Pregenerated sensors for VMN2R118 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091504Ensembl transcript IDs: ENSMUST00000168440.3, ENSMUST00000234082.2, ENSMUST00000234172.2, ENSMUST00000234385.2
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCAGACAGCCAAGGTATCCCAGCACAGAGTAGAAGGCTATAAGTaGGCCCTTGTTGCACATAATGATGATGTGGCCATGTTCAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: CQTAKVSQHRVEGYK*ALVAHNDDVAMFSV Trigger: CACACTGAACATGGCCACATCATCATTATGTGCAACAAGGGCTCACTTATAGCCTTCTACTCTGTGCTGGGATACCTTGGCTGTCTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR TCA 90 bp | CTGCAGGAGACATCTGGCTGTGCTAGGATGTCCGATGAAGAACAATaGGCAGAGAAAACAAAGTGTGAGAGAAATGAGCAGGATGTAGCT | + |
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Preference number: 1 (lower is better) Translates to: LQETSGCARMSDEEQ*AEKTKCERNEQDVA Trigger: AGCTACATCCTGCTCATTTCTCTCACACTTTGTTTTCTCTGCTCATTGTTCTTCATCGGACATCCTAGCACAGCCAGATGTCTCCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR CCA 90 bp | CCAGATATGTCACAACCTTTGGGAAGCAGTGATTTCTCTCTATGTTaGCATATTGACCATCTGGACACTTCACACATTGTGTTAGATCTG | + |
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Preference number: 1 (lower is better) Translates to: PDMSQPLGSSDFSLC*HIDHLDTSHIVLDL Trigger: CAGATCTAACACAATGTGTGAAGTGTCCAGATGGTCAATATGCCAACATAGAGAGAAATCACTGCTTCCCAAAGGTTGTGACATATCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR TCA 90 bp | CAGACTCCATTTCTTTGCATTTCTTCTTTTATATCTAAGAGAAATTaGATACCTTGGTCATCATCTTGGATGACTAGTCCTACCCATATC | + |
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Preference number: 1 (lower is better) Translates to: QTPFLCISSFISKRN*IPWSSSWMTSPTHI Trigger: GATATGGGTAGGACTAGTCATCCAAGATGATGACCAAGGTATTCAATTTCTCTTAGATATAAAAGAAGAAATGCAAAGAAATGGAGTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCTCCACAGGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCACCATGGCCTTCCCTTTaGTGCTGTGGTGGACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: EGSTGRKYALILNEKVSPPWPSL*CCGGQG Trigger: TCCCTGTCCACCACAGCACCAAAGGGAAGGCCATGG...TGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCCTGTGGAGCCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGCCATAATGAAGCTTGCTAGTGCCAGACAGCCAAGGTATCCCAGCACAGAGCTACCCATATCCAGCTaGAATGGAACAGCAAGGATA | + |
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Preference number: 2 (lower is better) Translates to: KAIMKLASARQPRYPSTELPISS*NGTARI Trigger: TATCCTTGCTGTTCCATTTCAGCTGGATATGGGTAG...CTCTGTGCTGGGATACCTTGGCTGTCTGGCACTAGCAAGCTTCATTATGGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCTCCACAGGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCATTCCCTTTGGTGCTGTaGTGGACAGGGAGGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: EGSTGRKYALILNEKVSPFPLVL*WTGRKV Trigger: CACCTTCCTCCCTGTCCACCACAGCACCAAAGGGAA...TGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCCTGTGGAGCCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR TCA 90 bp | GGACATATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACAGACATATGTCAGGCCTaGCCACCTTTGCCATCAATT | + |
|
Preference number: 2 (lower is better) Translates to: GHMSGLTTFAINSTSVHTDICQA*PPLPSI Trigger: AATTGATGGCAAAGGTGGTCAGGCCTGACATATGTC...TGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATATGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR GCA 90 bp | GCATGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTTTGAAGTGGCCTTCCCTTTGGTaGTGTGGTGGACAGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: AWLYQEVNPLTCLSLALKWPSLW*CGGQGG Trigger: TCCTCCCTGTCCACCACAGCACCAAAGGGAAGGCCA...CTTCAAAGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTATCCATTTGATGGACAGGGCAGAAGGCTCCACAGGCAGAAAATATGCCCTCACTCCTGCATTAGTTaGGTCACATTTTCCAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: MYPFDGQGRRLHRQKICPHSCIS*VTFSSC Trigger: GCAACTGGAAAATGTGACCCAACTAATGCAGGAGTG...AGGGCATATTTTCTGCCTGTGGAGCCTTCTGCCCTGTCCATCAAATGGATACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGCCATAATGAAGCTTGCTAGTGCCAGACAGCCAAGGTATCCCAGCACAGAGACAAAATTGCCCAAATaGCTCATAAGTCCACAGACA | + |
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Preference number: 2 (lower is better) Translates to: KAIMKLASARQPRYPSTETKLPK*LISPQT Trigger: TGTCTGTGGACTTATGAGGCATTTGGGCAATTTTGT...CTCTGTGCTGGGATACCTTGGCTGTCTGGCACTAGCAAGCTTCATTATGGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR GCA 90 bp | GGACATATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACAGCCATGTCAAAACTGTaGCGTGGTAACCATTCCAAT | + |
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Preference number: 2 (lower is better) Translates to: GHMSGLTTFAINSTSVHTAMSKL*RGNHSN Trigger: ATTGGAATGGTTACCACGGCACAGTTTTGACATGGC...TGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATATGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR GCA 90 bp | TATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACATAGTTCCAAAAGTGATCTGCTaGAGGAGACATCTGGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: YVRPDHLCHQFHKCTYIVPKVIC*RRHLAV Trigger: CACAGCCAGATGTCTCCTGCAGCAGATCACTTTTGG...AACTATGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTTTGAAGTTTTGGCCTTCCCTTTGGTaGTGTGGTGGACAGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: WLYQEVNPLTCLSLALKFWPSLW*CGGQGG Trigger: TCCTCCCTGTCCACCACAGCACCAAAGGGAAGGCCA...AAACTTCAAAGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR CCA 90 bp | GGACATATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACATATCCTGAGGCCCATTaGATCATGTCCTCATATAAG | + |
|
Preference number: 2 (lower is better) Translates to: GHMSGLTTFAINSTSVHTYPEAH*IMSSYK Trigger: CTTATATGAGGACATGATCCAATGGGCCTCAGGATA...TGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATATGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR TCA 90 bp | AACCTTTGGGAAGCAGTGATTTCTCTCTATGTTGGCATATTGACCATCTGGACACTACCCATATCCAGCTaGAATGGAACAGCAAGGATA | + |
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Preference number: 2 (lower is better) Translates to: NLWEAVISLYVGILTIWTLPISS*NGTARI Trigger: TATCCTTGCTGTTCCATTTCAGCTGGATATGGGTAG...TGTCCAGATGGTCAATATGCCAACATAGAGAGAAATCACTGCTTCCCAAAGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGGCTCCACAGGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCAACCTTTGGGAAGCAGTaGTTTCTCTCTATGTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: EGSTGRKYALILNEKVSPTFGKQ*FLSMLA Trigger: TGCCAACATAGAGAGAAATCACTGCTTCCCAAAGGT...TGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCCTGTGGAGCCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR GCA 90 bp | GGACATATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACAACAAAATTGCCCAAATaGCTCATAAGTCCACAGACA | + |
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Preference number: 2 (lower is better) Translates to: GHMSGLTTFAINSTSVHTTKLPK*LISPQT Trigger: TGTCTGTGGACTTATGAGGCATTTGGGCAATTTTGT...TGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATATGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGGCTCCACAGGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCACATGTTTTCCAAGAATaGATGGATCTGCACGCACTC | + |
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Preference number: 2 (lower is better) Translates to: EGSTGRKYALILNEKVSPHVFQE*MDLHAL Trigger: GAGTGCGTGCAGATCCATGCATTCTTGGAAAACATG...TGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCCTGTGGAGCCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR GCA 90 bp | TATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACATAGTTCATGTTTTCCAAGAATaGATGGATCTGCACGCACTC | + |
