RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN2R107 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000056910

Ensembl transcript IDs: ENSMUST00000042090.8, ENSMUST00000233421.2, ENSMUST00000233836.2

Found 399 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGACACGAGGATCTTCCGGAGTTCTGTCTGGAAGTCTCTCATGGTaGCCTGGACAGCAGGCAGGCAGGTTGGCCGTTGCTCGAAGAACT +
Preference number: 1 (lower is better)
Translates to: ETRGSSGVLSGSLSW*PGQQAGRLAVARRT
Trigger: AGTTCTTCGAGCAACGGCCAACCTGCCTGCCTGCTGTCCAGGCCACCATGAGAGACTTCCAGACAGAACTCCGGAAGATCCTCGTGTCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 90 bp CAAGAAAGTCAGGACTGGAACTCAAGCAGGGCAAGGAGCAGGAGCTaGTGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCTCTC +
Preference number: 1 (lower is better)
Translates to: QESQDWNSSRARSRS*CRGHGGMFFTGLPL
Trigger: GAGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTCCTTGCCCTGCTTGAGTTCCAGTCCTGACTTTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 90 bp GCAGAAGGGCCTTTGAGGTTCTGCTCTCAGGAAAGCCCATCTCTGTaGGCTGCCACAAGGCATTCTCATCCATTCGCTCATCCTCATCTT +
Preference number: 1 (lower is better)
Translates to: AEGPLRFCSQESPSL*AATRHSHPFAHPHL
Trigger: AAGATGAGGATGAGCGAATGGATGAGAATGCCTTGTGGCAGCTCACAGAGATGGGCTTTCCTGAGAGCAGAACCTCAAAGGCCCTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 90 bp GAGGTGGGCAAATTTCTGAGTTCGAGGCCAGCCTGGTGTACAGATTaGGTTCCAGGACAACCAGGGCTTCAGAGGAATCCTGTCTCAACA +
Preference number: 1 (lower is better)
Translates to: EVGKFLSSRPAWCTD*VPGQPGLQRNPVST
Trigger: TGTTGAGACAGGATTCCTCTGAAGCCCTGGTTGTCCTGGAACTCAATCTGTACACCAGGCTGGCCTCGAACTCAGAAATTTGCCCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 90 bp AGGGCCTTTGAGGTTCTGCTCTCAGGAAAGCCCATCTCTGTGAGCTaGCACAAGGCATTCTCATCCATTCGCTCATCCTCATCTTCATCC +
Preference number: 1 (lower is better)
Translates to: RAFEVLLSGKPISVS*HKAFSSIRSSSSSS
Trigger: GGATGAAGATGAGGATGAGCGAATGGATGAGAATGCCTTGTGGCAGCTCACAGAGATGGGCTTTCCTGAGAGCAGAACCTCAAAGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 90 bp GATAGCTTTGGCCAACACAGTGGCAAGAGCCATAGTGAAAGCAACTaGAAAGGTGGTCTGCTGAAGGATGCAGGCAACTGTGTTGGGCTG +
Preference number: 1 (lower is better)
Translates to: DSFGQHSGKSHSESN*KGGLLKDAGNCVGL
Trigger: CAGCCCAACACAGTTGCCTGCATCCTTCAGCAGACCACCTTTGCAGTTGCTTTCACTATGGCTCTTGCCACTGTGTTGGCCAAAGCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CCA 90 bp GCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGACATCAATaGGAGGAGAGGCTTCTAGTCCTGGGAAGGCTCCATTGCCCAGTG +
Preference number: 1 (lower is better)
Translates to: APAVFIAQDGLVRHQ*EERLLVLGRLHCPV
Trigger: CACTGGGCAATGGAGCCTTCCCAGGACTAGAAGCCTCTCCTCCCATTGATGTCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 90 bp AAACTGCACCAGGATTCAGGGCTAACAGCTTCTGTGCCATCTCAGTaGGAGACACGAGGATCTTCCGGAGTTCTGTCTGGAAGTCTCTCA +
Preference number: 1 (lower is better)
Translates to: KLHQDSGLTASVPSQ*ETRGSSGVLSGSLS
Trigger: TGAGAGACTTCCAGACAGAACTCCGGAAGATCCTCGTGTCTCTCACTGAGATGGCACAGAAGCTGTTAGCCCTGAATCCTGGTGCAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 90 bp AGCAGTTTGGGGAGGAAAGGGTTTATTCGGCTTACACTTCCATACTaGTATTCATCACCAAGAAAGTCAGGACTGGAACTCAAGCAGGGC +
Preference number: 1 (lower is better)
Translates to: SSLGRKGFIRLTLPY*YSSPRKSGLELKQG
Trigger: GCCCTGCTTGAGTTCCAGTCCTGACTTTCTTGGTGATGAATAGCAGTATGGAAGTGTAAGCCGAATAAACCCTTTCCTCCCCAAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CCA 90 bp AATGAACCATCAAAGAAACAATGGCAAGTGAAAGAGATGTGTCCTTaGGAGCCATCTGGTAGAGAGAAGGATACTGACCACGGTCACTCA +
Preference number: 1 (lower is better)
Translates to: NEPSKKQWQVKEMCP*EPSGREKDTDHGHS
