Pregenerated sensors for VMN2R115 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091076Ensembl transcript IDs: ENSMUST00000168175.3, ENSMUST00000234796.2
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CCTTGCTCTTCTTTAAACATGGGATGTCATAGCCAGCAGCGCCAGTaGGTTTCTTGGCCAACAAACCCAGGTCTGCTGATCTCAGCACAG | + |
Preference number: 1 (lower is better) Translates to: PCSSLNMGCHSQQRQ*VSWPTNPGLLISAQ Trigger: CTGTGCTGAGATCAGCAGACCTGGGTTTGTTGGCCAAGAAACTCACTGGCGCTGCTGGCTATGACATCCCATGTTTAAAGAAGAGCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR TCA 90 bp | TGTTGTTACAGGTGTTTGGTGACAGCAGTTGGTGGGGCTGAGTATTaGATCAGTTCCTCTACAAGAACAGGCCATGATTATATCTGCAGA | + |
Preference number: 1 (lower is better) Translates to: CCYRCLVTAVGGAEY*ISSSTRTGHDYICR Trigger: TCTGCAGATATAATCATGGCCTGTTCTTGTAGAGGAACTGATTCAATACTCAGCCCCACCAACTGCTGTCACCAAACACCTGTAACAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR GCA 90 bp | TTGTCCATCAATATCAACAGAAGGAGGAGAAGCTCCCAGCCAGACTaGACATACAATAACTTGGATGAGAATACAAACGGGAATGATGTA | + |
Preference number: 1 (lower is better) Translates to: LSININRRRRSSQPD*TYNNLDENTNGNDV Trigger: TACATCATTCCCGTTTGTATTCTCATCCAAGTTATTGTATGTGCAGTCTGGCTGGGAGCTTCTCCTCCTTCTGTTGATATTGATGGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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3UTR-3UTR TCA 90 bp | GTTTGCTGTCCCAGGTATGGGCATACTGGGTGGCTGGGAATGGGAAGCAGCCTTGGTGGGGCTGAGTATTaGATCAGTTCCTCTACAAGA | + |
Preference number: 2 (lower is better) Translates to: VCCPRYGHTGWLGMGSSLGGAEY*ISSSTR Trigger: TCTTGTAGAGGAACTGATTCAATACTCAGCCCCACC...AAGGCTGCTTCCCATTCCCAGCCACCCAGTATGCCCATACCTGGGACAGCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR-3UTR TCA 90 bp | GTTTGCTGTCCCAGGTATGGGCATACTGGGTGGCTGGGAATGGGAAGCAGCCTTCTGAGGACCAGGAAGTaGGGCAGGATTTGTAATGTA | + |
Preference number: 2 (lower is better) Translates to: VCCPRYGHTGWLGMGSSLLRTRK*GRICNV Trigger: TACATTACAAATCCTGCCTCACTTCCTGGTCCTCAG...AAGGCTGCTTCCCATTCCCAGCCACCCAGTATGCCCATACCTGGGACAGCAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR-3UTR TCA 90 bp | GTTTGCTGTCCCAGGTATGGGCATACTGGGTGGCTGGGAATGGGAAGCAGCCTTACGAGCATTGGAAGATaGTTTCACCCTGATCATTTC | + |
Preference number: 2 (lower is better) Translates to: VCCPRYGHTGWLGMGSSLTSIGR*FHPDHF Trigger: GAAATGATCAGGGTGAAATCATCTTCCAATGCTCGT...AAGGCTGCTTCCCATTCCCAGCCACCCAGTATGCCCATACCTGGGACAGCAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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3UTR-3UTR TCA 90 bp | GTTTGCTGTCCCAGGTATGGGCATACTGGGTGGCTGGGAATGGGAAGCAGCCTTTGGAGCCTGTCTGTTTaGACTTTGTTACATTATGCA | + |
Preference number: 2 (lower is better) Translates to: VCCPRYGHTGWLGMGSSLWSLSV*TLLHYA Trigger: TGCATAATGTAACAAAGTTCAAACAGACAGGCTCCA...AAGGCTGCTTCCCATTCCCAGCCACCCAGTATGCCCATACCTGGGACAGCAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR-3UTR TCA 90 bp | GAAGCTCCCAATGGCCAGGGTAGCCAAGTATCCCAGAACACAGTAAAATGCATTGGTGGGGCTGAGTATTaGATCAGTTCCTCTACAAGA | + |
Preference number: 2 (lower is better) Translates to: EAPNGQGSQVSQNTVKCIGGAEY*ISSSTR Trigger: TCTTGTAGAGGAACTGATTCAATACTCAGCCCCACC...AATGCATTTTACTGTGTTCTGGGATACTTGGCTACCCTGGCCATTGGGAGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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3UTR-3UTR GCA 90 bp | GCTGATCTCAGCACAGACTTTCAGCAGCTACCGCCTTTGGGTTACTCTGTGGTGATGATGATCTGTCCATaGTCAGATTGTCCATCAATA | + |
Preference number: 2 (lower is better) Translates to: ADLSTDFQQLPPLGYSVVMMICP*SDCPSI Trigger: TATTGATGGACAATCTGAGCATGGACAGATCATCAT...CACCACAGAGTAACCCAAAGGCGGTAGCTGCTGAAAGTCTGTGCTGAGATCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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3UTR-3UTR GCA 90 bp | TGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGTGTGTGTATACGCATCCCAGCATCCCTaGACTGGAGGCCAAAGTGGA | + |
Preference number: 2 (lower is better) Translates to: CRIRLELCAFQSICVCVYASQHP*TGGQSG Trigger: TCCACTTTGGCCTCCAGTGCAGGGATGCTGGGATGC...GTATACACACACACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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3UTR-3UTR TCA 90 bp | TGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGTGTGTGTATACAGCCAGCAGCGCCAGTaGGTTTCTTGGCCAACAAAC | + |
Preference number: 2 (lower is better) Translates to: CRIRLELCAFQSICVCVYSQQRQ*VSWPTN Trigger: GTTTGTTGGCCAAGAAACTCACTGGCGCTGCTGGCT...GTATACACACACACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR-3UTR TCA 90 bp | TCTTTAATCCATGCTACTAGAAGATCTTCTCTAAGTCTTAGAATGGGTCAGGATAGCCAGCAGCGCCAGTaGGTTTCTTGGCCAACAAAC | + |
Preference number: 2 (lower is better) Translates to: SLIHATRRSSLSLRMGQDSQQRQ*VSWPTN Trigger: GTTTGTTGGCCAAGAAACTCACTGGCGCTGCTGGCT...ATCCTGACCCATTCTAAGACTTAGAGAAGATCTTCTAGTAGCATGGATTAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR-3UTR CCA 90 bp | TGCAGTATCTTGGCACTCACAATAATAATACACATATGTAGCAGGGGACTTATGCACTGGAGGCCAAAGTaGAGAAGATCTCCACAGCCA | + |
Preference number: 2 (lower is better) Translates to: CSILALTIIIHICSRGLMHWRPK*RRSPQP Trigger: TGGCTGTGGAGATCTTCTCCACTTTGGCCTCCAGTG...CATAAGTCCCCTGCTACATATGTGTATTATTATTGTGAGTGCCAAGATACTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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3UTR-3UTR TCA 90 bp | TGCAGTATCTTGGCACTCACAATAATAATACACATATGTAGCAGGGGACTTATGAGCAGTTGGTGGGGCTaGGTATTGAATCAGTTCCTC | + |
Preference number: 2 (lower is better) Translates to: CSILALTIIIHICSRGLMSSWWG*VLNQFL Trigger: GAGGAACTGATTCAATACTCAGCCCCACCAACTGCT...CATAAGTCCCCTGCTACATATGTGTATTATTATTGTGAGTGCCAAGATACTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR-3UTR TCA 90 bp | GCCAGTAAGAGAAATTTGCTGAAAGATTACCTTGCTACCTTACAATTGGTTAATGTTACAGGTGTTTGGTaGCAGCAGTTGGTGGGGCTG | + |
Preference number: 2 (lower is better) Translates to: ASKRNLLKDYLATLQLVNVTGVW*QQLVGL Trigger: CAGCCCCACCAACTGCTGTCACCAAACACCTGTAAC...ATTAACCAATTGTAAGGTAGCAAGGTAATCTTTCAGCAAATTTCTCTTACTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR-3UTR TCA 90 bp | GATACCATGCTGTTGTCTGTTTCTACTTGGCTTGCTGTCATCACATCCCTCTTACAAGAACCACAATTGTaGATGCAGAGAAGAACAAGG | + |
Preference number: 2 (lower is better) Translates to: DTMLLSVSTWLAVITSLLQEPQL*MQRRTR Trigger: CCTTGTTCTTCTCTGCATTCACAATTGTGGTTCTTG...TAAGAGGGATGTGATGACAGCAAGCCAAGTAGAAACAGACAACAGCATGGTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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3UTR-3UTR CCA 90 bp | TGCAGTATCTTGGCACTCACAATAATAATACACATATGTAGCAGGGGACTTATGGTTGTAGGATGCAGGTaGCTGCATTTGGATGGCCAA | + |
