Pregenerated sensors for VMN2R12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090688Ensembl transcript IDs: ENSMUST00000095922.5
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGGATCACTGCACTCTGCATGGCAGCATGGAAGTAAGCAAGCTTaGAAAGCTTCTAGCCTACACAACCATTTACTGGAAAGTGTAAAT | + |
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Preference number: 1 (lower is better) Translates to: EGSLHSAWQHGSKQA*KASSLHNHLLESVN Trigger: ATTTACACTTTCCAGTAAATGGTTGTGTAGGCTAGAAGCTTTGCAAGCTTGCTTACTTCCATGCTGCCATGCAGAGTGCAGTGATCCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR CCA 90 bp | ATCCATTCAGTAAGCACTAGTGAAATAAGAGGCCATGTGCATTTTTaGAGTGTATGGAGGGGCTATAAATGGTGTTCTGGAGATAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: IHSVSTSEIRGHVHF*SVWRGYKWCSGDRK Trigger: TTTCCTATCTCCAGAACACCATTTATAGCCCCTCCATACACTCCAAAAATGCACATGGCCTCTTATTTCACTAGTGCTTACTGAATGGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR CCA 90 bp | GTAAGCACTAGTGAAATAAGAGGCCATGTGCATTTTTGGAGTGTATaGAGGGGCTATAAATGGTGTTCTGGAGATAGGAAATATAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: VSTSEIRGHVHFWSV*RGYKWCSGDRKYKE Trigger: TTCTTTATATTTCCTATCTCCAGAACACCATTTATAGCCCCTCCATACACTCCAAAAATGCACATGGCCTCTTATTTCACTAGTGCTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR TCA 90 bp | TGTGAGAAAAGTCCTATTTCCCTATGTAACTTAGTCACAGTTAACTaGATGAAGTCAAGACAAGAACTTGGATGCAGACACTCAATGAGA | + |
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Preference number: 1 (lower is better) Translates to: CEKSPISLCNLVTVN*MKSRQELGCRHSMR Trigger: TCTCATTGAGTGTCTGCATCCAAGTTCTTGTCTTGACTTCATTCAGTTAACTGTGACTAAGTTACATAGGGAAATAGGACTTTTCTCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR-3UTR TCA 90 bp | CTGAAGAAGGATCACTGCACTCTGCATGGCAGCATGGAAGTAAGCAAGCTTGCAAGGATTATGTACACATaGCTGAGACCATTTTCCACT | + |
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Preference number: 2 (lower is better) Translates to: LKKDHCTLHGSMEVSKLARIMYT*LRPFST Trigger: AGTGGAAAATGGTCTCAGTCATGTGTACATAATCCT...TGCAAGCTTGCTTACTTCCATGCTGCCATGCAGAGTGCAGTGATCCTTCTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR-3UTR CCA 90 bp | CCCACAAAATATGACCTGAAGAAGGATCACTGCACTCTGCATGGCAGCATGGAAGTCAAGACAAGAACTTaGATGCAGACACTCAATGAG | + |
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Preference number: 2 (lower is better) Translates to: PTKYDLKKDHCTLHGSMEVKTRT*MQTLNE Trigger: CTCATTGAGTGTCTGCATCCAAGTTCTTGTCTTGAC...TTCCATGCTGCCATGCAGAGTGCAGTGATCCTTCTTCAGGTCATATTTTGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR-3UTR GCA 90 bp | ACTCTGCATGGCAGCATGGAAGTAAGCAAGCTTGCAAAGCTTCTAGCCTACACACACATAAAGTTCAAGTaGATTATACAGCAGGCACAA | + |
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Preference number: 2 (lower is better) Translates to: TLHGSMEVSKLAKLLAYTHIKFK*IIQQAQ Trigger: TTGTGCCTGCTGTATAATGCACTTGAACTTTATGTG...TGTGTAGGCTAGAAGCTTTGCAAGCTTGCTTACTTCCATGCTGCCATGCAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR-3UTR CCA 90 bp | CATTTTTGGAGTGTATGGAGGGGCTATAAATGGTGTTCTGGAGATAGGAAATATCAATTTGCCCAGAGGTaGCAATGTCACAGCAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: HFWSVWRGYKWCSGDRKYQFAQR*QCHSSR Trigger: CCTACTGCTGTGACATTGCCACCTCTGGGCAAATTG...ATATTTCCTATCTCCAGAACACCATTTATAGCCCCTCCATACACTCCAAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR CAA 90 bp | TCTGGGAATGGAGGAGGTTGTCATAATCAGGGAAGGGAAGAAATATaGGCCAGGTATTACCAAATAATGAGCCATCAGAACTCAAAAACA | + |
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Preference number: 2 (lower is better) Translates to: SGNGGGCHNQGREEI*ARYYQIMSHQNSKT Trigger: TGTTTTTGAGTTCTGATGGCTCATTATTTGGTAATACCTGGCCAATATTTCTTCCCTTCCCTGATTATGACAACCTCCTCCATTCCCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGGTTGTCATAATCAGGGAAGGGAAGAAATATTGGCCAGGTATTACCAAACATTTTTGGAGTGTATaGAGGGGCTATAAATGGTGT | + |
