Pregenerated sensors for VMN2R11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091450Ensembl transcript IDs: ENSMUST00000164875.3, ENSMUST00000233971.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTGTCAGCAAGCTCCTGTTGTCATCCTCAATCGTGTCGGTGTTTaGTGGTTGCTTATGGGATGGATCCCCAGGTGGGGTAGTCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: GCQQAPVVILNRVGV*WLLMGWIPRWGSLW Trigger: CCAGAGACTACCCCACCTGGGGATCCATCCCATAAGCAACCACCAAACACCGACACGATTGAGGATGACAACAGGAGCTTGCTGACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR GCA 90 bp | TTCCTAGTTTCCCTTCTGAAAACACCCTATCCCCTCACTCGCACCTaGTCACCAACCCACCCATTCCTACTTCCTACTCCTGCCATTCCC | + |
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Preference number: 1 (lower is better) Translates to: FLVSLLKTPYPLTRT*SPTHPFLLPTPAIP Trigger: GGGAATGGCAGGAGTAGGAAGTAGGAATGGGTGGGTTGGTGAGCAGGTGCGAGTGAGGGGATAGGGTGTTTTCAGAAGGGAAACTAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR GCA 90 bp | TTCAGCTCCTTGAGTACTTCTCTAGCTCCTTCATTGGGGACCCTGTaGTCCGTCCAATTGATGGCTGTGAGAATCCACTTCTGTATTTGT | + |
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Preference number: 1 (lower is better) Translates to: FSSLSTSLAPSLGTL*SVQLMAVRIHFCIC Trigger: ACAAATACAGAAGTGGATTCTCACAGCCATCAATTGGACGGAGCACAGGGTCCCCAATGAAGGAGCTAGAGAAGTACTCAAGGAGCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR CCA 90 bp | GATTCCCTATTGTGGAAAGCCGCAATAACATTTACCATCTTAAGATaGCGCTGGCTCCACAGTGCCTTGTGCCACCTAAACAAAGAACAA | + |
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Preference number: 1 (lower is better) Translates to: DSLLWKAAITFTILR*RWLHSALCHLNKEQ Trigger: TTGTTCTTTGTTTAGGTGGCACAAGGCACTGTGGAGCCAGCGCCATCTTAAGATGGTAAATGTTATTGCGGCTTTCCACAATAGGGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR CCA 90 bp | CCAGGAATGACACAGCTCTTTGAAGGCAGTGGGTTTTCTCTAAGTTaGCATACTTATCATCTGGACACCTCACACACTGTTCCATATCTG | + |
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Preference number: 1 (lower is better) Translates to: PGMTQLFEGSGFSLS*HTYHLDTSHTVPYL Trigger: CAGATATGGAACAGTGTGTGAGGTGTCCAGATGATAAGTATGCCAACTTAGAGAAAACCCACTGCCTTCAAAGAGCTGTGTCATTCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
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| 3UTR TCA 90 bp | TCAGTAGAAAAATCCGTCTTACCCACCTGTTATCAATGTGTCACTTaGCGTCTTCAATTATACATTTCTCCTCTCGCTCTCCAGCATGGA | + |
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Preference number: 1 (lower is better) Translates to: SVEKSVLPTCYQCVT*RLQLYISPLALQHG Trigger: TCCATGCTGGAGAGCGAGAGGAGAAATGTATAATTGAAGACGTCAAGTGACACATTGATAACAGGTGGGTAAGACGGATTTTTCTACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR GCA 90 bp | ATATGCATATCCCTCTCATTGTGGGAAGATCTCTTTCTTCCCAAGTaGACATTCCAAACTGTATGGTATGAAGTTAATGGATATTCACAT | + |
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Preference number: 1 (lower is better) Translates to: ICISLSLWEDLFLPK*TFQTVWYEVNGYSH Trigger: ATGTGAATATCCATTAACTTCATACCATACAGTTTGGAATGTGCACTTGGGAAGAAAGAGATCTTCCCACAATGAGAGGGATATGCATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTTCACAGGATCAAGGGCTTCTCCTATTGATGACCAACTAGGCCATCCTCTGGCGCTGGCTCCACAGTaGCTTGTGCCACCTAAACAA | + |
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Preference number: 2 (lower is better) Translates to: AFTGSRASPIDDQLGHPLALAPQ*LVPPKQ Trigger: TTGTTTAGGTGGCACAAGGCACTGTGGAGCCAGCGC...CAGAGGATGGCCTAGTTGGTCATCAATAGGAGAAGCCCTTGATCCTGTGAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR CCA 90 bp | CCTATCCCCTCACTCGCACCTGCTCACCAACCCACCCATTCCTACTTCCTACTCAATCGTGTCGGTGTTTaGTGGTTGCTTATGGGATGG | + |
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Preference number: 2 (lower is better) Translates to: PIPSLAPAHQPTHSYFLLNRVGV*WLLMGW Trigger: CCATCCCATAAGCAACCACCAAACACCGACACGATT...GAGTAGGAAGTAGGAATGGGTGGGTTGGTGAGCAGGTGCGAGTGAGGGGATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR CAA 90 bp | CCTGTGCTCCGTCCAATTGATGGCTGTGAGAATCCACTTCTGTATTaGTCAGGCACTGGAAGAACCTCTCCGGAGTCAGCTATATCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PVLRPIDGCENPLLY*SGTGRTSPESAISG Trigger: GCCTGATATAGCTGACTCCGGAGAGGTTCTTCCAGTGCCTGACAAATACAGAAGTGGATTCTCACAGCCATCAATTGGACGGAGCACAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTTCACAGGATCAAGGGCTTCTCCTATTGATGACCAACTAGGCCATCCTCTGCGTGTCGGTGTTTGGTaGTTGCTTATGGGATGGATC | + |
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Preference number: 2 (lower is better) Translates to: AFTGSRASPIDDQLGHPLRVGVW*LLMGWI Trigger: GATCCATCCCATAAGCAACCACCAAACACCGACACG...CAGAGGATGGCCTAGTTGGTCATCAATAGGAGAAGCCCTTGATCCTGTGAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR CAA 90 bp | TCATATTGTTGTTCCTCCTATGGGGATGAAACCTCCTTCAGCTCCTaGAGTACTTCTCTAGCTCCTTCATTGGGGACCCTGTGCTCCGTC | + |
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Preference number: 2 (lower is better) Translates to: SYCCSSYGDETSFSS*STSLAPSLGTLCSV Trigger: GACGGAGCACAGGGTCCCCAATGAAGGAGCTAGAGAAGTACTCAAGGAGCTGAAGGAGGTTTCATCCCCATAGGAGGAACAACAATATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCGTCCAATTGATGGCTGTGAGAATCCACTTCTGTATTTGTCAGGCACTGGATTTGGTGGTTGCTTATaGGATGGATCCCCAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: LRPIDGCENPLLYLSGTGFGGCL*DGSPGG Trigger: CCCACCTGGGGATCCATCCCATAAGCAACCACCAAA...TCCAGTGCCTGACAAATACAGAAGTGGATTCTCACAGCCATCAATTGGACGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR CCA 90 bp | CTTAAGATGGCGCTGGCTCCACAGTGCCTTGTGCCACCTAAACAAAGAACAAGCAACCACGGAAGAATCTaGCGTCCTGTGTCTGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: LKMALAPQCLVPPKQRTSNHGRI*RPVSVS Trigger: AGAAACAGACACAGGACGCCAGATTCTTCCGTGGTT...GCTTGTTCTTTGTTTAGGTGGCACAAGGCACTGTGGAGCCAGCGCCATCTTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR CAA 90 bp | AGTACTTCTCTAGCTCCTTCATTGGGGACCCTGTGCTCCGTCCAATaGATGGCTGTGAGAATCCACTTCTGTATTTGTCAGGCACTGGAA | + |
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Preference number: 2 (lower is better) Translates to: STSLAPSLGTLCSVQ*MAVRIHFCICQALE Trigger: TTCCAGTGCCTGACAAATACAGAAGTGGATTCTCACAGCCATCAATTGGACGGAGCACAGGGTCCCCAATGAAGGAGCTAGAGAAGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR CAA 90 bp | CCTGATGCCAGCATCCCTCTCATCCTTCTCCCTGGAGTAGTGAGCTaGAAAGCCATGAGCACAGTTATTGTTTTAGCCAACACTGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: PDASIPLILLPGVVS*KAMSTVIVLANTVE Trigger: TTCTACAGTGTTGGCTAAAACAATAACTGTGCTCATGGCTTTCAAGCTCACTACTCCAGGGAGAAGGATGAGAGGGATGCTGGCATCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTACAGTCCTCTTTCTTATAACTCCCAGAACAATTTGCCTAGAGGTGGCACTCTAGTACTAGAACTGTaGGGGCAGAGAGGAACAGGG | + |