Preference number: 2 (lower is better) Translates to: CSILALTIIIHICSRGLMVVGCR*LHLDGQ Trigger: TTGGCCATCCAAATGCAGCCACCTGCATCCTACAAC...CATAAGTCCCCTGCTACATATGTGTATTATTATTGTGAGTGCCAAGATACTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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3UTR-3UTR CCA 90 bp | TATAAACTTCATGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGCCAGCATCCCTGCACTaGAGGCCAAAGTGGAGAAGA | + |
Preference number: 2 (lower is better) Translates to: YKLHVGLGWNFVPSKVYVPASLH*RPKWRR Trigger: TCTTCTCCACTTTGGCCTCCAGTGCAGGGATGCTGG...CACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACATGAAGTTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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3UTR-3UTR TCA 90 bp | TGCAGTATCTTGGCACTCACAATAATAATACACATATGTAGCAGGGGACTTATGGTGTGTGTGTGTGTGTaGGTGTTCTTTAGGAGCATA | + |
Preference number: 2 (lower is better) Translates to: CSILALTIIIHICSRGLMVCVCV*VFFRSI Trigger: TATGCTCCTAAAGAACACTCACACACACACACACAC...CATAAGTCCCCTGCTACATATGTGTATTATTATTGTGAGTGCCAAGATACTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR-3UTR TCA 90 bp | GATACCATGCTGTTGTCTGTTTCTACTTGGCTTGCTGTCATCACATCCCTCTTAATACAATTCCAAATGTaGTTTGTTGTAGGATGCAGG | + |
Preference number: 2 (lower is better) Translates to: DTMLLSVSTWLAVITSLLIQFQM*FVVGCR Trigger: CCTGCATCCTACAACAAATCACATTTGGAATTGTAT...TAAGAGGGATGTGATGACAGCAAGCCAAGTAGAAACAGACAACAGCATGGTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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3UTR-3UTR GCA 90 bp | GATACCATGCTGTTGTCTGTTTCTACTTGGCTTGCTGTCATCACATCCCTCTTATCAAAGCTGATCTTTTaGACAGAGTCACCTAAATTC | + |
Preference number: 2 (lower is better) Translates to: DTMLLSVSTWLAVITSLLSKLIF*TESPKF Trigger: GAATTTAGGTGACTCTGTGCAAAAGATCAGCTTTGA...TAAGAGGGATGTGATGACAGCAAGCCAAGTAGAAACAGACAACAGCATGGTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR CAA 90 bp | CCTGAAACTAGAAAGTACTTCATCATTCTTTGGGAGGCTATGATTTaGAATGCCAGAACTACAGTAATCGTTTTAGCCAAGACAGTGGAA | + |
Preference number: 2 (lower is better) Translates to: PETRKYFIILWEAMI*NARTTVIVLAKTVE Trigger: TTCCACTGTCTTGGCTAAAACGATTACTGTAGTTCTGGCATTCAAAATCATAGCCTCCCAAAGAATGATGAAGTACTTTCTAGTTTCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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3UTR-3UTR TCA 90 bp | TGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGTGTGTGTATACTGTATGTGTGTTATGTaGGAAATAGTTGGAGCCTGT | + |
Preference number: 2 (lower is better) Translates to: CRIRLELCAFQSICVCVYCMCVM*EIVGAC Trigger: ACAGGCTCCAACTATTTCTCACATAACACACATACA...GTATACACACACACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR-3UTR GCA 90 bp | GTTTGGCTTAAGCCATCAAACCTGCAAGTATTATGTGTTTGTCTGTCTCTCTGTGGCTATGATTTTGAATaGCAGAACTACAGTAATCGT | + |
Preference number: 2 (lower is better) Translates to: VWLKPSNLQVLCVCLSLCGYDFE*QNYSNR Trigger: ACGATTACTGTAGTTCTGGCATTCAAAATCATAGCC...ACAGAGAGACAGACAAACACATAATACTTGCAGGTTTGATGGCTTAAGCCAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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3UTR-3UTR TCA 90 bp | TATAAACTTCATGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGTGTATGTGTGTTATGTaGGAAATAGTTGGAGCCTGT | + |
Preference number: 2 (lower is better) Translates to: YKLHVGLGWNFVPSKVYVCMCVM*EIVGAC Trigger: ACAGGCTCCAACTATTTCTCACATAACACACATACA...CACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACATGAAGTTTATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR-3UTR GCA 90 bp | TGCAGTATCTTGGCACTCACAATAATAATACACATATGTAGCAGGGGACTTATGTTAAGCCATCAAACCTaGAAGTATTATGTGTTTGTC | + |
Preference number: 2 (lower is better) Translates to: CSILALTIIIHICSRGLMLSHQT*KYYVFV Trigger: GACAAACACATAATACTTGCAGGTTTGATGGCTTAA...CATAAGTCCCCTGCTACATATGTGTATTATTATTGTGAGTGCCAAGATACTGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR-3UTR CCA 90 bp | TGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGTGTGTGTATACTATGAAAATTGCAAATaGTCTTACACTCCTCACTGT | + |
Preference number: 2 (lower is better) Translates to: CRIRLELCAFQSICVCVYYENCK*SYTPHC Trigger: ACAGTGAGGAGTGTAAGACCATTTGCAATTTTCATA...GTATACACACACACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR-3UTR CCA 90 bp | TCTTTAATCCATGCTACTAGAAGATCTTCTCTAAGTCTTAGAATGGGTCAGGATGCACATACAATAACTTaGATGAGAATACAAACGGGA | + |
Preference number: 2 (lower is better) Translates to: SLIHATRRSSLSLRMGQDAHTIT*MRIQTG Trigger: TCCCGTTTGTATTCTCATCCAAGTTATTGTATGTGC...ATCCTGACCCATTCTAAGACTTAGAGAAGATCTTCTAGTAGCATGGATTAAAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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3UTR TCA 72 bp | GCCAGTGAGTTTCTTGGCCAACAAACCCAGGTCTGCTaGTCTCAGCACAGACTTTCAGCAGCTACCGCCTTT | + |
Preference number: 3 (lower is better) Translates to: ASEFLGQQTQVC*SQHRLSAATAF Trigger: AAAGGCGGTAGCTGCTGAAAGTCTGTGCTGAGATCAGCAGACCTGGGTTTGTTGGCCAAGAAACTCACTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR GCA 72 bp | TTTTTGGGAGAGGGTGCATCTACTCCTATAGTGGTTTaGTGTCCCAGGTATGGGCATACTGGGTGGCTGGGA | + |
Preference number: 3 (lower is better) Translates to: FLGEGASTPIVV*CPRYGHTGWLG Trigger: TCCCAGCCACCCAGTATGCCCATACCTGGGACAGCAAACCACTATAGGAGTAGATGCACCCTCTCCCAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR-3UTR CAA 90 bp | GCTGATCTCAGCACAGACTTTCAGCAGCTACCGCCTTTGGGTTACTCTGTGGTGCACCTTACGAGAACATaGAAAAGCAGACTCCCAGTG | + |
Preference number: 3 (lower is better) Translates to: ADLSTDFQQLPPLGYSVVHLTRT*KSRLPV Trigger: CACTGGGAGTCTGCTTTTCAATGTTCTCGTAAGGTG...CACCACAGAGTAACCCAAAGGCGGTAGCTGCTGAAAGTCTGTGCTGAGATCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR CCA 72 bp | TCCTATAGTGGTTTGCTGTCCCAGGTATGGGCATACTaGGTGGCTGGGAATGGGAAGCAGCCTTTCATATGT | + |
Preference number: 3 (lower is better) Translates to: SYSGLLSQVWAY*VAGNGKQPFIC Trigger: ACATATGAAAGGCTGCTTCCCATTCCCAGCCACCCAGTATGCCCATACCTGGGACAGCAAACCACTATAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR-3UTR CAA 90 bp | GTTTGCTGTCCCAGGTATGGGCATACTGGGTGGCTGGGAATGGGAAGCAGCCTTGCCAGTAAGAGAAATTaGCTGAAAGATTACCTTGCT | + |