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Preference number: 2 (lower is better) Translates to: YVRPDHLCHQFHKCTYIVHVFQE*MDLHAL Trigger: GAGTGCGTGCAGATCCATGCATTCTTGGAAAACATG...AACTATGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCTCCACAGGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCACACTCCTGCATTAGTTaGGTCACATTTTCCAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: EGSTGRKYALILNEKVSPHSCIS*VTFSSC Trigger: GCAACTGGAAAATGTGACCCAACTAATGCAGGAGTG...TGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCCTGTGGAGCCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAGAAGGCTCCACAGGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTAATATGTCACAACCTTTaGGAAGCAGTGATTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: RAEGSTGRKYALILNEKVICHNL*EAVISL Trigger: GAGAGAAATCACTGCTTCCCAAAGGTTGTGACATAT...TACTTTTTCATTCAGAATGAGGGCATATTTTCTGCCTGTGGAGCCTTCTGCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTATCCATTTGATGGACAGGGCAGAAGGCTCCACAGGCAGAAAATATGCCCTACAATGGGAGTGTATTaGTTTTTCACAAAGATTCCT | + |
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Preference number: 2 (lower is better) Translates to: MYPFDGQGRRLHRQKICPTMGVY*FFTKIP Trigger: AGGAATCTTTGTGAAAAACCAATACACTCCCATTGT...AGGGCATATTTTCTGCCTGTGGAGCCTTCTGCCCTGTCCATCAAATGGATACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR CCA 90 bp | GGACACTTCACACATTGTGTTAGATCTGTGGCATTTGAAATCTCATTTTCAGGGTTCCCAGAGACACATTaGGTAAAAGGTAGGGGTTAC | + |
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Preference number: 2 (lower is better) Translates to: GHFTHCVRSVAFEISFSGFPETH*VKGRGY Trigger: GTAACCCCTACCTTTTACCCAATGTGTCTCTGGGAA...CCCTGAAAATGAGATTTCAAATGCCACAGATCTAACACAATGTGTGAAGTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234172.2 |
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| 3UTR CAA 90 bp | ATTGACCATCTGGACACTTCACACATTGTGTTAGATCTGTGGCATTaGAAATCTCATTTTCAGGGCAAGGAGAACAATCAAAACAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: IDHLDTSHIVLDLWH*KSHFQGKENNQNSR Trigger: CCTGCTGTTTTGATTGTTCTCCTTGCCCTGAAAATGAGATTTCAAATGCCACAGATCTAACACAATGTGTGAAGTGTCCAGATGGTCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGCAGAAGGCTCCACAGGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTAAAACACCTGAATGTTTaGGTCTTTTCTAGGTCATCT | + |
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Preference number: 2 (lower is better) Translates to: RAEGSTGRKYALILNEKVKHLNV*VFSRSS Trigger: AGATGACCTAGAAAAGACTCAAACATTCAGGTGTTT...TACTTTTTCATTCAGAATGAGGGCATATTTTCTGCCTGTGGAGCCTTCTGCCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCCATTTAACTCTTCTTCCTGGAATAGTAATGCTAAAGGCCAGAAGTACAGTGCCATGTCAAAACTGTaGCGTGGTAACCATTCCAAT | + |
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Preference number: 2 (lower is better) Translates to: KPFNSSSWNSNAKGQKYSAMSKL*RGNHSN Trigger: ATTGGAATGGTTACCACGGCACAGTTTTGACATGGC...ACTGTACTTCTGGCCTTTAGCATTACTATTCCAGGAAGAAGAGTTAAATGGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCCATTTAACTCTTCTTCCTGGAATAGTAATGCTAAAGGCCAGAAGTACAGTCATGTTTTCCAAGAATaGATGGATCTGCACGCACTC | + |
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Preference number: 2 (lower is better) Translates to: KPFNSSSWNSNAKGQKYSHVFQE*MDLHAL Trigger: GAGTGCGTGCAGATCCATGCATTCTTGGAAAACATG...ACTGTACTTCTGGCCTTTAGCATTACTATTCCAGGAAGAAGAGTTAAATGGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCAACATTTATTGCTCAGTGGACCTGTAAGTaGTATTTCACATGCACCGGG | + |
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Preference number: 2 (lower is better) Translates to: GRKYALILNEKVSPTFIAQWTCK*YFTCTG Trigger: CCCGGTGCATGTGAAATAGCACTTACAGGTCCACTG...AGCAATAAATGTTGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234172.2 |
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| 3UTR-3UTR CCA 90 bp | TATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACATAGTTTTGCTGGATGTGCACTaGTTTGGTGTTTTACAGTTA | + |
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Preference number: 2 (lower is better) Translates to: YVRPDHLCHQFHKCTYIVLLDVH*FGVLQL Trigger: TAACTGTAAAACACCAAACCAGTGCACATCCAGCAA...AACTATGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR TCA 90 bp | AACCTTTGGGAAGCAGTGATTTCTCTCTATGTTGGCATATTGACCATCTGGACAAAACACCTGAATGTTTaGGTCTTTTCTAGGTCATCT | + |
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Preference number: 2 (lower is better) Translates to: NLWEAVISLYVGILTIWTKHLNV*VFSRSS Trigger: AGATGACCTAGAAAAGACTCAAACATTCAGGTGTTT...TGTCCAGATGGTCAATATGCCAACATAGAGAGAAATCACTGCTTCCCAAAGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACATAGTTTGCCCTCATTCTGAATaGAAAAGTATCTCCAACATT | + |
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Preference number: 2 (lower is better) Translates to: YVRPDHLCHQFHKCTYIVCPHSE*KSISNI Trigger: AATGTTGGAGATACTTTTTCATTCAGAATGAGGGCA...AACTATGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR TCA 90 bp | ACCATAATCCTATGTCATAAATTAGCATGGCTTTATCAAGAGGTAAATCCTCTGGACATATGTCAGGCCTaGCCACCTTTGCCATCAATT | + |
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Preference number: 2 (lower is better) Translates to: TIILCHKLAWLYQEVNPLDICQA*PPLPSI Trigger: AATTGATGGCAAAGGTGGTCAGGCCTGACATATGTC...CAGAGGATTTACCTCTTGATAAAGCCATGCTAATTTATGACATAGGATTATGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR TCA 90 bp | TCCATAGGTAATCTGTCTTACCTGTGGGATGAACTTGAGCTGAAGAATTGTTGCATCTCCATGATATTGTaGAATAGTGAGAGTCCCATA | + |
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Preference number: 2 (lower is better) Translates to: SIGNLSYLWDELELKNCCISMIL*NSESPI Trigger: TATGGGACTCTCACTATTTCACAATATCATGGAGAT...GCAACAATTCTTCAGCTCAAGTTCATCCCACAGGTAAGACAGATTACCTATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234172.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCCATTTAACTCTTCTTCCTGGAATAGTAATGCTAAAGGCCAGAAGTACATCTATGTTGGCATATTaGCCATCTGGACACTTCACA | + |
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Preference number: 2 (lower is better) Translates to: RSHLTLLPGIVMLKARSTSMLAY*PSGHFT Trigger: TGTGAAGTGTCCAGATGGTCAATATGCCAACATAGA...TGTACTTCTGGCCTTTAGCATTACTATTCCAGGAAGAAGAGTTAAATGGCTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGGAGTGTATTGGTTTTTCACAAAGATTCCTAGAACAAGAACTGACAACATGACCTTTGGGAAGCAGTaGTTTCTCTCTATGTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: MGVYWFFTKIPRTRTDNMTFGKQ*FLSMLA Trigger: TGCCAACATAGAGAGAAATCACTGCTTCCCAAAGGT...CATGTTGTCAGTTCTTGTTCTAGGAATCTTTGTGAAAAACCAATACACTCCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCCATTTAACTCTTCTTCCTGGAATAGTAATGCTAAAGGCCAGAAGTACAGTTATCCTGAGGCCCATTaGATCATGTCCTCATATAAG | + |
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Preference number: 2 (lower is better) Translates to: KPFNSSSWNSNAKGQKYSYPEAH*IMSSYK Trigger: CTTATATGAGGACATGATCCAATGGGCCTCAGGATA...ACTGTACTTCTGGCCTTTAGCATTACTATTCCAGGAAGAAGAGTTAAATGGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAGAAGGCTCCACAGGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTAAAAAAGGGAACAGATTaGAATGATGACTTTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: RAEGSTGRKYALILNEKVKKGTD*NDDFVC Trigger: ACACACAAAGTCATCATTCCAATCTGTTCCCTTTTT...TACTTTTTCATTCAGAATGAGGGCATATTTTCTGCCTGTGGAGCCTTCTGCCCT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR TCA 90 bp | GCATGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTTTGAAGCTTTCTCCAAAGAATTaGCCACATGGTCTTCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: AWLYQEVNPLTCLSLALKLSPKN*PHGLPN Trigger: ATTTGGAAGACCATGTGGTCAATTCTTTGGAGAAAG...CTTCAAAGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTTTGAAGTTTATTCATGTATCCATTTaGTGGACAGGGCAGAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: WLYQEVNPLTCLSLALKFIHVSI*WTGQKA Trigger: AGCCTTCTGCCCTGTCCATCAAATGGATACATGAAT...AAACTTCAAAGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTTTGAAGTTTACCTTTGGGAAGCAGTaGTTTCTCTCTATGTTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: WLYQEVNPLTCLSLALKFTFGKQ*FLSMLA Trigger: TGCCAACATAGAGAGAAATCACTGCTTCCCAAAGGT...AAACTTCAAAGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAAGCCATTTAACTCTTCTTCCTGGAATAGTAATGCTAAAGGCCAGAAGTACATCCGATGAAGAACAATaGGCAGAGAAAACAAAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: RSHLTLLPGIVMLKARSTSDEEQ*AEKTKC Trigger: ACACTTTGTTTTCTCTGCTCATTGTTCTTCATCGGA...TGTACTTCTGGCCTTTAGCATTACTATTCCAGGAAGAAGAGTTAAATGGCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTTTGAAGTTTGGGATGAACTTGAGCTaGAGAATTGTTGCCACTTGT | + |