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Preference number: 2 (lower is better) Translates to: LYSPLSYNSQNNLPRGGTLVLEL*GQRGTG Trigger: CCCTGTTCCTCTCTGCCCTCACAGTTCTAGTACTAG...AGTGCCACCTCTAGGCAAATTGTTCTGGGAGTTATAAGAAAGAGGACTGTAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
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| 3UTR-3UTR GCA 90 bp | CTTAAGATGGCGCTGGCTCCACAGTGCCTTGTGCCACCTAAACAAAGAACAAGCCTCTTTCTTCCCAAGTaGACATTCCAAACTGTATGG | + |
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Preference number: 2 (lower is better) Translates to: LKMALAPQCLVPPKQRTSLFLPK*TFQTVW Trigger: CCATACAGTTTGGAATGTGCACTTGGGAAGAAAGAG...GCTTGTTCTTTGTTTAGGTGGCACAAGGCACTGTGGAGCCAGCGCCATCTTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTTCACAGGATCAAGGGCTTCTCCTATTGATGACCAACTAGGCCATCCTCTGGATACAGACACTCAATaGGAGCACATAGAAAAATGC | + |
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Preference number: 2 (lower is better) Translates to: AFTGSRASPIDDQLGHPLDTDTQ*EHIEKC Trigger: GCATTTTTCTATGTGCTCTCATTGAGTGTCTGTATC...CAGAGGATGGCCTAGTTGGTCATCAATAGGAGAAGCCCTTGATCCTGTGAAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR GCA 90 bp | GCGTATTTTAGGAGTGTATGGAGGTGCTATAACTGGTGTTCTGGACACAGGAAATCGGTGTTTGGTGGTTaGTTATGGGATGGATCCCCA | + |
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Preference number: 2 (lower is better) Translates to: AYFRSVWRCYNWCSGHRKSVFGG*LWDGSP Trigger: TGGGGATCCATCCCATAAGCAACCACCAAACACCGA...TTTCCTGTGTCCAGAACACCAGTTATAGCACCTCCATACACTCCTAAAATACGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCTTCTGCGATGGCCATCAACAATATGCAACACTGTCAGTATGCTCCACACTGTCTGGGCATTCAGTTaGAGGAAACAGTTCAATGTA | + |
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Preference number: 2 (lower is better) Translates to: GLLRWPSTICNTVSMLHTVWAFS*RKQFNV Trigger: TACATTGAACTGTTTCCTCCAACTGAATGCCCAGAC...AGTGTGGAGCATACTGACAGTGTTGCATATTGTTGATGGCCATCGCAGAAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR GCA 90 bp | CAACACTGTAGAAATAGCCACTGTGAAAAATACTCCAAATGTGGTCTGCTGCAGTCGGTGTTTGGTGGTTaGTTATGGGATGGATCCCCA | + |
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Preference number: 2 (lower is better) Translates to: QHCRNSHCEKYSKCGLLQSVFGG*LWDGSP Trigger: TGGGGATCCATCCCATAAGCAACCACCAAACACCGA...CTGCAGCAGACCACATTTGGAGTATTTTTCACAGTGGCTATTTCTACAGTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGTTATCAATGTGTCACTTGACGTCTTCAATTATACATTTCTCCTCTCGCTCTTTGGTGGTTGCTTATaGGATGGATCCCCAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: PVINVSLDVFNYTFLLSLFGGCL*DGSPGG Trigger: CCCACCTGGGGATCCATCCCATAAGCAACCACCAAA...GAGCGAGAGGAGAAATGTATAATTGAAGACGTCAAGTGACACATTGATAACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCTTCTGCGATGGCCATCAACAATATGCAACACTGTCAGTATGCTCCACACTTGCAGCAAACTCAAATaGACCAGATTAAAATACCAG | + |
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Preference number: 2 (lower is better) Translates to: GLLRWPSTICNTVSMLHTCSKLK*TRLKYQ Trigger: CTGGTATTTTAATCTGGTTCATTTGAGTTTGCTGCA...AGTGTGGAGCATACTGACAGTGTTGCATATTGTTGATGGCCATCGCAGAAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR GCA 90 bp | TATTGTTGTTCCTCCTATGGGGATGAAACCTCCTTCAGCTCCTTGAGTACTTCTCATGCCTTCAGTCTCTaGTTCACACTATGTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: YCCSSYGDETSFSSLSTSHAFSL*FTLCLC Trigger: ACAGAGACATAGTGTGAAGCAGAGACTGAAGGCATG...AGAAGTACTCAAGGAGCTGAAGGAGGTTTCATCCCCATAGGAGGAACAACAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR CAA 90 bp | GTCAGTAGAAAAATCCGTCTTACCCACCTGTTATCAATGTGTCACTaGACGTCTTCAATTATACATTTCTCCTCTCGCTCTCCAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: VSRKIRLTHLLSMCH*TSSIIHFSSRSPAW Trigger: CCATGCTGGAGAGCGAGAGGAGAAATGTATAATTGAAGACGTCAAGTGACACATTGATAACAGGTGGGTAAGACGGATTTTTCTACTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAATGGAGGATGTTGTCATAGCCAGGGAAGGGAACAAATATTGGCCAGTTCACACATAGAAAAATGCTaGTTACTGGCTTCATGTCCA | + |
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Preference number: 2 (lower is better) Translates to: RNGGCCHSQGREQILASSHIEKC*LLASCP Trigger: TGGACATGAAGCCAGTAATCAGCATTTTTCTATGTG...TGAACTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACATCCTCCATTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTCCTCAAAAATGTCAGTAGAAAAATCCGTCTTACCCACCTGTTATCAATGTAGTCCCAGGGAGCCCTaGGGGTTCATATTGTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: CSSKMSVEKSVLPTCYQCSPREP*GFILLF Trigger: GAACAACAATATGAACCCCCAGGGCTCCCTGGGACT...ACATTGATAACAGGTGGGTAAGACGGATTTTTCTACTGACATTTTTGAGGAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTCCTCAAAAATGTCAGTAGAAAAATCCGTCTTACCCACCTGTTATCAATGTTGTGTCTGTTTCTGCTaGCGGGAACAAGCTCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: CSSKMSVEKSVLPTCYQCCVCFC*REQAQD Trigger: ATCCTGAGCTTGTTCCCGCCAGCAGAAACAGACACA...ACATTGATAACAGGTGGGTAAGACGGATTTTTCTACTGACATTTTTGAGGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGTGTGTTTTCATATAAAGTTCAAGAGCTTTATACAGCAGGCACAGTTTGAAATCTTAAGATGGCGCTaGCTCCACAGTGCCTTGTGC | + |
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Preference number: 2 (lower is better) Translates to: MVCFHIKFKSFIQQAQFEILRWR*LHSALC Trigger: GCACAAGGCACTGTGGAGCCAGCGCCATCTTAAGAT...TTCAAACTGTGCCTGCTGTATAAAGCTCTTGAACTTTATATGAAAACACACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGTTATCAATGTGTCACTTGACGTCTTCAATTATACATTTCTCCTCTCGCTCTGGAGGTGCTATAACTaGTGTTCTGGACACAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: PVINVSLDVFNYTFLLSLWRCYN*CSGHRK Trigger: TTTCCTGTGTCCAGAACACCAGTTATAGCACCTCCA...GAGCGAGAGGAGAAATGTATAATTGAAGACGTCAAGTGACACATTGATAACAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAGAAATAGCCACTGTGAAAAATACTCCAAATGTGGTCTGCTGCAGGATACATGTCAGGGACTAATCTaGGTGATGGAGGGAAAGATT | + |
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Preference number: 2 (lower is better) Translates to: CRNSHCEKYSKCGLLQDTCQGLI*VMEGKI Trigger: AATCTTTCCCTCCATCACCCAGATTAGTCCCTGACA...TGTATCCTGCAGCAGACCACATTTGGAGTATTTTTCACAGTGGCTATTTCTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
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| 3UTR CAA 90 bp | GTAAGGAATGGAGGATGTTGTCATAGCCAGGGAAGGGAACAAATATaGGCCAGTTCATACCAAACAATAAGCCATCAGACCATAAATACA | + |
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Preference number: 2 (lower is better) Translates to: VRNGGCCHSQGREQI*ASSYQTISHQTINT Trigger: TGTATTTATGGTCTGATGGCTTATTGTTTGGTATGAACTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACATCCTCCATTCCTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTACAGTCCTCTTTCTTATAACTCCCAGAACAATTTGCCTAGAGGTGGCACTAGGTTTATGTACACATaGATGAGACCATTTTCCACT | + |