Preference number: 3 (lower is better) Translates to: VCCPRYGHTGWLGMGSSLASKRN*LKDYLA Trigger: AGCAAGGTAATCTTTCAGCAAATTTCTCTTACTGGC...AAGGCTGCTTCCCATTCCCAGCCACCCAGTATGCCCATACCTGGGACAGCAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR TCA 72 bp | TCTTTAAACATGGGATGTCATAGCCAGCAGCGCCAGTaGGTTTCTTGGCCAACAAACCCAGGTCTGCTGATC | + |
Preference number: 3 (lower is better) Translates to: SLNMGCHSQQRQ*VSWPTNPGLLI Trigger: GATCAGCAGACCTGGGTTTGTTGGCCAAGAAACTCACTGGCGCTGCTGGCTATGACATCCCATGTTTAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR-3UTR CAA 90 bp | GTTTGCTGTCCCAGGTATGGGCATACTGGGTGGCTGGGAATGGGAAGCAGCCTTATAGCTTCAGGTAAATaGCAACCCAAAAGAGATCAT | + |
Preference number: 3 (lower is better) Translates to: VCCPRYGHTGWLGMGSSLIASGK*QPKRDH Trigger: ATGATCTCTTTTGGGTTGCAATTTACCTGAAGCTAT...AAGGCTGCTTCCCATTCCCAGCCACCCAGTATGCCCATACCTGGGACAGCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR-3UTR CAA 90 bp | GCTGATCTCAGCACAGACTTTCAGCAGCTACCGCCTTTGGGTTACTCTGTGGTGATAGCTTCAGGTAAATaGCAACCCAAAAGAGATCAT | + |
Preference number: 3 (lower is better) Translates to: ADLSTDFQQLPPLGYSVVIASGK*QPKRDH Trigger: ATGATCTCTTTTGGGTTGCAATTTACCTGAAGCTAT...CACCACAGAGTAACCCAAAGGCGGTAGCTGCTGAAAGTCTGTGCTGAGATCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR-3UTR CAA 90 bp | GATACCATGCTGTTGTCTGTTTCTACTTGGCTTGCTGTCATCACATCCCTCTTAGACAGACAGACTTTTTaGGGAGAGGGTGCATCTACT | + |
Preference number: 3 (lower is better) Translates to: DTMLLSVSTWLAVITSLLDRQTF*GEGAST Trigger: AGTAGATGCACCCTCTCCCAAAAAAGTCTGTCTGTC...TAAGAGGGATGTGATGACAGCAAGCCAAGTAGAAACAGACAACAGCATGGTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR TCA 72 bp | AGGTGTTTGGTGACAGCAGTTGGTGGGGCTGAGTATTaGATCAGTTCCTCTACAAGAACAGGCCATGATTAT | + |
Preference number: 3 (lower is better) Translates to: RCLVTAVGGAEY*ISSSTRTGHDY Trigger: ATAATCATGGCCTGTTCTTGTAGAGGAACTGATTCAATACTCAGCCCCACCAACTGCTGTCACCAAACACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR TCA 72 bp | AGCTACCGCCTTTGGGTTACTCTGTGGTGTCAAAGCTaGTCTTTTGCACAGAGTCACCTAAATTCCACACAT | + |
Preference number: 3 (lower is better) Translates to: SYRLWVTLWCQS*SFAQSHLNSTH Trigger: ATGTGTGGAATTTAGGTGACTCTGTGCAAAAGATCAGCTTTGACACCACAGAGTAACCCAAAGGCGGTAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR GCA 72 bp | AATATCAACAGAAGGAGGAGAAGCTCCCAGCCAGACTaGACATACAATAACTTGGATGAGAATACAAACGGG | + |
Preference number: 3 (lower is better) Translates to: NINRRRRSSQPD*TYNNLDENTNG Trigger: CCCGTTTGTATTCTCATCCAAGTTATTGTATGTGCAGTCTGGCTGGGAGCTTCTCCTCCTTCTGTTGATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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3UTR-3UTR CAA 90 bp | TGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGTGTGTGTATACTGTTGTTACAGGTGTTaGGTGACAGCAGTTGGTGGG | + |
Preference number: 3 (lower is better) Translates to: CRIRLELCAFQSICVCVYCCYRC*VTAVGG Trigger: CCCACCAACTGCTGTCACCAAACACCTGTAACAACA...GTATACACACACACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR TCA 72 bp | ATCTGGTTAATTGTAGCTGTTGTTACAGGTGTTTGGTaGCAGCAGTTGGTGGGGCTGAGTATTGAATCAGTT | + |
Preference number: 3 (lower is better) Translates to: IWLIVAVVTGVW*QQLVGLSIESV Trigger: AACTGATTCAATACTCAGCCCCACCAACTGCTGTCACCAAACACCTGTAACAACAGCTACAATTAACCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR GCA 72 bp | ACTGAACCCTTGTGGCATACAATGATGATCTGTCCATaGTCAGATTGTCCATCAATATCAACAGAAGGAGGA | + |
Preference number: 3 (lower is better) Translates to: TEPLWHTMMICP*SDCPSISTEGG Trigger: TCCTCCTTCTGTTGATATTGATGGACAATCTGAGCATGGACAGATCATCATTGTATGCCACAAGGGTTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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3UTR-3UTR CAA 90 bp | TCTTTAATCCATGCTACTAGAAGATCTTCTCTAAGTCTTAGAATGGGTCAGGATTGTTGTTACAGGTGTTaGGTGACAGCAGTTGGTGGG | + |
Preference number: 3 (lower is better) Translates to: SLIHATRRSSLSLRMGQDCCYRC*VTAVGG Trigger: CCCACCAACTGCTGTCACCAAACACCTGTAACAACA...ATCCTGACCCATTCTAAGACTTAGAGAAGATCTTCTAGTAGCATGGATTAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR-3UTR CAA 90 bp | TGCAGTATCTTGGCACTCACAATAATAATACACATATGTAGCAGGGGACTTATGCACCTTACGAGAACATaGAAAAGCAGACTCCCAGTG | + |
Preference number: 3 (lower is better) Translates to: CSILALTIIIHICSRGLMHLTRT*KSRLPV Trigger: CACTGGGAGTCTGCTTTTCAATGTTCTCGTAAGGTG...CATAAGTCCCCTGCTACATATGTGTATTATTATTGTGAGTGCCAAGATACTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR-3UTR CAA 90 bp | ACCTGCAAGTATTATGTGTTTGTCTGTCTCTCTGTCTCTTTGTCTGTCTCTTGTTGGGAGGCTATGATTTaGAATGCCAGAACTACAGTA | + |
Preference number: 3 (lower is better) Translates to: TCKYYVFVCLSVSLSVSCWEAMI*NARTTV Trigger: TACTGTAGTTCTGGCATTCAAAATCATAGCCTCCCA...ACAAGAGACAGACAAAGAGACAGAGAGACAGACAAACACATAATACTTGCAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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3UTR-3UTR CAA 90 bp | GTTTGGCTTAAGCCATCAAACCTGCAAGTATTATGTGTTTGTCTGTCTCTCTGTCCCAGTGTAAAGTTTTaGTCACATTCTTCTGTATCT | + |
Preference number: 3 (lower is better) Translates to: VWLKPSNLQVLCVCLSLCPSVKF*SHSSVS Trigger: AGATACAGAAGAATGTGACAAAAACTTTACACTGGG...ACAGAGAGACAGACAAACACATAATACTTGCAGGTTTGATGGCTTAAGCCAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
||
3UTR-3UTR CAA 90 bp | TGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGTGTGTGTATACGCCAGTAAGAGAAATTaGCTGAAAGATTACCTTGCT | + |
Preference number: 3 (lower is better) Translates to: CRIRLELCAFQSICVCVYASKRN*LKDYLA Trigger: AGCAAGGTAATCTTTCAGCAAATTTCTCTTACTGGC...GTATACACACACACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
||
3UTR-3UTR CAA 90 bp | TGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGTGTGTGTATACTGCACATACAATAACTaGGATGAGAATACAAACGGG | + |
Preference number: 3 (lower is better) Translates to: CRIRLELCAFQSICVCVYCTYNN*DENTNG Trigger: CCCGTTTGTATTCTCATCCAAGTTATTGTATGTGCA...GTATACACACACACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
||
3UTR GCA 72 bp | GTACTTCATCATTCTTTGGGAGGCTATGATTTTGAATaGCAGAACTACAGTAATCGTTTTAGCCAAGACAGT | + |
Preference number: 3 (lower is better) Translates to: VLHHSLGGYDFE*QNYSNRFSQDS Trigger: ACTGTCTTGGCTAAAACGATTACTGTAGTTCTGGCATTCAAAATCATAGCCTCCCAAAGAATGATGAAGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
||
3UTR CCA 72 bp | ATTGCCCCTGAAACTAGAAAGTACTTCATCATTCTTTaGGAGGCTATGATTTTGAATGCCAGAACTACAGTA | + |
Preference number: 3 (lower is better) Translates to: IAPETRKYFIIL*EAMILNARTTV Trigger: TACTGTAGTTCTGGCATTCAAAATCATAGCCTCCCAAAGAATGATGAAGTACTTTCTAGTTTCAGGGGCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
