCAGTGACCCTGGAGTTCAACACACAGACAGGTG...CCTGATATATCTGACTCTTATGAGGCTATGCCAGTGCCTGGCAAATACAGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGGGATGGATCACTGGATGGGGAGTCTCTGCATGGTCCTTCCTTCCATCTCATTCATTTTCTGGGCATTaGACACAATCAAAGCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: MGWITGWGVSAWSFLPSHSFSGH*TQSKQQ Trigger: CTGCTGCTTTGATTGTGTTCAATGCCCAGAAAATGA...ATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCTTAAGCACAAAACCACAAATCAAAATGATGGTAGCCATTCCTCAATTGGGCAACCCACCAACTCCTaGTTCCTGGCCCTGGCATTC | + |
|
Preference number: 2 (lower is better) Translates to: WLKHKTTNQNDGSHSSIGQPTNS*FLALAF Trigger: GAATGCCAGGGCCAGGAAGCAGGAGTTGGTGGGTTG...CCCAATTGAGGAATGGCTACCATCATTTTGATTTGTGGTTTTGTGCTTAAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGTATTGGGGCATTTGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTTGATCACTTATGTACCTACTaGACGCGTGTGCACATGCGC | + |
|
Preference number: 2 (lower is better) Translates to: SVLGHLIFTRPSACPFFDHLCTY*TRVHMR Trigger: GCGCATGTGCACACGCGTGCAGTAGGTACATAAGTG...ATCAAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAAATGCCCCAATACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCAGACCCCTTCAGCTCCTTGGGAACTTTCTCTAGTTGCTTCATTCGGGGCCCTCAACTTTGTGGTGTaGAAAAGTGATAGTGCCATG | + |
|
Preference number: 2 (lower is better) Translates to: FQTPSAPWELSLVASFGALNFVV*KSDSAM Trigger: CATGGCACTATCACTTTTGCACACCACAAAGTTGAG...GGCCCCGAATGAAGCAACTAGAGAAAGTTCCCAAGGAGCTGAAGGGGTCTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATAAGAGTCAGATATATCAGGTCAGTTGTTGGAGCCTaGCCTCCCCTTTCACTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: TSVFARHWHSLIRVRYIRSVVGA*PPLSLS Trigger: AGAGAGTGAAAGGGGAGGCCAGGCTCCAACAACTGA...CCTGATATATCTGACTCTTATGAGGCTATGCCAGTGCCTGGCAAATACAGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTTCTAAGTTGCTCTGGACCTGTCACTCTGGTCACTCTCACTCGACCCCACCAGATCTCATGCCTTTaGCTCTCTTCTCTTAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: CLLSCSGPVTLVTLTRPHQISCL*LSSLKS Trigger: AGATTTAAGAGAAGAGAGCCAAAGGCATGAGATCTG...GTGGGGTCGAGTGAGAGTGACCAGAGTGACAGGTCCAGAGCAACTTAGAAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CAA 90 bp | TCATATTGCTGTTCCTCTTATAGGGTTTCAGACCCCTTCAGCTCCTaGGGAACTTTCTCTAGTTGCTTCATTCGGGGCCATGTGTTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: SYCCSSYRVSDPFSS*GTFSSCFIRGHVFH Trigger: ATGGAACACATGGCCCCGAATGAAGCAACTAGAGAAAGTTCCCAAGGAGCTGAAGGGGTCTGAAACCCTATAAGAGGAACAGCAATATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CAA 90 bp | AAAAATACTCCAAATATGGTTTGCTGCAAGATGCAGGAGACCTGGTaGGGATGTCCAATGAAGAGCAGGGAGCAGAGAAAGCAGAAGACG | + |
|
Preference number: 2 (lower is better) Translates to: KNTPNMVCCKMQETW*GCPMKSREQRKQKT Trigger: CGTCTTCTGCTTTCTCTGCTCCCTGCTCTTCATTGGACATCCCAACCAGGTCTCCTGCATCTTGCAGCAAACCATATTTGGAGTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCAGACCCCTTCAGCTCCTTGGGAACTTTCTCTAGTTGCTTCATTCGGGGCCACTTTGAGAGAAAAATaGAACTGGCCATCATCACCT | + |
|
Preference number: 2 (lower is better) Translates to: FQTPSAPWELSLVASFGATLREK*NWPSSP Trigger: AGGTGATGATGGCCAGTTTCATTTTTCTCTCAAAGT...GGCCCCGAATGAAGCAACTAGAGAAAGTTCCCAAGGAGCTGAAGGGGTCTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR TCA 90 bp | TTGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTTGATGGCGGACAAGGCCATCCTGCTGACAAGCAGTaGAATATCTTTTGGGTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LIFTRPSACPFFDGGQGHPADKQ*NIFWVL Trigger: CAAAACCCAAAAGATATTTCACTGCTTGTCAGCAGG...ATGGCCTTGTCCGCCATCAAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTTCTAAGTTGCTCTGGACCTGTCACTCTGGTCACTCTCACTCGACCCCACGAGAATGTTGATTACTaGCTTCATGTCCATGTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: CLLSCSGPVTLVTLTRPHENVDY*LHVHVV Trigger: TACAACATGGACATGAAGCCAGTAATCAACATTCTC...GTGGGGTCGAGTGAGAGTGACCAGAGTGACAGGTCCAGAGCAACTTAGAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTTTTTCACACCTGTCTGTGTGTTGAACTCCAGGGTCACTGGATGCCTCTTGGTGAAGGTCTTGTGTaGGACATTTCCATTAGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: QLFHTCLCVELQGHWMPLGEGLV*DISISD Trigger: ATCACTAATGGAAATGTCCCACACAAGACCTTCACC...AAGAGGCATCCAGTGACCCTGGAGTTCAACACACAGACAGGTGTGAAAAAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTATTGGGGCATTTGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTTGATTGGGGAGTCTCTGCATaGTCCTTCCTTCCATCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: SVLGHLIFTRPSACPFFDWGVSA*SFLPSH Trigger: ATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCA...ATCAAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAAATGCCCCAATACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCTGAGGTTACTGGTTAGTTCATATTGCTGTTCCTCTTATAGGGTTTCAGACGGATGGATCACTGGATaGGGAGTCTCTGCATGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: VLRLLVSSYCCSSYRVSDGWITG*GVSAWS Trigger: GGACCATGCAGAGACTCCCCATCCAGTGATCCATCC...GTCTGAAACCCTATAAGAGGAACAGCAATATGAACTAACCAGTAACCTCAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | TTGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTTGATGGCGGACAAGGCCATAGTTGTGTCTGTGTTTaGTGGTTGATTATGGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: LIFTRPSACPFFDGGQGHSCVCV*WLIMGW Trigger: CCATCCCATAATCAACCACCAAACACAGACACAACT...ATGGCCTTGTCCGCCATCAAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | TTGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTTGATGGCGGACAAGGCCATACAAATGTGTGTCCTTaGTGGCTACTTGATGGACAT | + |
|
Preference number: 2 (lower is better) Translates to: LIFTRPSACPFFDGGQGHTNVCP*WLLDGH Trigger: ATGTCCATCAAGTAGCCACCAAGGACACACATTTGT...ATGGCCTTGTCCGCCATCAAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233504.2 |
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| 3UTR CAA 90 bp | GCCAGAAATGATACAGCTCTTGAGAGGCAGTGGGTTTGCTCTATGTaGGCATACTTATCATCTGGACACCTCACACACTGTTCCATATCT | + |
|
Preference number: 2 (lower is better) Translates to: ARNDTALERQWVCSM*AYLSSGHLTHCSIS Trigger: AGATATGGAACAGTGTGTGAGGTGTCCAGATGATAAGTATGCCAACATAGAGCAAACCCACTGCCTCTCAAGAGCTGTATCATTTCTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CAA 90 bp | GAGCCATCCCCAATGGATCTTCATAAGCCAGAAATGATACAGCTCTaGAGAGGCAGTGGGTTTGCTCTATGTTGGCATACTTATCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: EPSPMDLHKPEMIQL*RGSGFALCWHTYHL Trigger: CAGATGATAAGTATGCCAACATAGAGCAAACCCACTGCCTCTCAAGAGCTGTATCATTTCTGGCTTATGAAGATCCATTGGGGATGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CAA 90 bp | CCCAAGTATCCCAGGACAACGTGGAAGGCAATGACAGAGCCTTTATaGCAAAGAATGACAGTCTTCCCATGCTCTGATTGTATATCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: PKYPRTTWKAMTEPL*QRMTVFPCSDCISL Trigger: CAGAGATATACAATCAGAGCATGGGAAGACTGTCATTCTTTGCAATAAAGGCTCTGTCATTGCCTTCCACGTTGTCCTGGGATACTTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGTATTGGGGCATTTGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTTGATAGAAGCAAAGCTCTCTaGTGGTGGCTGATCAAGATG | + |
|
Preference number: 2 (lower is better) Translates to: SVLGHLIFTRPSACPFFDRSKAL*WWLIKM Trigger: CATCTTGATCAGCCACCATCAGAGAGCTTTGCTTCT...ATCAAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAAATGCCCCAATACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGATTGTATATCTCTGTCAATAAAGGGAGGAGATGTGACCAACCAGATTCCAGGTTGGGATGTCCAATaGAGAGCAGGGAGCAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SDCISLSIKGGDVTNQIPGWDVQ*RAGSRE Trigger: TTCTCTGCTCCCTGCTCTTCATTGGACATCCCAACC...TGGAATCTGGTTGGTCACATCTCCTCCCTTTATTGACAGAGATATACAATCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR TCA 90 bp | ACAATTAGTGTGTGTGCATTTTTAGACTTCACCAGCAGAAGCTGTTTTGGTGCTGGTTGGGATGTCCAATaGAGAGCAGGGAGCAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TISVCAFLDFTSRSCFGAGWDVQ*RAGSRE Trigger: TTCTCTGCTCCCTGCTCTTCATTGGACATCCCAACC...AGCACCAAAACAGCTTCTGCTGGTGAAGTCTAAAAATGCACACACACTAATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCTGAGGTTACTGGTTAGTTCATATTGCTGTTCCTCTTATAGGGTTTCAGACTGGATGGGGAGTCTCTaGATGGTCCTTCCTTCCATC | + |
|
Preference number: 2 (lower is better) Translates to: VLRLLVSSYCCSSYRVSDWMGSL*MVLPSI Trigger: GATGGAAGGAAGGACCATGCAGAGACTCCCCATCCA...GTCTGAAACCCTATAAGAGGAACAGCAATATGAACTAACCAGTAACCTCAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | ACAATTAGTGTGTGTGCATTTTTAGACTTCACCAGCAGAAGCTGTTTTGGTGCTTGGATGGGGAGTCTCTaGATGGTCCTTCCTTCCATC | + |
|