Trigger: TGAGTGACCGTGGTCAGTATCCTTCTCTCTACCAGATGGCTCCCAAGGACACATCTCTTTCACTTGCCATTGTTTCTTTGATGGTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 90 bp TTTCCCATTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATaGCCAAGAAGCAGTTTGGGGAGGAAAGGGTTTATTCGGCTTACA +
Preference number: 1 (lower is better)
Translates to: FPIVLVRVSIPAQTS*PRSSLGRKGFIRLT
Trigger: TGTAAGCCGAATAAACCCTTTCCTCCCCAAACTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAATGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 90 bp AACCCAAGACCACCTAAAATGAACCATCAAAGAAACAATGGCAAGTaGAAGAGATGTGTCCTTGGGAGCCATCTGGTAGAGAGAAGGATA +
Preference number: 1 (lower is better)
Translates to: NPRPPKMNHQRNNGK*KRCVLGSHLVERRI
Trigger: TATCCTTCTCTCTACCAGATGGCTCCCAAGGACACATCTCTTTCACTTGCCATTGTTTCTTTGATGGTTCATTTTAGGTGGTCTTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 90 bp ATAACAAGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTaGTGTCACTCAGCTCCCTTTCCGAAGCAGCATGTACTAGCTTAT +
Preference number: 1 (lower is better)
Translates to: ITRHPGPGCFLPRLF*CHSAPFPKQHVLAY
Trigger: ATAAGCTAGTACATGCTGCTTCGGAAAGGGAGCTGAGTGACAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCTTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 90 bp CTTCACACACTGGTCTACATCTGTCTCATTAGAAATCTCATTGTCTaGACAGGGAGTACAATTGTAGCAGCAGATAGCCTTATTCTCCAG +
Preference number: 1 (lower is better)
Translates to: LHTLVYICLIRNLIV*TGSTIVAADSLILQ
Trigger: CTGGAGAATAAGGCTATCTGCTGCTACAATTGTACTCCCTGTGCAGACAATGAGATTTCTAATGAGACAGATGTAGACCAGTGTGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 90 bp TTGTGGTCATCTGGGAGAATTAGACCAACCCAAGACCACCTAAAATaGACCATCAAAGAAACAATGGCAAGTGAAAGAGATGTGTCCTTG +
Preference number: 1 (lower is better)
Translates to: LWSSGRIRPTQDHLK*TIKETMASERDVSL
Trigger: CAAGGACACATCTCTTTCACTTGCCATTGTTTCTTTGATGGTTCATTTTAGGTGGTCTTGGGTTGGTCTAATTCTCCCAGATGACCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CCA 90 bp GTTGACTCTCACCTCAATATCCTTCAGGAAAGTATTAAGCTGCCATaGAAAGAACTCCATCCCTTCTTCATTTTCACACGGTTGTGTTTG +
Preference number: 1 (lower is better)
Translates to: VDSHLNILQESIKLP*KELHPFFIFTRLCL
Trigger: CAAACACAACCGTGTGAAAATGAAGAAGGGATGGAGTTCTTTCCATGGCAGCTTAATACTTTCCTGAAGGATATTGAGGTGAGAGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 90 bp TATTGCCAAGTTATGTATTCCCTCACTTTCTATGATGTGACAAATTaGCAACACTCTTTAGCCCAATCCTTCCTTTGCTCTTGCTCTGCC +
Preference number: 1 (lower is better)
Translates to: YCQVMYSLTFYDVTN*QHSLAQSFLCSCSA
Trigger: GGCAGAGCAAGAGCAAAGGAAGGATTGGGCTAAAGAGTGTTGTCAATTTGTCACATCATAGAAAGTGAGGGAATACATAACTTGGCAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 90 bp GGTCTCAAGTTGGGCTTGTTATTGTTTGACCATTCCCCTAGGATATaGTCCATTAACAGTCACCTCATTTCTTGTAGACATGAGCAATTT +
Preference number: 1 (lower is better)
Translates to: GLKLGLLLFDHSPRI*SINSHLISCRHEQF
Trigger: AAATTGCTCATGTCTACAAGAAATGAGGTGACTGTTAATGGAGCATATCCTAGGGGAATGGTCAAACAATAACAAGCCCAACTTGAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 90 bp AAACTGTTGACTCTCACCTCAATATCCTTCAGGAAAGTATTAAGCTaGCATGGAAAGAACTCCATCCCTTCTTCATTTTCACACGGTTGT +
Preference number: 1 (lower is better)
Translates to: KLLTLTSISFRKVLS*HGKNSIPSSFSHGC
Trigger: ACAACCGTGTGAAAATGAAGAAGGGATGGAGTTCTTTCCATGGCAGCTTAATACTTTCCTGAAGGATATTGAGGTGAGAGTCAACAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 90 bp ACCATGTTCAATATGAGCATCTTGGTCAATGTATGGTGGAGATATTaGCATCCATATTCCACAAAGAAGAAGTTGGATCAGGGTGCAGAT +
Preference number: 1 (lower is better)
Translates to: TMFNMSILVNVWWRY*HPYSTKKKLDQGAD