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Preference number: 2 (lower is better) Translates to: EEVVIIREGKKYWPGITKHFWSV*RGYKWC Trigger: ACACCATTTATAGCCCCTCCATACACTCCAAAAATG...TTTGGTAATACCTGGCCAATATTTCTTCCCTTCCCTGATTATGACAACCTCCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR-3UTR CCA 90 bp | CTACTCCAAGGTCCTTTCTTTGAAATGGAGCAAGTGATTGATTATCAGGTATTTGGCCATGTGCATTTTTaGAGTGTATGGAGGGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: LLQGPFFEMEQVIDYQVFGHVHF*SVWRGY Trigger: ATAGCCCCTCCATACACTCCAAAAATGCACATGGCC...AAATACCTGATAATCAATCACTTGCTCCATTTCAAAGAAAGGACCTTGGAGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR-3UTR TCA 90 bp | AAGCAAGCTTGCAAAGCTTCTAGCCTACACAACCATTTACTGGAAAGTGTAAATAGCTGTAACAAAACATaGTGGTCAAAAGAACCATGT | + |
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Preference number: 2 (lower is better) Translates to: KQACKASSLHNHLLESVNSCNKT*WSKEPC Trigger: ACATGGTTCTTTTGACCATCATGTTTTGTTACAGCT...ATTTACACTTTCCAGTAAATGGTTGTGTAGGCTAGAAGCTTTGCAAGCTTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR-3UTR GCA 90 bp | CTACTCCAAGGTCCTTTCTTTGAAATGGAGCAAGTGATTGATTATCAGGTATTTGGTCAAAGTGATGGTTaGATTCATCAACTAAGATTC | + |
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Preference number: 2 (lower is better) Translates to: LLQGPFFEMEQVIDYQVFGQSDG*IHQLRF Trigger: GAATCTTAGTTGATGAATGCAACCATCACTTTGACC...AAATACCTGATAATCAATCACTTGCTCCATTTCAAAGAAAGGACCTTGGAGTAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR GCA 72 bp | CTGCACTCTGCATGGCAGCATGGAAGTAAGCAAGCTTaGAAAGCTTCTAGCCTACACAACCATTTACTGGAA | + |
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Preference number: 3 (lower is better) Translates to: LHSAWQHGSKQA*KASSLHNHLLE Trigger: TTCCAGTAAATGGTTGTGTAGGCTAGAAGCTTTGCAAGCTTGCTTACTTCCATGCTGCCATGCAGAGTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR TCA 72 bp | CATGAAGTCTTACCAATAGACCCACAAAATATGACCTaGAGAAGGATCACTGCACTCTGCATGGCAGCATGG | + |
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Preference number: 3 (lower is better) Translates to: HEVLPIDPQNMT*RRITALCMAAW Trigger: CCATGCTGCCATGCAGAGTGCAGTGATCCTTCTTCAGGTCATATTTTGTGGGTCTATTGGTAAGACTTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR GCA 72 bp | CAAAATCTCAGGCCTCTGAGAGGGCCATCAACAATATaGAACACTGTAACTATGCTCCACACTCTCCTAATA | + |
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Preference number: 3 (lower is better) Translates to: QNLRPLRGPSTI*NTVTMLHTLLI Trigger: TATTAGGAGAGTGTGGAGCATAGTTACAGTGTTGCATATTGTTGATGGCCCTCTCAGAGGCCTGAGATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR GCA 72 bp | AATAGACCCACAAAATATGACCTGAAGAAGGATCACTaGACTCTGCATGGCAGCATGGAAGTAAGCAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: NRPTKYDLKKDH*TLHGSMEVSKL Trigger: AAGCTTGCTTACTTCCATGCTGCCATGCAGAGTGCAGTGATCCTTCTTCAGGTCATATTTTGTGGGTCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR TCA 72 bp | AGTCCTATTTCCCTATGTAACTTAGTCACAGTTAACTaGATGAAGTCAAGACAAGAACTTGGATGCAGACAC | + |
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Preference number: 3 (lower is better) Translates to: SPISLCNLVTVN*MKSRQELGCRH Trigger: GTGTCTGCATCCAAGTTCTTGTCTTGACTTCATTCAGTTAACTGTGACTAAGTTACATAGGGAAATAGGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR GCA 72 bp | TGGCTTAAACACATACCTACAGGTCAAAGTGATGGTTaGATTCATCAACTAAGATTCCTTATTCTCAATGTT | + |
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Preference number: 3 (lower is better) Translates to: WLKHIPTGQSDG*IHQLRFLILNV Trigger: AACATTGAGAATAAGGAATCTTAGTTGATGAATGCAACCATCACTTTGACCTGTAGGTATGTGTTTAAGCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR GCA 72 bp | TATAATGAAATGGTGTGTTTTCACATAAAGTTCAAGTaGATTATACAGCAGGCACAATCTGAACTCCACAGA | + |