Preference number: 2 (lower is better) Translates to: TISVCAFLDFTSRSCFGAWMGSL*MVLPSI Trigger: GATGGAAGGAAGGACCATGCAGAGACTCCCCATCCA...AGCACCAAAACAGCTTCTGCTGGTGAAGTCTAAAAATGCACACACACTAATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCAGACCCCTTCAGCTCCTTGGGAACTTTCTCTAGTTGCTTCATTCGGGGCCAATATTGTTGGCATATaGAGTTGTGTCTGTGTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: FQTPSAPWELSLVASFGANIVGI*SCVCVW Trigger: CCAAACACAGACACAACTGCATATGCCAACAATATT...GGCCCCGAATGAAGCAACTAGAGAAAGTTCCCAAGGAGCTGAAGGGGTCTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAATGACCAACTTAGGTGCCCCTGTCATCATCATCCCTCTTATTCTTCTTCCGCTAAACAGATCTCATaGCTTTGGCTCTCTTCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: GNDQLRCPCHHHPSYSSSAKQIS*LWLSSL Trigger: AAGAGAAGAGAGCCAAAGGCATGAGATCTGTTTAGC...GGAAGAAGAATAAGAGGGATGATGATGACAGGGGCACCTAAGTTGGTCATTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGAATGACCAACTTAGGTGCCCCTGTCATCATCATCCCTCTTATTCTTCTTCCAGTTGTGTCTGTGTTTaGTGGTTGATTATGGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: GNDQLRCPCHHHPSYSSSSCVCV*WLIMGW Trigger: CCATCCCATAATCAACCACCAAACACAGACACAACT...GGAAGAAGAATAAGAGGGATGATGATGACAGGGGCACCTAAGTTGGTCATTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATAAGAGTCAGATATATCAGGGTATTTGCCAGGCACTaGCATAGCCTCATAAGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TSVFARHWHSLIRVRYIRVFARH*HSLIRV Trigger: GACTCTTATGAGGCTATGCCAGTGCCTGGCAAATAC...CCTGATATATCTGACTCTTATGAGGCTATGCCAGTGCCTGGCAAATACAGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTGTATTGGGGCATTTGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTTGATGTATTTGCCAGGCACTaGCATAGCCTCATAAGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SVLGHLIFTRPSACPFFDVFARH*HSLIRV Trigger: GACTCTTATGAGGCTATGCCAGTGCCTGGCAAATAC...ATCAAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAAATGCCCCAATACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAATTAGTGTGTGTGCATTTTTAGACTTCACCAGCAGAAGCTGTTTTGGTGCTCCCATGCTGAATATCTaGGTTCTGCTCCTCTACCCA | + |
|
Preference number: 2 (lower is better) Translates to: TISVCAFLDFTSRSCFGAPMLNI*VLLLYP Trigger: TGGGTAGAGGAGCAGAACTCAGATATTCAGCATGGG...AGCACCAAAACAGCTTCTGCTGGTGAAGTCTAAAAATGCACACACACTAATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTTAAGCACAAAACCACAAATCAAAATGATGGTAGCCATTCCTCAATTGGGACCCTGGTCATCATCTaGGATGACCAGTCCTATCCA | + |
|
Preference number: 2 (lower is better) Translates to: WLKHKTTNQNDGSHSSIGTLVII*DDQSYP Trigger: TGGATAGGACTGGTCATCTCAGATGATGACCAGGGT...CCCAATTGAGGAATGGCTACCATCATTTTGATTTGTGGTTTTGTGCTTAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGCATTTTAAGAGGGCAGGGAGGGATACAAAAGGTGTTCTGAAGACAGGAAGTCCTGCTGACAAGCAGTaGAATATCTTTTGGGTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: VHFKRAGRDTKGVLKTGSPADKQ*NIFWVL Trigger: CAAAACCCAAAAGATATTTCACTGCTTGTCAGCAGG...ACTTCCTGTCTTCAGAACACCTTTTGTATCCCTCCCTGCCCTCTTAAAATGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGCATTTTAAGAGGGCAGGGAGGGATACAAAAGGTGTTCTGAAGACAGGAAGTGACAGTTTCCACCAATaGTGGAGAACATCAAAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: VHFKRAGRDTKGVLKTGSDSFHQ*WRTSKS Trigger: TGACTTTGATGTTCTCCATCATTGGTGGAAACTGTC...ACTTCCTGTCTTCAGAACACCTTTTGTATCCCTCCCTGCCCTCTTAAAATGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233504.2 |
||
| 3UTR-3UTR GCA 90 bp | GGATGCCTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTTGGATGGGGAGTCTCTaGATGGTCCTTCCTTCCATC | + |
|
Preference number: 2 (lower is better) Translates to: GCLFSADSLYTHTSTYVPWMGSL*MVLPSI Trigger: GATGGAAGGAAGGACCATGCAGAGACTCCCCATCCA...AGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAGGCATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTTTCTCTAGTTGCTTCATTCGGGGCCATGTGTTCCATCCAATAGATGACTCTCAGTGTGCTTATAGGTaGCACTGTTCACAGACAGTA | + |
|
Preference number: 2 (lower is better) Translates to: TFSSCFIRGHVFHPIDDSQCAYR*HCSQTV Trigger: TACTGTCTGTGAACAGTGCCACCTATAAGCACACTG...AGAGTCATCTATTGGATGGAACACATGGCCCCGAATGAAGCAACTAGAGAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCAGACCCCTTCAGCTCCTTGGGAACTTTCTCTAGTTGCTTCATTCGGGGCCCTGGCCATCATCACCTaGTATAAAGAAATAATAATG | + |
|
Preference number: 2 (lower is better) Translates to: FQTPSAPWELSLVASFGALAIIT*YKEIIM Trigger: CATTATTATTTCTTTATACCAGGTGATGATGGCCAG...GGCCCCGAATGAAGCAACTAGAGAAAGTTCCCAAGGAGCTGAAGGGGTCTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAATTAGTGTGTGTGCATTTTTAGACTTCACCAGCAGAAGCTGTTTTGGTGCTTGGGGAGTCTCTGCATaGTCCTTCCTTCCATCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: TISVCAFLDFTSRSCFGAWGVSA*SFLPSH Trigger: ATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCA...AGCACCAAAACAGCTTCTGCTGGTGAAGTCTAAAAATGCACACACACTAATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR CAA 90 bp | CCTGTCATCATCATCCCTCTTATTCTTCTTCCTGGAGTAGTGAGCTaGAAAGCCATGACCACAGTTATTGTTTTGGCCAACACTGTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: PVIIIPLILLPGVVS*KAMTTVIVLANTVE Trigger: TTCTACAGTGTTGGCCAAAACAATAACTGTGGTCATGGCTTTCAAGCTCACTACTCCAGGAAGAAGAATAAGAGGGATGATGATGACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR TCA 90 bp | GATCTAAATATGGTGAAGGTCTTGTGTGGGACATTTCCATTAGTGATTTACTCACCCACTGTGAGGTTGTaGTCCAGATTCTCCAAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: DLNMVKVLCGTFPLVIYSPTVRL*SRFSKH Trigger: GTGCTTGGAGAATCTGGATCACAACCTCACAGTGGG...TGAGTAAATCACTAATGGAAATGTCCCACACAAGACCTTCACCATATTTAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTGATTGTATATCTCTGTCAATAAAGGGAGGAGATGTGACCAACCAGATTCCAGATGACATCCCACTGTaGGGTTGTGATCCAGATTCT | + |
|
Preference number: 2 (lower is better) Translates to: SDCISLSIKGGDVTNQIPDDIPL*GCDPDS Trigger: AGAATCTGGATCACAACCTCACAGTGGGATGTCATC...TGGAATCTGGTTGGTCACATCTCCTCCCTTTATTGACAGAGATATACAATCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGTGTCTGTGTTTGGTGGTTGATTATGGGATGGATCACTGGATGGGGAGTCTCAGGCATGAAATTAGATaGAAGAACTCCAAGAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LCLCLVVDYGMDHWMGSLRHEIR*KNSKKA Trigger: TGCTTTCTTGGAGTTCTTGCATCTAATTTCATGCCT...GAGACTCCCCATCCAGTGATCCATCCCATAATCAACCACCAAACACAGACACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTTTCTCTAGTTGCTTCATTCGGGGCCATGTGTTCCATCCAATAGATGACTCTAAAGTTCAGCGCTTCTaGACTGTCATATGCATAGAG | + |
|
Preference number: 2 (lower is better) Translates to: TFSSCFIRGHVFHPIDDSKVQRF*TVICIE Trigger: CTCTATGCATATGACAGTGCAGAAGCGCTGAACTTT...AGAGTCATCTATTGGATGGAACACATGGCCCCGAATGAAGCAACTAGAGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAGGAACCCAAGTATCCCAGGACAACGTGGAAGGCAATGACAGAGCCTTTATTAATATTGTTGGCATATaGAGTTGTGTCTGTGTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: QGTQVSQDNVEGNDRAFINIVGI*SCVCVW Trigger: CCAAACACAGACACAACTGCATATGCCAACAATATT...AATAAAGGCTCTGTCATTGCCTTCCACGTTGTCCTGGGATACTTGGGTTCCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGAATGACCAACTTAGGTGCCCCTGTCATCATCATCCCTCTTATTCTTCTTCCGAGAATGTTGATTACTaGCTTCATGTCCATGTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: GNDQLRCPCHHHPSYSSSENVDY*LHVHVV Trigger: TACAACATGGACATGAAGCCAGTAATCAACATTCTC...GGAAGAAGAATAAGAGGGATGATGATGACAGGGGCACCTAAGTTGGTCATTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATAAGAGTCAGATATATCAGGACATACAGACTACCTTaGCCCCACACTCTCAAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: TSVFARHWHSLIRVRYIRTYRLP*PHTLKN Trigger: ATTTTTGAGAGTGTGGGGCCAAGGTAGTCTGTATGT...CCTGATATATCTGACTCTTATGAGGCTATGCCAGTGCCTGGCAAATACAGAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATAAGAGTCAGATATATCAGGTGTGTCTGTGTTTGGTaGTTGATTATGGGATGGATC | + |
|
Preference number: 2 (lower is better) Translates to: TSVFARHWHSLIRVRYIRCVCVW*LIMGWI Trigger: GATCCATCCCATAATCAACCACCAAACACAGACACA...CCTGATATATCTGACTCTTATGAGGCTATGCCAGTGCCTGGCAAATACAGAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTGTCTGTGTTTGGTGGTTGATTATGGGATGGATCACTGGATGGGGAGTCTCGGAAACCTCATTTTCTaGGCATTGAACACAATCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LCLCLVVDYGMDHWMGSLGNLIF*ALNTIK Trigger: TTTGATTGTGTTCAATGCCCAGAAAATGAGGTTTCC...GAGACTCCCCATCCAGTGATCCATCCCATAATCAACCACCAAACACAGACACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CAA 90 bp | AGATATATCAGGGTCCCTTCTGCAAAATATTGTTGGCATATGCAGTaGTGTCTGTGTTTGGTGGTTGATTATGGGATGGATCACTGGATG | + |
|
Preference number: 2 (lower is better) Translates to: RYIRVPSAKYCWHMQ*CLCLVVDYGMDHWM Trigger: CATCCAGTGATCCATCCCATAATCAACCACCAAACACAGACACAACTGCATATGCCAACAATATTTTGCAGAAGGGACCCTGATATATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR TCA 90 bp | GGATGCCTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTAAGCTGTTTTGGTGCTaGATCAGTGAGTGTGACCTC | + |
|
Preference number: 2 (lower is better) Translates to: GCLFSADSLYTHTSTYVPKLFWC*ISECDL Trigger: GAGGTCACACTCACTGATTCAGCACCAAAACAGCTT...AGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAGGCATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCCGCAGCATAAACAGCATTATACAAATTGTAACCTTCATCACTCATGGCCAATCATAGTTGTGCAGTaGTGTCCATTCCAATGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: GPQHKQHYTNCNLHHSWPIIVVQ*CPFQCV Trigger: AACACATTGGAATGGACAGCACTGCACAACTATGAT...TGGCCATGAGTGATGAAGGTTACAATTTGTATAATGCTGTTTATGCTGCGGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGTATTGGGGCATTTGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTTGATATCATAGTTGTGCAGTaGTGTCCATTCCAATGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SVLGHLIFTRPSACPFFDIIVVQ*CPFQCV Trigger: AACACATTGGAATGGACAGCACTGCACAACTATGAT...ATCAAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAAATGCCCCAATACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | CAACTTAGGTGCCCCTGTCATCATCATCCCTCTTATTCTTCTTCCTGGAGTAGTCTCATATTCACTTGCTaGAATTCTAACAGAGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: QLRCPCHHHPSYSSSWSSLIFTC*NSNREG Trigger: TCCTTCTCTGTTAGAATTGCAGCAAGTGAATATGAG...ACTACTCCAGGAAGAAGAATAAGAGGGATGATGATGACAGGGGCACCTAAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCTGAGGTTACTGGTTAGTTCATATTGCTGTTCCTCTTATAGGGTTTCAGACCAGTGTGCTTATAGGTaGCACTGTTCACAGACAGTA | + |
|