||
3UTR-3UTR CAA 90 bp | GCCAGTAAGAGAAATTTGCTGAAAGATTACCTTGCTACCTTACAATTGGTTAATTTTATGTCATTTGATTaGTGGGCATATGTCTGTGTG | + |
Preference number: 3 (lower is better) Translates to: ASKRNLLKDYLATLQLVNFMSFD*WAYVCV Trigger: CACACAGACATATGCCCACAAATCAAATGACATAAA...ATTAACCAATTGTAAGGTAGCAAGGTAATCTTTCAGCAAATTTCTCTTACTGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
||
3UTR TCA 72 bp | ACTACAAATTTCTGTCTGCCAGTAAGAGAAATTTGCTaGAAGATTACCTTGCTACCTTACAATTGGTTAATC | + |
Preference number: 3 (lower is better) Translates to: TTNFCLPVREIC*KITLLPYNWLI Trigger: GATTAACCAATTGTAAGGTAGCAAGGTAATCTTTCAGCAAATTTCTCTTACTGGCAGACAGAAATTTGTAGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
||
3UTR CCA 72 bp | TGTATATATGTGTATAAACTTCATGTAGGATTAGGTTaGAACTTTGTGCCTTCCAAAGTATATGTGTGTGTG | + |
Preference number: 3 (lower is better) Translates to: CIYVYKLHVGLG*NFVPSKVYVCV Trigger: CACACACACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACATGAAGTTTATACACATATATACA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
||
CDS-3UTR GCA 90 bp | GTTTGCTGTCCCAGGTATGGGCATACTGGGTGGCTGGGAATGGGAAGCAGCCTTACTGGAGTACTGTGGTaGTTCACAATGACCCCAAGA | + |
Preference number: 4 (lower is better) Translates to: VCCPRYGHTGWLGMGSSLTGVLW*FTMTPR Trigger: TCTTGGGGTCATTGTGAAGCACCACAGTACTCCAGT...AAGGCTGCTTCCCATTCCCAGCCACCCAGTATGCCCATACCTGGGACAGCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
||
CDS-3UTR TCA 90 bp | GCTGATCTCAGCACAGACTTTCAGCAGCTACCGCCTTTGGGTTACTCTGTGGTGGATCATTGTCTGAGATaGCCAACCCTACCCAGTTCC | + |
Preference number: 4 (lower is better) Translates to: ADLSTDFQQLPPLGYSVVDHCLR*PTLPSS Trigger: GGAACTGGGTAGGGTTGGTCATCTCAGACAATGATC...CACCACAGAGTAACCCAAAGGCGGTAGCTGCTGAAAGTCTGTGCTGAGATCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
||
CDS-3UTR CCA 90 bp | GTTTGCTGTCCCAGGTATGGGCATACTGGGTGGCTGGGAATGGGAAGCAGCCTTGTACATCCTGTTCCCTaGTTTCTGTCCCTGTTTTCA | + |
Preference number: 4 (lower is better) Translates to: VCCPRYGHTGWLGMGSSLVHPVP*FLSLFS Trigger: TGAAAACAGGGACAGAAACCAGGGAACAGGATGTAC...AAGGCTGCTTCCCATTCCCAGCCACCCAGTATGCCCATACCTGGGACAGCAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
||
CDS-3UTR GCA 90 bp | GTTTGCTGTCCCAGGTATGGGCATACTGGGTGGCTGGGAATGGGAAGCAGCCTTCTGTGCACTTCCTTTTaGCCACTCTATCATATCTTC | + |
Preference number: 4 (lower is better) Translates to: VCCPRYGHTGWLGMGSSLLCTSF*PLYHIF Trigger: GAAGATATGATAGAGTGGGCAAAAGGAAGTGCACAG...AAGGCTGCTTCCCATTCCCAGCCACCCAGTATGCCCATACCTGGGACAGCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
||
CDS-3UTR GCA 90 bp | GTTTGCTGTCCCAGGTATGGGCATACTGGGTGGCTGGGAATGGGAAGCAGCCTTTTTCAGGACAAGGTTTaGAATGAAAACAGCATGCTG | + |
Preference number: 4 (lower is better) Translates to: VCCPRYGHTGWLGMGSSLFQDKV*NENSML Trigger: CAGCATGCTGTTTTCATTGCAAACCTTGTCCTGAAA...AAGGCTGCTTCCCATTCCCAGCCACCCAGTATGCCCATACCTGGGACAGCAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
||
3UTR CAA 72 bp | GCTGATCTCAGCACAGACTTTCAGCAGCTACCGCCTTaGGGTTACTCTGTGGTGTCAAAGCTGATCTTTTGC | + |
Preference number: 4 (lower is better) Translates to: ADLSTDFQQLPP*GYSVVSKLIFC Trigger: GCAAAAGATCAGCTTTGACACCACAGAGTAACCCAAAGGCGGTAGCTGCTGAAAGTCTGTGCTGAGATCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR TCA 90 bp | GTTTGCTGTCCCAGGTATGGGCATACTGGGTGGCTGGGAATGGGAAGCAGCCTTATACAATTCCAAATGTaGTTTGTTGTAGGATGCAGG | + |
Preference number: 4 (lower is better) Translates to: VCCPRYGHTGWLGMGSSLIQFQM*FVVGCR Trigger: CCTGCATCCTACAACAAATCACATTTGGAATTGTAT...AAGGCTGCTTCCCATTCCCAGCCACCCAGTATGCCCATACCTGGGACAGCAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS-3UTR GCA 90 bp | GCTGATCTCAGCACAGACTTTCAGCAGCTACCGCCTTTGGGTTACTCTGTGGTGAGTTATCTGATGGAGTaGGTGGGCAAAAGCATAAAC | + |
Preference number: 4 (lower is better) Translates to: ADLSTDFQQLPPLGYSVVSYLME*VGKSIN Trigger: GTTTATGCTTTTGCCCACGCACTCCATCAGATAACT...CACCACAGAGTAACCCAAAGGCGGTAGCTGCTGAAAGTCTGTGCTGAGATCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
||
CDS-3UTR TCA 90 bp | GCTGATCTCAGCACAGACTTTCAGCAGCTACCGCCTTTGGGTTACTCTGTGGTGAGAAATTGGATACCTTaGTCATTGTCTGAGATGACC | + |
Preference number: 4 (lower is better) Translates to: ADLSTDFQQLPPLGYSVVRNWIP*SLSEMT Trigger: GGTCATCTCAGACAATGATCAAGGTATCCAATTTCT...CACCACAGAGTAACCCAAAGGCGGTAGCTGCTGAAAGTCTGTGCTGAGATCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR GCA 90 bp | GCTGATCTCAGCACAGACTTTCAGCAGCTACCGCCTTTGGGTTACTCTGTGGTGGCTTGTAAGCGCCATTaGACATTTGGTGTATTCTTT | + |
Preference number: 4 (lower is better) Translates to: ADLSTDFQQLPPLGYSVVACKRH*TFGVFF Trigger: AAAGAATACACCAAATGTGCAATGGCGCTTACAAGC...CACCACAGAGTAACCCAAAGGCGGTAGCTGCTGAAAGTCTGTGCTGAGATCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR CCA 90 bp | GCTGATCTCAGCACAGACTTTCAGCAGCTACCGCCTTTGGGTTACTCTGTGGTGTGCAGTTTGTCTCTTTaGTTCATATTCACTCTGTCC | + |
Preference number: 4 (lower is better) Translates to: ADLSTDFQQLPPLGYSVVCSLSL*FIFTLS Trigger: GGACAGAGTGAATATGAACCAAAGAGACAAACTGCA...CACCACAGAGTAACCCAAAGGCGGTAGCTGCTGAAAGTCTGTGCTGAGATCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR GCA 90 bp | TGCAGTATCTTGGCACTCACAATAATAATACACATATGTAGCAGGGGACTTATGGCATCCCAGCATCCCTaGACTGGAGGCCAAAGTGGA | + |
Preference number: 4 (lower is better) Translates to: CSILALTIIIHICSRGLMASQHP*TGGQSG Trigger: TCCACTTTGGCCTCCAGTGCAGGGATGCTGGGATGC...CATAAGTCCCCTGCTACATATGTGTATTATTATTGTGAGTGCCAAGATACTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS-3UTR CCA 90 bp | AAAGCCAGAGTGAAGCTCCCAATGGCCAGGGTAGCCAAGTATCCCAGAACACAGAAATCCAAGGCCATGTaGGAAATTCCAAATGTAGAA | + |
Preference number: 4 (lower is better) Translates to: KARVKLPMARVAKYPRTQKSKAM*EIPNVE Trigger: TTCTACATTTGGAATTTCCCACATGGCCTTGGATTT...CTGTGTTCTGGGATACTTGGCTACCCTGGCCATTGGGAGCTTCACTCTGGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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CDS-3UTR CCA 90 bp | TCCTCTTTAATCCATGCTACTAGAAGATCTTCTCTAAGTCTTAGAATGGGTCAGCCAGCATCCCTGCACTaGAGGCCAAAGTGGAGAAGA | + |
Preference number: 4 (lower is better) Translates to: SSLIHATRRSSLSLRMGQPASLH*RPKWRR Trigger: TCTTCTCCACTTTGGCCTCCAGTGCAGGGATGCTGG...CTGACCCATTCTAAGACTTAGAGAAGATCTTCTAGTAGCATGGATTAAAGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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3UTR CAA 72 bp | CTTGTGGCATACAATGATGATCTGTCCATGCTCAGATaGTCCATCAATATCAACAGAAGGAGGAGAAGCTCC | + |