Trigger: ATCTGCACCCTGATCCAACTTCTTCTTTGTGGAATATGGATGGCAATATCTCCACCATACATTGACCAAGATGCTCATATTGAACATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 90 bp ACCTCATTTCTTGTAGACATGAGCAATTTGGGGTTGAAATTTAGGTaGGTTTGTTGTTGTCCCTATCACACTACTGTGTTTACTGTCTGG +
Preference number: 1 (lower is better)
Translates to: TSFLVDMSNLGLKFR*VCCCPYHTTVFTVW
Trigger: CCAGACAGTAAACACAGTAGTGTGATAGGGACAACAACAAACTCACCTAAATTTCAACCCCAAATTGCTCATGTCTACAAGAAATGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 90 bp TCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCTGTGTCAAATTaGCACAAAACTAGCCACTACATCCATCAAACTAATATATGCAAG +
Preference number: 1 (lower is better)
Translates to: STEAPFSVITPAVSN*HKTSHYIHQTNICK
Trigger: CTTGCATATATTAGTTTGATGGATGTAGTGGCTAGTTTTGTGTCAATTTGACACAGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 90 bp TTTGATCTTGGTTCCTCCTTCTCTAGTCCTCTCCGTCTTGTTGACTaGTTCAAAGTTTACTTTGTTATGATTATGTTGTTCCTTTGTAAG +
Preference number: 1 (lower is better)
Translates to: FDLGSSFSSPLRLVD*FKVYFVMIMLFLCK
Trigger: CTTACAAAGGAACAACATAATCATAACAAAGTAAACTTTGAAGCAGTCAACAAGACGGAGAGGACTAGAGAAGGAGGAACCAAGATCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 90 bp AAGGTCTCCCTTCAGCATGCAACATGTGGAGATCTAGAACAAAATTaGAAGACAATTGATTATGATCCTAACATGAAGGTCTGCTTTATT +
Preference number: 1 (lower is better)
Translates to: KVSLQHATCGDLEQN*KTIDYDPNMKVCFI
Trigger: AATAAAGCAGACCTTCATGTTAGGATCATAATCAATTGTCTTTCAATTTTGTTCTAGATCTCCACATGTTGCATGCTGAAGGGAGACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 90 bp TTATCATATTCAATAATATGGGGTTCAATGTTCATGACCCAGACATaGCATGTCAATAACCTTTGCCCAATATTTCGCATTAGACCTTCT +
Preference number: 1 (lower is better)
Translates to: LSYSIIWGSMFMTQT*HVNNLCPIFRIRPS
Trigger: AGAAGGTCTAATGCGAAATATTGGGCAAAGGTTATTGACATGGCATGTCTGGGTCATGAACATTGAACCCCATATTATTGAATATGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CCA 90 bp AGTTGTACTAGCTTTTTAACTTTCCCTCTTCCCATTATATATGGGTaGGCCAATGTTATTTTAGTAATGTACAAGGTCTATGTTTCCCTC +
Preference number: 1 (lower is better)
Translates to: SCTSFLTFPLPIIYG*ANVILVMYKVYVSL
Trigger: GAGGGAAACATAGACCTTGTACATTACTAAAATAACATTGGCCCACCCATATATAATGGGAAGAGGGAAAGTTAAAAAGCTAGTACAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp CTCAGGAAAGCCCATCTCTGTGAGCTGCCACAAGGCATTCTCATCCATTCGCTCCGTGTTCTAGTTCATTaGCCGCCGCCGCCCCGCCCC +
Preference number: 2 (lower is better)
Translates to: LRKAHLCELPQGILIHSLRVLVH*PPPPRP
Trigger: GGGGCGGGGCGGCGGCGGCCAATGAACTAGAACACG...GAGCGAATGGATGAGAATGCCTTGTGGCAGCTCACAGAGATGGGCTTTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp GGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCGCAAGGAGCAGGAGCTaGTGCAGAGGCCATGGAGGG +
Preference number: 2 (lower is better)
Translates to: GLPLLACSACSLIEPKTTARSRS*CRGHGG
Trigger: CCCTCCATGGCCTCTGCATCAGCTCCTGCTCCTTGC...GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp CTCAGGAAAGCCCATCTCTGTGAGCTGCCACAAGGCATTCTCATCCATTCGCTCGCAAGGAGCAGGAGCTaGTGCAGAGGCCATGGAGGG +
Preference number: 2 (lower is better)
Translates to: LRKAHLCELPQGILIHSLARSRS*CRGHGG
Trigger: CCCTCCATGGCCTCTGCATCAGCTCCTGCTCCTTGC...GAGCGAATGGATGAGAATGCCTTGTGGCAGCTCACAGAGATGGGCTTTCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp TCCACCGATGTGCCCTCGGTCATCTCCTTCAGCCACTCAGCCAGCACCATAGGCACTCTGTCTCTTCCTTaGGAGGCCCTCTACCTACTC +
Preference number: 2 (lower is better)
Translates to: STDVPSVISFSHSASTIGTLSLP*EALYLL
Trigger: GAGTAGGTAGAGGGCCTCTCAAGGAAGAGACAGAGT...GCCTATGGTGCTGGCTGAGTGGCTGAAGGAGATGACCGAGGGCACATCGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GCACCATGTTTGAGGCAACTCTCCTTGAGCTTCTCCACCGATGTGCCCTCGGTCTCTCTCATGGTGGCCTaGACAGCAGGCAGGCAGGTT +
Preference number: 2 (lower is better)
Translates to: APCLRQLSLSFSTDVPSVSLMVA*TAGRQV