Preference number: 2 (lower is better) Translates to: VLRLLVSSYCCSSYRVSDQCAYR*HCSQTV Trigger: TACTGTCTGTGAACAGTGCCACCTATAAGCACACTG...GTCTGAAACCCTATAAGAGGAACAGCAATATGAACTAACCAGTAACCTCAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | TTCATCACTCATGGCCATATCATAGTTGTGCAGTGCTGTCCATTCCAATGTGTTGGTGAAGGTCTTGTGTaGGACATTTCCATTAGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: FITHGHIIVVQCCPFQCVGEGLV*DISISD Trigger: ATCACTAATGGAAATGTCCCACACAAGACCTTCACC...AACACATTGGAATGGACAGCACTGCACAACTATGATATGGCCATGAGTGATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTGTCTGTGTTTGGTGGTTGATTATGGGATGGATCACTGGATGGGGAGTCTCGGAAGTAAAAACAAATaGCAACTATATGACAGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: LCLCLVVDYGMDHWMGSLGSKNK*QLYDSV Trigger: GACACTGTCATATAGTTGCCATTTGTTTTTACTTCC...GAGACTCCCCATCCAGTGATCCATCCCATAATCAACCACCAAACACAGACACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CAA 90 bp | CTGTTCCATATCTGCTGTTTCATTGGAAACCTCATTTTCTGGGCATaGAACACAATCAAAGCAGCAGTCTGCTGTTTCTTCCTGATGAAT | + |
|
Preference number: 2 (lower is better) Translates to: LFHICCFIGNLIFWA*NTIKAAVCCFFLMN Trigger: ATTCATCAGGAAGAAACAGCAGACTGCTGCTTTGATTGTGTTCAATGCCCAGAAAATGAGGTTTCCAATGAAACAGCAGATATGGAACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR TCA 90 bp | GGATGCCTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTTCTGTGTTTGGTGGTTaGTTATGGGATGGATCACTG | + |
|
Preference number: 2 (lower is better) Translates to: GCLFSADSLYTHTSTYVPSVFGG*LWDGSL Trigger: CAGTGATCCATCCCATAATCAACCACCAAACACAGA...AGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAGGCATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCTGAGGTTACTGGTTAGTTCATATTGCTGTTCCTCTTATAGGGTTTCAGACTCATTTTCTGGGCATTaGACACAATCAAAGCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: VLRLLVSSYCCSSYRVSDSFSGH*TQSKQQ Trigger: CTGCTGCTTTGATTGTGTTCAATGCCCAGAAAATGA...GTCTGAAACCCTATAAGAGGAACAGCAATATGAACTAACCAGTAACCTCAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCATTTTAAGAGGGCAGGGAGGGATACAAAAGGTGTTCTGAAGACAGGAAGTCATGTCCATGTTGTATaGAGTACCCTATCTTATAAA | + |
|
Preference number: 2 (lower is better) Translates to: VHFKRAGRDTKGVLKTGSHVHVV*STLSYK Trigger: TTTATAAGATAGGGTACTGCATACAACATGGACATG...ACTTCCTGTCTTCAGAACACCTTTTGTATCCCTCCCTGCCCTCTTAAAATGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTTCTCTAGTTGCTTCATTCGGGGCCATGTGTTCCATCCAATAGATGACTCTAGGCATGAAATTAGATaGAAGAACTCCAAGAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: TFSSCFIRGHVFHPIDDSRHEIR*KNSKKA Trigger: TGCTTTCTTGGAGTTCTTGCATCTAATTTCATGCCT...AGAGTCATCTATTGGATGGAACACATGGCCCCGAATGAAGCAACTAGAGAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | ACAATTAGTGTGTGTGCATTTTTAGACTTCACCAGCAGAAGCTGTTTTGGTGCTAAAGTTCAGCGCTTCTaGACTGTCATATGCATAGAG | + |
|
Preference number: 2 (lower is better) Translates to: TISVCAFLDFTSRSCFGAKVQRF*TVICIE Trigger: CTCTATGCATATGACAGTGCAGAAGCGCTGAACTTT...AGCACCAAAACAGCTTCTGCTGGTGAAGTCTAAAAATGCACACACACTAATTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCTGAGGTTACTGGTTAGTTCATATTGCTGTTCCTCTTATAGGGTTTCAGACGCTAAACAGATCTCATaGCTTTGGCTCTCTTCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: VLRLLVSSYCCSSYRVSDAKQIS*LWLSSL Trigger: AAGAGAAGAGAGCCAAAGGCATGAGATCTGTTTAGC...GTCTGAAACCCTATAAGAGGAACAGCAATATGAACTAACCAGTAACCTCAGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CCA 90 bp | TTCATCACTCATGGCCATATCATAGTTGTGCAGTGCTGTCCATTCCAATGTGTTCAGATCTCATGCCTTTaGCTCTCTTCTCTTAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: FITHGHIIVVQCCPFQCVQISCL*LSSLKS Trigger: AGATTTAAGAGAAGAGAGCCAAAGGCATGAGATCTG...AACACATTGGAATGGACAGCACTGCACAACTATGATATGGCCATGAGTGATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTAAGCACAAAACCACAAATCAAAATGATGGTAGCCATTCCTCAATTGGGACTTTGAGAGAAAAATaGAACTGGCCATCATCACCT | + |
|
Preference number: 2 (lower is better) Translates to: WLKHKTTNQNDGSHSSIGTLREK*NWPSSP Trigger: AGGTGATGATGGCCAGTTTCATTTTTCTCTCAAAGT...CCCAATTGAGGAATGGCTACCATCATTTTGATTTGTGGTTTTGTGCTTAAGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGATTGTATATCTCTGTCAATAAAGGGAGGAGATGTGACCAACCAGATTCCACAAGTCCATCTAAAATaGAACATCAAGGAGACCATG | + |
|
Preference number: 2 (lower is better) Translates to: SDCISLSIKGGDVTNQIPQVHLK*NIKETM Trigger: CATGGTCTCCTTGATGTTTCATTTTAGATGGACTTG...TGGAATCTGGTTGGTCACATCTCCTCCCTTTATTGACAGAGATATACAATCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAATTAGTGTGTGTGCATTTTTAGACTTCACCAGCAGAAGCTGTTTTGGTGCTCAAGTCCATCTAAAATaGAACATCAAGGAGACCATG | + |
|
Preference number: 2 (lower is better) Translates to: TISVCAFLDFTSRSCFGAQVHLK*NIKETM Trigger: CATGGTCTCCTTGATGTTTCATTTTAGATGGACTTG...AGCACCAAAACAGCTTCTGCTGGTGAAGTCTAAAAATGCACACACACTAATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTCTTCCCATGCTCTGATTGTATATCTCTGTCAATAAAGGGAGGAGATGTGTCATACTCTGTACACTaGTTTTCTCTATGCTTCATG | + |
|
Preference number: 2 (lower is better) Translates to: TVFPCSDCISLSIKGGDVSYSVH*FSLCFM Trigger: CATGAAGCATAGAGAAAATCAGTGTACAGAGTATGA...CACATCTCCTCCCTTTATTGACAGAGATATACAATCAGAGCATGGGAAGACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTACTGACATACAGACTACCTTaGCCCCACACTCTCAAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: ASLVQIHCIHIQALMYLLTYRLP*PHTLKN Trigger: ATTTTTGAGAGTGTGGGGCCAAGGTAGTCTGTATGT...CAGTAGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTACTGTGTGTCTGTGTTTGGTaGTTGATTATGGGATGGATC | + |
|
Preference number: 2 (lower is better) Translates to: ASLVQIHCIHIQALMYLLCVCVW*LIMGWI Trigger: GATCCATCCCATAATCAACCACCAAACACAGACACA...CAGTAGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTTTCTCTAGTTGCTTCATTCGGGGCCATGTGTTCCATCCAATAGATGACTCTAAAGTGATAGTGCCATaGAAGAGATTAAAGGTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: TFSSCFIRGHVFHPIDDSKVIVP*KRLKVN Trigger: ATTCACCTTTAATCTCTTCCATGGCACTATCACTTT...AGAGTCATCTATTGGATGGAACACATGGCCCCGAATGAAGCAACTAGAGAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAGTCTTCCCATGCTCTGATTGTATATCTCTGTCAATAAAGGGAGGAGATGTGGGAAACCTCATTTTCTaGGCATTGAACACAATCAAA | + |
|
Preference number: 2 (lower is better) Translates to: TVFPCSDCISLSIKGGDVGNLIF*ALNTIK Trigger: TTTGATTGTGTTCAATGCCCAGAAAATGAGGTTTCC...CACATCTCCTCCCTTTATTGACAGAGATATACAATCAGAGCATGGGAAGACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR TCA 90 bp | GGATGCCTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTACTTTGAGAGAAAAATaGAACTGGCCATCATCACCT | + |
|
Preference number: 2 (lower is better) Translates to: GCLFSADSLYTHTSTYVPTLREK*NWPSSP Trigger: AGGTGATGATGGCCAGTTTCATTTTTCTCTCAAAGT...AGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAGGCATCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAATTAGTGTGTGTGCATTTTTAGACTTCACCAGCAGAAGCTGTTTTGGTGCTAGAAGGATAATAATGTaGAGCAACCATCACTATCAG | + |
|
Preference number: 2 (lower is better) Translates to: TISVCAFLDFTSRSCFGARRIIM*SNHHYQ Trigger: CTGATAGTGATGGTTGCTTCACATTATTATCCTTCT...AGCACCAAAACAGCTTCTGCTGGTGAAGTCTAAAAATGCACACACACTAATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233504.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAGTCTTCCCATGCTCTGATTGTATATCTCTGTCAATAAAGGGAGGAGATGTGCATGTCCATGTTGTATaGAGTACCCTATCTTATAAA | + |
|
Preference number: 2 (lower is better) Translates to: TVFPCSDCISLSIKGGDVHVHVV*STLSYK Trigger: TTTATAAGATAGGGTACTGCATACAACATGGACATG...CACATCTCCTCCCTTTATTGACAGAGATATACAATCAGAGCATGGGAAGACTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTTAAGCACAAAACCACAAATCAAAATGATGGTAGCCATTCCTCAATTGGGAATATTGTTGGCATATaGAGTTGTGTCTGTGTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: WLKHKTTNQNDGSHSSIGNIVGI*SCVCVW Trigger: CCAAACACAGACACAACTGCATATGCCAACAATATT...CCCAATTGAGGAATGGCTACCATCATTTTGATTTGTGGTTTTGTGCTTAAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR GCA 90 bp | GATCTAAATATGGTGAAGGTCTTGTGTGGGACATTTCCATTAGTGATTTACTCACTCAACTTTGTGGTGTaGAAAAGTGATAGTGCCATG | + |
|
Preference number: 2 (lower is better) Translates to: DLNMVKVLCGTFPLVIYSLNFVV*KSDSAM Trigger: CATGGCACTATCACTTTTGCACACCACAAAGTTGAG...TGAGTAAATCACTAATGGAAATGTCCCACACAAGACCTTCACCATATTTAGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTACTGCAACATACAGACTACCTTaGCCCCACACTCTCAAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: LFSADSLYTHTSTYVPTATYRLP*PHTLKN Trigger: ATTTTTGAGAGTGTGGGGCCAAGGTAGTCTGTATGT...TGCAGTAGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTACTGCATGTGTCTGTGTTTGGTaGTTGATTATGGGATGGATC | + |
|