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Preference number: 2 (lower is better) Translates to: LYSPLSYNSQNNLPRGGTRFMYT*MRPFST Trigger: AGTGGAAAATGGTCTCATTCATGTGTACATAAACCT...AGTGCCACCTCTAGGCAAATTGTTCTGGGAGTTATAAGAAAGAGGACTGTAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTACAGTCCTCTTTCTTATAACTCCCAGAACAATTTGCCTAGAGGTGGCACTCCACAAAATATGATCTaGATAAGTATTACTGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: LYSPLSYNSQNNLPRGGTPQNMI*ISITAL Trigger: CAGGGCAGTAATACTTATTCAGATCATATTTTGTGG...AGTGCCACCTCTAGGCAAATTGTTCTGGGAGTTATAAGAAAGAGGACTGTAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTTACACACATACCTACAGGTCAAAGTGATGGTAGCTATTCATCAACTAAGAATGAGTCCCACGATGTaGTTTCTTTGGTTGGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: GLHTYLQVKVMVAIHQLRMSPTM*FLWLVV Trigger: AACTACCAACCAAAGAAAGCACATCGTGGGACTCAT...TCTTAGTTGATGAATAGCTACCATCACTTTGACCTGTAGGTATGTGTGTAAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGTTATCAATGTGTCACTTGACGTCTTCAATTATACATTTCTCCTCTCGCTCCTGAATAAGTATTACTaGCCTGGAAGCATGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: PVINVSLDVFNYTFLLSLLNKYY*PGSMEG Trigger: TCCTTCCATGCTTCCAGGGCAGTAATACTTATTCAG...GAGCGAGAGGAGAAATGTATAATTGAAGACGTCAAGTGACACATTGATAACAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTTCATTGAGTTTAGGAAATTTGATGTATTTAGACTCAGGCTGTGTGTCCTGAATCGTGTCGGTGTTTaGTGGTTGCTTATGGGATGG | + |
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Preference number: 2 (lower is better) Translates to: SFIEFRKFDVFRLRLCVLNRVGV*WLLMGW Trigger: CCATCCCATAAGCAACCACCAAACACCGACACGATT...CAGGACACACAGCCTGAGTCTAAATACATCAAATTTCCTAAACTCAATGAAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAATGGAGGATGTTGTCATAGCCAGGGAAGGGAACAAATATTGGCCAGTTCACTAAAGATTAGTAATTaGCATTACATTAGGCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: RNGGCCHSQGREQILASSLKISN*HYIRQC Trigger: GCACTGCCTAATGTAATGCCAATTACTAATCTTTAG...TGAACTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACATCCTCCATTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR CCA 90 bp | GCGTATTTTAGGAGTGTATGGAGGTGCTATAACTGGTGTTCTGGACACAGGAAAGAAGGGAACAAATATTaGCCAGTTCATACCAAACAA | + |
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Preference number: 2 (lower is better) Translates to: AYFRSVWRCYNWCSGHRKEGNKY*PVHTKQ Trigger: TTGTTTGGTATGAACTGGCCAATATTTGTTCCCTTC...TTTCCTGTGTCCAGAACACCAGTTATAGCACCTCCATACACTCCTAAAATACGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGTTATCAATGTGTCACTTGACGTCTTCAATTATACATTTCTCCTCTCGCTCATATCCCTCTCATTGTaGGAAGATCTCTTTCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: PVINVSLDVFNYTFLLSLISLSL*EDLFLP Trigger: GGGAAGAAAGAGATCTTCCCACAATGAGAGGGATAT...GAGCGAGAGGAGAAATGTATAATTGAAGACGTCAAGTGACACATTGATAACAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
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| 3UTR CAA 90 bp | ATTCTTGATGCTATATGCCTCATAGACATATGCATATCCCTCTCATaGTGGGAAGATCTCTTTCTTCCCAAGTGCACATTCCAAACTGTA | + |
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Preference number: 2 (lower is better) Translates to: ILDAICLIDICISLS*WEDLFLPKCTFQTV Trigger: TACAGTTTGGAATGTGCACTTGGGAAGAAAGAGATCTTCCCACAATGAGAGGGATATGCATATGTCTATGAGGCATATAGCATCAAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCTAACTAAGATAACACAACATTTTGGGAGAAAGATGCACCCTAGCAAGCCTCACATAGAAAAATGCTaGTTACTGGCTTCATGTCCA | + |
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Preference number: 2 (lower is better) Translates to: SLTKITQHFGRKMHPSKPHIEKC*LLASCP Trigger: TGGACATGAAGCCAGTAATCAGCATTTTTCTATGTG...AGGCTTGCTAGGGTGCATCTTTCTCCCAAAATGTTGTGTTATCTTAGTTAGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTTCATTGAGTTTAGGAAATTTGATGTATTTAGACTCAGGCTGTGTGTCCTGTGGAGGTGCTATAACTaGTGTTCTGGACACAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SFIEFRKFDVFRLRLCVLWRCYN*CSGHRK Trigger: TTTCCTGTGTCCAGAACACCAGTTATAGCACCTCCA...CAGGACACACAGCCTGAGTCTAAATACATCAAATTTCCTAAACTCAATGAAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR TCA 90 bp | GAACTTGGATACAGACACTCAATGAGAGCACATAGAAAAATGCTGATTACTGGCGGAAAGATTGTGTACTaGTCATGTAGTCTAGTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ELGYRHSMRAHRKMLITGGKIVY*SCSLVS Trigger: AGAAACTAGACTACATGATCAGTACACAATCTTTCC...GCCAGTAATCAGCATTTTTCTATGTGCTCTCATTGAGTGTCTGTATCCAAGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTGTTATCAATGTGTCACTTGACGTCTTCAATTATACATTTCTCCTCTCGCTCACATTGTTTTCTTTGTaGGTTGTGTCCTTTGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: PVINVSLDVFNYTFLLSLTLFSL*VVSFVC Trigger: ACAGACAAAGGACACAACTCACAAAGAAAACAATGT...GAGCGAGAGGAGAAATGTATAATTGAAGACGTCAAGTGACACATTGATAACAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTTTCATTGAGTTTAGGAAATTTGATGTATTTAGACTCAGGCTGTGTGTCCTGTGCCTCATAGACATATaGATATCCCTCTCATTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: SFIEFRKFDVFRLRLCVLCLIDI*ISLSLW Trigger: CCACAATGAGAGGGATATGCATATGTCTATGAGGCA...CAGGACACACAGCCTGAGTCTAAATACATCAAATTTCCTAAACTCAATGAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTTCCTCAAAAATGTCAGTAGAAAAATCCGTCTTACCCACCTGTTATCAATGTGTCTGGGCATTCAGTTaGAGGAAACAGTTCAATGTA | + |
|
Preference number: 2 (lower is better) Translates to: CSSKMSVEKSVLPTCYQCVWAFS*RKQFNV Trigger: TACATTGAACTGTTTCCTCCAACTGAATGCCCAGAC...ACATTGATAACAGGTGGGTAAGACGGATTTTTCTACTGACATTTTTGAGGAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTCATTGAGTTTAGGAAATTTGATGTATTTAGACTCAGGCTGTGTGTCCTGCTCTTGTTGCAGTCTTaGAATCTTCACTCTTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SFIEFRKFDVFRLRLCVLLLLQS*NLHSCS Trigger: AGAACAAGAGTGAAGATTTCAAGACTGCAACAAGAG...CAGGACACACAGCCTGAGTCTAAATACATCAAATTTCCTAAACTCAATGAAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTTCCTCAAAAATGTCAGTAGAAAAATCCGTCTTACCCACCTGTTATCAATGTGGAAGGAAGAAAACTTaGAAAGCTTCTAGCCTACAT | + |
|
Preference number: 2 (lower is better) Translates to: CSSKMSVEKSVLPTCYQCGRKKT*KASSLH Trigger: ATGTAGGCTAGAAGCTTTGCAAGTTTTCTTCCTTCC...ACATTGATAACAGGTGGGTAAGACGGATTTTTCTACTGACATTTTTGAGGAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTCTAACTAAGATAACACAACATTTTGGGAGAAAGATGCACCCTAGCAAGCCTCTAAAGATTAGTAATTaGCATTACATTAGGCAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: SLTKITQHFGRKMHPSKPLKISN*HYIRQC Trigger: GCACTGCCTAATGTAATGCCAATTACTAATCTTTAG...AGGCTTGCTAGGGTGCATCTTTCTCCCAAAATGTTGTGTTATCTTAGTTAGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTTCCTCAAAAATGTCAGTAGAAAAATCCGTCTTACCCACCTGTTATCAATGTAGGTTTATGTACACATaGATGAGACCATTTTCCACT | + |