Trigger: AACCTGCCTGCCTGCTGTCCAGGCCACCATGAGAGA...GACCGAGGGCACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp ACTAGGGTACACATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATCGTGATGAAGGTCACTaGGGCTGGTGGGCGGACCAG +
Preference number: 2 (lower is better)
Translates to: TRVHMEGPMAPAVFIAQDRDEGH*GWWADQ
Trigger: CTGGTCCGCCCACCAGCCTCAGTGACCTTCATCACG...ATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCATGTGTACCCTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp GCACCATGTTTGAGGCAACTCTCCTTGAGCTTCTCCACCGATGTGCCCTCGGTCACTTGGGACCAAATATaGAGGCGAGGAGTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: APCLRQLSLSFSTDVPSVTWDQI*RRGVLC
Trigger: GCACAGCACTCCTCGCCTTCATATTTGGTCCCAAGT...GACCGAGGGCACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp GCACCATGTTTGAGGCAACTCTCCTTGAGCTTCTCCACCGATGTGCCCTCGGTCTGGTCTGCTGAAGGATaGAGGCAACTGTGTTGGGCT +
Preference number: 2 (lower is better)
Translates to: APCLRQLSLSFSTDVPSVWSAEG*RQLCWA
Trigger: AGCCCAACACAGTTGCCTGCATCCTTCAGCAGACCA...GACCGAGGGCACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGACCCAGTGTAGGGGAATaGCAGGATGGGGAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRPSVGE*QDGEEG
Trigger: TCCCTCCTCCCCATCCTGGCATTCCCCTACACTGGG...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GCACCATGTTTGAGGCAACTCTCCTTGAGCTTCTCCACCGATGTGCCCTCGGTCAGGGATGTTCTTTACTaGCTTGCCTCTCCTGGCTTG +
Preference number: 2 (lower is better)
Translates to: APCLRQLSLSFSTDVPSVRDVLY*LASPGL
Trigger: CAAGCCAGGAGAGGCAAGCCAGTAAAGAACATCCCT...GACCGAGGGCACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GCACCATGTTTGAGGCAACTCTCCTTGAGCTTCTCCACCGATGTGCCCTCGGTCCAAGAAAGTCAGGACTaGAACTCAAGCAGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: APCLRQLSLSFSTDVPSVQESQD*NSSRAR
Trigger: CCTTGCCCTGCTTGAGTTCCAGTCCTGACTTTCTTG...GACCGAGGGCACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 90 bp CTGTCTGGAAGTCTCTCATGGTGGCCTGGACAGCAGGCAGGCAGGTaGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGC +
Preference number: 2 (lower is better)
Translates to: LSGSLSWWPGQQAGR*AVARRTAFLSESFC
Trigger: GCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCAACCTGCCTGCCTGCTGTCCAGGCCACCATGAGAGACTTCCAGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp GAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCTCTCCTGCACAAACATCATaGCCAAGAAGCAGTTTGGGG +
Preference number: 2 (lower is better)
Translates to: EQELMQRPWRDVLYWLASPAQTS*PRSSLG
Trigger: CCCCAAACTGCTTCTTGGTCATGATGTTTGTGCAGG...AGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp TCCACCGATGTGCCCTCGGTCATCTCCTTCAGCCACTCAGCCAGCACCATAGGCGTGTACTTTGGAAATTaGTGGGGAATCTTAGGACAG +
Preference number: 2 (lower is better)
Translates to: STDVPSVISFSHSASTIGVYFGN*WGILGQ
Trigger: CTGTCCTAAGATTCCCCAGCAATTTCCAAAGTACAC...GCCTATGGTGCTGGCTGAGTGGCTGAAGGAGATGACCGAGGGCACATCGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTCGTGTTCTAGTTCATTaGCCGCCGCCGCCCCGCCCC +
Preference number: 2 (lower is better)
Translates to: WPLLEELHFCLNPFALVSRVLVH*PPPPRP
Trigger: GGGGCGGGGCGGCGGCGGCCAATGAACTAGAACACG...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCAAGCAACTGCAAAGGTaGTCTGCTGAAGGATGCAGG +
Preference number: 2 (lower is better)
Translates to: GLPLLACSACSLIEPKTTKQLQR*SAEGCR
Trigger: CCTGCATCCTTCAGCAGACCACCTTTGCAGTTGCTT...GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 90 bp AGAGGTGGGCAAATTTCTGAGTTCGAGGCCAGCCTGGTGTACAGATaGAGTTCCAGGACAACCAGGGCTTCAGAGGAATCCTGTCTCAAC +
Preference number: 2 (lower is better)
Translates to: RGGQISEFEASLVYR*SSRTTRASEESCLN