|
Preference number: 2 (lower is better) Translates to: WLYQEVNPLTCLSLALKFGMNLS*RIVATC Trigger: ACAAGTGGCAACAATTCTTCAGCTCAAGTTCATCCC...AAACTTCAAAGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234172.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTAACTTCTAACAAAATTGCCCAAATGCCTCATAAGTCCACAGACATTCCATTGCTGGATGTGCACTaGTTTGGTGTTTTACAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: LLTSNKIAQMPHKSTDIPLLDVH*FGVLQL Trigger: TAACTGTAAAACACCAAACCAGTGCACATCCAGCAA...TGGAATGTCTGTGGACTTATGAGGCATTTGGGCAATTTTGTTAGAAGTTAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCATAATCCTATGTCATAAATTAGCATGGCTTTATCAAGAGGTAAATCCTCTGCACTCCTGCATTAGTTaGGTCACATTTTCCAGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: TIILCHKLAWLYQEVNPLHSCIS*VTFSSC Trigger: GCAACTGGAAAATGTGACCCAACTAATGCAGGAGTG...CAGAGGATTTACCTCTTGATAAAGCCATGCTAATTTATGACATAGGATTATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTAACTTCTAACAAAATTGCCCAAATGCCTCATAAGTCCACAGACATTCCAGATTTCTCTCTATGTTaGCATATTGACCATCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: LLTSNKIAQMPHKSTDIPDFSLC*HIDHLD Trigger: GTCCAGATGGTCAATATGCCAACATAGAGAGAAATC...TGGAATGTCTGTGGACTTATGAGGCATTTGGGCAATTTTGTTAGAAGTTAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCATAATCCTATGTCATAAATTAGCATGGCTTTATCAAGAGGTAAATCCTCTGTCTATGTTGGCATATTaGCCATCTGGACACTTCACA | + |
|
Preference number: 2 (lower is better) Translates to: TIILCHKLAWLYQEVNPLSMLAY*PSGHFT Trigger: TGTGAAGTGTCCAGATGGTCAATATGCCAACATAGA...CAGAGGATTTACCTCTTGATAAAGCCATGCTAATTTATGACATAGGATTATGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR TCA 90 bp | GGAGTGTATTGGTTTTTCACAAAGATTCCTAGAACAAGAACTGACAACATGGATGGCCTTTACTGTTTTTaGAAGTCCAGTAAACTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: GVYWFFTKIPRTRTDNMDGLYCF*KSSKLE Trigger: CTCAAGTTTACTGGACTTTCAAAAACAGTAAAGGCC...ATCCATGTTGTCAGTTCTTGTTCTAGGAATCTTTGTGAAAAACCAATACACTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000234172.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGCCATTTAACTCTTCTTCCTGGAATAGTAATGCTAAAGGCCAGAAGTACAGTCTCTGCATCTGTTTTTaGTTGCTGATTAATGATCAC | + |
|
Preference number: 2 (lower is better) Translates to: KPFNSSSWNSNAKGQKYSLCICF*LLINDH Trigger: GTGATCATTAATCAGCAAGCAAAAACAGATGCAGAG...ACTGTACTTCTGGCCTTTAGCATTACTATTCCAGGAAGAAGAGTTAAATGGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR GCA 90 bp | GCATGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTTTGAAGATAGATCTCATACTCTaGATCTGTTTTTGCTTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: AWLYQEVNPLTCLSLALKIDLIL*ICFCLL Trigger: CAGCAAGCAAAAACAGATGCAGAGTATGAGATCTAT...CTTCAAAGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCATGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTGTATTGGTTTTTCACAAAGATTCCTAGAACAAGAACTGACAACATGGATCATATCCAGCTGAAATaGAACAGCAAGGATACTATG | + |
|
Preference number: 2 (lower is better) Translates to: GVYWFFTKIPRTRTDNMDHIQLK*NSKDTM Trigger: CATAGTATCCTTGCTGTTCCATTTCAGCTGGATATG...ATCCATGTTGTCAGTTCTTGTTCTAGGAATCTTTGTGAAAAACCAATACACTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTAACTTCTAACAAAATTGCCCAAATGCCTCATAAGTCCACAGACATTCCAGGATGTGCACTGGTTTaGTGTTTTACAGTTAGATTT | + |
|
Preference number: 2 (lower is better) Translates to: LLTSNKIAQMPHKSTDIPGCALV*CFTVRF Trigger: AAATCTAACTGTAAAACACCAAACCAGTGCACATCC...TGGAATGTCTGTGGACTTATGAGGCATTTGGGCAATTTTGTTAGAAGTTAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTAACTTCTAACAAAATTGCCCAAATGCCTCATAAGTCCACAGACATTCCACAAGAACTGACAACATaGATAAAAATAAGGCCATGC | + |
|
Preference number: 2 (lower is better) Translates to: LLTSNKIAQMPHKSTDIPQELTT*IKIRPC Trigger: GCATGGCCTTATTTTTATCCATGTTGTCAGTTCTTG...TGGAATGTCTGTGGACTTATGAGGCATTTGGGCAATTTTGTTAGAAGTTAGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR TCA 90 bp | GACATAACCATTACAAGAAGCAATACTGAGATAAGATCACTGAAAACCCTGCAAAAACACCTGAATGTTTaGGTCTTTTCTAGGTCATCT | + |
|
Preference number: 2 (lower is better) Translates to: DITITRSNTEIRSLKTLQKHLNV*VFSRSS Trigger: AGATGACCTAGAAAAGACTCAAACATTCAGGTGTTT...TTGCAGGGTTTTCAGTGATCTTATCTCAGTATTGCTTCTTGTAATGGTTATGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTTTGAAGTTTTCCGATGAAGAACAATaGGCAGAGAAAACAAAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: WLYQEVNPLTCLSLALKFSDEEQ*AEKTKC Trigger: ACACTTTGTTTTCTCTGCTCATTGTTCTTCATCGGA...AAACTTCAAAGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCAACATTTATTGCTACAAAATTGCCCAAATaGCTCATAAGTCCACAGACA | + |
|
Preference number: 2 (lower is better) Translates to: GRKYALILNEKVSPTFIATKLPK*LISPQT Trigger: TGTCTGTGGACTTATGAGGCATTTGGGCAATTTTGT...AGCAATAAATGTTGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGAAATCTCATTTTCAGGGCAAGGAGAACAATCAAAACAGCAGGATGGTTTTTCTCTGCATCTGTTTTTaGTTGCTGATTAATGATCAC | + |
|
Preference number: 2 (lower is better) Translates to: LKSHFQGKENNQNSRMVFLCICF*LLINDH Trigger: GTGATCATTAATCAGCAAGCAAAAACAGATGCAGAG...AAAAACCATCCTGCTGTTTTGATTGTTCTCCTTGCCCTGAAAATGAGATTTCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGCAAACTGAAATAGGAAATTATGATAATTATGAGTGTAGTACCCAACAGGCACATATCCAGCTGAAATaGAACAGCAAGGATACTATG | + |
|
Preference number: 2 (lower is better) Translates to: RQTEIGNYDNYECSTQQAHIQLK*NSKDTM Trigger: CATAGTATCCTTGCTGTTCCATTTCAGCTGGATATG...TGCCTGTTGGGTACTACACTCATAATTATCATAATTTCCTATTTCAGTTTGCCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234172.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGAACCAGATTTTCTGTGTGCCTAAATATTTCCAATGTTTAAAGCTCACTTCTTTGCTGGATGTGCACTaGTTTGGTGTTTTACAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: VNQIFCVPKYFQCLKLTSLLDVH*FGVLQL Trigger: TAACTGTAAAACACCAAACCAGTGCACATCCAGCAA...AGAAGTGAGCTTTAAACATTGGAAATATTTAGGCACACAGAAAATCTGGTTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCATAATCCTATGTCATAAATTAGCATGGCTTTATCAAGAGGTAAATCCTCTGGATTTCTCTCTATGTTaGCATATTGACCATCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: TIILCHKLAWLYQEVNPLDFSLC*HIDHLD Trigger: GTCCAGATGGTCAATATGCCAACATAGAGAGAAATC...CAGAGGATTTACCTCTTGATAAAGCCATGCTAATTTATGACATAGGATTATGGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCAACATTTATTGCTATATGTCACAACCTTTaGGAAGCAGTGATTTCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: GRKYALILNEKVSPTFIAICHNL*EAVISL Trigger: GAGAGAAATCACTGCTTCCCAAAGGTTGTGACATAT...AGCAATAAATGTTGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCATAATCCTATGTCATAAATTAGCATGGCTTTATCAAGAGGTAAATCCTCTGAAACACCTGAATGTTTaGGTCTTTTCTAGGTCATCT | + |
|
Preference number: 2 (lower is better) Translates to: TIILCHKLAWLYQEVNPLKHLNV*VFSRSS Trigger: AGATGACCTAGAAAAGACTCAAACATTCAGGTGTTT...CAGAGGATTTACCTCTTGATAAAGCCATGCTAATTTATGACATAGGATTATGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTTTGAAGTTTTGCCCTCATTCTGAATaGAAAAGTATCTCCAACATT | + |
|