Preference number: 2 (lower is better) Translates to: LFSADSLYTHTSTYVPTACVCVW*LIMGWI Trigger: GATCCATCCCATAATCAACCACCAAACACAGACACA...TGCAGTAGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCATCACTCATGGCCATATCATAGTTGTGCAGTGCTGTCCATTCCAATGTGTTAAAGTGATAGTGCCATaGAAGAGATTAAAGGTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: FITHGHIIVVQCCPFQCVKVIVP*KRLKVN Trigger: ATTCACCTTTAATCTCTTCCATGGCACTATCACTTT...AACACATTGGAATGGACAGCACTGCACAACTATGATATGGCCATGAGTGATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | GGATGCCTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTAACCTTCATCACTCATaGCCATATCATAGTTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: GCLFSADSLYTHTSTYVPNLHHS*PYHSCA Trigger: TGCACAACTATGATATGGCCATGAGTGATGAAGGTT...AGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAGGCATCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTTAAGCACAAAACCACAAATCAAAATGATGGTAGCCATTCCTCAATTGGGGATTCGAAAATACCCTaGTTTTCATCAAGGAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: WLKHKTTNQNDGSHSSIGDSKIP*FSSRKT Trigger: TGTCTTCCTTGATGAAAACCAGGGTATTTTCGAATC...CCCAATTGAGGAATGGCTACCATCATTTTGATTTGTGGTTTTGTGCTTAAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | CATGGCTTAAGCACAAAACCACAAATCAAAATGATGGTAGCCATTCCTCAATTGTCTTATTCTTCTTCCTaGAGTAGTGAGCTTGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: HGLSTKPQIKMMVAIPQLSYSSS*SSELES Trigger: GCTTTCAAGCTCACTACTCCAGGAAGAAGAATAAGA...CAATTGAGGAATGGCTACCATCATTTTGATTTGTGGTTTTGTGCTTAAGCCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTACCTAGTATATTTTAAAGCTATTCCAAAGTTCAGCGCTTCTGCACTGTCATCCAAAGAAAACCAGTaGCATCGAAGAATGCAATCC | + |
|
Preference number: 2 (lower is better) Translates to: FYLVYFKAIPKFSASALSSKENQ*HRRMQS Trigger: GGATTGCATTCTTCGATGCCACTGGTTTTCTTTGGA...TGACAGTGCAGAAGCGCTGAACTTTGGAATAGCTTTAAAATATACTAGGTAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233504.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAATTAGTGTGTGTGCATTTTTAGACTTCACCAGCAGAAGCTGTTTTGGTGCTAAGCTCATATTCACTTaGTGCAATTCTAACAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TISVCAFLDFTSRSCFGAKLIFT*CNSNRE Trigger: TTCTCTGTTAGAATTGCAGCAAGTGAATATGAGCTT...AGCACCAAAACAGCTTCTGCTGGTGAAGTCTAAAAATGCACACACACTAATTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTTAAGCACAAAACCACAAATCAAAATGATGGTAGCCATTCCTCAATTGGGCTGGCCATCATCACCTaGTATAAAGAAATAATAATG | + |
|
Preference number: 2 (lower is better) Translates to: WLKHKTTNQNDGSHSSIGLAIIT*YKEIIM Trigger: CATTATTATTTCTTTATACCAGGTGATGATGGCCAG...CCCAATTGAGGAATGGCTACCATCATTTTGATTTGTGGTTTTGTGCTTAAGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTACTGCATCTTATTCTTCTTCCTaGAGTAGTGAGCTTGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: LFSADSLYTHTSTYVPTASYSSS*SSELES Trigger: GCTTTCAAGCTCACTACTCCAGGAAGAAGAATAAGA...TGCAGTAGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTACTGCTGGCCATCATCACCTaGTATAAAGAAATAATAATG | + |
|
Preference number: 2 (lower is better) Translates to: ASLVQIHCIHIQALMYLLLAIIT*YKEIIM Trigger: CATTATTATTTCTTTATACCAGGTGATGATGGCCAG...CAGTAGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAGGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTACTGGGAAGTAAAAACAAATaGCAACTATATGACAGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: ASLVQIHCIHIQALMYLLGSKNK*QLYDSV Trigger: GACACTGTCATATAGTTGCCATTTGTTTTTACTTCC...CAGTAGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAGGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTACTGCAGATTCGAAAATACCCTaGTTTTCATCAAGGAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: LFSADSLYTHTSTYVPTADSKIP*FSSRKT Trigger: TGTCTTCCTTGATGAAAACCAGGGTATTTTCGAATC...TGCAGTAGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTACTGCAAAAATACTCCAAATATaGTTTGCTGCAAGATGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LFSADSLYTHTSTYVPTAKILQI*FAARCR Trigger: CCTGCATCTTGCAGCAAACCATATTTGGAGTATTTT...TGCAGTAGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR GCA 90 bp | GATCTAAATATGGTGAAGGTCTTGTGTGGGACATTTCCATTAGTGATTTACTCACATGTCCATGTTGTATaGAGTACCCTATCTTATAAA | + |
|
Preference number: 2 (lower is better) Translates to: DLNMVKVLCGTFPLVIYSHVHVV*STLSYK Trigger: TTTATAAGATAGGGTACTGCATACAACATGGACATG...TGAGTAAATCACTAATGGAAATGTCCCACACAAGACCTTCACCATATTTAGATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR GCA 72 bp | ACAAGCACTTATGTACCTACTGCACGCGTGTGCACATaGGCATGCACGCGCGCGTGCGCGCGCGCGCGCGCG | + |
|
Preference number: 3 (lower is better) Translates to: TSTYVPTARVCT*ACTRACARARA Trigger: CGCGCGCGCGCGCGCGCACGCGCGCGTGCATGCGCATGTGCACACGCGTGCAGTAGGTACATAAGTGCTTGT 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR GCA 72 bp | ACACATACAAGCACTTATGTACCTACTGCACGCGTGTaGACATGCGCATGCACGCGCGCGTGCGCGCGCGCG | + |
|
Preference number: 3 (lower is better) Translates to: THTSTYVPTARV*TCACTRACARA Trigger: CGCGCGCGCGCACGCGCGCGTGCATGCGCATGTGCACACGCGTGCAGTAGGTACATAAGTGCTTGTATGTGT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR GCA 72 bp | CCCTCCCCATACCCTGCTTTCCAACCCACCAACTCCTaGTTCCTGGCCCTGGCATTCTTCTGTATTGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PSPYPAFQPTNS*FLALAFFCIGA Trigger: TGCCCCAATACAGAAGAATGCCAGGGCCAGGAAGCAGGAGTTGGTGGGTTGGAAAGCAGGGTATGGGGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CAA 90 bp | TGTCTTCTAAGTTGCTCTGGACCTGTCACTCTGGTCACTCTCACTCGACCCCACCCCACCCATCAGTTGTaGGAGCCTGGCCTCCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: CLLSCSGPVTLVTLTRPHPTHQL*EPGLPF Trigger: AAAGGGGAGGCCAGGCTCCAACAACTGATGGGTGGG...GTGGGGTCGAGTGAGAGTGACCAGAGTGACAGGTCCAGAGCAACTTAGAAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR TCA 72 bp | ATGCCATGGGACAAATGTGTGTCCTTGGTGGCTACTTaGTGGACATGGGGCAGCCGGTCATGGTCGCGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: MPWDKCVSLVAT*WTWGSRSWSRR Trigger: CCTACGCGACCATGACCGGCTGCCCCATGTCCATCAAGTAGCCACCAAGGACACACATTTGTCCCATGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233504.2 |
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| 3UTR-3UTR CAA 90 bp | AGTCCCCTATACCCTCCCCATACCCTGCTTTCCAACCCACCAACTCCTGCTTCCGACCCCTTCAGCTCCTaGGGAACTTTCTCTAGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SPLYPPHTLLSNPPTPASDPFSS*GTFSSC Trigger: GCAACTAGAGAAAGTTCCCAAGGAGCTGAAGGGGTC...GGAAGCAGGAGTTGGTGGGTTGGAAAGCAGGGTATGGGGAGGGTATAGGGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CAA 90 bp | ATGGGATGGATCACTGGATGGGGAGTCTCTGCATGGTCCTTCCTTCCATCTCATCCCACCCATCAGTTGTaGGAGCCTGGCCTCCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: MGWITGWGVSAWSFLPSHPTHQL*EPGLPF Trigger: AAAGGGGAGGCCAGGCTCCAACAACTGATGGGTGGG...ATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR TCA 72 bp | AGTGAGTGTGACCTCGTGACTCCAAGTGACCCCGCCTaGACCTCAGTCCTCTTCTGGGTCATATTCACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SECDLVTPSDPA*TSVLFWVIFTC Trigger: ACAGGTGAATATGACCCAGAAGAGGACTGAGGTTCAGGCGGGGTCACTTGGAGTCACGAGGTCACACTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR TCA 72 bp | AGCTGTTTTGGTGCTGAATCAGTGAGTGTGACCTCGTaGCTCCAAGTGACCCCGCCTGAACCTCAGTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SCFGAESVSVTS*LQVTPPEPQSS Trigger: AGAGGACTGAGGTTCAGGCGGGGTCACTTGGAGTCACGAGGTCACACTCACTGATTCAGCACCAAAACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CAA 90 bp | AGTCCCCTATACCCTCCCCATACCCTGCTTTCCAACCCACCAACTCCTGCTTCCTGTTGGCATATGCAGTaGTGTCTGTGTTTGGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SPLYPPHTLLSNPPTPASCWHMQ*CLCLVV Trigger: AACCACCAAACACAGACACAACTGCATATGCCAACA...GGAAGCAGGAGTTGGTGGGTTGGAAAGCAGGGTATGGGGAGGGTATAGGGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCAGACCCCTTCAGCTCCTTGGGAACTTTCTCTAGTTGCTTCATTCGGGGCCATGCAGGAGACCTGGTaGGGATGTCCAATGAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: FQTPSAPWELSLVASFGAMQETW*GCPMKS Trigger: GCTCTTCATTGGACATCCCAACCAGGTCTCCTGCAT...GGCCCCGAATGAAGCAACTAGAGAAAGTTCCCAAGGAGCTGAAGGGGTCTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGATGGATCACTGGATGGGGAGTCTCTGCATGGTCCTTCCTTCCATCTCATTATCCACTTCTGTATTaGCCAGGCACTGGCATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: MGWITGWGVSAWSFLPSHYPLLY*PGTGIA Trigger: GGCTATGCCAGTGCCTGGCAAATACAGAAGTGGATA...ATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR-3UTR CAA 90 bp | ACTTTCTCTAGTTGCTTCATTCGGGGCCATGTGTTCCATCCAATAGATGACTCTGTCCTTGGTGGCTACTaGATGGACATGGGGCAGCCG | + |
|
Preference number: 3 (lower is better) Translates to: TFSSCFIRGHVFHPIDDSVLGGY*MDMGQP Trigger: CGGCTGCCCCATGTCCATCAAGTAGCCACCAAGGAC...AGAGTCATCTATTGGATGGAACACATGGCCCCGAATGAAGCAACTAGAGAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTTTTTCACACCTGTCTGTGTGTTGAACTCCAGGGTCACTGGATGCCTCTTGCAAGCGGGAGAATGTaGATTACTGGCTTCATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QLFHTCLCVELQGHWMPLASGRM*ITGFMS Trigger: GGACATGAAGCCAGTAATCAACATTCTCCCGCTTGC...AAGAGGCATCCAGTGACCCTGGAGTTCAACACACAGACAGGTGTGAAAAAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTTCTAAGTTGCTCTGGACCTGTCACTCTGGTCACTCTCACTCGACCCCACCATCCTCTGCTACATTaGCAGCTAGAGACACAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: CLLSCSGPVTLVTLTRPHHPLLH*QLETQV Trigger: AACTTGTGTCTCTAGCTGCAAATGTAGCAGAGGATG...GTGGGGTCGAGTGAGAGTGACCAGAGTGACAGGTCCAGAGCAACTTAGAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR CCA 72 bp | TGTCTGTGTTTGGTGGTTGATTATGGGATGGATCACTaGATGGGGAGTCTCTGCATGGTCCTTCCTTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: CLCLVVDYGMDH*MGSLCMVLPSI Trigger: GATGGAAGGAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCATAATCAACCACCAAACACAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR CCA 72 bp | TGCAGTTGTGTCTGTGTTTGGTGGTTGATTATGGGATaGATCACTGGATGGGGAGTCTCTGCATGGTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CSCVCVWWLIMG*ITGWGVSAWSF Trigger: GAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCATAATCAACCACCAAACACAGACACAACTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAGACCCCTTCAGCTCCTTGGGAACTTTCTCTAGTTGCTTCATTCGGGGCCTGTTGGCATATGCAGTaGTGTCTGTGTTTGGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: FQTPSAPWELSLVASFGACWHMQ*CLCLVV Trigger: AACCACCAAACACAGACACAACTGCATATGCCAACA...GGCCCCGAATGAAGCAACTAGAGAAAGTTCCCAAGGAGCTGAAGGGGTCTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGATGGATCACTGGATGGGGAGTCTCTGCATGGTCCTTCCTTCCATCTCATATTCTGTCTTCTAAGTaGCTCTGGACCTGTCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: MGWITGWGVSAWSFLPSHILSSK*LWTCHS Trigger: AGAGTGACAGGTCCAGAGCAACTTAGAAGACAGAAT...ATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| 3UTR TCA 72 bp | TTTGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTTaGTGGCGGACAAGGCCATCCTCTGCTACATTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: FDLHKTKCLSVL*WRTRPSSATFA Trigger: TGCAAATGTAGCAGAGGATGGCCTTGTCCGCCATCAAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR GCA 72 bp | GTTGATTATGGGATGGATCACTGGATGGGGAGTCTCTaGATGGTCCTTCCTTCCATCTCATCTCCAAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VDYGMDHWMGSL*MVLPSISSPSF Trigger: AAAGCTTGGAGATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCATAATCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR GCA 72 bp | TCAGACCCCTTCAGCTCCTTGGGAACTTTCTCTAGTTaGTTCATTCGGGGCCATGTGTTCCATCCAATAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SDPFSSLGTFSS*FIRGHVFHPID Trigger: ATCTATTGGATGGAACACATGGCCCCGAATGAAGCAACTAGAGAAAGTTCCCAAGGAGCTGAAGGGGTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR CCA 72 bp | ATTATGGGATGGATCACTGGATGGGGAGTCTCTGCATaGTCCTTCCTTCCATCTCATCTCCAAGCTTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: IMGWITGWGVSA*SFLPSHLQALS Trigger: AGACAAAGCTTGGAGATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR CCA 72 bp | TGTGTTTGGTGGTTGATTATGGGATGGATCACTGGATaGGGAGTCTCTGCATGGTCCTTCCTTCCATCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: CVWWLIMGWITG*GVSAWSFLPSH Trigger: ATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCATAATCAACCACCAAACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAGACCCCTTCAGCTCCTTGGGAACTTTCTCTAGTTGCTTCATTCGGGGCCCCCTTCTGCAAAATATaGTTGGCATATGCAGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FQTPSAPWELSLVASFGAPFCKI*LAYAVV Trigger: CACAACTGCATATGCCAACAATATTTTGCAGAAGGG...GGCCCCGAATGAAGCAACTAGAGAAAGTTCCCAAGGAGCTGAAGGGGTCTGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGATGGATCACTGGATGGGGAGTCTCTGCATGGTCCTTCCTTCCATCTCATACAATGGGAGTATCCTaGTACTTCACAAATGTGACC | + |
|
Preference number: 3 (lower is better) Translates to: MGWITGWGVSAWSFLPSHTMGVS*YFTNVT Trigger: GGTCACATTTGTGAAGTACAAGGATACTCCCATTGT...ATGAGATGGAAGGAAGGACCATGCAGAGACTCCCCATCCAGTGATCCATCCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTTTTTCACACCTGTCTGTGTGTTGAACTCCAGGGTCACTGGATGCCTCTTACAATGGGAGTATCCTaGTACTTCACAAATGTGACC | + |
|
Preference number: 3 (lower is better) Translates to: QLFHTCLCVELQGHWMPLTMGVS*YFTNVT Trigger: GGTCACATTTGTGAAGTACAAGGATACTCCCATTGT...AAGAGGCATCCAGTGACCCTGGAGTTCAACACACAGACAGGTGTGAAAAAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTTGATGGCGGACAAGGCCATCTGAGACTCTACTTGTaGAAGAATGTGTTCATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LIFTRPSACPFFDGGQGHLRLYL*KNVFMV Trigger: TACCATGAACACATTCTTCAACAAGTAGAGTCTCAG...ATGGCCTTGTCCGCCATCAAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR TCA 72 bp | ATTTTTAGACTTCACCAGCAGAAGCTGTTTTGGTGCTaGATCAGTGAGTGTGACCTCGTGACTCCAAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: IFRLHQQKLFWC*ISECDLVTPSD Trigger: GTCACTTGGAGTCACGAGGTCACACTCACTGATTCAGCACCAAAACAGCTTCTGCTGGTGAAGTCTAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR CCA 72 bp | TGCCCCTGTCATCATCATCCCTCTTATTCTTCTTCCTaGAGTAGTGAGCTTGAAAGCCATGACCACAGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: CPCHHHPSYSSS*SSELESHDHSY Trigger: ATAACTGTGGTCATGGCTTTCAAGCTCACTACTCCAGGAAGAAGAATAAGAGGGATGATGATGACAGGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGAATGACCAACTTAGGTGCCCCTGTCATCATCATCCCTCTTATTCTTCTTCCATATCTACTGGGTATTaGGCAGTGTTCATTGTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: GNDQLRCPCHHHPSYSSSISTGY*AVFIVC Trigger: GCAAACAATGAACACTGCCAAATACCCAGTAGATAT...GGAAGAAGAATAAGAGGGATGATGATGACAGGGGCACCTAAGTTGGTCATTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR TCA 72 bp | GATGCAAGAACTCCAAGAAAGCAAGCGGGAGAATGTTaGTTACTGGCTTCATGTCCATGTTGTATGCAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: DARTPRKQAGEC*LLASCPCCMQY Trigger: GTACTGCATACAACATGGACATGAAGCCAGTAATCAACATTCTCCCGCTTGCTTTCTTGGAGTTCTTGCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR TCA 72 bp | TGCCTTTGGCTCTCTTCTCTTAAATCTGAGAGAAACTaGATACCCTGGTCATCATCTGAGATGACCAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CLWLSSLKSERN*IPWSSSEMTSP Trigger: AGGACTGGTCATCTCAGATGATGACCAGGGTATTCAGTTTCTCTCAGATTTAAGAGAAGAGAGCCAAAGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR GCA 72 bp | GAGACACAAGTTCTGAGGTTACTGGTTAGTTCATATTaGTGTTCCTCTTATAGGGTTTCAGACCCCTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: ETQVLRLLVSSY*CSSYRVSDPFS Trigger: GCTGAAGGGGTCTGAAACCCTATAAGAGGAACAGCAATATGAACTAACCAGTAACCTCAGAACTTGTGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR GCA 72 bp | ACACCTGTCTGTGTGTTGAACTCCAGGGTCACTGGATaGCTCTTTAGTGCAGATTCATTGTATACACATACA | + |
|
Preference number: 3 (lower is better) Translates to: TPVCVLNSRVTG*LFSADSLYTHT Trigger: TGTATGTGTATACAATGAATCTGCACTAAAGAGGCATCCAGTGACCCTGGAGTTCAACACACAGACAGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR GCA 72 bp | ACAGACACAGTGAAAAATACTCCAAATATGGTTTGCTaGAAGATGCAGGAGACCTGGTTGGGATGTCCAATG | + |
|
Preference number: 3 (lower is better) Translates to: TDTVKNTPNMVC*KMQETWLGCPM Trigger: CATTGGACATCCCAACCAGGTCTCCTGCATCTTGCAGCAAACCATATTTGGAGTATTTTTCACTGTGTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR CCA 72 bp | AATATTGTTGGCATATGCAGTTGTGTCTGTGTTTGGTaGTTGATTATGGGATGGATCACTGGATGGGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: NIVGICSCVCVW*LIMGWITGWGV Trigger: GACTCCCCATCCAGTGATCCATCCCATAATCAACCACCAAACACAGACACAACTGCATATGCCAACAATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR CCA 72 bp | GGAGATGTGACCAACCAGATTCCACAGAGAACAAGTTaGATTAGGGTACAAATGGGAATGACCAACTTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: GDVTNQIPQRTS*IRVQMGMTNLG Trigger: ACCTAAGTTGGTCATTCCCATTTGTACCCTAATCCAACTTGTTCTCTGTGGAATCTGGTTGGTCACATCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTACTGGCAAGCGGGAGAATGTaGATTACTGGCTTCATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ASLVQIHCIHIQALMYLLASGRM*ITGFMS Trigger: GGACATGAAGCCAGTAATCAACATTCTCCCGCTTGC...CAGTAGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTCTCTAGTTGCTTCATTCGGGGCCATGTGTTCCATCCAATAGATGACTCTCCCTTCTGCAAAATATaGTTGGCATATGCAGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TFSSCFIRGHVFHPIDDSPFCKI*LAYAVV Trigger: CACAACTGCATATGCCAACAATATTTTGCAGAAGGG...AGAGTCATCTATTGGATGGAACACATGGCCCCGAATGAAGCAACTAGAGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGGCTTAAGCACAAAACCACAAATCAAAATGATGGTAGCCATTCCTCAATTGTATCCACTTCTGTATTaGCCAGGCACTGGCATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: HGLSTKPQIKMMVAIPQLYPLLY*PGTGIA Trigger: GGCTATGCCAGTGCCTGGCAAATACAGAAGTGGATA...CAATTGAGGAATGGCTACCATCATTTTGATTTGTGGTTTTGTGCTTAAGCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTACCTAGTATATTTTAAAGCTATTCCAAAGTTCAGCGCTTCTGCACTGTCAGACCCCTTCAGCTCCTaGGGAACTTTCTCTAGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: FYLVYFKAIPKFSASALSDPFSS*GTFSSC Trigger: GCAACTAGAGAAAGTTCCCAAGGAGCTGAAGGGGTC...TGACAGTGCAGAAGCGCTGAACTTTGGAATAGCTTTAAAATATACTAGGTAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGAATGACCAACTTAGGTGCCCCTGTCATCATCATCCCTCTTATTCTTCTTCCGAAGTTGTTGACTCTTaGGAAAACAAGGTATATAGC | + |
|
Preference number: 3 (lower is better) Translates to: GNDQLRCPCHHHPSYSSSEVVDS*ENKVYS Trigger: GCTATATACCTTGTTTTCCAAAGAGTCAACAACTTC...GGAAGAAGAATAAGAGGGATGATGATGACAGGGGCACCTAAGTTGGTCATTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR TCA 72 bp | TCTGAGATGACCAGTCCTATCCAAGTCCATCTAAAATaGAACATCAAGGAGACCATGCCATGGGACAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: SEMTSPIQVHLK*NIKETMPWDKC Trigger: ACATTTGTCCCATGGCATGGTCTCCTTGATGTTTCATTTTAGATGGACTTGGATAGGACTGGTCATCTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR TCA 72 bp | TCTGCTGTTTCATTGGAAACCTCATTTTCTGGGCATTaGACACAATCAAAGCAGCAGTCTGCTGTTTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SAVSLETSFSGH*TQSKQQSAVSS Trigger: GGAAGAAACAGCAGACTGCTGCTTTGATTGTGTTCAATGCCCAGAAAATGAGGTTTCCAATGAAACAGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR GCA 72 bp | CTTATCATCTGGACACCTCACACACTGTTCCATATCTaGTGTTTCATTGGAAACCTCATTTTCTGGGCATTG | + |
|
Preference number: 3 (lower is better) Translates to: LIIWTPHTLFHI*CFIGNLIFWAL Trigger: CAATGCCCAGAAAATGAGGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTGAGGTGTCCAGATGATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR CCA 72 bp | CAAAATATTGTTGGCATATGCAGTTGTGTCTGTGTTTaGTGGTTGATTATGGGATGGATCACTGGATGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: QNIVGICSCVCV*WLIMGWITGWG Trigger: TCCCCATCCAGTGATCCATCCCATAATCAACCACCAAACACAGACACAACTGCATATGCCAACAATATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR GCA 72 bp | ATATCAGGGTCCCTTCTGCAAAATATTGTTGGCATATaGAGTTGTGTCTGTGTTTGGTGGTTGATTATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ISGSLLQNIVGI*SCVCVWWLIMG Trigger: TCCCATAATCAACCACCAAACACAGACACAACTGCATATGCCAACAATATTTTGCAGAAGGGACCCTGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR GCA 72 bp | ACCTTCATCACTCATGGCCATATCATAGTTGTGCAGTaGTGTCCATTCCAATGTGTTGTTGAATGTCATATG | + |