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Preference number: 3 (lower is better) Translates to: YNEMVCFHIKFK*IIQQAQSELHR Trigger: TCTGTGGAGTTCAGATTGTGCCTGCTGTATAATGCACTTGAACTTTATGTGAAAACACACCATTTCATTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR TCA 90 bp | GAGGAGGTTGTCATAATCAGGGAAGGGAAGAAATATTGGCCAGGTATTACCAAACCTCCACAACCACCATaGCCGCTCCCCTGGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: EEVVIIREGKKYWPGITKPPQPP*PLPWCC Trigger: ACAGCACCAGGGGAGCGGTCATGGTGGTTGTGGAGG...TTTGGTAATACCTGGCCAATATTTCTTCCCTTCCCTGATTATGACAACCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR GCA 90 bp | TCTGAGAGGGCCATCAACAATATGCAACACTGTAACTATGCTCCACACTCTCCTTGGTCTGCTGCAGGATaGAGGTGGCCAGGTTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: SERAINNMQHCNYAPHSPWSAAG*RWPGWD Trigger: ATCCCAACCTGGCCACCTGCATCCTGCAGCAGACCA...AGGAGAGTGTGGAGCATAGTTACAGTGTTGCATATTGTTGATGGCCCTCTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR TCA 90 bp | ACTCTGCATGGCAGCATGGAAGTAAGCAAGCTTGCAAAGCTTCTAGCCTACACATCCTTGGTGGCTACCTaGTGGACATTGGGAAACAGG | + |
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Preference number: 4 (lower is better) Translates to: TLHGSMEVSKLAKLLAYTSLVAT*WTLGNR Trigger: CCTGTTTCCCAATGTCCATCAGGTAGCCACCAAGGA...TGTGTAGGCTAGAAGCTTTGCAAGCTTGCTTACTTCCATGCTGCCATGCAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR GCA 90 bp | ACTCTGCATGGCAGCATGGAAGTAAGCAAGCTTGCAAAGCTTCTAGCCTACACAGAATCCAGCAGTACATaGCACACTACACATGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: TLHGSMEVSKLAKLLAYTESSST*HTTHGG Trigger: TCCTCCATGTGTAGTGTGGCATGTACTGCTGGATTC...TGTGTAGGCTAGAAGCTTTGCAAGCTTGCTTACTTCCATGCTGCCATGCAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR CCA 90 bp | CTGAAGAAGGATCACTGCACTCTGCATGGCAGCATGGAAGTAAGCAAGCTTGCATCCTCCAAAAGCAAATaGGTTCAGTTAAGTGGTGCG | + |
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Preference number: 4 (lower is better) Translates to: LKKDHCTLHGSMEVSKLASSKSK*VQLSGA Trigger: CGCACCACTTAACTGAACCCATTTGCTTTTGGAGGA...TGCAAGCTTGCTTACTTCCATGCTGCCATGCAGAGTGCAGTGATCCTTCTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR CCA 90 bp | ATGAGAGCATGTGTAATAATGCTGATTACTGGCTTCATGTCTATGCCAAGTCCTGCTGCAGGATGCAGGTaGCCAGGTTGGGATGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: MRACVIMLITGFMSMPSPAAGCR*PGWDVQ Trigger: TTGGACATCCCAACCTGGCCACCTGCATCCTGCAGC...AGGACTTGGCATAGACATGAAGCCAGTAATCAGCATTATTACACATGCTCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR TCA 90 bp | GTAAATCTGGGAATGGAGGAGGTTGTCATAATCAGGGAAGGGAAGAAATATTGGAGACAGGGAGGAAGGTaGTCCAGACACTGCAGTACA | + |
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Preference number: 4 (lower is better) Translates to: VNLGMEEVVIIREGKKYWRQGGR*SRHCST Trigger: TGTACTGCAGTGTCTGGATCACCTTCCTCCCTGTCT...CCAATATTTCTTCCCTTCCCTGATTATGACAACCTCCTCCATTCCCAGATTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR GCA 90 bp | CTGAAGAAGGATCACTGCACTCTGCATGGCAGCATGGAAGTAAGCAAGCTTGCAGTCAAAGCAGCAGTCTaGTGTTTGTTTCCGATGAAT | + |
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Preference number: 4 (lower is better) Translates to: LKKDHCTLHGSMEVSKLAVKAAV*CLFPMN Trigger: ATTCATCGGAAACAAACAGCAGACTGCTGCTTTGAC...TGCAAGCTTGCTTACTTCCATGCTGCCATGCAGAGTGCAGTGATCCTTCTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR GCA 90 bp | ATGAGAGCATGTGTAATAATGCTGATTACTGGCTTCATGTCTATGCCAAGTCCTACTCCAAATGTGGTCTaGTGCAGGATGCAGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: MRACVIMLITGFMSMPSPTPNVV*CRMQVA Trigger: GGCCACCTGCATCCTGCAGCAGACCACATTTGGAGT...AGGACTTGGCATAGACATGAAGCCAGTAATCAGCATTATTACACATGCTCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR CAA 72 bp | ATGCCAAGTCCTCTTTCTTATAACTCCCAGAACAATTaGCCCAGAGGTGGCAATGTCACAGCAGTAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: MPSPLSYNSQNN*PRGGNVTAVGS Trigger: TGACCCTACTGCTGTGACATTGCCACCTCTGGGCAAATTGTTCTGGGAGTTATAAGAAAGAGGACTTGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR TCA 90 bp | GAACAATTTGCCCAGAGGTGGCAATGTCACAGCAGTAGGGTCACCTTATATGAAAGTACACCAGCATGCTaGAGGTTAGGAATTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: EQFAQRWQCHSSRVTLYESTPAC*RLGIWL Trigger: AAGCCAAATTCCTAACCTTCAGCATGCTGGTGTACT...TTCATATAAGGTGACCCTACTGCTGTGACATTGCCACCTCTGGGCAAATTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR CCA 90 bp | TCTGAGAGGGCCATCAACAATATGCAACACTGTAACTATGCTCCACACTCTCCTATGCCACACTACACATaGAGGAGGGAACTAATGTTC | + |