Preference number: 4 (lower is better) Translates to: LVAYNDDLSMLR*SININRRRRSS Trigger: GGAGCTTCTCCTCCTTCTGTTGATATTGATGGACAATCTGAGCATGGACAGATCATCATTGTATGCCACAAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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CDS-3UTR TCA 90 bp | GATACCATGCTGTTGTCTGTTTCTACTTGGCTTGCTGTCATCACATCCCTCTTAAACCGAAATGAATTATaGAGGATACCAGGCCAAAGG | + |
Preference number: 4 (lower is better) Translates to: DTMLLSVSTWLAVITSLLNRNEL*RIPGQR Trigger: CCTTTGGCCTGGTATCCTTCATAATTCATTTCGGTT...TAAGAGGGATGTGATGACAGCAAGCCAAGTAGAAACAGACAACAGCATGGTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR CCA 90 bp | TCTTTAATCCATGCTACTAGAAGATCTTCTCTAAGTCTTAGAATGGGTCAGGATCACTGGAGGCCAAAGTaGAGAAGATCTCCACAGCCA | + |
Preference number: 4 (lower is better) Translates to: SLIHATRRSSLSLRMGQDHWRPK*RRSPQP Trigger: TGGCTGTGGAGATCTTCTCCACTTTGGCCTCCAGTG...ATCCTGACCCATTCTAAGACTTAGAGAAGATCTTCTAGTAGCATGGATTAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS-3UTR TCA 90 bp | CTGTTATTGGCCTTAACAACTGGAGTACTGTGGTGCTTCACAATGACCCCAAGATCATTGGAATCATGTTaGCAAAAGCAAAGCAGATTG | + |
Preference number: 4 (lower is better) Translates to: LLLALTTGVLWCFTMTPRSLESC*QKQSRL Trigger: CAATCTGCTTTGCTTTTGTCAACATGATTCCAATGA...TCTTGGGGTCATTGTGAAGCACCACAGTACTCCAGTTGTTAAGGCCAATAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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CDS-3UTR TCA 90 bp | ACCTGCAAGTATTATGTGTTTGTCTGTCTCTCTGTCTCTTTGTCTGTCTCTTGTACTCATCTGGGCATTTaGCAGAGTTCAATGTCTGGA | + |
Preference number: 4 (lower is better) Translates to: TCKYYVFVCLSVSLSVSCTHLGI*QSSMSG Trigger: TCCAGACATTGAACTCTGTCAAATGCCCAGATGAGT...ACAAGAGACAGACAAAGAGACAGAGAGACAGACAAACACATAATACTTGCAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR TCA 90 bp | GTTTGGCTTAAGCCATCAAACCTGCAAGTATTATGTGTTTGTCTGTCTCTCTGTGGACAAGGTTTGCAATaGAAACAGCATGCTGCCATT | + |
Preference number: 4 (lower is better) Translates to: VWLKPSNLQVLCVCLSLCGQGLQ*KQHAAI Trigger: AATGGCAGCATGCTGTTTTCATTGCAAACCTTGTCC...ACAGAGAGACAGACAAACACATAATACTTGCAGGTTTGATGGCTTAAGCCAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS-3UTR GCA 90 bp | CTGTTATTGGCCTTAACAACTGGAGTACTGTGGTGCTTCACAATGACCCCAAGAAAATTTCACAGTTGTTaGCCAATTCAGGCTTGTAAG | + |
Preference number: 4 (lower is better) Translates to: LLLALTTGVLWCFTMTPRKFHSC*PIQACK Trigger: CTTACAAGCCTGAATTGGGCAACAACTGTGAAATTT...TCTTGGGGTCATTGTGAAGCACCACAGTACTCCAGTTGTTAAGGCCAATAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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CDS-3UTR CCA 90 bp | ACCTGCAAGTATTATGTGTTTGTCTGTCTCTCTGTCTCTTTGTCTGTCTCTTGTGTACATCCTGTTCCCTaGTTTCTGTCCCTGTTTTCA | + |
Preference number: 4 (lower is better) Translates to: TCKYYVFVCLSVSLSVSCVHPVP*FLSLFS Trigger: TGAAAACAGGGACAGAAACCAGGGAACAGGATGTAC...ACAAGAGACAGACAAAGAGACAGAGAGACAGACAAACACATAATACTTGCAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR CAA 72 bp | AGGAGAAGCTCCCAGCCAGACTGCACATACAATAACTaGGATGAGAATACAAACGGGAATGATGTAGTTAAT | + |
Preference number: 4 (lower is better) Translates to: RRSSQPDCTYNN*DENTNGNDVVN Trigger: ATTAACTACATCATTCCCGTTTGTATTCTCATCCAAGTTATTGTATGTGCAGTCTGGCTGGGAGCTTCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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CDS-3UTR TCA 90 bp | GCCAGTAAGAGAAATTTGCTGAAAGATTACCTTGCTACCTTACAATTGGTTAATGATCATTGTCTGAGATaGCCAACCCTACCCAGTTCC | + |
Preference number: 4 (lower is better) Translates to: ASKRNLLKDYLATLQLVNDHCLR*PTLPSS Trigger: GGAACTGGGTAGGGTTGGTCATCTCAGACAATGATC...ATTAACCAATTGTAAGGTAGCAAGGTAATCTTTCAGCAAATTTCTCTTACTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR TCA 90 bp | TGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGTGTGTGTATACACTCATCTGGGCATTTaGCAGAGTTCAATGTCTGGA | + |
Preference number: 4 (lower is better) Translates to: CRIRLELCAFQSICVCVYTHLGI*QSSMSG Trigger: TCCAGACATTGAACTCTGTCAAATGCCCAGATGAGT...GTATACACACACACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR GCA 90 bp | TGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGTGTGTGTATACATTTGGGAACAAATATaGATCCCAGCATCCCTGCAC | + |
Preference number: 4 (lower is better) Translates to: CRIRLELCAFQSICVCVYIWEQI*IPASLH Trigger: GTGCAGGGATGCTGGGATGCATATTTGTTCCCAAAT...GTATACACACACACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS-3UTR CCA 90 bp | GCCAGTAAGAGAAATTTGCTGAAAGATTACCTTGCTACCTTACAATTGGTTAATGTTGTAGGATGCAGGTaGCTGCATTTGGATGGCCAA | + |
Preference number: 4 (lower is better) Translates to: ASKRNLLKDYLATLQLVNVVGCR*LHLDGQ Trigger: TTGGCCATCCAAATGCAGCCACCTGCATCCTACAAC...ATTAACCAATTGTAAGGTAGCAAGGTAATCTTTCAGCAAATTTCTCTTACTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS-3UTR TCA 90 bp | TGCAGTATCTTGGCACTCACAATAATAATACACATATGTAGCAGGGGACTTATGAACCGAAATGAATTATaGAGGATACCAGGCCAAAGG | + |
Preference number: 4 (lower is better) Translates to: CSILALTIIIHICSRGLMNRNEL*RIPGQR Trigger: CCTTTGGCCTGGTATCCTTCATAATTCATTTCGGTT...CATAAGTCCCCTGCTACATATGTGTATTATTATTGTGAGTGCCAAGATACTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR GCA 90 bp | TTAGAATGGGTCAGGATTCTATTATCTCTTTCTGTCCAAAGGGAAAAGTGTTTTGCAATGAAAACAGCATaGTGCCATTCCGTCCATCCT | + |
Preference number: 4 (lower is better) Translates to: LEWVRILLSLSVQREKCFAMKTA*CHSVHP Trigger: AGGATGGACGGAATGGCAGCATGCTGTTTTCATTGC...AAAACACTTTTCCCTTTGGACAGAAAGAGATAATAGAATCCTGACCCATTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS-3UTR CCA 90 bp | TACTTCATCATTCTTTGGGAGGCTATGATTTTGAATGCCAGAACTACAGTAATCATCAGCCAGAAGAAGTaGAATGTTCAGGAGCCAGAA | + |
Preference number: 4 (lower is better) Translates to: YFIILWEAMILNARTTVIISQKK*NVQEPE Trigger: TTCTGGCTCCTGAACATTCCACTTCTTCTGGCTGAT...GATTACTGTAGTTCTGGCATTCAAAATCATAGCCTCCCAAAGAATGATGAAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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CDS-3UTR TCA 90 bp | GTTTGGCTTAAGCCATCAAACCTGCAAGTATTATGTGTTTGTCTGTCTCTCTGTATTTTACGAATGCAGTaGTTCTGTTCTGTGTTAGCA | + |
Preference number: 4 (lower is better) Translates to: VWLKPSNLQVLCVCLSLCILRMQ*FCSVLA Trigger: TGCTAACACAGAACAGAATCACTGCATTCGTAAAAT...ACAGAGAGACAGACAAACACATAATACTTGCAGGTTTGATGGCTTAAGCCAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR GCA 90 bp | TCCTCTTTAATCCATGCTACTAGAAGATCTTCTCTAAGTCTTAGAATGGGTCAGGCTTGTAAGCGCCATTaGACATTTGGTGTATTCTTT | + |