|
Preference number: 2 (lower is better) Translates to: CSSKMSVEKSVLPTCYQCRFMYT*MRPFST Trigger: AGTGGAAAATGGTCTCATTCATGTGTACATAAACCT...ACATTGATAACAGGTGGGTAAGACGGATTTTTCTACTGACATTTTTGAGGAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTTCCTCAAAAATGTCAGTAGAAAAATCCGTCTTACCCACCTGTTATCAATGTCTCAGATTTTCTACTTaGGGAAATATGATAGCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: CSSKMSVEKSVLPTCYQCLRFST*GNMIAL Trigger: TAGGGCTATCATATTTCCTCAAGTAGAAAATCTGAG...ACATTGATAACAGGTGGGTAAGACGGATTTTTCTACTGACATTTTTGAGGAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTCATTGAGTTTAGGAAATTTGATGTATTTAGACTCAGGCTGTGTGTCCTGCTCAGATTTTCTACTTaGGGAAATATGATAGCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: SFIEFRKFDVFRLRLCVLLRFST*GNMIAL Trigger: TAGGGCTATCATATTTCCTCAAGTAGAAAATCTGAG...CAGGACACACAGCCTGAGTCTAAATACATCAAATTTCCTAAACTCAATGAAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGGTGTGTTTTCATATAAAGTTCAAGAGCTTTATACAGCAGGCACAGTTTGAATCACAGTTAATAGAATaGAGGCAAGACAAGAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: MVCFHIKFKSFIQQAQFESQLIE*RQDKNL Trigger: CAAGTTCTTGTCTTGCCTTCATTCTATTAACTGTGA...TTCAAACTGTGCCTGCTGTATAAAGCTCTTGAACTTTATATGAAAACACACCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGGTGTGTTTTCATATAAAGTTCAAGAGCTTTATACAGCAGGCACAGTTTGAAATTATGAAGCTATTATaGAATCTAGGGCTTCTGCGA | + |
|
Preference number: 2 (lower is better) Translates to: MVCFHIKFKSFIQQAQFEIMKLL*NLGLLR Trigger: TCGCAGAAGCCCTAGATTTCATAATAGCTTCATAAT...TTCAAACTGTGCCTGCTGTATAAAGCTCTTGAACTTTATATGAAAACACACCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCCCTCACTCGCACCTGCTCACCAACCCACCCATTCCTACTTCCTACTCCTGCGTCGGTGTTTGGTGGTaGCTTATGGGATGGATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SPHSHLLTNPPIPTSYSCVGVWW*LMGWIP Trigger: GGGGATCCATCCCATAAGCAACCACCAAACACCGAC...GCAGGAGTAGGAAGTAGGAATGGGTGGGTTGGTGAGCAGGTGCGAGTGAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR GCA 72 bp | CTGCTCACCAACCCACCCATTCCTACTTCCTACTCCTaGCATTCCCCCACACTGGGGCATAGAGCCTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: LLTNPPIPTSYS*HSPTLGHRAFT Trigger: TGTGAAGGCTCTATGCCCCAGTGTGGGGGAATGGCAGGAGTAGGAAGTAGGAATGGGTGGGTTGGTGAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAACACCCTATCCCCTCACTCGCACCTGCTCACCAACCCACCCATTCCTACTTGTCGGTGTTTGGTGGTaGCTTATGGGATGGATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: KTPYPLTRTCSPTHPFLLVGVWW*LMGWIP Trigger: GGGGATCCATCCCATAAGCAACCACCAAACACCGAC...AAGTAGGAATGGGTGGGTTGGTGAGCAGGTGCGAGTGAGGGGATAGGGTGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR GCA 72 bp | TCCCTTCTGAAAACACCCTATCCCCTCACTCGCACCTaGTCACCAACCCACCCATTCCTACTTCCTACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SLLKTPYPLTRT*SPTHPFLLPTP Trigger: AGGAGTAGGAAGTAGGAATGGGTGGGTTGGTGAGCAGGTGCGAGTGAGGGGATAGGGTGTTTTCAGAAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR CCA 72 bp | TCATCCTCAATCGTGTCGGTGTTTGGTGGTTGCTTATaGGATGGATCCCCAGGTGGGGTAGTCTCTGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: SSSIVSVFGGCL*DGSPGGVVSGW Trigger: CCATCCAGAGACTACCCCACCTGGGGATCCATCCCATAAGCAACCACCAAACACCGACACGATTGAGGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR CCA 72 bp | GCTCCTGTTGTCATCCTCAATCGTGTCGGTGTTTGGTaGTTGCTTATGGGATGGATCCCCAGGTGGGGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: APVVILNRVGVW*LLMGWIPRWGS Trigger: ACTACCCCACCTGGGGATCCATCCCATAAGCAACCACCAAACACCGACACGATTGAGGATGACAACAGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR GCA 72 bp | CTGTTGTCATCCTCAATCGTGTCGGTGTTTGGTGGTTaGTTATGGGATGGATCCCCAGGTGGGGTAGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLSSSIVSVFGG*LWDGSPGGVVS Trigger: AGAGACTACCCCACCTGGGGATCCATCCCATAAGCAACCACCAAACACCGACACGATTGAGGATGACAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR CCA 72 bp | CCACGGAAGAATCTGGCGTCCTGTGTCTGTTTCTGCTaGCGGGAACAAGCTCAGGATACCCTATTCTCAATG | + |
|
Preference number: 3 (lower is better) Translates to: PRKNLASCVCFC*REQAQDTLFSM Trigger: CATTGAGAATAGGGTATCCTGAGCTTGTTCCCGCCAGCAGAAACAGACACAGGACGCCAGATTCTTCCGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTCACAGGATCAAGGGCTTCTCCTATTGATGACCAACTAGGCCATCCTCTGCTGTGCTCCGTCCAATaGATGGCTGTGAGAATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: AFTGSRASPIDDQLGHPLLCSVQ*MAVRIH Trigger: GTGGATTCTCACAGCCATCAATTGGACGGAGCACAG...CAGAGGATGGCCTAGTTGGTCATCAATAGGAGAAGCCCTTGATCCTGTGAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAACACCCTATCCCCTCACTCGCACCTGCTCACCAACCCACCCATTCCTACTTACCTCCTTCAGCTCCTaGAGTACTTCTCTAGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KTPYPLTRTCSPTHPFLLTSFSS*STSLAP Trigger: AGGAGCTAGAGAAGTACTCAAGGAGCTGAAGGAGGT...AAGTAGGAATGGGTGGGTTGGTGAGCAGGTGCGAGTGAGGGGATAGGGTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTCACAGGATCAAGGGCTTCTCCTATTGATGACCAACTAGGCCATCCTCTGCAATCGTGTCGGTGTTaGGTGGTTGCTTATGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: AFTGSRASPIDDQLGHPLQSCRC*VVAYGM Trigger: CATCCCATAAGCAACCACCAAACACCGACACGATTG...CAGAGGATGGCCTAGTTGGTCATCAATAGGAGAAGCCCTTGATCCTGTGAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR CCA 72 bp | TTGCTTATGGGATGGATCCCCAGGTGGGGTAGTCTCTaGATGGTCATGCCTTCAGTCTCTGCTTCACACTAT | + |
|
Preference number: 3 (lower is better) Translates to: LLMGWIPRWGSL*MVMPSVSASHY Trigger: ATAGTGTGAAGCAGAGACTGAAGGCATGACCATCCAGAGACTACCCCACCTGGGGATCCATCCCATAAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR CCA 72 bp | ACTCCAAATGTGGTCTGCTGCAGGATACAGGTGGCCTaGTTGGGATGTCCAATGAAGAGCAATGAGCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TPNVVCCRIQVA*LGCPMKSNEQR Trigger: TCTCTGCTCATTGCTCTTCATTGGACATCCCAACCAGGCCACCTGTATCCTGCAGCAGACCACATTTGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| 3UTR TCA 72 bp | GCTGCAGGATACAGGTGGCCTGGTTGGGATGTCCAATaGAGAGCAATGAGCAGAGAAAACAGAAGACTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: AAGYRWPGWDVQ*RAMSRENRRLE Trigger: CTCTAGTCTTCTGTTTTCTCTGCTCATTGCTCTTCATTGGACATCCCAACCAGGCCACCTGTATCCTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| 3UTR GCA 72 bp | ACCATCTTAAGATGGCGCTGGCTCCACAGTGCCTTGTaGCACCTAAACAAAGAACAAGCTATATGCGCATGT | + |
|
Preference number: 3 (lower is better) Translates to: TILRWRWLHSAL*HLNKEQAICAC Trigger: ACATGCGCATATAGCTTGTTCTTTGTTTAGGTGGCACAAGGCACTGTGGAGCCAGCGCCATCTTAAGATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR GCA 72 bp | ATAGCCACTGTGAAAAATACTCCAAATGTGGTCTGCTaGAGGATACAGGTGGCCTGGTTGGGATGTCCAATG | + |
|