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Preference number: 4 (lower is better) Translates to: SERAINNMQHCNYAPHSPMPHYT*RRELMF Trigger: GAACATTAGTTCCCTCCTCCATGTGTAGTGTGGCAT...AGGAGAGTGTGGAGCATAGTTACAGTGTTGCATATTGTTGATGGCCCTCTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR CCA 90 bp | CTGAAGAAGGATCACTGCACTCTGCATGGCAGCATGGAAGTAAGCAAGCTTGCACAGTTTAGGATTAAATaGTCCAAAGAAAACCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LKKDHCTLHGSMEVSKLAQFRIK*SKENPW Trigger: CCAAGGGTTTTCTTTGGACCATTTAATCCTAAACTG...TGCAAGCTTGCTTACTTCCATGCTGCCATGCAGAGTGCAGTGATCCTTCTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR TCA 90 bp | CCCACAAAATATGACCTGAAGAAGGATCACTGCACTCTGCATGGCAGCATGGAATACAGATGTTTTCCATaGTGGTCCTATAAGGCTTAT | + |
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Preference number: 4 (lower is better) Translates to: PTKYDLKKDHCTLHGSMEYRCFP*WSYKAY Trigger: ATAAGCCTTATAGGACCATCATGGAAAACATCTGTA...TTCCATGCTGCCATGCAGAGTGCAGTGATCCTTCTTCAGGTCATATTTTGTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR CCA 90 bp | AGGTGGCAATGTCACAGCAGTAGGGTCACCTTATATGAAACATTAATTAGGAACACAAGTGTGTGTCCTTaGTGGCTACCTGATGGACAT | + |
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Preference number: 4 (lower is better) Translates to: RWQCHSSRVTLYETLIRNTSVCP*WLPDGH Trigger: ATGTCCATCAGGTAGCCACCAAGGACACACACTTGT...GTTCCTAATTAATGTTTCATATAAGGTGACCCTACTGCTGTGACATTGCCACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR CCA 90 bp | AGGTGGCAATGTCACAGCAGTAGGGTCACCTTATATGAAACATTAATTAGGAACAAGGAGACCATACCATaGGACAAGTGTGTGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: RWQCHSSRVTLYETLIRNKETIP*DKCVSL Trigger: CAAGGACACACACTTGTCCCATGGTATGGTCTCCTT...GTTCCTAATTAATGTTTCATATAAGGTGACCCTACTGCTGTGACATTGCCACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR CCA 90 bp | GAACAATTTGCCCAGAGGTGGCAATGTCACAGCAGTAGGGTCACCTTATATGAATATTGGCCTTCACAATaGGAGTATCCTTGTACTTCA | + |
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Preference number: 4 (lower is better) Translates to: EQFAQRWQCHSSRVTLYEYWPSQ*EYPCTS Trigger: TGAAGTACAAGGATACTCCCATTGTGAAGGCCAATA...TTCATATAAGGTGACCCTACTGCTGTGACATTGCCACCTCTGGGCAAATTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| 3UTR CAA 72 bp | GGAGGAGGTTGTCATAATCAGGGAAGGGAAGAAATATaGGCCAGGTATTACCAAATAATGAGCCATCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: GGGCHNQGREEI*ARYYQIMSHQN Trigger: GTTCTGATGGCTCATTATTTGGTAATACCTGGCCAATATTTCTTCCCTTCCCTGATTATGACAACCTCCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR GCA 90 bp | GAACAATTTGCCCAGAGGTGGCAATGTCACAGCAGTAGGGTCACCTTATATGAAGTTATATATGTGCAGTaGTGTCCATTCCAATGTGTT | + |
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Preference number: 4 (lower is better) Translates to: EQFAQRWQCHSSRVTLYEVIYVQ*CPFQCV Trigger: AACACATTGGAATGGACAGCACTGCACATATATAAC...TTCATATAAGGTGACCCTACTGCTGTGACATTGCCACCTCTGGGCAAATTGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR CCA 90 bp | CTACTCCAAGGTCCTTTCTTTGAAATGGAGCAAGTGATTGATTATCAGGTATTTAGTGTGTGTCCTTGGTaGCTACCTGATGGACATTGG | + |
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Preference number: 4 (lower is better) Translates to: LLQGPFFEMEQVIDYQVFSVCPW*LPDGHW Trigger: CCAATGTCCATCAGGTAGCCACCAAGGACACACACT...AAATACCTGATAATCAATCACTTGCTCCATTTCAAAGAAAGGACCTTGGAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR TCA 90 bp | AAGCAAGCTTGCAAAGCTTCTAGCCTACACAACCATTTACTGGAAAGTGTAAATAATGACACAGCTCTTTaGAGGCAGTGGGTTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: KQACKASSLHNHLLESVNNDTAL*RQWVFS Trigger: AGAGAAAACCCACTGCCTTCAAAGAGCTGTGTCATT...ATTTACACTTTCCAGTAAATGGTTGTGTAGGCTAGAAGCTTTGCAAGCTTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR CCA 90 bp | AGGTGGCAATGTCACAGCAGTAGGGTCACCTTATATGAAACATTAATTAGGAACGCAATATCACCTACATaGTGTGCAAAAGTGACAGTC | + |