Preference number: 2 (lower is better) Translates to: WLYQEVNPLTCLSLALKFCPHSE*KSISNI Trigger: AATGTTGGAGATACTTTTTCATTCAGAATGAGGGCA...AAACTTCAAAGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR TCA 90 bp | AAATTAGCATGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTATCTCCATGATATTGTaGAATAGTGAGAGTCCCATA | + |
|
Preference number: 2 (lower is better) Translates to: KLAWLYQEVNPLTCLSLAISMIL*NSESPI Trigger: TATGGGACTCTCACTATTTCACAATATCATGGAGAT...AGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCATGCTAATTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTTTGAAGTTTCCACAGATAATTAGTTaGAAAAGGGAACAGATTGGA | + |
|
Preference number: 2 (lower is better) Translates to: WLYQEVNPLTCLSLALKFPQIIS*KREQIG Trigger: TCCAATCTGTTCCCTTTTTCAACTAATTATCTGTGG...AAACTTCAAAGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCAACATTTATTGCTCATTGCAAAATACAGTaGCAGAAGATACTGGTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: GRKYALILNEKVSPTFIAHCKIQ*QKILVY Trigger: ATACACCAGTATCTTCTGTCACTGTATTTTGCAATG...AGCAATAAATGTTGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000234172.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCATAATCCTATGTCATAAATTAGCATGGCTTTATCAAGAGGTAAATCCTCTGCTCTGCATCTGTTTTTaGTTGCTGATTAATGATCAC | + |
|
Preference number: 2 (lower is better) Translates to: TIILCHKLAWLYQEVNPLLCICF*LLINDH Trigger: GTGATCATTAATCAGCAAGCAAAAACAGATGCAGAG...CAGAGGATTTACCTCTTGATAAAGCCATGCTAATTTATGACATAGGATTATGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTTTGAAGTTTATAGATCTCATACTCTaGATCTGTTTTTGCTTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: WLYQEVNPLTCLSLALKFIDLIL*ICFCLL Trigger: CAGCAAGCAAAAACAGATGCAGAGTATGAGATCTAT...AAACTTCAAAGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTGTATTGGTTTTTCACAAAGATTCCTAGAACAAGAACTGACAACATGGATTTAAGCAGTATGATGTaGAAAACGTTTTTCTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: GVYWFFTKIPRTRTDNMDLSSMM*KTFFSQ Trigger: CTGAGAGAAAAACGTTTTCCACATCATACTGCTTAA...ATCCATGTTGTCAGTTCTTGTTCTAGGAATCTTTGTGAAAAACCAATACACTCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTTCTTATACTTTCTCCAAAGAATTGACCACATGGTCTTCCAAATATCTTTGCCAAGAACTGACAACATaGATAAAAATAAGGCCATGC | + |
|
Preference number: 2 (lower is better) Translates to: SSYTFSKELTTWSSKYLCQELTT*IKIRPC Trigger: GCATGGCCTTATTTTTATCCATGTTGTCAGTTCTTG...GCAAAGATATTTGGAAGACCATGTGGTCAATTCTTTGGAGAAAGTATAAGAACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR GCA 90 bp | AAATTAGCATGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTATAAAAATAAGGCCATaGAAGCCAATACAATCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: KLAWLYQEVNPLTCLSLAIKIRP*KPIQSL Trigger: TAGGGATTGTATTGGCTTGCATGGCCTTATTTTTAT...AGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCATGCTAATTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTTTGAAGTTTATAAAAATAAGGCCATaGAAGCCAATACAATCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: WLYQEVNPLTCLSLALKFIKIRP*KPIQSL Trigger: TAGGGATTGTATTGGCTTGCATGGCCTTATTTTTAT...AAACTTCAAAGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTTCTTATACTTTCTCCAAAGAATTGACCACATGGTCTTCCAAATATCTTTGCTTAAGCAGTATGATGTaGAAAACGTTTTTCTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: SSYTFSKELTTWSSKYLCLSSMM*KTFFSQ Trigger: CTGAGAGAAAAACGTTTTCCACATCATACTGCTTAA...GCAAAGATATTTGGAAGACCATGTGGTCAATTCTTTGGAGAAAGTATAAGAACT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCATAATCCTATGTCATAAATTAGCATGGCTTTATCAAGAGGTAAATCCTCTGTTTAACTCTTCTTCCTaGAATAGTAATGCTAAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: TIILCHKLAWLYQEVNPLFNSSS*NSNAKG Trigger: GCCTTTAGCATTACTATTCCAGGAAGAAGAGTTAAA...CAGAGGATTTACCTCTTGATAAAGCCATGCTAATTTATGACATAGGATTATGGT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR TCA 72 bp | ATGGCTTCAGGCAGGAATCTGTTTTTGGGGGCAATCTaGTGCAGATTAGGAAACTTGCTCTGGTCACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: MASGRNLFLGAI*CRLGNLLWSLR Trigger: CCTGAGTGACCAGAGCAAGTTTCCTAATCTGCATCAGATTGCCCCCAAAAACAGATTCCTGCCTGAAGCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR TCA 72 bp | GCCAAGGTATCCCAGCACAGAGTAGAAGGCTATAAGTaGGCCCTTGTTGCACATAATGATGATGTGGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: AKVSQHRVEGYK*ALVAHNDDVAM Trigger: CATGGCCACATCATCATTATGTGCAACAAGGGCTCACTTATAGCCTTCTACTCTGTGCTGGGATACCTTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACATATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACAATCTGCCCAATAGGGTaGGCTAGTGCCCAGAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: GHMSGLTTFAINSTSVHTICPIG*ASAQKS Trigger: TGATTTCTGGGCACTAGCCAACCCTATTGGGCAGAT...TGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATATGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR CCA 72 bp | AGGAAACTTGCTCTGGTCACTCAGGAGAGGGTAGAATaGTCCATAGGTAATCTGTCTTACCTGTGGGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: RKLALVTQERVE*SIGNLSYLWDE Trigger: TTCATCCCACAGGTAAGACAGATTACCTATGGACCATTCTACCCTCTCCTGAGTGACCAGAGCAAGTTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234172.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGCTCCACAGGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCAATCTGCCCAATAGGGTaGGCTAGTGCCCAGAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: EGSTGRKYALILNEKVSPICPIG*ASAQKS Trigger: TGATTTCTGGGCACTAGCCAACCCTATTGGGCAGAT...TGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCCTGTGGAGCCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACATATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACATATTCATGTATCCATTaGATGGACAGGGCAGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GHMSGLTTFAINSTSVHTYSCIH*MDRAEG Trigger: GCCTTCTGCCCTGTCCATCAAATGGATACATGAATA...TGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATATGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACATATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACACCACAGACATTCCACTaGTACAGGAGAGTTTCATTA | + |
|
Preference number: 3 (lower is better) Translates to: GHMSGLTTFAINSTSVHTPQTFH*YRRVSL Trigger: TAATGAAACTCTCCTGTACAAGTGGAATGTCTGTGG...TGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATATGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTTTCCAAGAATGCATGGATCTGCACGCACTCCTGCATTAGTTGGGTCACAAACCATTCCAATAAGTaGCTGGATGTGCACTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: MFSKNAWICTHSCISWVTNHSNK*LDVHWF Trigger: AAACCAGTGCACATCCAGCAACTTATTGGAATGGTT...TGTGACCCAACTAATGCAGGAGTGCGTGCAGATCCATGCATTCTTGGAAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACATATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACACTTCACTCCAAGCCCTaGTGGAAAATTCCAAATCAT | + |
|
Preference number: 3 (lower is better) Translates to: GHMSGLTTFAINSTSVHTLHSKP*WKIPNH Trigger: ATGATTTGGAATTTTCCACAAGGGCTTGGAGTGAAG...TGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATATGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACATATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACAACTTTCTCCAAAGAATaGACCACATGGTCTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GHMSGLTTFAINSTSVHTTFSKE*TTWSSK Trigger: TTTGGAAGACCATGTGGTCAATTCTTTGGAGAAAGT...TGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATATGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR TCA 72 bp | GAACTTGAGCTGAAGAATTGTTGCCACTTGTGCAGATaGTATCCACAGTGGACCTGTAAGTGCTATTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: ELELKNCCHLCR*YPQWTCKCYFT Trigger: TGTGAAATAGCACTTACAGGTCCACTGTGGATATCATCTGCACAAGTGGCAACAATTCTTCAGCTCAAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234172.2 |
||