Preference number: 3 (lower is better) Translates to: IATVKNTPNVVC*RIQVAWLGCPM Trigger: CATTGGACATCCCAACCAGGCCACCTGTATCCTGCAGCAGACCACATTTGGAGTATTTTTCACAGTGGCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| 3UTR GCA 72 bp | GAAATAGCCACTGTGAAAAATACTCCAAATGTGGTCTaGTGCAGGATACAGGTGGCCTGGTTGGGATGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: EIATVKNTPNVV*CRIQVAWLGCP Trigger: TGGACATCCCAACCAGGCCACCTGTATCCTGCAGCAGACCACATTTGGAGTATTTTTCACAGTGGCTATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| 3UTR CCA 72 bp | TTGTGGAAAGCCGCAATAACATTTACCATCTTAAGATaGCGCTGGCTCCACAGTGCCTTGTGCCACCTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LWKAAITFTILR*RWLHSALCHLN Trigger: GTTTAGGTGGCACAAGGCACTGTGGAGCCAGCGCCATCTTAAGATGGTAAATGTTATTGCGGCTTTCCACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAATGGAGGATGTTGTCATAGCCAGGGAAGGGAACAAATATTGGCCAGTTCACAATCGTGTCGGTGTTaGGTGGTTGCTTATGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: RNGGCCHSQGREQILASSQSCRC*VVAYGM Trigger: CATCCCATAAGCAACCACCAAACACCGACACGATTG...TGAACTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACATCCTCCATTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAATGGAGGATGTTGTCATAGCCAGGGAAGGGAACAAATATTGGCCAGTTCAACCTCCTTCAGCTCCTaGAGTACTTCTCTAGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RNGGCCHSQGREQILASSTSFSS*STSLAP Trigger: AGGAGCTAGAGAAGTACTCAAGGAGCTGAAGGAGGT...TGAACTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACATCCTCCATTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGCTTCTGCGATGGCCATCAACAATATGCAACACTGTCAGTATGCTCCACACTTGTCTGGGCATTCAGTaGGAGGAAACAGTTCAATGT | + |
|
Preference number: 3 (lower is better) Translates to: GLLRWPSTICNTVSMLHTCLGIQ*EETVQC Trigger: ACATTGAACTGTTTCCTCCAACTGAATGCCCAGACA...AGTGTGGAGCATACTGACAGTGTTGCATATTGTTGATGGCCATCGCAGAAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTCATTGAGTTTAGGAAATTTGATGTATTTAGACTCAGGCTGTGTGTCCTGTCTCTAGCTCCTTCATaGGGGACCCTGTGCTCCGTC | + |
|
Preference number: 3 (lower is better) Translates to: SFIEFRKFDVFRLRLCVLSLAPS*GTLCSV Trigger: GACGGAGCACAGGGTCCCCAATGAAGGAGCTAGAGA...CAGGACACACAGCCTGAGTCTAAATACATCAAATTTCCTAAACTCAATGAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR GCA 72 bp | TCTACAGTCCTCTTTCTTATAACTCCCAGAACAATTTaGCTAGAGGTGGCACTGTCACTAGCAGTAGGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: STVLFLITPRTI*LEVALSLAVGS Trigger: TGACCCTACTGCTAGTGACAGTGCCACCTCTAGGCAAATTGTTCTGGGAGTTATAAGAAAGAGGACTGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR CAA 90 bp | GAACTTGGATACAGACACTCAATGAGAGCACATAGAAAAATGCTGATTACTGGCTGGCTCCACAGTGCCTaGTGCCACCTAAACAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ELGYRHSMRAHRKMLITGWLHSA*CHLNKE Trigger: TTCTTTGTTTAGGTGGCACAAGGCACTGTGGAGCCA...GCCAGTAATCAGCATTTTTCTATGTGCTCTCATTGAGTGTCTGTATCCAAGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR GCA 72 bp | AACATTTACCATCTTAAGATGGCGCTGGCTCCACAGTaGCTTGTGCCACCTAAACAAAGAACAAGCTATATG | + |
|
Preference number: 3 (lower is better) Translates to: NIYHLKMALAPQ*LVPPKQRTSYM Trigger: CATATAGCTTGTTCTTTGTTTAGGTGGCACAAGGCACTGTGGAGCCAGCGCCATCTTAAGATGGTAAATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR CCA 72 bp | ACACAGCTCTTTGAAGGCAGTGGGTTTTCTCTAAGTTaGCATACTTATCATCTGGACACCTCACACACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: TQLFEGSGFSLS*HTYHLDTSHTV Trigger: AACAGTGTGTGAGGTGTCCAGATGATAAGTATGCCAACTTAGAGAAAACCCACTGCCTTCAAAGAGCTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| 3UTR TCA 72 bp | AAATCCGTCTTACCCACCTGTTATCAATGTGTCACTTaGCGTCTTCAATTATACATTTCTCCTCTCGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: KSVLPTCYQCVT*RLQLYISPLAL Trigger: GAGAGCGAGAGGAGAAATGTATAATTGAAGACGTCAAGTGACACATTGATAACAGGTGGGTAAGACGGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTACAGTCCTCTTTCTTATAACTCCCAGAACAATTTGCCTAGAGGTGGCACTCTTTCTGAGCCTTCTTaGTCTAGCTCAATATGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: LYSPLSYNSQNNLPRGGTLSEPS*SSSICY Trigger: ATAACATATTGAGCTAGACAAAGAAGGCTCAGAAAG...AGTGCCACCTCTAGGCAAATTGTTCTGGGAGTTATAAGAAAGAGGACTGTAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR CAA 90 bp | GCGTATTTTAGGAGTGTATGGAGGTGCTATAACTGGTGTTCTGGACACAGGAAACTTTCTGAGCCTTCTTaGTCTAGCTCAATATGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: AYFRSVWRCYNWCSGHRKLSEPS*SSSICY Trigger: ATAACATATTGAGCTAGACAAAGAAGGCTCAGAAAG...TTTCCTGTGTCCAGAACACCAGTTATAGCACCTCCATACACTCCTAAAATACGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR-3UTR CAA 90 bp | CAACACTGTAGAAATAGCCACTGTGAAAAATACTCCAAATGTGGTCTGCTGCAGTGTGAGTTGTGTCCTTaGTCTGTATGTACACATACA | + |
|
Preference number: 3 (lower is better) Translates to: QHCRNSHCEKYSKCGLLQCELCP*SVCTHT Trigger: TGTATGTGTACATACAGACAAAGGACACAACTCACA...CTGCAGCAGACCACATTTGGAGTATTTTTCACAGTGGCTATTTCTACAGTGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTCATTGAGTTTAGGAAATTTGATGTATTTAGACTCAGGCTGTGTGTCCTGTGTCTGGGCATTCAGTaGGAGGAAACAGTTCAATGT | + |
|
Preference number: 3 (lower is better) Translates to: SFIEFRKFDVFRLRLCVLCLGIQ*EETVQC Trigger: ACATTGAACTGTTTCCTCCAACTGAATGCCCAGACA...CAGGACACACAGCCTGAGTCTAAATACATCAAATTTCCTAAACTCAATGAAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR TCA 72 bp | GGAAATTTGATGTATTTAGACTCAGGCTGTGTGTCCTaGTTTATTAGAGTTGTCAGAAATCTTCACACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GNLMYLDSGCVS*FIRVVRNLHTG Trigger: GCCTGTGTGAAGATTTCTGACAACTCTAATAAATCAGGACACACAGCCTGAGTCTAAATACATCAAATTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR CCA 72 bp | GATCTCTTTCTTCCCAAGTGCACATTCCAAACTGTATaGTATGAAGTTAATGGATATTCACATTTATCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: DLFLPKCTFQTV*YEVNGYSHLSL Trigger: GAGGGATAAATGTGAATATCCATTAACTTCATACCATACAGTTTGGAATGTGCACTTGGGAAGAAAGAGATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCCTCAAAAATGTCAGTAGAAAAATCCGTCTTACCCACCTGTTATCAATGTACAATGGGAGTATCCTaGTACTTCACAAAAGTTACT | + |
|