|
Preference number: 3 (lower is better) Translates to: TFITHGHIIVVQ*CPFQCVVECHM Trigger: CATATGACATTCAACAACACATTGGAATGGACAGCACTGCACAACTATGATATGGCCATGAGTGATGAAGGT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR CCA 72 bp | GTCAGATATATCAGGGTCCCTTCTGCAAAATATTGTTaGCATATGCAGTTGTGTCTGTGTTTGGTGGTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: VRYIRVPSAKYC*HMQLCLCLVVD Trigger: ATCAACCACCAAACACAGACACAACTGCATATGCCAACAATATTTTGCAGAAGGGACCCTGATATATCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR CCA 72 bp | TTCCATATCTGCTGTTTCATTGGAAACCTCATTTTCTaGGCATTGAACACAATCAAAGCAGCAGTCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FHICCFIGNLIF*ALNTIKAAVCC Trigger: ACAGCAGACTGCTGCTTTGATTGTGTTCAATGCCCAGAAAATGAGGTTTCCAATGAAACAGCAGATATGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR CCA 72 bp | GACACCTCACACACTGTTCCATATCTGCTGTTTCATTaGAAACCTCATTTTCTGGGCATTGAACACAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: DTSHTVPYLLFH*KPHFLGIEHNQ Trigger: TTGATTGTGTTCAATGCCCAGAAAATGAGGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTGAGGTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATAAGAGTCAGATATATCAGGTTCTGCAAAATATTGTaGGCATATGCAGTTGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TSVFARHWHSLIRVRYIRFCKIL*AYAVVS Trigger: AGACACAACTGCATATGCCAACAATATTTTGCAGAA...CCTGATATATCTGACTCTTATGAGGCTATGCCAGTGCCTGGCAAATACAGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | GGATGCCTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTCATCCTCTGCTACATTaGCAGCTAGAGACACAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GCLFSADSLYTHTSTYVPHPLLH*QLETQV Trigger: AACTTGTGTCTCTAGCTGCAAATGTAGCAGAGGATG...AGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAGGCATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTACTGGTAGCCATTCCTCAATaGGGATTCCCAGTTCTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: ASLVQIHCIHIQALMYLLVAIPQ*GFPVLN Trigger: ATTTAGAACTGGGAATCCCAATTGAGGAATGGCTAC...CAGTAGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | GGATGCCTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTGTAGCCATTCCTCAATaGGGATTCCCAGTTCTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: GCLFSADSLYTHTSTYVPVAIPQ*GFPVLN Trigger: ATTTAGAACTGGGAATCCCAATTGAGGAATGGCTAC...AGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAGGCATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTTAAGCACAAAACCACAAATCAAAATGATGGTAGCCATTCCTCAATTGGGAATATGGTGAAGGTCTaGTGTGGGACATTTCCATTA | + |
|
Preference number: 3 (lower is better) Translates to: WLKHKTTNQNDGSHSSIGNMVKV*CGTFPL Trigger: TAATGGAAATGTCCCACACAAGACCTTCACCATATT...CCCAATTGAGGAATGGCTACCATCATTTTGATTTGTGGTTTTGTGCTTAAGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTGAGGTTACTGGTTAGTTCATATTGCTGTTCCTCTTATAGGGTTTCAGACATGACAGAGCCTTTATaGCAAAGAATGACAGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VLRLLVSSYCCSSYRVSDMTEPL*QRMTVF Trigger: GAAGACTGTCATTCTTTGCAATAAAGGCTCTGTCAT...GTCTGAAACCCTATAAGAGGAACAGCAATATGAACTAACCAGTAACCTCAGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR TCA 72 bp | TTTCATGGGTATTGTGTTCCCCATTCTAAGGAGGGATaGAGTATTGACACTTTGGTATTCCTTCTTCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: FHGYCVPHSKEG*SIDTLVFLLLE Trigger: CTCAAGAAGAAGGAATACCAAAGTGTCAATACTTCATCCCTCCTTAGAATGGGGAACACAATACCCATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR TCA 72 bp | GCCTTTATTGCAAAGAATGACAGTCTTCCCATGCTCTaGTTGTATATCTCTGTCAATAAAGGGAGGAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: AFIAKNDSLPML*LYISVNKGRRC Trigger: ACATCTCCTCCCTTTATTGACAGAGATATACAATCAGAGCATGGGAAGACTGTCATTCTTTGCAATAAAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR GCA 72 bp | ACAGAGCCTTTATTGCAAAGAATGACAGTCTTCCCATaGTCTGATTGTATATCTCTGTCAATAAAGGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TEPLLQRMTVFP*SDCISLSIKGG Trigger: TCCTCCCTTTATTGACAGAGATATACAATCAGAGCATGGGAAGACTGTCATTCTTTGCAATAAAGGCTCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTACCTAGTATATTTTAAAGCTATTCCAAAGTTCAGCGCTTCTGCACTGTCATCTGTATTGGGGCATTaGATCTTCACAAGACCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: FYLVYFKAIPKFSASALSSVLGH*IFTRPS Trigger: ACTTGGTCTTGTGAAGATCAAATGCCCCAATACAGA...TGACAGTGCAGAAGCGCTGAACTTTGGAATAGCTTTAAAATATACTAGGTAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGGCTTAAGCACAAAACCACAAATCAAAATGATGGTAGCCATTCCTCAATTGATATCTACTGGGTATTaGGCAGTGTTCATTGTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: HGLSTKPQIKMMVAIPQLISTGY*AVFIVC Trigger: GCAAACAATGAACACTGCCAAATACCCAGTAGATAT...CAATTGAGGAATGGCTACCATCATTTTGATTTGTGGTTTTGTGCTTAAGCCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTACTGCTGAGACTCTACTTGTaGAAGAATGTGTTCATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: ASLVQIHCIHIQALMYLLLRLYL*KNVFMV Trigger: TACCATGAACACATTCTTCAACAAGTAGAGTCTCAG...CAGTAGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGATTGTATATCTCTGTCAATAAAGGGAGGAGATGTGACCAACCAGATTCCATTTCTGAGACTCTACTaGTTGAAGAATGTGTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: SDCISLSIKGGDVTNQIPFLRLY*LKNVFM Trigger: CATGAACACATTCTTCAACAAGTAGAGTCTCAGAAA...TGGAATCTGGTTGGTCACATCTCCTCCCTTTATTGACAGAGATATACAATCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR CCA 72 bp | TTCCCCATTCTAAGGAGGGATGAAGTATTGACACTTTaGTATTCCTTCTTCTTGAGAAACTTAGAATACCCA | + |
|
Preference number: 3 (lower is better) Translates to: FPILRRDEVLTL*YSFFLRNLEYP Trigger: TGGGTATTCTAAGTTTCTCAAGAAGAAGGAATACCAAAGTGTCAATACTTCATCCCTCCTTAGAATGGGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR CCA 72 bp | AAACAGCATTATACAAATTGTAACCTTCATCACTCATaGCCATATCATAGTTGTGCAGTGCTGTCCATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: KQHYTNCNLHHS*PYHSCAVLSIP Trigger: TGGAATGGACAGCACTGCACAACTATGATATGGCCATGAGTGATGAAGGTTACAATTTGTATAATGCTGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTACTGTTCTGCAAAATATTGTaGGCATATGCAGTTGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ASLVQIHCIHIQALMYLLFCKIL*AYAVVS Trigger: AGACACAACTGCATATGCCAACAATATTTTGCAGAA...CAGTAGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR TCA 72 bp | GTATTTGATCTTATCTCTTACAGAAGCAAAGCTCTCTaGTGGTGGCTGATCAAGATGCTGATTTTATGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: VFDLISYRSKAL*WWLIKMLILCL Trigger: TAGACATAAAATCAGCATCTTGATCAGCCACCATCAGAGAGCTTTGCTTCTGTAAGAGATAAGATCAAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR GCA 72 bp | TCTGGGATCATATTAACAAAAGCTAAACAGATCTCATaGCTTTGGCTCTCTTCTCTTAAATCTGAGAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SGIILTKAKQIS*LWLSSLKSERN Trigger: GTTTCTCTCAGATTTAAGAGAAGAGAGCCAAAGGCATGAGATCTGTTTAGCTTTTGTTAATATGATCCCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR TCA 72 bp | TTTCAAATCAGTGCCTTTTATCACATTAGGACTCTATaGTCTCCCAAATCCCAACATAGGCAATTTACCATT | + |
|
Preference number: 3 (lower is better) Translates to: FQISAFYHIRTL*SPKSQHRQFTI Trigger: AATGGTAAATTGCCTATGTTGGGATTTGGGAGATCATAGAGTCCTAATGTGATAAAAGGCACTGATTTGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR TCA 72 bp | AGTGCTGTCCATTCCAATGTGTTGTTGAATGTCATATaGTCCATTTTACTGCTGTTCTTAGAGATTGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: SAVHSNVLLNVI*SILLLFLEIEQ Trigger: TTGTTCAATCTCTAAGAACAGCAGTAAAATGGATCATATGACATTCAACAACACATTGGAATGGACAGCACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTTCTAAGTTGCTCTGGACCTGTCACTCTGGTCACTCTCACTCGACCCCACCCTCTACAACCACCATaGCCCTCCCCCTGGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLLSCSGPVTLVTLTRPHPLQPP*PSPWCC Trigger: ACAGCACCAGGGGGAGGGTCATGGTGGTTGTAGAGG...GTGGGGTCGAGTGAGAGTGACCAGAGTGACAGGTCCAGAGCAACTTAGAAGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| CDS-3UTR TCA 90 bp | AGTCCCCTATACCCTCCCCATACCCTGCTTTCCAACCCACCAACTCCTGCTTCCGACAGTTTCCACCAATaGTGGAGAACATCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPLYPPHTLLSNPPTPASDSFHQ*WRTSKS Trigger: TGACTTTGATGTTCTCCATCATTGGTGGAAACTGTC...GGAAGCAGGAGTTGGTGGGTTGGAAAGCAGGGTATGGGGAGGGTATAGGGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| 3UTR CAA 72 bp | GCTTCCTGGCCCTGGCATTCTTCTGTATTGGGGCATTaGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASWPWHSSVLGH*IFTRPSACPFF Trigger: AAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAAATGCCCCAATACAGAAGAATGCCAGGGCCAGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR CAA 72 bp | CCAAATATGGTTTGCTGCAAGATGCAGGAGACCTGGTaGGGATGTCCAATGAAGAGCAGGGAGCAGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PNMVCCKMQETW*GCPMKSREQRK Trigger: CTTTCTCTGCTCCCTGCTCTTCATTGGACATCCCAACCAGGTCTCCTGCATCTTGCAGCAAACCATATTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTTCTAAGTTGCTCTGGACCTGTCACTCTGGTCACTCTCACTCGACCCCACGCTAAACAGATCTCATaGCTTTGGCTCTCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLLSCSGPVTLVTLTRPHAKQIS*LWLSSL Trigger: AAGAGAAGAGAGCCAAAGGCATGAGATCTGTTTAGC...GTGGGGTCGAGTGAGAGTGACCAGAGTGACAGGTCCAGAGCAACTTAGAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| 3UTR CAA 72 bp | TGTTCCTCTTATAGGGTTTCAGACCCCTTCAGCTCCTaGGGAACTTTCTCTAGTTGCTTCATTCGGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CSSYRVSDPFSS*GTFSSCFIRGH Trigger: ATGGCCCCGAATGAAGCAACTAGAGAAAGTTCCCAAGGAGCTGAAGGGGTCTGAAACCCTATAAGAGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| CDS-3UTR TCA 90 bp | TTGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTTGATGGCGGACAAGGCCATCAACGTGGAAGGCAATaGCAGAGCCTTTATTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LIFTRPSACPFFDGGQGHQRGRQ*QSLYCK Trigger: TTTGCAATAAAGGCTCTGTCATTGCCTTCCACGTTG...ATGGCCTTGTCCGCCATCAAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| CDS-3UTR GCA 90 bp | CAGCTTTTTCACACCTGTCTGTGTGTTGAACTCCAGGGTCACTGGATGCCTCTTACATCAAGGAGACCATaGCATGGGACAAATGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLFHTCLCVELQGHWMPLTSRRP*HGTNVC Trigger: ACACACATTTGTCCCATGGCATGGTCTCCTTGATGT...AAGAGGCATCCAGTGACCCTGGAGTTCAACACACAGACAGGTGTGAAAAAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| CDS-3UTR GCA 90 bp | AGTCCCCTATACCCTCCCCATACCCTGCTTTCCAACCCACCAACTCCTGCTTCCCTTGTCATGTATATCTaGATGTTTTCTGGGATCATA | + |