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Preference number: 4 (lower is better) Translates to: RWQCHSSRVTLYETLIRNAISPT*CAKVTV Trigger: GACTGTCACTTTTGCACACCATGTAGGTGATATTGC...GTTCCTAATTAATGTTTCATATAAGGTGACCCTACTGCTGTGACATTGCCACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR TCA 90 bp | AAGCAAGCTTGCAAAGCTTCTAGCCTACACAACCATTTACTGGAAAGTGTAAATGCTGTTTGTTTCCGATaGATTTTCCTGAATCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: KQACKASSLHNHLLESVNAVCFR*IFLNPA Trigger: TGCTGGATTCAGGAAAATTCATCGGAAACAAACAGC...ATTTACACTTTCCAGTAAATGGTTGTGTAGGCTAGAAGCTTTGCAAGCTTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR GCA 90 bp | AAGCAAGCTTGCAAAGCTTCTAGCCTACACAACCATTTACTGGAAAGTGTAAATGGTTCAGTTAAGTGGTaGGAGATGAGAGAAAACTTC | + |
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Preference number: 4 (lower is better) Translates to: KQACKASSLHNHLLESVNGSVKW*EMRENF Trigger: GAAGTTTTCTCTCATCTCGCACCACTTAACTGAACC...ATTTACACTTTCCAGTAAATGGTTGTGTAGGCTAGAAGCTTTGCAAGCTTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR TCA 90 bp | CATTTTTGGAGTGTATGGAGGGGCTATAAATGGTGTTCTGGAGATAGGAAATATTCCAAATCATATATATaGAGTTGTTGGCTCCGTTGG | + |
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Preference number: 4 (lower is better) Translates to: HFWSVWRGYKWCSGDRKYSKSYI*SCWLRW Trigger: CCAACGGAGCCAACAACTTCATATATATGATTTGGA...ATATTTCCTATCTCCAGAACACCATTTATAGCCCCTCCATACACTCCAAAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR GCA 90 bp | GTAAATCTGGGAATGGAGGAGGTTGTCATAATCAGGGAAGGGAAGAAATATTGGCTTGTCATATATAACTaGATGTCTTCTGGGATCATA | + |
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Preference number: 4 (lower is better) Translates to: VNLGMEEVVIIREGKKYWLVIYN*MSSGII Trigger: TATGATCCCAGAAGACATGCAGTTATATATGACAAG...CCAATATTTCTTCCCTTCCCTGATTATGACAACCTCCTCCATTCCCAGATTTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR CCA 90 bp | AGGTGGCAATGTCACAGCAGTAGGGTCACCTTATATGAAACATTAATTAGGAACTTGGGAAACAGGTCATaGTTACTCAGTTTAGGATTA | + |
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Preference number: 4 (lower is better) Translates to: RWQCHSSRVTLYETLIRNLGNRS*LLSLGL Trigger: TAATCCTAAACTGAGTAACCATGACCTGTTTCCCAA...GTTCCTAATTAATGTTTCATATAAGGTGACCCTACTGCTGTGACATTGCCACCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR CAA 90 bp | CTGAAGAAGGATCACTGCACTCTGCATGGCAGCATGGAAGTAAGCAAGCTTGCAATGCAGGTGGCCAGGTaGGGATGTCCAATGAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: LKKDHCTLHGSMEVSKLAMQVAR*GCPMKS Trigger: GCTCTTCATTGGACATCCCAACCTGGCCACCTGCAT...TGCAAGCTTGCTTACTTCCATGCTGCCATGCAGAGTGCAGTGATCCTTCTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS TCA 90 bp | AAGGAGACCATACCATGGGACAAGTGTGTGTCCTTGGTGGCTACCTaGTGGACATTGGGAAACAGGTCATGGTTACTCAGTTTAGGATTA | + |
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Preference number: 5 (lower is better) Translates to: KETIPWDKCVSLVAT*WTLGNRSWLLSLGL Trigger: TAATCCTAAACTGAGTAACCATGACCTGTTTCCCAATGTCCATCAGGTAGCCACCAAGGACACACACTTGTCCCATGGTATGGTCTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS TCA 90 bp | CACAGTCAAAGCAGCAGTCTGCTGTTTGTTTCCGATGAATTTTCCTaGATCCAGCAGTACATGCCACACTACACATGGAGGAGGGAACTA | + |
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Preference number: 5 (lower is better) Translates to: HSQSSSLLFVSDEFS*IQQYMPHYTWRREL Trigger: TAGTTCCCTCCTCCATGTGTAGTGTGGCATGTACTGCTGGATTCAGGAAAATTCATCGGAAACAAACAGCAGACTGCTGCTTTGACTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS CCA 90 bp | ATAAAGGGAGGAGATGTTACCAACCAGATTCCACAGAGGACAAGTTaGATTAGGGTACAAATGGGAATGACCAAGTTAGGTGCCCCTGAT | + |
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Preference number: 5 (lower is better) Translates to: IKGGDVTNQIPQRTS*IRVQMGMTKLGAPD Trigger: ATCAGGGGCACCTAACTTGGTCATTCCCATTTGTACCCTAATCCAACTTGTCCTCTGTGGAATCTGGTTGGTAACATCTCCTCCCTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR CAA 90 bp | GAACAATTTGCCCAGAGGTGGCAATGTCACAGCAGTAGGGTCACCTTATATGAAAAAAGTGACAGTCCCTaGGAAGAAATCGAGGGTGAA | + |