| 3UTR CCA 72 bp | GACCATCTGGACACTTCACACATTGTGTTAGATCTGTaGCATTTGAAATCTCATTTTCAGGGCAAGGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: DHLDTSHIVLDL*HLKSHFQGKEN Trigger: GTTCTCCTTGCCCTGAAAATGAGATTTCAAATGCCACAGATCTAACACAATGTGTGAAGTGTCCAGATGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR CCA 72 bp | TCACAACCTTTGGGAAGCAGTGATTTCTCTCTATGTTaGCATATTGACCATCTGGACACTTCACACATTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SQPLGSSDFSLC*HIDHLDTSHIV Trigger: CACAATGTGTGAAGTGTCCAGATGGTCAATATGCCAACATAGAGAGAAATCACTGCTTCCCAAAGGTTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGCTCCACAGGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCAAACCATTCCAATAAGTaGCTGGATGTGCACTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: EGSTGRKYALILNEKVSPNHSNK*LDVHWF Trigger: AAACCAGTGCACATCCAGCAACTTATTGGAATGGTT...TGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCCTGTGGAGCCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCATTTAACTCTTCTTCCTGGAATAGTAATGCTAAAGGCCAGAAGTACAGTCCACAGACATTCCACTaGTACAGGAGAGTTTCATTA | + |
|
Preference number: 3 (lower is better) Translates to: KPFNSSSWNSNAKGQKYSPQTFH*YRRVSL Trigger: TAATGAAACTCTCCTGTACAAGTGGAATGTCTGTGG...ACTGTACTTCTGGCCTTTAGCATTACTATTCCAGGAAGAAGAGTTAAATGGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | TATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACATAGTTGGTAAATCCTCTGACTaGTTTATCACTAGCTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: YVRPDHLCHQFHKCTYIVGKSSD*FITSFE Trigger: TTCAAAGCTAGTGATAAACAAGTCAGAGGATTTACC...AACTATGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTAACTTCTAACAAAATTGCCCAAATGCCTCATAAGTCCACAGACATTCCAGATATGTCACAACCTTaGGGAAGCAGTGATTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLTSNKIAQMPHKSTDIPDMSQP*GSSDFS Trigger: AGAGAAATCACTGCTTCCCAAAGGTTGTGACATATC...TGGAATGTCTGTGGACTTATGAGGCATTTGGGCAATTTTGTTAGAAGTTAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR GCA 72 bp | GAACAAGAACTGACAACATGGATAAAAATAAGGCCATaGAAGCCAATACAATCCCTAATGGGTCTGCATAAG | + |
|
Preference number: 3 (lower is better) Translates to: EQELTTWIKIRP*KPIQSLMGLHK Trigger: CTTATGCAGACCCATTAGGGATTGTATTGGCTTGCATGGCCTTATTTTTATCCATGTTGTCAGTTCTTGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGAAATCTCATTTTCAGGGCAAGGAGAACAATCAAAACAGCAGGATGGTTTTTCCACAGACATTCCACTaGTACAGGAGAGTTTCATTA | + |
|
Preference number: 3 (lower is better) Translates to: LKSHFQGKENNQNSRMVFPQTFH*YRRVSL Trigger: TAATGAAACTCTCCTGTACAAGTGGAATGTCTGTGG...AAAAACCATCCTGCTGTTTTGATTGTTCTCCTTGCCCTGAAAATGAGATTTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | GACATAACCATTACAAGAAGCAATACTGAGATAAGATCACTGAAAACCCTGCAACCACAGACATTCCACTaGTACAGGAGAGTTTCATTA | + |
|
Preference number: 3 (lower is better) Translates to: DITITRSNTEIRSLKTLQPQTFH*YRRVSL Trigger: TAATGAAACTCTCCTGTACAAGTGGAATGTCTGTGG...TTGCAGGGTTTTCAGTGATCTTATCTCAGTATTGCTTCTTGTAATGGTTATGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTAACTTCTAACAAAATTGCCCAAATGCCTCATAAGTCCACAGACATTCCAACTTTCTCCAAAGAATaGACCACATGGTCTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LLTSNKIAQMPHKSTDIPTFSKE*TTWSSK Trigger: TTTGGAAGACCATGTGGTCAATTCTTTGGAGAAAGT...TGGAATGTCTGTGGACTTATGAGGCATTTGGGCAATTTTGTTAGAAGTTAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTTTGAAGTTTTATTCATGTATCCATTaGATGGACAGGGCAGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: WLYQEVNPLTCLSLALKFYSCIH*MDRAEG Trigger: GCCTTCTGCCCTGTCCATCAAATGGATACATGAATA...AAACTTCAAAGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGTGTATTGGTTTTTCACAAAGATTCCTAGAACAAGAACTGACAACATGGATGATATGTCACAACCTTaGGGAAGCAGTGATTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GVYWFFTKIPRTRTDNMDDMSQP*GSSDFS Trigger: AGAGAAATCACTGCTTCCCAAAGGTTGTGACATATC...ATCCATGTTGTCAGTTCTTGTTCTAGGAATCTTTGTGAAAAACCAATACACTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCATTTAACTCTTCTTCCTGGAATAGTAATGCTAAAGGCCAGAAGTACAGTCACAATGGGAGTGTATaGGTTTTTCACAAAGATTCC | + |
|
Preference number: 3 (lower is better) Translates to: KPFNSSSWNSNAKGQKYSHNGSV*VFHKDS Trigger: GGAATCTTTGTGAAAAACCAATACACTCCCATTGTG...ACTGTACTTCTGGCCTTTAGCATTACTATTCCAGGAAGAAGAGTTAAATGGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR TCA 72 bp | GGAGATAGTCCCAACCAGAATCCACAGATAATTAGTTaGAAAAGGGAACAGATTGGAATGATGACTTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GDSPNQNPQIIS*KREQIGMMTLC Trigger: ACACAAAGTCATCATTCCAATCTGTTCCCTTTTTCAACTAATTATCTGTGGATTCTGGTTGGGACTATCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR GCA 72 bp | TTAATGATCACTACATCTCCAATAGGATTCAAAAACTaGATGTTTTCCAAGAATGCATGGATCTGCACGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LMITTSPIGFKN*MFSKNAWICTH Trigger: GTGCGTGCAGATCCATGCATTCTTGGAAAACATGCAGTTTTTGAATCCTATTGGAGATGTAGTGATCATTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR CCA 72 bp | AAATCGTCCTATTTTCACCTTCACTCCAAGCCCTTGTaGAAAATTCCAAATCATATAGATCTCATACTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: KSSYFHLHSKPL*KIPNHIDLILC Trigger: GCAGAGTATGAGATCTATATGATTTGGAATTTTCCACAAGGGCTTGGAGTGAAGGTGAAAATAGGACGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR CCA 72 bp | AGAGTGCGGTTATTAGCTTTCACAATGGGAGTGTATTaGTTTTTCACAAAGATTCCTAGAACAAGAACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: RVRLLAFTMGVY*FFTKIPRTRTD Trigger: GTCAGTTCTTGTTCTAGGAATCTTTGTGAAAAACCAATACACTCCCATTGTGAAAGCTAATAACCGCACTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCATTTAACTCTTCTTCCTGGAATAGTAATGCTAAAGGCCAGAAGTACAGTGGTAAATCCTCTGACTaGTTTATCACTAGCTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: KPFNSSSWNSNAKGQKYSGKSSD*FITSFE Trigger: TTCAAAGCTAGTGATAAACAAGTCAGAGGATTTACC...ACTGTACTTCTGGCCTTTAGCATTACTATTCCAGGAAGAAGAGTTAAATGGCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCTTATACTTTCTCCAAAGAATTGACCACATGGTCTTCCAAATATCTTTGCAACCATTCCAATAAGTaGCTGGATGTGCACTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SSYTFSKELTTWSSKYLCNHSNK*LDVHWF Trigger: AAACCAGTGCACATCCAGCAACTTATTGGAATGGTT...GCAAAGATATTTGGAAGACCATGTGGTCAATTCTTTGGAGAAAGTATAAGAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCATTTAACTCTTCTTCCTGGAATAGTAATGCTAAAGGCCAGAAGTACAGTTGCATCTGTTTTTGCTaGCTGATTAATGATCACTAC | + |
|
Preference number: 3 (lower is better) Translates to: KPFNSSSWNSNAKGQKYSCICFC*LINDHY Trigger: GTAGTGATCATTAATCAGCAAGCAAAAACAGATGCA...ACTGTACTTCTGGCCTTTAGCATTACTATTCCAGGAAGAAGAGTTAAATGGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCATAATCCTATGTCATAAATTAGCATGGCTTTATCAAGAGGTAAATCCTCTGCTTCACTCCAAGCCCTaGTGGAAAATTCCAAATCAT | + |
|
Preference number: 3 (lower is better) Translates to: TIILCHKLAWLYQEVNPLLHSKP*WKIPNH Trigger: ATGATTTGGAATTTTCCACAAGGGCTTGGAGTGAAG...CAGAGGATTTACCTCTTGATAAAGCCATGCTAATTTATGACATAGGATTATGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGAGTGTATTGGTTTTTCACAAAGATTCCTAGAACAAGAACTGACAACATGTTAGATCTGTGGCATTaGAAATCTCATTTTCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: MGVYWFFTKIPRTRTDNMLDLWH*KSHFQG Trigger: GCCCTGAAAATGAGATTTCAAATGCCACAGATCTAA...CATGTTGTCAGTTCTTGTTCTAGGAATCTTTGTGAAAAACCAATACACTCCCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCTTATACTTTCTCCAAAGAATTGACCACATGGTCTTCCAAATATCTTTGCGATATGTCACAACCTTaGGGAAGCAGTGATTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSYTFSKELTTWSSKYLCDMSQP*GSSDFS Trigger: AGAGAAATCACTGCTTCCCAAAGGTTGTGACATATC...GCAAAGATATTTGGAAGACCATGTGGTCAATTCTTTGGAGAAAGTATAAGAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | GACATAACCATTACAAGAAGCAATACTGAGATAAGATCACTGAAAACCCTGCAACATTGTTCAATACTTTaGCTTCCAACTTCTAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: DITITRSNTEIRSLKTLQHCSIL*LPTSNH Trigger: GTGGTTAGAAGTTGGAAGCAAAAGTATTGAACAATG...TTGCAGGGTTTTCAGTGATCTTATCTCAGTATTGCTTCTTGTAATGGTTATGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGTGTATTGGTTTTTCACAAAGATTCCTAGAACAAGAACTGACAACATGGATTGCATCTGTTTTTGCTaGCTGATTAATGATCACTAC | + |