Trigger: GTTGAGACAGGATTCCTCTGAAGCCCTGGTTGTCCTGGAACTCAATCTGTACACCAGGCTGGCCTCGAACTCAGAAATTTGCCCACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp TCCACCGATGTGCCCTCGGTCATCTCCTTCAGCCACTCAGCCAGCACCATAGGCTTGTTTCCATCTAGTTaGCCTGATCATCAGCCAAAT +
Preference number: 2 (lower is better)
Translates to: STDVPSVISFSHSASTIGLFPSS*PDHQPN
Trigger: ATTTGGCTGATGATCAGGTCAACTAGATGGAAACAA...GCCTATGGTGCTGGCTGAGTGGCTGAAGGAGATGACCGAGGGCACATCGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp AGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGTCACTCAGCTCGTGATGAAGGTCACTaGGGCTGGTGGGCGGACCAG +
Preference number: 2 (lower is better)
Translates to: RHPGPGCFLPRLFCCHSARDEGH*GWWADQ
Trigger: CTGGTCCGCCCACCAGCCTCAGTGACCTTCATCACG...AGCTGAGTGACAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp GGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCTCTTCTAAGCTCCCATaGGCACCATGTTTGAGGCAA +
Preference number: 2 (lower is better)
Translates to: GLPLLACSACSLIEPKTTSSKLP*APCLRQ
Trigger: TTGCCTCAAACATGGTGCTCATGGGAGCTTAGAAGA...GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp TTCATTATTGTTATTATTTCCCCCTCAATAATCCTTCCCCCTATACTCCCTACCTCAGCTCGGCCGCCTTaGCCCTCGCTGCCACTGCCC +
Preference number: 2 (lower is better)
Translates to: FIIVIISPSIILPPILPTSARPP*PSLPLP
Trigger: GGGCAGTGGCAGCGAGGGGCAAGGCGGCCGAGCTGA...GGTAGGGAGTATAGGGGGAAGGATTATTGAGGGGGAAATAATAACAATAATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp AGGGATTGGTATGTGCCCATAGGGTGGGTCTCAAGTTGGGCTTGTTATTGTTTGTCTCTCATGGTGGCCTaGACAGCAGGCAGGCAGGTT +
Preference number: 2 (lower is better)
Translates to: RDWYVPIGWVSSWACYCLSLMVA*TAGRQV
Trigger: AACCTGCCTGCCTGCTGTCCAGGCCACCATGAGAGA...CAAACAATAACAAGCCCAACTTGAGACCCACCCTATGGGCACATACCAATCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GATATCCCCATAGATACTTGGATGCCTCTTATGTCCCAGTACTCTGTCTCTTCCGGAAGTCTCTCATGGTaGCCTGGACAGCAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: DIPIDTWMPLMSQYSVSSGSLSW*PGQQAG
Trigger: GCCTGCCTGCTGTCCAGGCCACCATGAGAGACTTCC...GGAAGAGACAGAGTACTGGGACATAAGAGGCATCCAAGTATCTATGGGGATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GCACCATGTTTGAGGCAACTCTCCTTGAGCTTCTCCACCGATGTGCCCTCGGTCCCACAAAGAAGAAGTTaGATCAGGGTGCAGATAGGA +
Preference number: 2 (lower is better)
Translates to: APCLRQLSLSFSTDVPSVPQRRS*IRVQIG
Trigger: TCCTATCTGCACCCTGATCCAACTTCTTCTTTGTGG...GACCGAGGGCACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGATATCCCAGGACAGAGTaGAAGGCAACAGCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRYPRTE*KATAEP
Trigger: GGGCTCAGCTGTTGCCTTCCACTCTGTCCTGGGATA...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp GGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCCCAGCTGTGTCAAATTaGCACAAAACTAGCCACTAC +
Preference number: 2 (lower is better)
Translates to: GLPLLACSACSLIEPKTTPAVSN*HKTSHY
Trigger: GTAGTGGCTAGTTTTGTGTCAATTTGACACAGCTGG...GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp GAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCTCTAGAAACAATGGCAAGTaGAAGAGATGTGTCCTTGGG +
Preference number: 2 (lower is better)
Translates to: EQELMQRPWRDVLYWLASRNNGK*KRCVLG
Trigger: CCCAAGGACACATCTCTTTCACTTGCCATTGTTTCT...AGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp GAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCTCTCGACTGAGGGATCTCTaGAAATATTTCTGGCCATTG +
Preference number: 2 (lower is better)
Translates to: EQELMQRPWRDVLYWLASRLRDL*KYFWPL
Trigger: CAATGGCCAGAAATATTTTCAGAGATCCCTCAGTCG...AGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGAACTTGGGACCAAATATaGAGGCGAGGAGTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRTWDQI*RRGVLC