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Preference number: 5 (lower is better) Translates to: EQFAQRWQCHSSRVTLYEKSDSP*EEIEGE Trigger: TTCACCCTCGATTTCTTCCAAGGGACTGTCACTTTT...TTCATATAAGGTGACCCTACTGCTGTGACATTGCCACCTCTGGGCAAATTGTTC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS TCA 90 bp | TGGTCATCATCTGAGATGACCAATCCTATCCAAGTCCATCTAAAATaGAGCATCAAGGAGACCATACCATGGGACAAGTGTGTGTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: WSSSEMTNPIQVHLK*SIKETIPWDKCVSL Trigger: CAAGGACACACACTTGTCCCATGGTATGGTCTCCTTGATGCTTCATTTTAGATGGACTTGGATAGGATTGGTCATCTCAGATGATGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR CAA 90 bp | ACTCTGCATGGCAGCATGGAAGTAAGCAAGCTTGCAAAGCTTCTAGCCTACACATTTGGGTACTTCTGTTaGCTGAGATTCTACTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: TLHGSMEVSKLAKLLAYTFGYFC*LRFYLL Trigger: CAACAAGTAGAATCTCAGCAAACAGAAGTACCCAAA...TGTGTAGGCTAGAAGCTTTGCAAGCTTGCTTACTTCCATGCTGCCATGCAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR CAA 90 bp | GAGGAGGTTGTCATAATCAGGGAAGGGAAGAAATATTGGCCAGGTATTACCAAAACAGATTCCATGTCCTaGCATTTCTTCTCTCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: EEVVIIREGKKYWPGITKTDSMS*HFFSQV Trigger: GACTTGAGAGAAGAAATGCAAGGACATGGAATCTGT...TTTGGTAATACCTGGCCAATATTTCTTCCCTTCCCTGATTATGACAACCTCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS TCA 90 bp | CAGATTCCATGTCCTTGCATTTCTTCTCTCAAGTCTGATAGAAACTaGATACACTGGTCATCATCTGAGATGACCAATCCTATCCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: QIPCPCISSLKSDRN*IHWSSSEMTNPIQV Trigger: GACTTGGATAGGATTGGTCATCTCAGATGATGACCAGTGTATTCAGTTTCTATCAGACTTGAGAGAAGAAATGCAAGGACATGGAATCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS GCA 90 bp | TGTTTGCAAGAAATTCCTAAAGTTAGCAATATCACCTACATGGTGTaGAAAAGTGACAGTCCCTTGGAAGAAATCGAGGGTGAAATCTTT | + |
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Preference number: 5 (lower is better) Translates to: CLQEIPKVSNITYMV*KSDSPLEEIEGEIF Trigger: AAAGATTTCACCCTCGATTTCTTCCAAGGGACTGTCACTTTTGCACACCATGTAGGTGATATTGCTAACTTTAGGAATTTCTTGCAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS CCA 90 bp | TTCATTGTTTGCAAGAAATTCCTAAAGTTAGCAATATCACCTACATaGTGTGCAAAAGTGACAGTCCCTTGGAAGAAATCGAGGGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: FIVCKKFLKLAISPT*CAKVTVPWKKSRVK Trigger: TTTCACCCTCGATTTCTTCCAAGGGACTGTCACTTTTGCACACCATGTAGGTGATATTGCTAACTTTAGGAATTTCTTGCAAACAATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS GCA 90 bp | CAGATTGTAACCTTCCTCACTCAGAACCATGTTATATATGTGCAGTaGTGTCCATTCCAATGTGTTGTTGAATGTAAAATGATCCTTTTT | + |
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Preference number: 5 (lower is better) Translates to: QIVTFLTQNHVIYVQ*CPFQCVVECKMILF Trigger: AAAAAGGATCATTTTACATTCAACAACACATTGGAATGGACAGCACTGCACATATATAACATGGTTCTGAGTGAGGAAGGTTACAATCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS CCA 90 bp | TCTTCATTATTCTTTATCCTCCAAAAGCAAATGGGTTCAGTTAAGTaGTGCGAGATGAGAGAAAACTTCAGGAGCATAAAGAATAGAATG | + |
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Preference number: 5 (lower is better) Translates to: SSLFFILQKQMGSVK*CEMRENFRSIKNRM Trigger: CATTCTATTCTTTATGCTCCTGAAGTTTTCTCTCATCTCGCACCACTTAACTGAACCCATTTGCTTTTGGAGGATAAAGAATAATGAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR CAA 90 bp | CTACTCCAAGGTCCTTTCTTTGAAATGGAGCAAGTGATTGATTATCAGGTATTTCATATATCTCAGCCCTaGTCATATATAACTGCATGT | + |
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Preference number: 5 (lower is better) Translates to: LLQGPFFEMEQVIDYQVFHISQP*SYITAC Trigger: ACATGCAGTTATATATGACAAGGGCTGAGATATATG...AAATACCTGATAATCAATCACTTGCTCCATTTCAAAGAAAGGACCTTGGAGTAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS-3UTR CAA 90 bp | CTACTCCAAGGTCCTTTCTTTGAAATGGAGCAAGTGATTGATTATCAGGTATTTATCATATATATGAAGTaGTTGGCTCCGTTGGTAACA | + |
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Preference number: 5 (lower is better) Translates to: LLQGPFFEMEQVIDYQVFIIYMK*LAPLVT Trigger: TGTTACCAACGGAGCCAACAACTTCATATATATGAT...AAATACCTGATAATCAATCACTTGCTCCATTTCAAAGAAAGGACCTTGGAGTAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS GCA 90 bp | TCATTATTCTTTATCCTCCAAAAGCAAATGGGTTCAGTTAAGTGGTaGGAGATGAGAGAAAACTTCAGGAGCATAAAGAATAGAATGAAA | + |