Preference number: 3 (lower is better) Translates to: CSSKMSVEKSVLPTCYQCTMGVS*YFTKVT Trigger: AGTAACTTTTGTGAAGTACAAGGATACTCCCATTGT...ACATTGATAACAGGTGGGTAAGACGGATTTTTCTACTGACATTTTTGAGGAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGTGTGTTTTCATATAAAGTTCAAGAGCTTTATACAGCAGGCACAGTTTGAACTGAAGGTTAGGAATTaGGCTTCATTGAATCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: MVCFHIKFKSFIQQAQFELKVRN*ASLNLS Trigger: TGACAGATTCAATGAAGCCAAATTCCTAACCTTCAG...TTCAAACTGTGCCTGCTGTATAAAGCTCTTGAACTTTATATGAAAACACACCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| 3UTR GCA 72 bp | ATTTTCATTCTTGATGCTATATGCCTCATAGACATATaGATATCCCTCTCATTGTGGGAAGATCTCTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: IFILDAICLIDI*ISLSLWEDLFL Trigger: AAGAAAGAGATCTTCCCACAATGAGAGGGATATGCATATGTCTATGAGGCATATAGCATCAAGAATGAAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| 3UTR TCA 72 bp | ATAAAGTTTTACCAATATGACCCACAAAATATGATCTaGATAAGTATTACTGCCCTGGAAGCATGGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: IKFYQYDPQNMI*ISITALEAWKE Trigger: TTCCTTCCATGCTTCCAGGGCAGTAATACTTATTCAGATCATATTTTGTGGGTCATATTGGTAAAACTTTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCTCACTCGCACCTGCTCACCAACCCACCCATTCCTACTTCCTACTCCTGCAAGGAGACCATGGCATaGGACAAGAGTGTGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPHSHLLTNPPIPTSYSCKETMA*DKSVSL Trigger: CAAGGACACACTCTTGTCCCATGCCATGGTCTCCTT...GCAGGAGTAGGAAGTAGGAATGGGTGGGTTGGTGAGCAGGTGCGAGTGAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR CAA 72 bp | GCAAGCTCCTGTTGTCATCCTCAATCGTGTCGGTGTTaGGTGGTTGCTTATGGGATGGATCCCCAGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASSCCHPQSCRC*VVAYGMDPQVG Trigger: CCCCACCTGGGGATCCATCCCATAAGCAACCACCAAACACCGACACGATTGAGGATGACAACAGGAGCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCTCACTCGCACCTGCTCACCAACCCACCCATTCCTACTTCCTACTCCTGCCCTGCTGACAATCAGTaGATGTTCCTTTGGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: SPHSHLLTNPPIPTSYSCPADNQ*MFLWVL Trigger: CAGTACCCAAAGGAACATTCACTGATTGTCAGCAGG...GCAGGAGTAGGAAGTAGGAATGGGTGGGTTGGTGAGCAGGTGCGAGTGAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR CAA 72 bp | CCTGTTGTCATCCTCAATCGTGTCGGTGTTTGGTGGTaGCTTATGGGATGGATCCCCAGGTGGGGTAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVVILNRVGVWW*LMGWIPRWGSL Trigger: GAGACTACCCCACCTGGGGATCCATCCCATAAGCAACCACCAAACACCGACACGATTGAGGATGACAACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR GCA 90 bp | CCTATCCCCTCACTCGCACCTGCTCACCAACCCACCCATTCCTACTTCCTACTCGTCATATTTGTGCAGTaGTGTCCATTCCGATGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PIPSLAPAHQPTHSYFLLVIFVQ*CPFRCV Trigger: AACACATCGGAATGGACAGCACTGCACAAATATGAC...GAGTAGGAAGTAGGAATGGGTGGGTTGGTGAGCAGGTGCGAGTGAGGGGATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGTTGCTTATGGGATGGATCCCCAGGTGGGGTAGTCTCTGGATGGTCATGCCAGGTTAGGATTAAATaGTCCAAAGAAAACCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGCLWDGSPGGVVSGWSCQVRIK*SKENLQ Trigger: CTGCAGGTTTTCTTTGGATCATTTAATCCTAACCTG...GCATGACCATCCAGAGACTACCCCACCTGGGGATCCATCCCATAAGCAACCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR TCA 90 bp | GGGCTTCTGCGATGGCCATCAACAATATGCAACACTGTCAGTATGCTCCACACTCTGATGATCCTCCTGTaGCCCACTCCAAATCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLLRWPSTICNTVSMLHTLMILL*PTPNLQ Trigger: CTGAAGATTTGGAGTGGGTCACAGGAGGATCATCAG...AGTGTGGAGCATACTGACAGTGTTGCATATTGTTGATGGCCATCGCAGAAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR CCA 90 bp | CCTATCCCCTCACTCGCACCTGCTCACCAACCCACCCATTCCTACTTCCTACTCTCCTCCAAAAACAAATaGGTTCAGTTACATGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PIPSLAPAHQPTHSYFLLSSKNK*VQLHGT Trigger: TGTGCCATGTAACTGAACCCATTTGTTTTTGGAGGA...GAGTAGGAAGTAGGAATGGGTGGGTTGGTGAGCAGGTGCGAGTGAGGGGATAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGTTGCTTATGGGATGGATCCCCAGGTGGGGTAGTCTCTGGATGGTCATGCTCCTCCAAAAACAAATaGGTTCAGTTACATGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GGCLWDGSPGGVVSGWSCSSKNK*VQLHGT Trigger: TGTGCCATGTAACTGAACCCATTTGTTTTTGGAGGA...GCATGACCATCCAGAGACTACCCCACCTGGGGATCCATCCCATAAGCAACCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTTCTGCGATGGCCATCAACAATATGCAACACTGTCAGTATGCTCCACACTGCATCAAGGAGACCATaGCATGGGACAAGAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLLRWPSTICNTVSMLHTASRRP*HGTRVC Trigger: ACACACTCTTGTCCCATGCCATGGTCTCCTTGATGC...AGTGTGGAGCATACTGACAGTGTTGCATATTGTTGATGGCCATCGCAGAAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR CAA 72 bp | CGTCCAATTGATGGCTGTGAGAATCCACTTCTGTATTaGTCAGGCACTGGAAGAACCTCTCCGGAGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPIDGCENPLLY*SGTGRTSPESA Trigger: AGCTGACTCCGGAGAGGTTCTTCCAGTGCCTGACAAATACAGAAGTGGATTCTCACAGCCATCAATTGGACG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR CAA 72 bp | CTAGCTCCTTCATTGGGGACCCTGTGCTCCGTCCAATaGATGGCTGTGAGAATCCACTTCTGTATTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LAPSLGTLCSVQ*MAVRIHFCICQ Trigger: CTGACAAATACAGAAGTGGATTCTCACAGCCATCAATTGGACGGAGCACAGGGTCCCCAATGAAGGAGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR TCA 90 bp | GCCTTCACAGGATCAAGGGCTTCTCCTATTGATGACCAACTAGGCCATCCTCTGACCTTGGTCATCATCTaGGATGACCATTCCTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFTGSRASPIDDQLGHPLTLVII*DDHSYP Trigger: TGGATAGGAATGGTCATCTCAGATGATGACCAAGGT...CAGAGGATGGCCTAGTTGGTCATCAATAGGAGAAGCCCTTGATCCTGTGAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR GCA 90 bp | AAAACACCCTATCCCCTCACTCGCACCTGCTCACCAACCCACCCATTCCTACTTGTCATATTTGTGCAGTaGTGTCCATTCCGATGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KTPYPLTRTCSPTHPFLLVIFVQ*CPFRCV Trigger: AACACATCGGAATGGACAGCACTGCACAAATATGAC...AAGTAGGAATGGGTGGGTTGGTGAGCAGGTGCGAGTGAGGGGATAGGGTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR TCA 90 bp | GGGCTTCTGCGATGGCCATCAACAATATGCAACACTGTCAGTATGCTCCACACTTTACATGGCACAAGATaGGAGAAAACTTCAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLLRWPSTICNTVSMLHTLHGTR*EKTSGA Trigger: GGCTCCTGAAGTTTTCTCTCATCTTGTGCCATGTAA...AGTGTGGAGCATACTGACAGTGTTGCATATTGTTGATGGCCATCGCAGAAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR TCA 90 bp | GCCTTCACAGGATCAAGGGCTTCTCCTATTGATGACCAACTAGGCCATCCTCTGTCTGATGAATTTTCCTaGATCCAGCAGTGCATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AFTGSRASPIDDQLGHPLSDEFS*IQQCMS Trigger: TGACATGCACTGCTGGATTCAGGAAAATTCATCAGA...CAGAGGATGGCCTAGTTGGTCATCAATAGGAGAAGCCCTTGATCCTGTGAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR TCA 90 bp | GCGTATTTTAGGAGTGTATGGAGGTGCTATAACTGGTGTTCTGGACACAGGAAACTGATGATCCTCCTGTaGCCCACTCCAAATCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AYFRSVWRCYNWCSGHRKLMILL*PTPNLQ Trigger: CTGAAGATTTGGAGTGGGTCACAGGAGGATCATCAG...TTTCCTGTGTCCAGAACACCAGTTATAGCACCTCCATACACTCCTAAAATACGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR CAA 72 bp | TTTACCATCTTAAGATGGCGCTGGCTCCACAGTGCCTaGTGCCACCTAAACAAAGAACAAGCTATATGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: FTILRWRWLHSA*CHLNKEQAICA Trigger: TGCGCATATAGCTTGTTCTTTGTTTAGGTGGCACAAGGCACTGTGGAGCCAGCGCCATCTTAAGATGGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR TCA 90 bp | CTCCGTCCAATTGATGGCTGTGAGAATCCACTTCTGTATTTGTCAGGCACTGGAGGTACTGCCATTTGCTaGGATTCTACTTGTAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRPIDGCENPLLYLSGTGGTAIC*DSTCRR Trigger: TCTTCTACAAGTAGAATCTCAGCAAATGGCAGTACC...TCCAGTGCCTGACAAATACAGAAGTGGATTCTCACAGCCATCAATTGGACGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR TCA 90 bp | GCGTATTTTAGGAGTGTATGGAGGTGCTATAACTGGTGTTCTGGACACAGGAAACCTGCTGACAATCAGTaGATGTTCCTTTGGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: AYFRSVWRCYNWCSGHRKPADNQ*MFLWVL Trigger: CAGTACCCAAAGGAACATTCACTGATTGTCAGCAGG...TTTCCTGTGTCCAGAACACCAGTTATAGCACCTCCATACACTCCTAAAATACGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR CCA 90 bp | CAACACTGTAGAAATAGCCACTGTGAAAAATACTCCAAATGTGGTCTGCTGCAGGCATCAAGGAGACCATaGCATGGGACAAGAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QHCRNSHCEKYSKCGLLQASRRP*HGTRVC Trigger: ACACACTCTTGTCCCATGCCATGGTCTCCTTGATGC...CTGCAGCAGACCACATTTGGAGTATTTTTCACAGTGGCTATTTCTACAGTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| 3UTR CAA 72 bp | GGAGGATGTTGTCATAGCCAGGGAAGGGAACAAATATaGGCCAGTTCATACCAAACAATAAGCCATCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: GGCCHSQGREQI*ASSYQTISHQT Trigger: GGTCTGATGGCTTATTGTTTGGTATGAACTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACATCCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR TCA 90 bp | TATTGTTGTTCCTCCTATGGGGATGAAACCTCCTTCAGCTCCTTGAGTACTTCTACCTTGGTCATCATCTaGGATGACCATTCCTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: YCCSSYGDETSFSSLSTSTLVII*DDHSYP Trigger: TGGATAGGAATGGTCATCTCAGATGATGACCAAGGT...AGAAGTACTCAAGGAGCTGAAGGAGGTTTCATCCCCATAGGAGGAACAACAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR TCA 90 bp | AGGAATGGAGGATGTTGTCATAGCCAGGGAAGGGAACAAATATTGGCCAGTTCATTGAGGTTGAACAGTTaGAGTAATTCCACCCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RNGGCCHSQGREQILASSLRLNS*SNSTPV Trigger: TACTGGGGTGGAATTACTTCAACTGTTCAACCTCAA...TGAACTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACATCCTCCATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR TCA 90 bp | AGGAATGGAGGATGTTGTCATAGCCAGGGAAGGGAACAAATATTGGCCAGTTCATCTGATGAATTTTCCTaGATCCAGCAGTGCATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RNGGCCHSQGREQILASSSDEFS*IQQCMS Trigger: TGACATGCACTGCTGGATTCAGGAAAATTCATCAGA...TGAACTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACATCCTCCATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR CCA 90 bp | CTCCGTCCAATTGATGGCTGTGAGAATCCACTTCTGTATTTGTCAGGCACTGGAGAGAAGGCAGTAGAATaGCAATTTTTCTTCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LRPIDGCENPLLYLSGTGEKAVE*QFFFSM Trigger: CATGGAGAAGAAAAATTGCCATTCTACTGCCTTCTC...TCCAGTGCCTGACAAATACAGAAGTGGATTCTCACAGCCATCAATTGGACGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTAACTAAGATAACACAACATTTTGGGAGAAAGATGCACCCTAGCAAGCCTTTGAGGTTGAACAGTTaGAGTAATTCCACCCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLTKITQHFGRKMHPSKPLRLNS*SNSTPV Trigger: TACTGGGGTGGAATTACTTCAACTGTTCAACCTCAA...AGGCTTGCTAGGGTGCATCTTTCTCCCAAAATGTTGTGTTATCTTAGTTAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTAACTAAGATAACACAACATTTTGGGAGAAAGATGCACCCTAGCAAGCCTGGTACTGCCATTTGCTaGGATTCTACTTGTAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLTKITQHFGRKMHPSKPGTAIC*DSTCRR Trigger: TCTTCTACAAGTAGAATCTCAGCAAATGGCAGTACC...AGGCTTGCTAGGGTGCATCTTTCTCCCAAAATGTTGTGTTATCTTAGTTAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTAACTAAGATAACACAACATTTTGGGAGAAAGATGCACCCTAGCAAGCCTCAGGTTAGGATTAAATaGTCCAAAGAAAACCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLTKITQHFGRKMHPSKPQVRIK*SKENLQ Trigger: CTGCAGGTTTTCTTTGGATCATTTAATCCTAACCTG...AGGCTTGCTAGGGTGCATCTTTCTCCCAAAATGTTGTGTTATCTTAGTTAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGAAATAGCCACTGTGAAAAATACTCCAAATGTGGTCTGCTGCAGGATACAATGGGTTCAGTTACATaGCACAAGATGAGAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CRNSHCEKYSKCGLLQDTMGSVT*HKMREN Trigger: GTTTTCTCTCATCTTGTGCCATGTAACTGAACCCAT...TGTATCCTGCAGCAGACCACATTTGGAGTATTTTTCACAGTGGCTATTTCTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| 3UTR CAA 72 bp | AAAATCCGTCTTACCCACCTGTTATCAATGTGTCACTaGACGTCTTCAATTATACATTTCTCCTCTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KIRLTHLLSMCH*TSSIIHFSSRS Trigger: AGAGCGAGAGGAGAAATGTATAATTGAAGACGTCAAGTGACACATTGATAACAGGTGGGTAAGACGGATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| 3UTR CAA 72 bp | AGAATGCGGTTATTGGCCTTCACAATGGGAGTATCCTaGTACTTCACAAAAGTTACTAGTACTAGAACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RMRLLAFTMGVS*YFTKVTSTRTV Trigger: CACAGTTCTAGTACTAGTAACTTTTGTGAAGTACAAGGATACTCCCATTGTGAAGGCCAATAACCGCATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| 3UTR CAA 72 bp | CCCAGAACAAAGTGGAAGGCAATGACTGAGCCTTTGTaGCAAATAATGATGGTCTTTCCATATTCAGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRTKWKAMTEPL*QIMMVFPYSDC Trigger: ACAATCTGAATATGGAAAGACCATCATTATTTGCAACAAAGGCTCAGTCATTGCCTTCCACTTTGTTCTGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
||
| 3UTR CAA 72 bp | TGTCAGAAATCTTCACACAGGCTGTGCATAATTAATTaGCTAAGTGACCGCTCAGATTTTCTACTTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CQKSSHRLCIIN*LSDRSDFLLEE Trigger: TTCCTCAAGTAGAAAATCTGAGCGGTCACTTAGCAAATTAATTATGCACAGCCTGTGTGAAGATTTCTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS-3UTR CCA 90 bp | AGTTTCATTGAGTTTAGGAAATTTGATGTATTTAGACTCAGGCTGTGTGTCCTGATGGGTTCAGTTACATaGCACAAGATGAGAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SFIEFRKFDVFRLRLCVLMGSVT*HKMREN Trigger: GTTTTCTCTCATCTTGTGCCATGTAACTGAACCCAT...CAGGACACACAGCCTGAGTCTAAATACATCAAATTTCCTAAACTCAATGAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS CCA 90 bp | GAAGCATCAAGGAGACCATGGCATGGGACAAGAGTGTGTCCTTGGTaGCCACCTGATGGACATAGGGAAACTGGTCATGGTCACTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EASRRPWHGTRVCPW*PPDGHRETGHGHSG Trigger: ACCTGAGTGACCATGACCAGTTTCCCTATGTCCATCAGGTGGCCACCAAGGACACACTCTTGTCCCATGCCATGGTCTCCTTGATGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS CCA 90 bp | AATGAAGCATCAAGGAGACCATGGCATGGGACAAGAGTGTGTCCTTaGTGGCCACCTGATGGACATAGGGAAACTGGTCATGGTCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: NEASRRPWHGTRVCP*WPPDGHRETGHGHS Trigger: TGAGTGACCATGACCAGTTTCCCTATGTCCATCAGGTGGCCACCAAGGACACACTCTTGTCCCATGCCATGGTCTCCTTGATGCTTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS TCA 90 bp | CACAGTCAAAGCAGCAGTCTGCTGTTTCATTCTGATGAATTTTCCTaGATCCAGCAGTGCATGTCATACTACACATGGAGGAGGGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: HSQSSSLLFHSDEFS*IQQCMSYYTWRREL Trigger: CAGTTCCCTCCTCCATGTGTAGTATGACATGCACTGCTGGATTCAGGAAAATTCATCAGAATGAAACAGCAGACTGCTGCTTTGACTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS GCA 90 bp | GTTGGCATACTTATCATCTGGACACCTCACACACTGTTCCATATCTaGTGTTTCATTGGAAACCTCATTTTCTGGGCACTGAACACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VGILIIWTPHTLFHI*CFIGNLIFWALNTV Trigger: GACTGTGTTCAGTGCCCAGAAAATGAGGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTGAGGTGTCCAGATGATAAGTATGCCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164875.3 |