Trigger: GCACAGCACTCCTCGCCTTCATATTTGGTCCCAAGT...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp GGCAAGAGCCATAGTGAAAGCAACTGCAAAGGTGGTCTGCTGAAGGATGCAGGCGGTCTCCCTTCAGCATaGAACATGTGGAGATCTAGA +
Preference number: 2 (lower is better)
Translates to: GKSHSESNCKGGLLKDAGGLPSA*NMWRSR
Trigger: TCTAGATCTCCACATGTTGCATGCTGAAGGGAGACC...GCCTGCATCCTTCAGCAGACCACCTTTGCAGTTGCTTTCACTATGGCTCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp CTCAGGAAAGCCCATCTCTGTGAGCTGCCACAAGGCATTCTCATCCATTCGCTCGGTCTCCCTTCAGCATaGAACATGTGGAGATCTAGA +
Preference number: 2 (lower is better)
Translates to: LRKAHLCELPQGILIHSLGLPSA*NMWRSR
Trigger: TCTAGATCTCCACATGTTGCATGCTGAAGGGAGACC...GAGCGAATGGATGAGAATGCCTTGTGGCAGCTCACAGAGATGGGCTTTCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp TCCACCGATGTGCCCTCGGTCATCTCCTTCAGCCACTCAGCCAGCACCATAGGCCTCCGTCTTGTTGACTaGTTCAAAGTTTACTTTGTT +
Preference number: 2 (lower is better)
Translates to: STDVPSVISFSHSASTIGLRLVD*FKVYFV
Trigger: AACAAAGTAAACTTTGAAGCAGTCAACAAGACGGAG...GCCTATGGTGCTGGCTGAGTGGCTGAAGGAGATGACCGAGGGCACATCGGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGATGGTCTGCTGAAGGATaGAGGCAACTGTGTTGGGCT +
Preference number: 2 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRWSAEG*RQLCWA
Trigger: AGCCCAACACAGTTGCCTGCATCCTTCAGCAGACCA...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp TCCACCGATGTGCCCTCGGTCATCTCCTTCAGCCACTCAGCCAGCACCATAGGCGAAGGTCTGCTTTATTaGATCTTTGTCAAACAGTTG +
Preference number: 2 (lower is better)
Translates to: STDVPSVISFSHSASTIGEGLLY*IFVKQL
Trigger: CAACTGTTTGACAAAGATCCAATAAAGCAGACCTTC...GCCTATGGTGCTGGCTGAGTGGCTGAAGGAGATGACCGAGGGCACATCGGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGATTCCGGAGTTCTGTCTaGAAGTCTCTCATGGTGGCC +
Preference number: 2 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRFRSSV*KSLMVA
Trigger: GGCCACCATGAGAGACTTCCAGACAGAACTCCGGAA...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCCCACAAAGAAGAAGTTaGATCAGGGTGCAGATAGGA +
Preference number: 2 (lower is better)
Translates to: GLPLLACSACSLIEPKTTPQRRS*IRVQIG
Trigger: TCCTATCTGCACCCTGATCCAACTTCTTCTTTGTGG...GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp GCACCATGTTTGAGGCAACTCTCCTTGAGCTTCTCCACCGATGTGCCCTCGGTCTTGAGCAGTCTACATTaGCAGCAGCATGTATGTATT +
Preference number: 2 (lower is better)
Translates to: APCLRQLSLSFSTDVPSVLSSLH*QQHVCI
Trigger: AATACATACATGCTGCTGTCAATGTAGACTGCTCAA...GACCGAGGGCACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp CTCAGGAAAGCCCATCTCTGTGAGCTGCCACAAGGCATTCTCATCCATTCGCTCCGACTGAGGGATCTCTaGAAATATTTCTGGCCATTG +
Preference number: 2 (lower is better)
Translates to: LRKAHLCELPQGILIHSLRLRDL*KYFWPL
Trigger: CAATGGCCAGAAATATTTTCAGAGATCCCTCAGTCG...GAGCGAATGGATGAGAATGCCTTGTGGCAGCTCACAGAGATGGGCTTTCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp GAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCTCTGTGTACTTTGGAAATTaGTGGGGAATCTTAGGACAG +
Preference number: 2 (lower is better)
Translates to: EQELMQRPWRDVLYWLASVYFGN*WGILGQ
Trigger: CTGTCCTAAGATTCCCCAGCAATTTCCAAAGTACAC...AGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp ACTCAAATTTACTGTAGTAAAGTCTGGATGTGTTGTAGAGAAAAGCAATCCGAATCAGCTCGGCCGCCTTaGCCCTCGCTGCCACTGCCC +
Preference number: 2 (lower is better)
Translates to: TQIYCSKVWMCCREKQSESARPP*PSLPLP
Trigger: GGGCAGTGGCAGCGAGGGGCAAGGCGGCCGAGCTGA...TTCGGATTGCTTTTCTCTACAACACATCCAGACTTTACTACAGTAAATTTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp GGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCCTTCCAAGATTGTTTTaGTGTCACTCAGCTCCCTTT +
Preference number: 2 (lower is better)