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Preference number: 5 (lower is better) Translates to: SLFFILQKQMGSVKW*EMRENFRSIKNRMK Trigger: TTTCATTCTATTCTTTATGCTCCTGAAGTTTTCTCTCATCTCGCACCACTTAACTGAACCCATTTGCTTTTGGAGGATAAAGAATAATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS CAA 72 bp | CCAAATGTGGTCTGCTGCAGGATGCAGGTGGCCAGGTaGGGATGTCCAATGAAGAGCAATGGGCAGAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: PNVVCCRMQVAR*GCPMKSNGQRK Trigger: TTTTCTCTGCCCATTGCTCTTCATTGGACATCCCAACCTGGCCACCTGCATCCTGCAGCAGACCACATTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS CCA 72 bp | AGGAGACCATACCATGGGACAAGTGTGTGTCCTTGGTaGCTACCTGATGGACATTGGGAAACAGGTCATGGT | + |
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Preference number: 6 (lower is better) Translates to: RRPYHGTSVCPW*LPDGHWETGHG Trigger: ACCATGACCTGTTTCCCAATGTCCATCAGGTAGCCACCAAGGACACACACTTGTCCCATGGTATGGTCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS TCA 72 bp | ATACCATGGGACAAGTGTGTGTCCTTGGTGGCTACCTaGTGGACATTGGGAAACAGGTCATGGTTACTCAGT | + |
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Preference number: 6 (lower is better) Translates to: IPWDKCVSLVAT*WTLGNRSWLLS Trigger: ACTGAGTAACCATGACCTGTTTCCCAATGTCCATCAGGTAGCCACCAAGGACACACACTTGTCCCATGGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS CAA 90 bp | AAAAATACTCCAAATGTGGTCTGCTGCAGGATGCAGGTGGCCAGGTaGGGATGTCCAATGAAGAGCAATGGGCAGAGAAAACAGAAGACT | + |
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Preference number: 6 (lower is better) Translates to: KNTPNVVCCRMQVAR*GCPMKSNGQRKQKT Trigger: AGTCTTCTGTTTTCTCTGCCCATTGCTCTTCATTGGACATCCCAACCTGGCCACCTGCATCCTGCAGCAGACCACATTTGGAGTATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS CCA 72 bp | CACTACACATGGAGGAGGGAACTAATGTTCCTCCTGTaGCCCACTCCAAATCATATATATGAAGTTGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: HYTWRRELMFLL*PTPNHIYEVVG Trigger: GCCAACAACTTCATATATATGATTTGGAGTGGGCCACAGGAGGAACATTAGTTCCCTCCTCCATGTGTAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS CAA 72 bp | TCCTTTGGGTACTTCTGTTTGCTGAGATTCTACTTGTaGAAGAATGAGTTCATGGTAGGTGTGGGCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: SFGYFCLLRFYL*KNEFMVGVGHS Trigger: GCTGTGGCCCACACCTACCATGAACTCATTCTTCAACAAGTAGAATCTCAGCAAACAGAAGTACCCAAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS CAA 90 bp | AGTGAATGTTCCTTTGGGTACTTCTGTTTGCTGAGATTCTACTTGTaGAAGAATGAGTTCATGGTAGGTGTGGGCCACAGCATACACAGC | + |
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Preference number: 6 (lower is better) Translates to: SECSFGYFCLLRFYL*KNEFMVGVGHSIHS Trigger: GCTGTGTATGCTGTGGCCCACACCTACCATGAACTCATTCTTCAACAAGTAGAATCTCAGCAAACAGAAGTACCCAAAGGAACATTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS CAA 90 bp | GTCAGTGAATGTTCCTTTGGGTACTTCTGTTTGCTGAGATTCTACTaGTTGAAGAATGAGTTCATGGTAGGTGTGGGCCACAGCATACAC | + |
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Preference number: 6 (lower is better) Translates to: VSECSFGYFCLLRFY*LKNEFMVGVGHSIH Trigger: GTGTATGCTGTGGCCCACACCTACCATGAACTCATTCTTCAACAAGTAGAATCTCAGCAAACAGAAGTACCCAAAGGAACATTCACTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS TCA 72 bp | TGGATTTCAGCATGGAAGACACCTGCTGACAGTCAGTaGATGTTCCTTTGGGTACTTCTGTTTGCTGAGATT | + |
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Preference number: 6 (lower is better) Translates to: WISAWKTPADSQ*MFLWVLLFAEI Trigger: AATCTCAGCAAACAGAAGTACCCAAAGGAACATTCACTGACTGTCAGCAGGTGTCTTCCATGCTGAAATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS TCA 72 bp | ACACAGTCAAAGCAGCAGTCTGCTGTTTGTTTCCGATaGATTTTCCTGAATCCAGCAGTACATGCCACACTA | + |
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Preference number: 6 (lower is better) Translates to: TQSKQQSAVCFR*IFLNPAVHATL Trigger: TAGTGTGGCATGTACTGCTGGATTCAGGAAAATTCATCGGAAACAAACAGCAGACTGCTGCTTTGACTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS CCA 72 bp | GACACCTCACACACTGTTCCATATCTGCTGTTTCATTaGAAACCTCATTTTCTGGGCACTGAACACAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: DTSHTVPYLLFH*KPHFLGTEHSQ Trigger: TTGACTGTGTTCAGTGCCCAGAAAATGAGGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTGAGGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS CCA 72 bp | GGAGATGTTACCAACCAGATTCCACAGAGGACAAGTTaGATTAGGGTACAAATGGGAATGACCAAGTTAGGT | + |