Preference number: 4 (lower is better) Translates to: SSLIHATRRSSLSLRMGQACKRH*TFGVFF Trigger: AAAGAATACACCAAATGTGCAATGGCGCTTACAAGC...CTGACCCATTCTAAGACTTAGAGAAGATCTTCTAGTAGCATGGATTAAAGAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR GCA 90 bp | TTAGAATGGGTCAGGATTCTATTATCTCTTTCTGTCCAAAGGGAAAAGTGTTTTAGCTCCCAGCCAGACTaGACATACAATAACTTGGAT | + |
Preference number: 4 (lower is better) Translates to: LEWVRILLSLSVQREKCFSSQPD*TYNNLD Trigger: ATCCAAGTTATTGTATGTGCAGTCTGGCTGGGAGCT...AAAACACTTTTCCCTTTGGACAGAAAGAGATAATAGAATCCTGACCCATTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS-3UTR CCA 90 bp | TTAGAATGGGTCAGGATTCTATTATCTCTTTCTGTCCAAAGGGAAAAGTGTTTTATCAGCCAGAAGAAGTaGAATGTTCAGGAGCCAGAA | + |
Preference number: 4 (lower is better) Translates to: LEWVRILLSLSVQREKCFISQKK*NVQEPE Trigger: TTCTGGCTCCTGAACATTCCACTTCTTCTGGCTGAT...AAAACACTTTTCCCTTTGGACAGAAAGAGATAATAGAATCCTGACCCATTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR CCA 90 bp | TGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGTGTGTGTATACTGCAGTTTGTCTCTTTaGTTCATATTCACTCTGTCC | + |
Preference number: 4 (lower is better) Translates to: CRIRLELCAFQSICVCVYCSLSL*FIFTLS Trigger: GGACAGAGTGAATATGAACCAAAGAGACAAACTGCA...GTATACACACACACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR CAA 72 bp | GCCTGGCTGTATTCTGAAGCTTGTTCCTTCCAACAATaGTGTGTGTATATATATGTATGTGTGTTATGTGAG | + |
Preference number: 4 (lower is better) Translates to: AWLYSEACSFQQ*CVYIYVCVLCE Trigger: CTCACATAACACACATACATATATATACACACACAATTGTTGGAAGGAACAAGCTTCAGAATACAGCCAGGC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR TCA 90 bp | TCCTCTTTAATCCATGCTACTAGAAGATCTTCTCTAAGTCTTAGAATGGGTCAGATTTTACGAATGCAGTaGTTCTGTTCTGTGTTAGCA | + |
Preference number: 4 (lower is better) Translates to: SSLIHATRRSSLSLRMGQILRMQ*FCSVLA Trigger: TGCTAACACAGAACAGAATCACTGCATTCGTAAAAT...CTGACCCATTCTAAGACTTAGAGAAGATCTTCTAGTAGCATGGATTAAAGAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
||
CDS-3UTR TCA 90 bp | TATAAACTTCATGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGCAAGAACCACAATTGTaGATGCAGAGAAGAACAAGG | + |
Preference number: 4 (lower is better) Translates to: YKLHVGLGWNFVPSKVYVQEPQL*MQRRTR Trigger: CCTTGTTCTTCTCTGCATTCACAATTGTGGTTCTTG...CACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACATGAAGTTTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS-3UTR TCA 90 bp | TTAGAATGGGTCAGGATTCTATTATCTCTTTCTGTCCAAAGGGAAAAGTGTTTTACGAGCATTGGAAGATaGTTTCACCCTGATCATTTC | + |
Preference number: 4 (lower is better) Translates to: LEWVRILLSLSVQREKCFTSIGR*FHPDHF Trigger: GAAATGATCAGGGTGAAATCATCTTCCAATGCTCGT...AAAACACTTTTCCCTTTGGACAGAAAGAGATAATAGAATCCTGACCCATTCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS-3UTR GCA 90 bp | TCCTCTTTAATCCATGCTACTAGAAGATCTTCTCTAAGTCTTAGAATGGGTCAGAAATTTCACAGTTGTTaGCCAATTCAGGCTTGTAAG | + |
Preference number: 4 (lower is better) Translates to: SSLIHATRRSSLSLRMGQKFHSC*PIQACK Trigger: CTTACAAGCCTGAATTGGGCAACAACTGTGAAATTT...CTGACCCATTCTAAGACTTAGAGAAGATCTTCTAGTAGCATGGATTAAAGAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR CCA 90 bp | GAATGGGTCAGGATTCTATTATCTCTTTCTGTCCAAAGGGAAAAGTGTTTTAGATACCAGATACTCATCTaGGCATTTGACAGAGTTCAA | + |
Preference number: 4 (lower is better) Translates to: EWVRILLSLSVQREKCFRYQILI*AFDRVQ Trigger: TTGAACTCTGTCAAATGCCCAGATGAGTATCTGGTA...TCTAAAACACTTTTCCCTTTGGACAGAAAGAGATAATAGAATCCTGACCCATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR CCA 90 bp | TCTTTAATCCATGCTACTAGAAGATCTTCTCTAAGTCTTAGAATGGGTCAGGATTACCAGATACTCATCTaGGCATTTGACAGAGTTCAA | + |
Preference number: 4 (lower is better) Translates to: SLIHATRRSSLSLRMGQDYQILI*AFDRVQ Trigger: TTGAACTCTGTCAAATGCCCAGATGAGTATCTGGTA...ATCCTGACCCATTCTAAGACTTAGAGAAGATCTTCTAGTAGCATGGATTAAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR CCA 90 bp | TGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGTGTGTGTATACAAATCCAAGGCCATGTaGGAAATTCCAAATGTAGAA | + |
Preference number: 4 (lower is better) Translates to: CRIRLELCAFQSICVCVYKSKAM*EIPNVE Trigger: TTCTACATTTGGAATTTCCCACATGGCCTTGGATTT...GTATACACACACACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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3UTR CAA 72 bp | AGAAAGTACTTCATCATTCTTTGGGAGGCTATGATTTaGAATGCCAGAACTACAGTAATCGTTTTAGCCAAG | + |
Preference number: 4 (lower is better) Translates to: RKYFIILWEAMI*NARTTVIVLAK Trigger: CTTGGCTAAAACGATTACTGTAGTTCTGGCATTCAAAATCATAGCCTCCCAAAGAATGATGAAGTACTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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CDS-3UTR TCA 90 bp | TCTTTAATCCATGCTACTAGAAGATCTTCTCTAAGTCTTAGAATGGGTCAGGATTCATTGGAATCATGTTaGCAAAAGCAAAGCAGATTG | + |
Preference number: 4 (lower is better) Translates to: SLIHATRRSSLSLRMGQDSLESC*QKQSRL Trigger: CAATCTGCTTTGCTTTTGTCAACATGATTCCAATGA...ATCCTGACCCATTCTAAGACTTAGAGAAGATCTTCTAGTAGCATGGATTAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR GCA 90 bp | GCCAGTAAGAGAAATTTGCTGAAAGATTACCTTGCTACCTTACAATTGGTTAATGGCTATGATTTTGAATaGCAGAACTACAGTAATCGT | + |
Preference number: 4 (lower is better) Translates to: ASKRNLLKDYLATLQLVNGYDFE*QNYSNR Trigger: ACGATTACTGTAGTTCTGGCATTCAAAATCATAGCC...ATTAACCAATTGTAAGGTAGCAAGGTAATCTTTCAGCAAATTTCTCTTACTGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS-3UTR GCA 90 bp | TATAAACTTCATGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGATGATGATCTGTCCATaGTCAGATTGTCCATCAATA | + |
Preference number: 4 (lower is better) Translates to: YKLHVGLGWNFVPSKVYVMMICP*SDCPSI Trigger: TATTGATGGACAATCTGAGCATGGACAGATCATCAT...CACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACATGAAGTTTATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS-3UTR CCA 90 bp | TATAAACTTCATGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGCCAGATATCTCACTATaGTGTTGTCCAAAAGCAAAA | + |
Preference number: 4 (lower is better) Translates to: YKLHVGLGWNFVPSKVYVPDISL*CCPKAK Trigger: TTTTGCTTTTGGACAACACCATAGTGAGATATCTGG...CACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACATGAAGTTTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR CCA 90 bp | TTAGAATGGGTCAGGATTCTATTATCTCTTTCTGTCCAAAGGGAAAAGTGTTTTGCACATACAATAACTTaGATGAGAATACAAACGGGA | + |