Translates to: GLPLLACSACSLIEPKTTLPRLF*CHSAPF
Trigger: AAAGGGAGCTGAGTGACAGCAAAACAATCTTGGAAG...GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp TCCACCGATGTGCCCTCGGTCATCTCCTTCAGCCACTCAGCCAGCACCATAGGCACTTTTGATAGCAGTTaGTCTTCTCTGTATTTGCAT +
Preference number: 2 (lower is better)
Translates to: STDVPSVISFSHSASTIGTFDSS*SSLYLH
Trigger: ATGCAAATACAGAGAAGAGCAACTGCTATCAAAAGT...GCCTATGGTGCTGGCTGAGTGGCTGAAGGAGATGACCGAGGGCACATCGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCGCAATGATCAAGGAATaGAGCCATCATTGCTTAGAC +
Preference number: 2 (lower is better)
Translates to: GLPLLACSACSLIEPKTTAMIKE*SHHCLD
Trigger: GTCTAAGCAATGATGGCTCCATTCCTTGATCATTGC...GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GCACCATGTTTGAGGCAACTCTCCTTGAGCTTCTCCACCGATGTGCCCTCGGTCAATGTGGGCTCTAAGTaGATTGAACTGGTTTACTCA +
Preference number: 2 (lower is better)
Translates to: APCLRQLSLSFSTDVPSVNVGSK*IELVYS
Trigger: TGAGTAAACCAGTTCAATCCACTTAGAGCCCACATT...GACCGAGGGCACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GCTTTAAGTTCAAACAATATTTTGGTGGAAATCTTAGTTCATGTGTCCCCAGGACGTGTTCTAGTTCATTaGCCGCCGCCGCCCCGCCCC +
Preference number: 2 (lower is better)
Translates to: ALSSNNILVEILVHVSPGRVLVH*PPPPRP
Trigger: GGGGCGGGGCGGCGGCGGCCAATGAACTAGAACACG...TCCTGGGGACACATGAACTAAGATTTCCACCAAAATATTGTTTGAACTTAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GATATCCCCATAGATACTTGGATGCCTCTTATGTCCCAGTACTCTGTCTCTTCCGAACTAGGGTACACATaGAGGGACCCATGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: DIPIDTWMPLMSQYSVSSELGYT*RDPWLQ
Trigger: CTGGAGCCATGGGTCCCTCCATGTGTACCCTAGTTC...GGAAGAGACAGAGTACTGGGACATAAGAGGCATCCAAGTATCTATGGGGATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp CTCAGGAAAGCCCATCTCTGTGAGCTGCCACAAGGCATTCTCATCCATTCGCTCCCCTTGATCACTAATTaGGGAAATGCCTTACAGTTG +
Preference number: 2 (lower is better)
Translates to: LRKAHLCELPQGILIHSLPLITN*GNALQL
Trigger: CAACTGTAAGGCATTTCCTCAATTAGTGATCAAGGG...GAGCGAATGGATGAGAATGCCTTGTGGCAGCTCACAGAGATGGGCTTTCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp ATATGCTCCATTAACAGTCACCTCATTTCTTGTAGACATGAGCAATTTGGGGTTCGTGATGAAGGTCACTaGGGCTGGTGGGCGGACCAG +
Preference number: 2 (lower is better)
Translates to: ICSINSHLISCRHEQFGVRDEGH*GWWADQ
Trigger: CTGGTCCGCCCACCAGCCTCAGTGACCTTCATCACG...AACCCCAAATTGCTCATGTCTACAAGAAATGAGGTGACTGTTAATGGAGCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp AGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGTCACTCAGCTGCAAAGGTGGTCTGCTaGAGGATGCAGGCAACTGTG +
Preference number: 2 (lower is better)
Translates to: RHPGPGCFLPRLFCCHSAAKVVC*RMQATV
Trigger: CACAGTTGCCTGCATCCTTCAGCAGACCACCTTTGC...AGCTGAGTGACAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp GGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCCCTGATGTGATGAAATaGATTCTTCTCTGGTCTCAA +
Preference number: 2 (lower is better)
Translates to: GLPLLACSACSLIEPKTTPDVMK*ILLWSQ
Trigger: TTGAGACCAGAGAAGAATTCATTTCATCACATCAGG...GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp GAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCTCTTCAATTTCTCAACAGTaGTCCATGAGTAACCAAGTC +
Preference number: 2 (lower is better)
Translates to: EQELMQRPWRDVLYWLASSISQQ*SMSNQV
Trigger: GACTTGGTTACTCATGGAGCACTGTTGAGAAATTGA...AGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp GAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCTCTGTATGGTGGAGATATTaGCATCCATATTCCACAAAG +
Preference number: 2 (lower is better)
Translates to: EQELMQRPWRDVLYWLASVWWRY*HPYSTK
Trigger: CTTTGTGGAATATGGATGGCAATATCTCCACCATAC...AGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp CTCAGGAAAGCCCATCTCTGTGAGCTGCCACAAGGCATTCTCATCCATTCGCTCGCAATGATCAAGGAATaGAGCCATCATTGCTTAGAC +