|
Preference number: 3 (lower is better) Translates to: GVYWFFTKIPRTRTDNMDCICFC*LINDHY Trigger: GTAGTGATCATTAATCAGCAAGCAAAAACAGATGCA...ATCCATGTTGTCAGTTCTTGTTCTAGGAATCTTTGTGAAAAACCAATACACTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR TCA 72 bp | CTGCTATTCTTAGTTCTTATACTTTCTCCAAAGAATTaGCCACATGGTCTTCCAAATATCTTTGCATTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LLFLVLILSPKN*PHGLPNIFAFH Trigger: ATGGAATGCAAAGATATTTGGAAGACCATGTGGTCAATTCTTTGGAGAAAGTATAAGAACTAAGAATAGCAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| CDS-3UTR CCA 90 bp | ATGTATCCATTTGATGGACAGGGCAGAAGGCTCCACAGGCAGAAAATATGCCCTCCATGGCCTTCCCTTTaGTGCTGTGGTGGACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MYPFDGQGRRLHRQKICPPWPSL*CCGGQG Trigger: TCCCTGTCCACCACAGCACCAAAGGGAAGGCCATGG...AGGGCATATTTTCTGCCTGTGGAGCCTTCTGCCCTGTCCATCAAATGGATACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR GCA 90 bp | GAAGGCTCCACAGGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCATGGCCTTCCCTTTGGTaGTGTGGTGGACAGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EGSTGRKYALILNEKVSPWPSLW*CGGQGG Trigger: TCCTCCCTGTCCACCACAGCACCAAAGGGAAGGCCA...TGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCCTGTGGAGCCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR CCA 90 bp | TATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACATAGTTCCTTTGGTGCTGTGGTaGACAGGGAGGAAGGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: YVRPDHLCHQFHKCTYIVPLVLW*TGRKVT Trigger: GGTCACCTTCCTCCCTGTCCACCACAGCACCAAAGG...AACTATGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR GCA 90 bp | GGACATATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACACCAAAAGTGATCTGCTaGAGGAGACATCTGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GHMSGLTTFAINSTSVHTPKVIC*RRHLAV Trigger: CACAGCCAGATGTCTCCTGCAGCAGATCACTTTTGG...TGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATATGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR TCA 90 bp | GGACATATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACAGCACATGTTCTCAGCTaGATTGCACAGAAGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GHMSGLTTFAINSTSVHTAHVLS*IAQKKR Trigger: CCTCTTCTTCTGTGCAATTCAGCTGAGAACATGTGC...TGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATATGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| CDS-3UTR GCA 90 bp | TATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACATAGTTGAGCACAGCTCACACTaGATACAGAAGGTGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: YVRPDHLCHQFHKCTYIVEHSSH*IQKVVS Trigger: AGATACCACCTTCTGTATGCAGTGTGAGCTGTGCTC...AACTATGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR CCA 90 bp | GACATAACCATTACAAGAAGCAATACTGAGATAAGATCACTGAAAACCCTGCAATTCCCTTTGGTGCTGTaGTGGACAGGGAGGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DITITRSNTEIRSLKTLQFPLVL*WTGRKV Trigger: CACCTTCCTCCCTGTCCACCACAGCACCAAAGGGAA...TTGCAGGGTTTTCAGTGATCTTATCTCAGTATTGCTTCTTGTAATGGTTATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR TCA 90 bp | ATGTATCCATTTGATGGACAGGGCAGAAGGCTCCACAGGCAGAAAATATGCCCTCATTGCAAAATACAGTaGCAGAAGATACTGGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: MYPFDGQGRRLHRQKICPHCKIQ*QKILVY Trigger: ATACACCAGTATCTTCTGTCACTGTATTTTGCAATG...AGGGCATATTTTCTGCCTGTGGAGCCTTCTGCCCTGTCCATCAAATGGATACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 |
||
| CDS-3UTR TCA 90 bp | TATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACATAGTTGGGATGAACTTGAGCTaGAGAATTGTTGCCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YVRPDHLCHQFHKCTYIVGMNLS*RIVATC Trigger: ACAAGTGGCAACAATTCTTCAGCTCAAGTTCATCCC...AACTATGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 |
||
| CDS-3UTR TCA 90 bp | TATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACATAGTTCTACCCATATCCAGCTaGAATGGAACAGCAAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: YVRPDHLCHQFHKCTYIVLPISS*NGTARI Trigger: TATCCTTGCTGTTCCATTTCAGCTGGATATGGGTAG...AACTATGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 |
||
| CDS-3UTR TCA 90 bp | GGACATATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACATCCGATGAAGAACAATaGGCAGAGAAAACAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GHMSGLTTFAINSTSVHTSDEEQ*AEKTKC Trigger: ACACTTTGTTTTCTCTGCTCATTGTTCTTCATCGGA...TGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATATGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR GCA 90 bp | TATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACATAGTTTGTTCTCAGCTGAATTaGACAGAAGAAGAGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YVRPDHLCHQFHKCTYIVCSQLN*TEEEGA Trigger: AGCTCCCTCTTCTTCTGTGCAATTCAGCTGAGAACA...AACTATGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| CDS-3UTR GCA 90 bp | TGTCACAACCTTTGGGAAGCAGTGATTTCTCTCTATGTTGGCATATTGACCATCTGTTCTCAGCTGAATTaGACAGAAGAAGAGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CHNLWEAVISLYVGILTICSQLN*TEEEGA Trigger: AGCTCCCTCTTCTTCTGTGCAATTCAGCTGAGAACA...GATGGTCAATATGCCAACATAGAGAGAAATCACTGCTTCCCAAAGGTTGTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| CDS-3UTR GCA 90 bp | ATGTATCCATTTGATGGACAGGGCAGAAGGCTCCACAGGCAGAAAATATGCCCTATAGATCTCATACTCTaGATCTGTTTTTGCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MYPFDGQGRRLHRQKICPIDLIL*ICFCLL Trigger: CAGCAAGCAAAAACAGATGCAGAGTATGAGATCTAT...AGGGCATATTTTCTGCCTGTGGAGCCTTCTGCCCTGTCCATCAAATGGATACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR TCA 90 bp | GCATGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTTTGAAGGCACATGTTCTCAGCTaGATTGCACAGAAGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AWLYQEVNPLTCLSLALKAHVLS*IAQKKR Trigger: CCTCTTCTTCTGTGCAATTCAGCTGAGAACATGTGC...CTTCAAAGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| CDS-3UTR TCA 90 bp | TATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACATAGTTTCTATGTTGGCATATTaGCCATCTGGACACTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: YVRPDHLCHQFHKCTYIVSMLAY*PSGHFT Trigger: TGTGAAGTGTCCAGATGGTCAATATGCCAACATAGA...AACTATGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR CCA 90 bp | GGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCAACATTTATTGCTCACTCGAGGCCAAGATaGAGAATACCTCCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRKYALILNEKVSPTFIAHSRPR*RIPPQP Trigger: TGGCTGTGGAGGTATTCTCCATCTTGGCCTCGAGTG...AGCAATAAATGTTGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| 3UTR CAA 72 bp | TTGCCCAAATGCCTCATAAGTCCACAGACATTCCACTaGTACAGGAGAGTTTCATTATTACCCAGGAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPKCLISPQTFH*YRRVSLLPRSK Trigger: TTTACTCCTGGGTAATAATGAAACTCTCCTGTACAAGTGGAATGTCTGTGGACTTATGAGGCATTTGGGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR CAA 72 bp | ATGTCAAAACTGTGCCGTGGTAACCATTCCAATAAGTaGCTGGATGTGCACTGGTTTGGTGTTTTACAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: MSKLCRGNHSNK*LDVHWFGVLQL Trigger: TAACTGTAAAACACCAAACCAGTGCACATCCAGCAACTTATTGGAATGGTTACCACGGCACAGTTTTGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| 3UTR CAA 72 bp | CTAATGGGTCTGCATAAGCCAGATATGTCACAACCTTaGGGAAGCAGTGATTTCTCTCTATGTTGGCATATT | + |
|