Preference number: 4 (lower is better) Translates to: LEWVRILLSLSVQREKCFAHTIT*MRIQTG Trigger: TCCCGTTTGTATTCTCATCCAAGTTATTGTATGTGC...AAAACACTTTTCCCTTTGGACAGAAAGAGATAATAGAATCCTGACCCATTCTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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3UTR CAA 72 bp | TGTAACTACAAATTTCTGTCTGCCAGTAAGAGAAATTaGCTGAAAGATTACCTTGCTACCTTACAATTGGTT | + |
Preference number: 4 (lower is better) Translates to: CNYKFLSASKRN*LKDYLATLQLV Trigger: AACCAATTGTAAGGTAGCAAGGTAATCTTTCAGCAAATTTCTCTTACTGGCAGACAGAAATTTGTAGTTACA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR GCA 90 bp | TATAAACTTCATGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGCAACAATTTTACGAATaGAGTGATTCTGTTCTGTGT | + |
Preference number: 4 (lower is better) Translates to: YKLHVGLGWNFVPSKVYVQQFYE*SDSVLC Trigger: ACACAGAACAGAATCACTGCATTCGTAAAATTGTTG...CACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACATGAAGTTTATA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR CAA 90 bp | GTTTGCTGTCCCAGGTATGGGCATACTGGGTGGCTGGGAATGGGAAGCAGCCTTTCTTTCCCATTGTCCTaGGGCAGATTATCAAACTTT | + |
Preference number: 5 (lower is better) Translates to: VCCPRYGHTGWLGMGSSLSFPLS*GRLSNF Trigger: AAAGTTTGATAATCTGCCCAAGGACAATGGGAAAGA...AAGGCTGCTTCCCATTCCCAGCCACCCAGTATGCCCATACCTGGGACAGCAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR CAA 90 bp | CTGTTATTGGCCTTAACAACTGGAGTACTGTGGTGCTTCACAATGACCCCAAGACTGCAGTTTGTCTCTTaGGTTCATATTCACTCTGTC | + |
Preference number: 5 (lower is better) Translates to: LLLALTTGVLWCFTMTPRLQFVS*VHIHSV Trigger: GACAGAGTGAATATGAACCAAAGAGACAAACTGCAG...TCTTGGGGTCATTGTGAAGCACCACAGTACTCCAGTTGTTAAGGCCAATAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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CDS-3UTR CAA 90 bp | GCCAGTAAGAGAAATTTGCTGAAAGATTACCTTGCTACCTTACAATTGGTTAATCACTGCACACTGAAGTaGGCATCTGTGCACTTCCTT | + |
Preference number: 5 (lower is better) Translates to: ASKRNLLKDYLATLQLVNHCTLK*ASVHFL Trigger: AAGGAAGTGCACAGATGCCAACTTCAGTGTGCAGTG...ATTAACCAATTGTAAGGTAGCAAGGTAATCTTTCAGCAAATTTCTCTTACTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS-3UTR CAA 90 bp | TGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGTGTGTGTATACTGGGAGGCTATGATTTaGAATGCCAGAACTACAGTA | + |
Preference number: 5 (lower is better) Translates to: CRIRLELCAFQSICVCVYWEAMI*NARTTV Trigger: TACTGTAGTTCTGGCATTCAAAATCATAGCCTCCCA...GTATACACACACACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS-3UTR CAA 90 bp | GTTTGGCTTAAGCCATCAAACCTGCAAGTATTATGTGTTTGTCTGTCTCTCTGTCAAATAGGAGAGAAATaGGATACCTTGATCATTGTC | + |
Preference number: 5 (lower is better) Translates to: VWLKPSNLQVLCVCLSLCQIGEK*DTLIIV Trigger: GACAATGATCAAGGTATCCAATTTCTCTCCTATTTG...ACAGAGAGACAGACAAACACATAATACTTGCAGGTTTGATGGCTTAAGCCAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR CAA 90 bp | CATGCTACTAGAAGATCTTCTCTAAGTCTTAGAATGGGTCAGGATTCTATTATCTATCTCACTATGGTGTaGTCCAAAAGCAAAAGTCCC | + |
Preference number: 5 (lower is better) Translates to: HATRRSSLSLRMGQDSIIYLTMV*SKSKSP Trigger: GGGACTTTTGCTTTTGGACAACACCATAGTGAGATA...GATAATAGAATCCTGACCCATTCTAAGACTTAGAGAAGATCTTCTAGTAGCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR CAA 90 bp | TCCTCTTTAATCCATGCTACTAGAAGATCTTCTCTAAGTCTTAGAATGGGTCAGTCTTTCCCATTGTCCTaGGGCAGATTATCAAACTTT | + |
Preference number: 5 (lower is better) Translates to: SSLIHATRRSSLSLRMGQSFPLS*GRLSNF Trigger: AAAGTTTGATAATCTGCCCAAGGACAATGGGAAAGA...CTGACCCATTCTAAGACTTAGAGAAGATCTTCTAGTAGCATGGATTAAAGAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR CAA 90 bp | GAATGGGTCAGGATTCTATTATCTCTTTCTGTCCAAAGGGAAAAGTGTTTTAGACTGCAGTTTGTCTCTTaGGTTCATATTCACTCTGTC | + |
Preference number: 5 (lower is better) Translates to: EWVRILLSLSVQREKCFRLQFVS*VHIHSV Trigger: GACAGAGTGAATATGAACCAAAGAGACAAACTGCAG...TCTAAAACACTTTTCCCTTTGGACAGAAAGAGATAATAGAATCCTGACCCATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR CAA 90 bp | CATGCTACTAGAAGATCTTCTCTAAGTCTTAGAATGGGTCAGGATTCTATTATCTCTGTGCACTTCCTTTaGCCCACTCTATCATATCTT | + |
Preference number: 5 (lower is better) Translates to: HATRRSSLSLRMGQDSIISVHFL*PTLSYL Trigger: AAGATATGATAGAGTGGGCAAAAGGAAGTGCACAGA...GATAATAGAATCCTGACCCATTCTAAGACTTAGAGAAGATCTTCTAGTAGCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS TCA 90 bp | ACATTTGTCTCGTTAGAAATTTCATTTTCAGGACAAGGTTTGCAATaGAAACAGCATGCTGCCATTCCGTCCATCCTGAATTTTCTAGAT | + |
Preference number: 5 (lower is better) Translates to: TFVSLEISFSGQGLQ*KQHAAIPSILNFLD Trigger: ATCTAGAAAATTCAGGATGGACGGAATGGCAGCATGCTGTTTTCATTGCAAACCTTGTCCTGAAAATGAAATTTCTAACGAGACAAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS-3UTR CAA 90 bp | TTAGAATGGGTCAGGATTCTATTATCTCTTTCTGTCCAAAGGGAAAAGTGTTTTTTGTGTTCTTTCCCATaGTCCTTGGGCAGATTATCA | + |
Preference number: 5 (lower is better) Translates to: LEWVRILLSLSVQREKCFLCSFP*SLGRLS Trigger: TGATAATCTGCCCAAGGACAATGGGAAAGAACACAA...AAAACACTTTTCCCTTTGGACAGAAAGAGATAATAGAATCCTGACCCATTCTAA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR CAA 90 bp | GCCAGTAAGAGAAATTTGCTGAAAGATTACCTTGCTACCTTACAATTGGTTAATTCTGTGCACTTCCTTTaGCCCACTCTATCATATCTT | + |
Preference number: 5 (lower is better) Translates to: ASKRNLLKDYLATLQLVNSVHFL*PTLSYL Trigger: AAGATATGATAGAGTGGGCAAAAGGAAGTGCACAGA...ATTAACCAATTGTAAGGTAGCAAGGTAATCTTTCAGCAAATTTCTCTTACTGGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR CAA 90 bp | CATGCTACTAGAAGATCTTCTCTAAGTCTTAGAATGGGTCAGGATTCTATTATCGATTCCCAGACACAATaGTGTACTGAGAATTCAAAT | + |
Preference number: 5 (lower is better) Translates to: HATRRSSLSLRMGQDSIIDSQTQ*CTENSN Trigger: ATTTGAATTCTCAGTACACAATTGTGTCTGGGAATC...GATAATAGAATCCTGACCCATTCTAAGACTTAGAGAAGATCTTCTAGTAGCATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR CAA 90 bp | TTAGAATGGGTCAGGATTCTATTATCTCTTTCTGTCCAAAGGGAAAAGTGTTTTTGCACATACAATAACTaGGATGAGAATACAAACGGG | + |
Preference number: 5 (lower is better) Translates to: LEWVRILLSLSVQREKCFCTYNN*DENTNG Trigger: CCCGTTTGTATTCTCATCCAAGTTATTGTATGTGCA...AAAACACTTTTCCCTTTGGACAGAAAGAGATAATAGAATCCTGACCCATTCTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS-3UTR CAA 90 bp | TTAGAATGGGTCAGGATTCTATTATCTCTTTCTGTCCAAAGGGAAAAGTGTTTTGATTCCCAGACACAATaGTGTACTGAGAATTCAAAT | + |