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Preference number: 6 (lower is better) Translates to: GDVTNQIPQRTS*IRVQMGMTKLG Trigger: ACCTAACTTGGTCATTCCCATTTGTACCCTAATCCAACTTGTCCTCTGTGGAATCTGGTTGGTAACATCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS CAA 72 bp | TGTTCCTTTGGGTACTTCTGTTTGCTGAGATTCTACTaGTTGAAGAATGAGTTCATGGTAGGTGTGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: CSFGYFCLLRFY*LKNEFMVGVGH Trigger: GTGGCCCACACCTACCATGAACTCATTCTTCAACAAGTAGAATCTCAGCAAACAGAAGTACCCAAAGGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS CAA 72 bp | TCCTCCTGTGGCCCACTCCAAATCATATATATGAAGTaGTTGGCTCCGTTGGTAACAAGGCAAATAGTATCC | + |
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Preference number: 6 (lower is better) Translates to: SSCGPLQIIYMK*LAPLVTRQIVS Trigger: GGATACTATTTGCCTTGTTACCAACGGAGCCAACAACTTCATATATATGATTTGGAGTGGGCCACAGGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS CAA 90 bp | AGACACCTGCTGACAGTCAGTGAATGTTCCTTTGGGTACTTCTGTTaGCTGAGATTCTACTTGTTGAAGAATGAGTTCATGGTAGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: RHLLTVSECSFGYFC*LRFYLLKNEFMVGV Trigger: CACACCTACCATGAACTCATTCTTCAACAAGTAGAATCTCAGCAAACAGAAGTACCCAAAGGAACATTCACTGACTGTCAGCAGGTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS TCA 72 bp | GTAAATATCCTGGATTTCAGCATGGAAGACACCTGCTaGCAGTCAGTGAATGTTCCTTTGGGTACTTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: VNILDFSMEDTC*QSVNVPLGTSV Trigger: AACAGAAGTACCCAAAGGAACATTCACTGACTGTCAGCAGGTGTCTTCCATGCTGAAATCCAGGATATTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS GCA 72 bp | GAAATTCCTAAAGTTAGCAATATCACCTACATGGTGTaGAAAAGTGACAGTCCCTTGGAAGAAATCGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: EIPKVSNITYMV*KSDSPLEEIEG Trigger: ACCCTCGATTTCTTCCAAGGGACTGTCACTTTTGCACACCATGTAGGTGATATTGCTAACTTTAGGAATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS CAA 72 bp | AGAATGCGGTTATTGGCCTTCACAATGGGAGTATCCTaGTACTTCACAAAAGTGACTAGTACTAGAACCATG | + |
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Preference number: 6 (lower is better) Translates to: RMRLLAFTMGVS*YFTKVTSTRTM Trigger: CATGGTTCTAGTACTAGTCACTTTTGTGAAGTACAAGGATACTCCCATTGTGAAGGCCAATAACCGCATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS TCA 72 bp | TGTCCTTGCATTTCTTCTCTCAAGTCTGATAGAAACTaGATACACTGGTCATCATCTGAGATGACCAATCCT | + |
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Preference number: 6 (lower is better) Translates to: CPCISSLKSDRN*IHWSSSEMTNP Trigger: AGGATTGGTCATCTCAGATGATGACCAGTGTATTCAGTTTCTATCAGACTTGAGAGAAGAAATGCAAGGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS CCA 72 bp | TGCAAGAAATTCCTAAAGTTAGCAATATCACCTACATaGTGTGCAAAAGTGACAGTCCCTTGGAAGAAATCG | + |
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Preference number: 6 (lower is better) Translates to: CKKFLKLAISPT*CAKVTVPWKKS Trigger: CGATTTCTTCCAAGGGACTGTCACTTTTGCACACCATGTAGGTGATATTGCTAACTTTAGGAATTTCTTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS CAA 72 bp | CTGACAGTCAGTGAATGTTCCTTTGGGTACTTCTGTTaGCTGAGATTCTACTTGTTGAAGAATGAGTTCATG | + |
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Preference number: 6 (lower is better) Translates to: LTVSECSFGYFC*LRFYLLKNEFM Trigger: CATGAACTCATTCTTCAACAAGTAGAATCTCAGCAAACAGAAGTACCCAAAGGAACATTCACTGACTGTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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| CDS GCA 72 bp | ACCTTCCTCACTCAGAACCATGTTATATATGTGCAGTaGTGTCCATTCCAATGTGTTGTTGAATGTAAAATG | + |
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Preference number: 6 (lower is better) Translates to: TFLTQNHVIYVQ*CPFQCVVECKM Trigger: CATTTTACATTCAACAACACATTGGAATGGACAGCACTGCACATATATAACATGGTTCTGAGTGAGGAAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095922.5 |
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