|
Preference number: 4 (lower is better) Translates to: SPLYPPHTLLSNPPTPASLVMYI*MFSGII Trigger: TATGATCCCAGAAAACATGCAGATATACATGACAAG...GGAAGCAGGAGTTGGTGGGTTGGAAAGCAGGGTATGGGGAGGGTATAGGGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| CDS-3UTR TCA 90 bp | TTGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTTGATGGCGGACAAGGCCATTCATTTTCTGGGCATTaGACACAATCAAAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LIFTRPSACPFFDGGQGHSFSGH*TQSKQQ Trigger: CTGCTGCTTTGATTGTGTTCAATGCCCAGAAAATGA...ATGGCCTTGTCCGCCATCAAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| CDS-3UTR GCA 90 bp | ACTTTCTCTAGTTGCTTCATTCGGGGCCATGTGTTCCATCCAATAGATGACTCTTGGTTTGCTGCAAGATaGAGGAGACCTGGTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TFSSCFIRGHVFHPIDDSWFAAR*RRPGWD Trigger: ATCCCAACCAGGTCTCCTGCATCTTGCAGCAAACCA...AGAGTCATCTATTGGATGGAACACATGGCCCCGAATGAAGCAACTAGAGAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| 3UTR CAA 72 bp | TTCTTTGATGGCGGACAAGGCCATCCTCTGCTACATTaGCAGCTAGAGACACAAGTTCTGAGGTTACTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FFDGGQGHPLLH*QLETQVLRLLV Trigger: AACCAGTAACCTCAGAACTTGTGTCTCTAGCTGCAAATGTAGCAGAGGATGGCCTTGTCCGCCATCAAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR CAA 72 bp | CCCAGGACAACGTGGAAGGCAATGACAGAGCCTTTATaGCAAAGAATGACAGTCTTCCCATGCTCTGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRTTWKAMTEPL*QRMTVFPCSDC Trigger: ACAATCAGAGCATGGGAAGACTGTCATTCTTTGCAATAAAGGCTCTGTCATTGCCTTCCACGTTGTCCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| CDS-3UTR TCA 90 bp | TTGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTTGATGGCGGACAAGGCCATTCAGACAGCACAAGATaGGAGAAAACTTCAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LIFTRPSACPFFDGGQGHSDSTR*EKTSET Trigger: TGTTTCTGAAGTTTTCTCTCATCTTGTGCTGTCTGA...ATGGCCTTGTCCGCCATCAAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| CDS-3UTR TCA 90 bp | GTTCTGAGGTTACTGGTTAGTTCATATTGCTGTTCCTCTTATAGGGTTTCAGACCCCACTGTGAGGTTGTaGTCCAGATTCTCCAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLRLLVSSYCCSSYRVSDPTVRL*SRFSKH Trigger: GTGCTTGGAGAATCTGGATCACAACCTCACAGTGGG...GTCTGAAACCCTATAAGAGGAACAGCAATATGAACTAACCAGTAACCTCAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| CDS-3UTR GCA 90 bp | TTGTGTCTGTGTTTGGTGGTTGATTATGGGATGGATCACTGGATGGGGAGTCTCCTCAACTTTGTGGTGTaGAAAAGTGATAGTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LCLCLVVDYGMDHWMGSLLNFVV*KSDSAM Trigger: CATGGCACTATCACTTTTGCACACCACAAAGTTGAG...GAGACTCCCCATCCAGTGATCCATCCCATAATCAACCACCAAACACAGACACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| CDS-3UTR TCA 90 bp | TTGTGTCTGTGTTTGGTGGTTGATTATGGGATGGATCACTGGATGGGGAGTCTCTCAGACAGCACAAGATaGGAGAAAACTTCAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LCLCLVVDYGMDHWMGSLSDSTR*EKTSET Trigger: TGTTTCTGAAGTTTTCTCTCATCTTGTGCTGTCTGA...GAGACTCCCCATCCAGTGATCCATCCCATAATCAACCACCAAACACAGACACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| CDS-3UTR CCA 90 bp | ACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATAAGAGTCAGATATATCAGGCCTCCAAAAGCAACTTaGTTCACTCAGACAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: TSVFARHWHSLIRVRYIRPPKAT*FTQTAQ Trigger: TTGTGCTGTCTGAGTGAACCAAGTTGCTTTTGGAGG...CCTGATATATCTGACTCTTATGAGGCTATGCCAGTGCCTGGCAAATACAGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| CDS-3UTR CCA 90 bp | ACTTTCTCTAGTTGCTTCATTCGGGGCCATGTGTTCCATCCAATAGATGACTCTCCTCCAAAAGCAACTTaGTTCACTCAGACAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: TFSSCFIRGHVFHPIDDSPPKAT*FTQTAQ Trigger: TTGTGCTGTCTGAGTGAACCAAGTTGCTTTTGGAGG...AGAGTCATCTATTGGATGGAACACATGGCCCCGAATGAAGCAACTAGAGAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCGCAGCATAAACAGCATTATACAAATTGTAACCTTCATCACTCATGGCCACCTCCAAAAGCAACTTaGTTCACTCAGACAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GPQHKQHYTNCNLHHSWPPPKAT*FTQTAQ Trigger: TTGTGCTGTCTGAGTGAACCAAGTTGCTTTTGGAGG...TGGCCATGAGTGATGAAGGTTACAATTTGTATAATGCTGTTTATGCTGCGGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR CAA 72 bp | AGAAACAGACACAGTGAAAAATACTCCAAATATGGTTaGCTGCAAGATGCAGGAGACCTGGTTGGGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RNRHSEKYSKYG*LQDAGDLVGMS Trigger: GGACATCCCAACCAGGTCTCCTGCATCTTGCAGCAAACCATATTTGGAGTATTTTTCACTGTGTCTGTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| CDS-3UTR TCA 90 bp | ACAATTAGTGTGTGTGCATTTTTAGACTTCACCAGCAGAAGCTGTTTTGGTGCTGATGACATCCCACTGTaGGGTTGTGATCCAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TISVCAFLDFTSRSCFGADDIPL*GCDPDS Trigger: AGAATCTGGATCACAACCTCACAGTGGGATGTCATC...AGCACCAAAACAGCTTCTGCTGGTGAAGTCTAAAAATGCACACACACTAATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| CDS-3UTR TCA 90 bp | GATCTAAATATGGTGAAGGTCTTGTGTGGGACATTTCCATTAGTGATTTACTCAGGTTGGGATGTCCAATaGAGAGCAGGGAGCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DLNMVKVLCGTFPLVIYSGWDVQ*RAGSRE Trigger: TTCTCTGCTCCCTGCTCTTCATTGGACATCCCAACC...TGAGTAAATCACTAATGGAAATGTCCCACACAAGACCTTCACCATATTTAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| CDS-3UTR CCA 90 bp | ACTTTCTCTAGTTGCTTCATTCGGGGCCATGTGTTCCATCCAATAGATGACTCTTCCAAAGAAAACCAGTaGCATCGAAGAATGCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: TFSSCFIRGHVFHPIDDSSKENQ*HRRMQS Trigger: GGATTGCATTCTTCGATGCCACTGGTTTTCTTTGGA...AGAGTCATCTATTGGATGGAACACATGGCCCCGAATGAAGCAACTAGAGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| 3UTR CAA 72 bp | AGGGTCCCTTCTGCAAAATATTGTTGGCATATGCAGTaGTGTCTGTGTTTGGTGGTTGATTATGGGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RVPSAKYCWHMQ*CLCLVVDYGMD Trigger: ATCCATCCCATAATCAACCACCAAACACAGACACAACTGCATATGCCAACAATATTTTGCAGAAGGGACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| 3UTR CAA 72 bp | ATCATCCCTCTTATTCTTCTTCCTGGAGTAGTGAGCTaGAAAGCCATGACCACAGTTATTGTTTTGGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IIPLILLPGVVS*KAMTTVIVLAN Trigger: GTTGGCCAAAACAATAACTGTGGTCATGGCTTTCAAGCTCACTACTCCAGGAAGAAGAATAAGAGGGATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTATTGGGGCATTTGATCTTCACAAGACCAAGTGCCTGTCCGTTCTTTGATTCAGACAGCACAAGATaGGAGAAAACTTCAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SVLGHLIFTRPSACPFFDSDSTR*EKTSET Trigger: TGTTTCTGAAGTTTTCTCTCATCTTGTGCTGTCTGA...ATCAAAGAACGGACAGGCACTTGGTCTTGTGAAGATCAAATGCCCCAATACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTGAGGTTACTGGTTAGTTCATATTGCTGTTCCTCTTATAGGGTTTCAGACACTCCAAATATGGTTTaGTGCAAGATGCAGGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: VLRLLVSSYCCSSYRVSDTPNMV*CKMQET Trigger: GGTCTCCTGCATCTTGCAGCAAACCATATTTGGAGT...GTCTGAAACCCTATAAGAGGAACAGCAATATGAACTAACCAGTAACCTCAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| CDS-3UTR CCA 90 bp | GCCTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTACTGAATGTGTGTCCTTGGTaGCTACTTGATGGACATGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLVQIHCIHIQALMYLLNVCPW*LLDGHG Trigger: CCCATGTCCATCAAGTAGCCACCAAGGACACACATT...CAGTAGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| CDS-3UTR CCA 90 bp | ACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATAAGAGTCAGATATATCAGGCAGATCTCATGCCTTTaGCTCTCTTCTCTTAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: TSVFARHWHSLIRVRYIRQISCL*LSSLKS Trigger: AGATTTAAGAGAAGAGAGCCAAAGGCATGAGATCTG...CCTGATATATCTGACTCTTATGAGGCTATGCCAGTGCCTGGCAAATACAGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| 3UTR CAA 72 bp | ATCTGCTGTTTCATTGGAAACCTCATTTTCTGGGCATaGAACACAATCAAAGCAGCAGTCTGCTGTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ICCFIGNLIFWA*NTIKAAVCCFF Trigger: GAAGAAACAGCAGACTGCTGCTTTGATTGTGTTCAATGCCCAGAAAATGAGGTTTCCAATGAAACAGCAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| CDS-3UTR TCA 90 bp | ACTTTCTCTAGTTGCTTCATTCGGGGCCATGTGTTCCATCCAATAGATGACTCTTCATACTCTGTACACTaGTTTTCTCTATGCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: TFSSCFIRGHVFHPIDDSSYSVH*FSLCFM Trigger: CATGAAGCATAGAGAAAATCAGTGTACAGAGTATGA...AGAGTCATCTATTGGATGGAACACATGGCCCCGAATGAAGCAACTAGAGAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| CDS-3UTR GCA 90 bp | TTCTACCTAGTATATTTTAAAGCTATTCCAAAGTTCAGCGCTTCTGCACTGTCACCAAATATGGTTTGCTaGAAGATGCAGGAGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FYLVYFKAIPKFSASALSPNMVC*KMQETW Trigger: CCAGGTCTCCTGCATCTTGCAGCAAACCATATTTGG...TGACAGTGCAGAAGCGCTGAACTTTGGAATAGCTTTAAAATATACTAGGTAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| CDS-3UTR CCA 90 bp | ACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATAAGAGTCAGATATATCAGGGGAAACCTCATTTTCTaGGCATTGAACACAATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TSVFARHWHSLIRVRYIRGNLIF*ALNTIK Trigger: TTTGATTGTGTTCAATGCCCAGAAAATGAGGTTTCC...CCTGATATATCTGACTCTTATGAGGCTATGCCAGTGCCTGGCAAATACAGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| CDS-3UTR GCA 90 bp | GTTCTGAGGTTACTGGTTAGTTCATATTGCTGTTCCTCTTATAGGGTTTCAGACATCATAGTTGTGCAGTaGTGTCCATTCCAATGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLRLLVSSYCCSSYRVSDIIVVQ*CPFQCV Trigger: AACACATTGGAATGGACAGCACTGCACAACTATGAT...GTCTGAAACCCTATAAGAGGAACAGCAATATGAACTAACCAGTAACCTCAGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| CDS-3UTR CCA 90 bp | GTTCTGAGGTTACTGGTTAGTTCATATTGCTGTTCCTCTTATAGGGTTTCAGACTCTTATTCTTCTTCCTaGAGTAGTGAGCTTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLRLLVSSYCCSSYRVSDSYSSS*SSELES Trigger: GCTTTCAAGCTCACTACTCCAGGAAGAAGAATAAGA...GTCTGAAACCCTATAAGAGGAACAGCAATATGAACTAACCAGTAACCTCAGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| 3UTR CAA 72 bp | TCCCATGGCCCATTCCAAGTCATCACATATATGAAGTaGTTGACTCTTTGGAAAACAAGGTATATAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHGPFQVITYMK*LTLWKTRYIAS Trigger: GGAAGCTATATACCTTGTTTTCCAAAGAGTCAACAACTTCATATATGTGATGACTTGGAATGGGCCATGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| CDS-3UTR CCA 90 bp | CATGGCTTAAGCACAAAACCACAAATCAAAATGATGGTAGCCATTCCTCAATTGAAAATACTCCAAATATaGTTTGCTGCAAGATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HGLSTKPQIKMMVAIPQLKILQI*FAARCR Trigger: CCTGCATCTTGCAGCAAACCATATTTGGAGTATTTT...CAATTGAGGAATGGCTACCATCATTTTGATTTGTGGTTTTGTGCTTAAGCCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| 3UTR CAA 72 bp | CATGGCCCATTCCAAGTCATCACATATATGAAGTTGTaGACTCTTTGGAAAACAAGGTATATAGCTTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: HGPFQVITYMKL*TLWKTRYIASY Trigger: ATAGGAAGCTATATACCTTGTTTTCCAAAGAGTCAACAACTTCATATATGTGATGACTTGGAATGGGCCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| CDS-3UTR CCA 90 bp | GCCTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTACTGAAAGTGATAGTGCCATaGAAGAGATTAAAGGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ASLVQIHCIHIQALMYLLKVIVP*KRLKVN Trigger: ATTCACCTTTAATCTCTTCCATGGCACTATCACTTT...CAGTAGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAGGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| 3UTR CAA 72 bp | AAACCACAAATCAAAATGATGGTAGCCATTCCTCAATaGGGATTCCCAGTTCTAAATATATTCATGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KPQIKMMVAIPQ*GFPVLNIFMFA Trigger: AGCAAACATGAATATATTTAGAACTGGGAATCCCAATTGAGGAATGGCTACCATCATTTTGATTTGTGGTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| CDS-3UTR CAA 90 bp | AGTCCCCTATACCCTCCCCATACCCTGCTTTCCAACCCACCAACTCCTGCTTCCATGCAGGAGACCTGGTaGGGATGTCCAATGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPLYPPHTLLSNPPTPASMQETW*GCPMKS Trigger: GCTCTTCATTGGACATCCCAACCAGGTCTCCTGCAT...GGAAGCAGGAGTTGGTGGGTTGGAAAGCAGGGTATGGGGAGGGTATAGGGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| CDS-3UTR CAA 90 bp | ACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATAAGAGTCAGATATATCAGGGTCCTTGGTGGCTACTaGATGGACATGGGGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TSVFARHWHSLIRVRYIRVLGGY*MDMGQP Trigger: CGGCTGCCCCATGTCCATCAAGTAGCCACCAAGGAC...CCTGATATATCTGACTCTTATGAGGCTATGCCAGTGCCTGGCAAATACAGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
||
| CDS-3UTR CAA 90 bp | CAGCTTTTTCACACCTGTCTGTGTGTTGAACTCCAGGGTCACTGGATGCCTCTTTCCTCCAAAAGCAACTaGGTTCACTCAGACAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: QLFHTCLCVELQGHWMPLSSKSN*VHSDST Trigger: TGTGCTGTCTGAGTGAACCAAGTTGCTTTTGGAGGA...AAGAGGCATCCAGTGACCCTGGAGTTCAACACACAGACAGGTGTGAAAAAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
||
| CDS-3UTR CAA 90 bp | GGGAATGACCAACTTAGGTGCCCCTGTCATCATCATCCCTCTTATTCTTCTTCCTCCTCCAAAAGCAACTaGGTTCACTCAGACAGCACA | + |
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Preference number: 5 (lower is better) Translates to: GNDQLRCPCHHHPSYSSSSSKSN*VHSDST Trigger: TGTGCTGTCTGAGTGAACCAAGTTGCTTTTGGAGGA...GGAAGAAGAATAAGAGGGATGATGATGACAGGGGCACCTAAGTTGGTCATTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| CDS-3UTR CAA 90 bp | TGTCTTCTAAGTTGCTCTGGACCTGTCACTCTGGTCACTCTCACTCGACCCCACTTTCTGAGACTCTACTaGTTGAAGAATGTGTTCATG | + |
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Preference number: 5 (lower is better) Translates to: CLLSCSGPVTLVTLTRPHFLRLY*LKNVFM Trigger: CATGAACACATTCTTCAACAAGTAGAGTCTCAGAAA...GTGGGGTCGAGTGAGAGTGACCAGAGTGACAGGTCCAGAGCAACTTAGAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
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| CDS-3UTR CAA 90 bp | TTGTGTCTGTGTTTGGTGGTTGATTATGGGATGGATCACTGGATGGGGAGTCTCGAAGTTGTTGACTCTTaGGAAAACAAGGTATATAGC | + |
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Preference number: 5 (lower is better) Translates to: LCLCLVVDYGMDHWMGSLEVVDS*ENKVYS Trigger: GCTATATACCTTGTTTTCCAAAGAGTCAACAACTTC...GAGACTCCCCATCCAGTGATCCATCCCATAATCAACCACCAAACACAGACACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
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| CDS-3UTR CAA 90 bp | GGATGCCTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTTCCTCCAAAAGCAACTaGGTTCACTCAGACAGCACA | + |
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Preference number: 5 (lower is better) Translates to: GCLFSADSLYTHTSTYVPSSKSN*VHSDST Trigger: TGTGCTGTCTGAGTGAACCAAGTTGCTTTTGGAGGA...AGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAGGCATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| CDS-3UTR CAA 90 bp | ACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATAAGAGTCAGATATATCAGGAAAATGACATTCCCTTaGCAAATCTCCATCACTATC | + |
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Preference number: 5 (lower is better) Translates to: TSVFARHWHSLIRVRYIRKMTFP*QISITI Trigger: GATAGTGATGGAGATTTGCAAAGGGAATGTCATTTT...CCTGATATATCTGACTCTTATGAGGCTATGCCAGTGCCTGGCAAATACAGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| CDS-3UTR CAA 90 bp | ACAATTAGTGTGTGTGCATTTTTAGACTTCACCAGCAGAAGCTGTTTTGGTGCTCTGAGACTCTACTTGTaGAAGAATGTGTTCATGGTA | + |
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Preference number: 5 (lower is better) Translates to: TISVCAFLDFTSRSCFGALRLYL*KNVFMV Trigger: TACCATGAACACATTCTTCAACAAGTAGAGTCTCAG...AGCACCAAAACAGCTTCTGCTGGTGAAGTCTAAAAATGCACACACACTAATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
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| CDS-3UTR CAA 90 bp | ACAATTAGTGTGTGTGCATTTTTAGACTTCACCAGCAGAAGCTGTTTTGGTGCTATGACAGAGCCTTTATaGCAAAGAATGACAGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: TISVCAFLDFTSRSCFGAMTEPL*QRMTVF Trigger: GAAGACTGTCATTCTTTGCAATAAAGGCTCTGTCAT...AGCACCAAAACAGCTTCTGCTGGTGAAGTCTAAAAATGCACACACACTAATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
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| CDS CCA 90 bp | ATCTCCATCACTATCTTCACTATTCCTTATCCTCCAAAAGCAACTTaGTTCACTCAGACAGCACAAGATGAGAGAAAACTTCAGAAACAA | + |
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Preference number: 5 (lower is better) Translates to: ISITIFTIPYPPKAT*FTQTAQDERKLQKQ Trigger: TTGTTTCTGAAGTTTTCTCTCATCTTGTGCTGTCTGAGTGAACCAAGTTGCTTTTGGAGGATAAGGAATAGTGAAGATAGTGATGGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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| CDS-3UTR CAA 90 bp | TTCTACCTAGTATATTTTAAAGCTATTCCAAAGTTCAGCGCTTCTGCACTGTCAACAATGGGAGTATCCTaGTACTTCACAAATGTGACC | + |
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Preference number: 5 (lower is better) Translates to: FYLVYFKAIPKFSASALSTMGVS*YFTNVT Trigger: GGTCACATTTGTGAAGTACAAGGATACTCCCATTGT...TGACAGTGCAGAAGCGCTGAACTTTGGAATAGCTTTAAAATATACTAGGTAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094491.5 |
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| CDS-3UTR CAA 90 bp | CTCTTTAGTGCAGATTCATTGTATACACATACAAGCACTTATGTACCTACTGCAAAAATGACATTCCCTTaGCAAATCTCCATCACTATC | + |
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Preference number: 5 (lower is better) Translates to: LFSADSLYTHTSTYVPTAKMTFP*QISITI Trigger: GATAGTGATGGAGATTTGCAAAGGGAATGTCATTTT...TGCAGTAGGTACATAAGTGCTTGTATGTGTATACAATGAATCTGCACTAAAGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094491.5 ENSMUST00000233359.2 ENSMUST00000233504.2 |
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