Preference number: 5 (lower is better) Translates to: LEWVRILLSLSVQREKCFDSQTQ*CTENSN Trigger: ATTTGAATTCTCAGTACACAATTGTGTCTGGGAATC...AAAACACTTTTCCCTTTGGACAGAAAGAGATAATAGAATCCTGACCCATTCTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR CAA 90 bp | TATAAACTTCATGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGCAAATAGGAGAGAAATaGGATACCTTGATCATTGTC | + |
Preference number: 5 (lower is better) Translates to: YKLHVGLGWNFVPSKVYVQIGEK*DTLIIV Trigger: GACAATGATCAAGGTATCCAATTTCTCTCCTATTTG...CACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACATGAAGTTTATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS-3UTR CAA 90 bp | TATAAACTTCATGTAGGATTAGGTTGGAACTTTGTGCCTTCCAAAGTATATGTGGTACTTCATCATTCTTaGGGAGGCTATGATTTTGAA | + |
Preference number: 5 (lower is better) Translates to: YKLHVGLGWNFVPSKVYVVLHHS*GGYDFE Trigger: TTCAAAATCATAGCCTCCCAAAGAATGATGAAGTAC...CACATATACTTTGGAAGGCACAAAGTTCCAACCTAATCCTACATGAAGTTTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS TCA 72 bp | ACTCTTTCTCCACAGGCCGTTGTACTGCATGAATCATaGAGGTACATCCTGTTCCCTGGTTTCTGTCCCTGT | + |
Preference number: 6 (lower is better) Translates to: TLSPQAVVLHES*RYILFPGFCPC Trigger: ACAGGGACAGAAACCAGGGAACAGGATGTACCTTCATGATTCATGCAGTACAACGGCCTGTGGAGAAAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS TCA 72 bp | TCTGAGATGACCAACCCTACCCAGTTCCAACCGAAATaGATTATGAAGGATACCAGGCCAAAGGCTAGAGAT | + |
Preference number: 6 (lower is better) Translates to: SEMTNPTQFQPK*IMKDTRPKARD Trigger: ATCTCTAGCCTTTGGCCTGGTATCCTTCATAATTCATTTCGGTTGGAACTGGGTAGGGTTGGTCATCTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS TCA 72 bp | CTAAAATACTCTTTCTCCACAGGCCGTTGTACTGCATaGATCATGAAGGTACATCCTGTTCCCTGGTTTCTG | + |
Preference number: 6 (lower is better) Translates to: LKYSFSTGRCTA*IMKVHPVPWFL Trigger: CAGAAACCAGGGAACAGGATGTACCTTCATGATTCATGCAGTACAACGGCCTGTGGAGAAAGAGTATTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS CAA 90 bp | CACAATCAGCACTGCACACTGAAGTTGGCATCTGTGCACTTCCTTTaGCCCACTCTATCATATCTTCAGATAAATGTACCTGTTGACCAT | + |
Preference number: 6 (lower is better) Translates to: HNQHCTLKLASVHFL*PTLSYLQINVPVDH Trigger: ATGGTCAACAGGTACATTTATCTGAAGATATGATAGAGTGGGCAAAAGGAAGTGCACAGATGCCAACTTCAGTGTGCAGTGCTGATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS TCA 72 bp | CAAATAGGAGAGAAATTGGATACCTTGATCATTGTCTaGGATGACCAACCCTACCCAGTTCCAACCGAAATG | + |
Preference number: 6 (lower is better) Translates to: QIGEKLDTLIIV*DDQPYPVPTEM Trigger: CATTTCGGTTGGAACTGGGTAGGGTTGGTCATCTCAGACAATGATCAAGGTATCCAATTTCTCTCCTATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS CAA 72 bp | CACTGCACACTGAAGTTGGCATCTGTGCACTTCCTTTaGCCCACTCTATCATATCTTCAGATAAATGTACCT | + |
Preference number: 6 (lower is better) Translates to: HCTLKLASVHFL*PTLSYLQINVP Trigger: AGGTACATTTATCTGAAGATATGATAGAGTGGGCAAAAGGAAGTGCACAGATGCCAACTTCAGTGTGCAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS CCA 72 bp | AAAGTGCATCCATTCCAGCTTTACCAGATACTCATCTaGGCATTTGACAGAGTTCAATGTCTGGACAAAATG | + |
Preference number: 6 (lower is better) Translates to: KVHPFQLYQILI*AFDRVQCLDKM Trigger: CATTTTGTCCAGACATTGAACTCTGTCAAATGCCCAGATGAGTATCTGGTAAAGCTGGAATGGATGCACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS CAA 72 bp | TTCTTTCCCATTGTCCTTGGGCAGATTATCAAACTTTaGAAAAGTTATCTGATGGAGTGCGTGGGCAAAAGC | + |
Preference number: 6 (lower is better) Translates to: FFPIVLGQIIKL*KSYLMECVGKS Trigger: GCTTTTGCCCACGCACTCCATCAGATAACTTTTCAAAAGTTTGATAATCTGCCCAAGGACAATGGGAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS CAA 72 bp | TTTACGAATGCAGTGATTCTGTTCTGTGTTAGCATATaGGTCCTCCAGACACTGGACACAATAATCCACATC | + |
Preference number: 6 (lower is better) Translates to: FTNAVILFCVSI*VLQTLDTIIHI Trigger: GATGTGGATTATTGTGTCCAGTGTCTGGAGGACCAATATGCTAACACAGAACAGAATCACTGCATTCGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234796.2 |
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CDS TCA 72 bp | TCGTTAGAAATTTCATTTTCAGGACAAGGTTTGCAATaGAAACAGCATGCTGCCATTCCGTCCATCCTGAAT | + |
Preference number: 6 (lower is better) Translates to: SLEISFSGQGLQ*KQHAAIPSILN Trigger: ATTCAGGATGGACGGAATGGCAGCATGCTGTTTTCATTGCAAACCTTGTCCTGAAAATGAAATTTCTAACGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168175.3 |
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CDS GCA 72 bp | CACAGTTGTTGCCCAATTCAGGCTTGTAAGCGCCATTaGACATTTGGTGTATTCTTTACACAAATAATTAGG | + |
Preference number: 6 (lower is better) Translates to: HSCCPIQACKRH*TFGVFFTQIIR Trigger: CCTAATTATTTGTGTAAAGAATACACCAAATGTGCAATGGCGCTTACAAGCCTGAATTGGGCAACAACTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS CAA 90 bp | ATAATTGTGTTCTTTCCCATTGTCCTTGGGCAGATTATCAAACTTTaGAAAAGTTATCTGATGGAGTGCGTGGGCAAAAGCATAAACAGC | + |
Preference number: 6 (lower is better) Translates to: IIVFFPIVLGQIIKL*KSYLMECVGKSINS Trigger: GCTGTTTATGCTTTTGCCCACGCACTCCATCAGATAACTTTTCAAAAGTTTGATAATCTGCCCAAGGACAATGGGAAAGAACACAATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS CAA 90 bp | ATTCCAAATGTAGAAAATGTCATACTCTTCCTGCAGTTTGTCTCTTaGGTTCATATTCACTCTGTCCCCAACAGGATTAATGAACTGGGT | + |
Preference number: 6 (lower is better) Translates to: IPNVENVILFLQFVS*VHIHSVPNRINELG Trigger: ACCCAGTTCATTAATCCTGTTGGGGACAGAGTGAATATGAACCAAAGAGACAAACTGCAGGAAGAGTATGACATTTTCTACATTTGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS CCA 72 bp | AGATACTCATCTGGGCATTTGACAGAGTTCAATGTCTaGACAAAATGTTTAAACCCAGATATCTCACTATGG | + |
Preference number: 6 (lower is better) Translates to: RYSSGHLTEFNV*TKCLNPDISLW Trigger: CCATAGTGAGATATCTGGGTTTAAACATTTTGTCCAGACATTGAACTCTGTCAAATGCCCAGATGAGTATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS CAA 72 bp | ATCCATTCCAGCTTTACCAGATACTCATCTGGGCATTaGACAGAGTTCAATGTCTGGACAAAATGTTTAAAC | + |
Preference number: 6 (lower is better) Translates to: IHSSFTRYSSGH*TEFNVWTKCLN Trigger: GTTTAAACATTTTGTCCAGACATTGAACTCTGTCAAATGCCCAGATGAGTATCTGGTAAAGCTGGAATGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |
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CDS CAA 72 bp | ATTAGAGACATATTTGGCAAAATATCAGGGTTCATGTaGATTTCATATATGGAAAAAGCCAAAGCCAGAGCA | + |
Preference number: 6 (lower is better) Translates to: IRDIFGKISGFM*ISYMEKAKARA Trigger: TGCTCTGGCTTTGGCTTTTTCCATATATGAAATCAACATGAACCCTGATATTTTGCCAAATATGTCTCTAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168175.3 ENSMUST00000234796.2 |