||
| CDS CCA 90 bp | CACACACTGTTCCATATCTGCTGTTTCATTGGAAACCTCATTTTCTaGGCACTGAACACAGTCAAAGCAGCAGTCTGCTGTTTCATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HTLFHICCFIGNLIF*ALNTVKAAVCCFIL Trigger: CAGAATGAAACAGCAGACTGCTGCTTTGACTGTGTTCAGTGCCCAGAAAATGAGGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164875.3 |
||
| CDS-3UTR CAA 90 bp | GCGTATTTTAGGAGTGTATGGAGGTGCTATAACTGGTGTTCTGGACACAGGAAATTCAGATATATGAAGTaGCTGGCTCCGTGGGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: AYFRSVWRCYNWCSGHRKFRYMK*LAPWVT Trigger: TGTTACCCACGGAGCCAGCAACTTCATATATCTGAA...TTTCCTGTGTCCAGAACACCAGTTATAGCACCTCCATACACTCCTAAAATACGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
||
| CDS CCA 90 bp | TTCTCCATGCAAGTATGTACCTGTTTCATTGGAAACCTCATTTTCTaGGCACTGAACACAGTCAAAGCAGCAGTCTGCTGTTTCATTCTG | + |
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Preference number: 5 (lower is better) Translates to: FSMQVCTCFIGNLIF*ALNTVKAAVCCFIL Trigger: CAGAATGAAACAGCAGACTGCTGCTTTGACTGTGTTCAGTGCCCAGAAAATGAGGTTTCCAATGAAACAGGTACATACTTGCATGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
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| CDS TCA 90 bp | ATGGACATAGGGAAACTGGTCATGGTCACTCAGGTTAGGATTAAATaGTCCAAAGAAAACCTGCAGGATGTAGAAGAGAGGATGAGACAT | + |
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Preference number: 5 (lower is better) Translates to: MDIGKLVMVTQVRIK*SKENLQDVEERMRH Trigger: ATGTCTCATCCTCTCTTCTACATCCTGCAGGTTTTCTTTGGATCATTTAATCCTAACCTGAGTGACCATGACCAGTTTCCCTATGTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| CDS-3UTR CAA 90 bp | CCTGTTATCAATGTGTCACTTGACGTCTTCAATTATACATTTCTCCTCTCGCTCTTCAGATATATGAAGTaGCTGGCTCCGTGGGTAACA | + |
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Preference number: 5 (lower is better) Translates to: PVINVSLDVFNYTFLLSLFRYMK*LAPWVT Trigger: TGTTACCCACGGAGCCAGCAACTTCATATATCTGAA...GAGCGAGAGGAGAAATGTATAATTGAAGACGTCAAGTGACACATTGATAACAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| CDS-3UTR CAA 90 bp | TATTGTTGTTCCTCCTATGGGGATGAAACCTCCTTCAGCTCCTTGAGTACTTCTTATGTACCTGTTTCATaGGAAACCTCATTTTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: YCCSSYGDETSFSSLSTSYVPVS*ETSFSG Trigger: CCCAGAAAATGAGGTTTCCAATGAAACAGGTACATA...AGAAGTACTCAAGGAGCTGAAGGAGGTTTCATCCCCATAGGAGGAACAACAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
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| CDS CCA 90 bp | AGAATGGCAATTTTTCTTCTCCATGCAAGTATGTACCTGTTTCATTaGAAACCTCATTTTCTGGGCACTGAACACAGTCAAAGCAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: RMAIFLLHASMYLFH*KPHFLGTEHSQSSS Trigger: ACTGCTGCTTTGACTGTGTTCAGTGCCCAGAAAATGAGGTTTCCAATGAAACAGGTACATACTTGCATGGAGAAGAAAAATTGCCATTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233971.2 |
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| CDS TCA 90 bp | CAGATTCCATGTCTTTGCATTTCTTCTCTCAAGTCTGATAGAAACTaGATACCTTGGTCATCATCTGAGATGACCATTCCTATCCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: QIPCLCISSLKSDRN*IPWSSSEMTIPIQV Trigger: GACTTGGATAGGAATGGTCATCTCAGATGATGACCAAGGTATTCAGTTTCTATCAGACTTGAGAGAAGAAATGCAAAGACATGGAATCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| CDS-3UTR CAA 90 bp | AGTTTCATTGAGTTTAGGAAATTTGATGTATTTAGACTCAGGCTGTGTGTCCTGACAATGGGAGTATCCTaGTACTTCACAAAAGTTACT | + |
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Preference number: 5 (lower is better) Translates to: SFIEFRKFDVFRLRLCVLTMGVS*YFTKVT Trigger: AGTAACTTTTGTGAAGTACAAGGATACTCCCATTGT...CAGGACACACAGCCTGAGTCTAAATACATCAAATTTCCTAAACTCAATGAAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164875.3 |
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| CDS CCA 72 bp | AGGAGACCATGGCATGGGACAAGAGTGTGTCCTTGGTaGCCACCTGATGGACATAGGGAAACTGGTCATGGT | + |
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Preference number: 6 (lower is better) Translates to: RRPWHGTRVCPW*PPDGHRETGHG Trigger: ACCATGACCAGTTTCCCTATGTCCATCAGGTGGCCACCAAGGACACACTCTTGTCCCATGCCATGGTCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| CDS CCA 72 bp | TCAAGGAGACCATGGCATGGGACAAGAGTGTGTCCTTaGTGGCCACCTGATGGACATAGGGAAACTGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SRRPWHGTRVCP*WPPDGHRETGH Trigger: ATGACCAGTTTCCCTATGTCCATCAGGTGGCCACCAAGGACACACTCTTGTCCCATGCCATGGTCTCCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| CDS GCA 72 bp | ACCTTCCTCACTCAGGGCCATGTCATATTTGTGCAGTaGTGTCCATTCCGATGTGTTGTTGAATGTAAGATG | + |
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Preference number: 6 (lower is better) Translates to: TFLTQGHVIFVQ*CPFRCVVECKM Trigger: CATCTTACATTCAACAACACATCGGAATGGACAGCACTGCACAAATATGACATGGCCCTGAGTGAGGAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| CDS TCA 72 bp | GGGAAACTGGTCATGGTCACTCAGGTTAGGATTAAATaGTCCAAAGAAAACCTGCAGGATGTAGAAGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: GKLVMVTQVRIK*SKENLQDVEER Trigger: CCTCTCTTCTACATCCTGCAGGTTTTCTTTGGATCATTTAATCCTAACCTGAGTGACCATGACCAGTTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| CDS TCA 72 bp | GTAAATATCCTGGACTTCAGCATGGAAGACACCTGCTaGCAATCAGTGAATGTTCCTTTGGGTACTGCCATT | + |
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Preference number: 6 (lower is better) Translates to: VNILDFSMEDTC*QSVNVPLGTAI Trigger: AATGGCAGTACCCAAAGGAACATTCACTGATTGTCAGCAGGTGTCTTCCATGCTGAAGTCCAGGATATTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| CDS TCA 72 bp | TACTACACATGGAGGAGGGAACTGATGATCCTCCTGTaGCCCACTCCAAATCTTCAGATATATGAAGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: YYTWRRELMILL*PTPNLQIYEVA Trigger: AGCAACTTCATATATCTGAAGATTTGGAGTGGGTCACAGGAGGATCATCAGTTCCCTCCTCCATGTGTAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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| CDS TCA 72 bp | TGTCTTTGCATTTCTTCTCTCAAGTCTGATAGAAACTaGATACCTTGGTCATCATCTGAGATGACCATTCCT | + |
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Preference number: 6 (lower is better) Translates to: CLCISSLKSDRN*IPWSSSEMTIP Trigger: AGGAATGGTCATCTCAGATGATGACCAAGGTATTCAGTTTCTATCAGACTTGAGAGAAGAAATGCAAAGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164875.3 ENSMUST00000233971.2 |
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