Preference number: 4 (lower is better) Translates to: LMGLHKPDMSQP*GSSDFSLCWHI Trigger: AATATGCCAACATAGAGAGAAATCACTGCTTCCCAAAGGTTGTGACATATCTGGCTTATGCAGACCCATTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGTGTATTGGTTTTTCACAAAGATTCCTAGAACAAGAACTGACAACATGGCACATGTTCTCAGCTaGATTGCACAGAAGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MGVYWFFTKIPRTRTDNMAHVLS*IAQKKR Trigger: CCTCTTCTTCTGTGCAATTCAGCTGAGAACATGTGC...CATGTTGTCAGTTCTTGTTCTAGGAATCTTTGTGAAAAACCAATACACTCCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| CDS-3UTR TCA 90 bp | TTGAAATCTCATTTTCAGGGCAAGGAGAACAATCAAAACAGCAGGATGGTTTTTGCACATGTTCTCAGCTaGATTGCACAGAAGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKSHFQGKENNQNSRMVFAHVLS*IAQKKR Trigger: CCTCTTCTTCTGTGCAATTCAGCTGAGAACATGTGC...AAAAACCATCCTGCTGTTTTGATTGTTCTCCTTGCCCTGAAAATGAGATTTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTAACTTCTAACAAAATTGCCCAAATGCCTCATAAGTCCACAGACATTCCACTACCCATATCCAGCTaGAATGGAACAGCAAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LLTSNKIAQMPHKSTDIPLPISS*NGTARI Trigger: TATCCTTGCTGTTCCATTTCAGCTGGATATGGGTAG...TGGAATGTCTGTGGACTTATGAGGCATTTGGGCAATTTTGTTAGAAGTTAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 |
||
| CDS-3UTR GCA 90 bp | AAATTAGCATGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTCAGTGGACCTGTAAGTaGTATTTCACATGCACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLAWLYQEVNPLTCLSLAQWTCK*YFTCTG Trigger: CCCGGTGCATGTGAAATAGCACTTACAGGTCCACTG...AGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCATGCTAATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGCCATTTAACTCTTCTTCCTGGAATAGTAATGCTAAAGGCCAGAAGTACATTCCCAGAGACACATTaGGTAAAAGGTAGGGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RSHLTLLPGIVMLKARSTFPETH*VKGRGY Trigger: GTAACCCCTACCTTTTACCCAATGTGTCTCTGGGAA...TGTACTTCTGGCCTTTAGCATTACTATTCCAGGAAGAAGAGTTAAATGGCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234082.2 |
||
| CDS-3UTR CCA 90 bp | TATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACATAGTTCATATCCAGCTGAAATaGAACAGCAAGGATACTATG | + |
|
Preference number: 4 (lower is better) Translates to: YVRPDHLCHQFHKCTYIVHIQLK*NSKDTM Trigger: CATAGTATCCTTGCTGTTCCATTTCAGCTGGATATG...AACTATGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGCTCCACAGGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCACTCTGCATCTGTTTTTaGTTGCTGATTAATGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: EGSTGRKYALILNEKVSPLCICF*LLINDH Trigger: GTGATCATTAATCAGCAAGCAAAAACAGATGCAGAG...TGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCCTGTGGAGCCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR CCA 90 bp | GACATAACCATTACAAGAAGCAATACTGAGATAAGATCACTGAAAACCCTGCAATTCCCAGAGACACATTaGGTAAAAGGTAGGGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: DITITRSNTEIRSLKTLQFPETH*VKGRGY Trigger: GTAACCCCTACCTTTTACCCAATGTGTCTCTGGGAA...TTGCAGGGTTTTCAGTGATCTTATCTCAGTATTGCTTCTTGTAATGGTTATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 |
||
| 3UTR CAA 72 bp | CTGGACACTTCACACATTGTGTTAGATCTGTGGCATTaGAAATCTCATTTTCAGGGCAAGGAGAACAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LDTSHIVLDLWH*KSHFQGKENNQ Trigger: TTGATTGTTCTCCTTGCCCTGAAAATGAGATTTCAAATGCCACAGATCTAACACAATGTGTGAAGTGTCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCAACATTTATTGCTGGGATGAACTTGAGCTaGAGAATTGTTGCCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRKYALILNEKVSPTFIAGMNLS*RIVATC Trigger: ACAAGTGGCAACAATTCTTCAGCTCAAGTTCATCCC...AGCAATAAATGTTGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 |
||
| CDS-3UTR GCA 90 bp | AGTTCTTATACTTTCTCCAAAGAATTGACCACATGGTCTTCCAAATATCTTTGCTGTTCTCAGCTGAATTaGACAGAAGAAGAGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSYTFSKELTTWSSKYLCCSQLN*TEEEGA Trigger: AGCTCCCTCTTCTTCTGTGCAATTCAGCTGAGAACA...GCAAAGATATTTGGAAGACCATGTGGTCAATTCTTTGGAGAAAGTATAAGAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTTTGAAGTTTTGTTCTCAGCTGAATTaGACAGAAGAAGAGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WLYQEVNPLTCLSLALKFCSQLN*TEEEGA Trigger: AGCTCCCTCTTCTTCTGTGCAATTCAGCTGAGAACA...AAACTTCAAAGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| CDS-3UTR GCA 90 bp | ACCATAATCCTATGTCATAAATTAGCATGGCTTTATCAAGAGGTAAATCCTCTGGCCATGTCAAAACTGTaGCGTGGTAACCATTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TIILCHKLAWLYQEVNPLAMSKL*RGNHSN Trigger: ATTGGAATGGTTACCACGGCACAGTTTTGACATGGC...CAGAGGATTTACCTCTTGATAAAGCCATGCTAATTTATGACATAGGATTATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR GCA 90 bp | GAAGGCTCCACAGGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCAATAAAAATAAGGCCATaGAAGCCAATACAATCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: EGSTGRKYALILNEKVSPIKIRP*KPIQSL Trigger: TAGGGATTGTATTGGCTTGCATGGCCTTATTTTTAT...TGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCCTGTGGAGCCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR CCA 90 bp | GGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCAACATTTATTGCTCACTCCTGCATTAGTTaGGTCACATTTTCCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRKYALILNEKVSPTFIAHSCIS*VTFSSC Trigger: GCAACTGGAAAATGTGACCCAACTAATGCAGGAGTG...AGCAATAAATGTTGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR CCA 90 bp | GAAGGCTCCACAGGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCATTTAACTCTTCTTCCTaGAATAGTAATGCTAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EGSTGRKYALILNEKVSPFNSSS*NSNAKG Trigger: GCCTTTAGCATTACTATTCCAGGAAGAAGAGTTAAA...TGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCCTGTGGAGCCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
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| CDS-3UTR CCA 90 bp | GACATAACCATTACAAGAAGCAATACTGAGATAAGATCACTGAAAACCCTGCAAATATGTCACAACCTTTaGGAAGCAGTGATTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DITITRSNTEIRSLKTLQICHNL*EAVISL Trigger: GAGAGAAATCACTGCTTCCCAAAGGTTGTGACATAT...TTGCAGGGTTTTCAGTGATCTTATCTCAGTATTGCTTCTTGTAATGGTTATGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR TCA 90 bp | ACCATAATCCTATGTCATAAATTAGCATGGCTTTATCAAGAGGTAAATCCTCTGAAAACACAAGCATGCTaGATGTTAGGAACTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TIILCHKLAWLYQEVNPLKTQAC*MLGTWL Trigger: AAGCCAAGTTCCTAACATTCAGCATGCTTGTGTTTT...CAGAGGATTTACCTCTTGATAAAGCCATGCTAATTTATGACATAGGATTATGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR CCA 90 bp | ACCATAATCCTATGTCATAAATTAGCATGGCTTTATCAAGAGGTAAATCCTCTGCATATCCAGCTGAAATaGAACAGCAAGGATACTATG | + |
|
Preference number: 4 (lower is better) Translates to: TIILCHKLAWLYQEVNPLHIQLK*NSKDTM Trigger: CATAGTATCCTTGCTGTTCCATTTCAGCTGGATATG...CAGAGGATTTACCTCTTGATAAAGCCATGCTAATTTATGACATAGGATTATGGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 |
||
| CDS-3UTR CCA 90 bp | AAATTAGCATGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTTTGCTGGATGTGCACTaGTTTGGTGTTTTACAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: KLAWLYQEVNPLTCLSLALLDVH*FGVLQL Trigger: TAACTGTAAAACACCAAACCAGTGCACATCCAGCAA...AGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCATGCTAATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR CCA 90 bp | GGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCAACATTTATTGCTGATTTCTCTCTATGTTaGCATATTGACCATCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRKYALILNEKVSPTFIADFSLC*HIDHLD Trigger: GTCCAGATGGTCAATATGCCAACATAGAGAGAAATC...AGCAATAAATGTTGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR CCA 90 bp | CTTCTAACTTCTAACAAAATTGCCCAAATGCCTCATAAGTCCACAGACATTCCAACAATGGGAGTGTATTaGTTTTTCACAAAGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLTSNKIAQMPHKSTDIPTMGVY*FFTKIP Trigger: AGGAATCTTTGTGAAAAACCAATACACTCCCATTGT...TGGAATGTCTGTGGACTTATGAGGCATTTGGGCAATTTTGTTAGAAGTTAGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR CCA 90 bp | CTTCTAACTTCTAACAAAATTGCCCAAATGCCTCATAAGTCCACAGACATTCCAAAAAAGGGAACAGATTaGAATGATGACTTTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLTSNKIAQMPHKSTDIPKKGTD*NDDFVC Trigger: ACACACAAAGTCATCATTCCAATCTGTTCCCTTTTT...TGGAATGTCTGTGGACTTATGAGGCATTTGGGCAATTTTGTTAGAAGTTAGAAG 37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR TCA 90 bp | ACCATAATCCTATGTCATAAATTAGCATGGCTTTATCAAGAGGTAAATCCTCTGATCTCCATGATATTGTaGAATAGTGAGAGTCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: TIILCHKLAWLYQEVNPLISMIL*NSESPI Trigger: TATGGGACTCTCACTATTTCACAATATCATGGAGAT...CAGAGGATTTACCTCTTGATAAAGCCATGCTAATTTATGACATAGGATTATGGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR TCA 90 bp | GGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCAACATTTATTGCTCCACAGATAATTAGTTaGAAAAGGGAACAGATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRKYALILNEKVSPTFIAPQIIS*KREQIG Trigger: TCCAATCTGTTCCCTTTTTCAACTAATTATCTGTGG...AGCAATAAATGTTGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR CCA 90 bp | GGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCAACATTTATTGCTGGATGTGCACTGGTTTaGTGTTTTACAGTTAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: GRKYALILNEKVSPTFIAGCALV*CFTVRF Trigger: AAATCTAACTGTAAAACACCAAACCAGTGCACATCC...AGCAATAAATGTTGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| 3UTR CAA 72 bp | CCTGCTATTCTTAGTTCTTATACTTTCTCCAAAGAATaGACCACATGGTCTTCCAAATATCTTTGCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PAILSSYTFSKE*TTWSSKYLCIP Trigger: TGGAATGCAAAGATATTTGGAAGACCATGTGGTCAATTCTTTGGAGAAAGTATAAGAACTAAGAATAGCAGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| CDS-3UTR CAA 90 bp | TCCAAGAATGCATGGATCTGCACGCACTCCTGCATTAGTTGGGTCACATTTTCCTGGTGCAGGGTCCACTaGTGTGTAAAGGAGAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SKNAWICTHSCISWVTFSWCRVH*CVKEKS Trigger: GCTTTTCTCCTTTACACACAAGTGGACCCTGCACCA...GGAAAATGTGACCCAACTAATGCAGGAGTGCGTGCAGATCCATGCATTCTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| CDS-3UTR CAA 90 bp | ATGTATCCATTTGATGGACAGGGCAGAAGGCTCCACAGGCAGAAAATATGCCCTTGGTGCAGGGTCCACTaGTGTGTAAAGGAGAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: MYPFDGQGRRLHRQKICPWCRVH*CVKEKS Trigger: GCTTTTCTCCTTTACACACAAGTGGACCCTGCACCA...AGGGCATATTTTCTGCCTGTGGAGCCTTCTGCCCTGTCCATCAAATGGATACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| CDS-3UTR CAA 90 bp | TATGTCAGGCCTGACCACCTTTGCCATCAATTCCACAAGTGTACATACATAGTTTGGTGCAGGGTCCACTaGTGTGTAAAGGAGAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: YVRPDHLCHQFHKCTYIVWCRVH*CVKEKS Trigger: GCTTTTCTCCTTTACACACAAGTGGACCCTGCACCA...AACTATGTATGTACACTTGTGGAATTGATGGCAAAGGTGGTCAGGCCTGACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| CDS-3UTR CAA 90 bp | ATGTATCCATTTGATGGACAGGGCAGAAGGCTCCACAGGCAGAAAATATGCCCTGATATGTCACAACCTTaGGGAAGCAGTGATTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: MYPFDGQGRRLHRQKICPDMSQP*GSSDFS Trigger: AGAGAAATCACTGCTTCCCAAAGGTTGTGACATATC...AGGGCATATTTTCTGCCTGTGGAGCCTTCTGCCCTGTCCATCAAATGGATACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR CAA 90 bp | GGACACTTCACACATTGTGTTAGATCTGTGGCATTTGAAATCTCATTTTCAGGGTGGTGCAGGGTCCACTaGTGTGTAAAGGAGAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GHFTHCVRSVAFEISFSGWCRVH*CVKEKS Trigger: GCTTTTCTCCTTTACACACAAGTGGACCCTGCACCA...CCCTGAAAATGAGATTTCAAATGCCACAGATCTAACACAATGTGTGAAGTGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| CDS-3UTR CAA 90 bp | ATGTATCCATTTGATGGACAGGGCAGAAGGCTCCACAGGCAGAAAATATGCCCTCACAATGGGAGTGTATaGGTTTTTCACAAAGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: MYPFDGQGRRLHRQKICPHNGSV*VFHKDS Trigger: GGAATCTTTGTGAAAAACCAATACACTCCCATTGTG...AGGGCATATTTTCTGCCTGTGGAGCCTTCTGCCCTGTCCATCAAATGGATACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR CAA 90 bp | AGGGCAGAAGGCTCCACAGGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATGCATCTGTTTTTGCTaGCTGATTAATGATCACTAC | + |
|
Preference number: 5 (lower is better) Translates to: RAEGSTGRKYALILNEKVCICFC*LINDHY Trigger: GTAGTGATCATTAATCAGCAAGCAAAAACAGATGCA...TACTTTTTCATTCAGAATGAGGGCATATTTTCTGCCTGTGGAGCCTTCTGCCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
||
| CDS-3UTR CAA 90 bp | GGCAGAAAATATGCCCTCATTCTGAATGAAAAAGTATCTCCAACATTTATTGCTATGTTCTCAGCTGAATaGCACAGAAGAAGAGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRKYALILNEKVSPTFIAMFSAE*HRRRGS Trigger: GCTCCCTCTTCTTCTGTGCAATTCAGCTGAGAACAT...AGCAATAAATGTTGGAGATACTTTTTCATTCAGAATGAGGGCATATTTTCTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
||
| CDS-3UTR CAA 90 bp | AAATTAGCATGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTATGTTCTCAGCTGAATaGCACAGAAGAAGAGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: KLAWLYQEVNPLTCLSLAMFSAE*HRRRGS Trigger: GCTCCCTCTTCTTCTGTGCAATTCAGCTGAGAACAT...AGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCATGCTAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| CDS-3UTR CAA 90 bp | TATATCCTGAGGCCCATTGGATCATGTCCTCATATAAGTACAATTTTTGATCATATGTTCTCAGCTGAATaGCACAGAAGAAGAGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: YILRPIGSCPHISTIFDHMFSAE*HRRRGS Trigger: GCTCCCTCTTCTTCTGTGCAATTCAGCTGAGAACAT...ATGATCAAAAATTGTACTTATATGAGGACATGATCCAATGGGCCTCAGGATATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| CDS-3UTR CAA 90 bp | TGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTTTGAAGTTTATGTTCTCAGCTGAATaGCACAGAAGAAGAGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: WLYQEVNPLTCLSLALKFMFSAE*HRRRGS Trigger: GCTCCCTCTTCTTCTGTGCAATTCAGCTGAGAACAT...AAACTTCAAAGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| CDS-3UTR CAA 90 bp | GCATGGCTTTATCAAGAGGTAAATCCTCTGACTTGTTTATCACTAGCTTTGAAGAACCATTCCAATAAGTaGCTGGATGTGCACTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: AWLYQEVNPLTCLSLALKNHSNK*LDVHWF Trigger: AAACCAGTGCACATCCAGCAACTTATTGGAATGGTT...CTTCAAAGCTAGTGATAAACAAGTCAGAGGATTTACCTCTTGATAAAGCCATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
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| CDS-3UTR CAA 90 bp | CTTCTAACTTCTAACAAAATTGCCCAAATGCCTCATAAGTCCACAGACATTCCATTAGATCTGTGGCATTaGAAATCTCATTTTCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: LLTSNKIAQMPHKSTDIPLDLWH*KSHFQG Trigger: GCCCTGAAAATGAGATTTCAAATGCCACAGATCTAA...TGGAATGTCTGTGGACTTATGAGGCATTTGGGCAATTTTGTTAGAAGTTAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
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| CDS-3UTR CAA 90 bp | AGTTCTTATACTTTCTCCAAAGAATTGACCACATGGTCTTCCAAATATCTTTGCCCATCGCAGTTTTCATaGAGTTTTACTCTCCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: SSYTFSKELTTWSSKYLCPSQFS*SFTLQK Trigger: CTTCTGGAGAGTAAAACTCAATGAAAACTGCGATGG...GCAAAGATATTTGGAAGACCATGTGGTCAATTCTTTGGAGAAAGTATAAGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 ENSMUST00000234172.2 ENSMUST00000234385.2 |
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| CDS-3UTR CAA 90 bp | AGTTCTTATACTTTCTCCAAAGAATTGACCACATGGTCTTCCAAATATCTTTGCCTTCACTCCAAGCCCTaGTGGAAAATTCCAAATCAT | + |
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Preference number: 5 (lower is better) Translates to: SSYTFSKELTTWSSKYLCLHSKP*WKIPNH Trigger: ATGATTTGGAATTTTCCACAAGGGCTTGGAGTGAAG...GCAAAGATATTTGGAAGACCATGTGGTCAATTCTTTGGAGAAAGTATAAGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168440.3 |
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| CDS CCA 72 bp | ATCTCCTCCATTGCAAAATACAGTGACAGAAGATACTaGTGTATTTTGGAAGGCAAACACGATTTAAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: ISSIAKYSDRRY*CILEGKHDLKR Trigger: TCTCTTTAAATCGTGTTTGCCTTCCAAAATACACCAGTATCTTCTGTCACTGTATTTTGCAATGGAGGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168440.3 ENSMUST00000234082.2 |
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