Preference number: 2 (lower is better)
Translates to: LRKAHLCELPQGILIHSLAMIKE*SHHCLD
Trigger: GTCTAAGCAATGATGGCTCCATTCCTTGATCATTGC...GAGCGAATGGATGAGAATGCCTTGTGGCAGCTCACAGAGATGGGCTTTCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCAATGTGGGCTCTAAGTaGATTGAACTGGTTTACTCA +
Preference number: 2 (lower is better)
Translates to: GLPLLACSACSLIEPKTTNVGSK*IELVYS
Trigger: TGAGTAAACCAGTTCAATCCACTTAGAGCCCACATT...GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGAGATGGGTCACATTCTTaGGGTCTTCTAAGCTCCCAT +
Preference number: 2 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRDGSHS*GLLSSH
Trigger: ATGGGAGCTTAGAAGACCCCAAGAATGTGACCCATC...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCTCTAAGACATCCTGGTCCTaGATGTTTTCTTCCAAGATT +
Preference number: 2 (lower is better)
Translates to: EQELMQRPWRDVLYWLASKTSWS*MFSSKI
Trigger: AATCTTGGAAGAAAACATCCAGGACCAGGATGTCTT...AGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCAATAACAAGACATCCTaGTCCTGGATGTTTTCTTCC +
Preference number: 2 (lower is better)
Translates to: GLPLLACSACSLIEPKTTNNKTS*SWMFSS
Trigger: GGAAGAAAACATCCAGGACCAGGATGTCTTGTTATT...GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GATATCCCCATAGATACTTGGATGCCTCTTATGTCCCAGTACTCTGTCTCTTCCTTCCGGAGTTCTGTCTaGAAGTCTCTCATGGTGGCC +
Preference number: 2 (lower is better)
Translates to: DIPIDTWMPLMSQYSVSSFRSSV*KSLMVA
Trigger: GGCCACCATGAGAGACTTCCAGACAGAACTCCGGAA...GGAAGAGACAGAGTACTGGGACATAAGAGGCATCCAAGTATCTATGGGGATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp GAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCTCTCTCCCAAATGTATCTTaGAACCAATTTCATCCTAGT +
Preference number: 2 (lower is better)
Translates to: EQELMQRPWRDVLYWLASLPNVS*NQFHPS
Trigger: ACTAGGATGAAATTGGTTTCAAGATACATTTGGGAG...AGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp GCACCATGTTTGAGGCAACTCTCCTTGAGCTTCTCCACCGATGTGCCCTCGGTCAATGATACAAACACTTaGAATGATCAAGGAATGGAG +
Preference number: 2 (lower is better)
Translates to: APCLRQLSLSFSTDVPSVNDTNT*NDQGME
Trigger: CTCCATTCCTTGATCATTGCAAGTGTTTGTATCATT...GACCGAGGGCACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp GAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCTCTCCTAACATGAAGGTCTaGTTTATTGGATCTTTGTCA +
Preference number: 2 (lower is better)
Translates to: EQELMQRPWRDVLYWLASPNMKV*FIGSLS
Trigger: TGACAAAGATCCAATAAAGCAGACCTTCATGTTAGG...AGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp GGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCCCTAACATGAAGGTCTaGTTTATTGGATCTTTGTCA +
Preference number: 2 (lower is better)
Translates to: GLPLLACSACSLIEPKTTPNMKV*FIGSLS
Trigger: TGACAAAGATCCAATAAAGCAGACCTTCATGTTAGG...GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp GGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCACCCTGGGGAGCATTTaGATAAAAGTTTCCTATTTT +
Preference number: 2 (lower is better)
Translates to: GLPLLACSACSLIEPKTTTLGSI*IKVSYF
Trigger: AAAATAGGAAACTTTTATGCAAATGCTCCCCAGGGT...GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GCACCATGTTTGAGGCAACTCTCCTTGAGCTTCTCCACCGATGTGCCCTCGGTCCCCATTATATATGGGTaGGCCAATGTTATTTTAGTA +
Preference number: 2 (lower is better)
Translates to: APCLRQLSLSFSTDVPSVPIIYG*ANVILV
Trigger: TACTAAAATAACATTGGCCCACCCATATATAATGGG...GACCGAGGGCACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp AGCAAATTGTGGCAGAATCATCCACAAGGTGAGCAGTCAATACGTATAAATGAAGGAAGTCTCTCATGGTaGCCTGGACAGCAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: SKLWQNHPQGEQSIRINEGSLSW*PGQQAG
Trigger: GCCTGCCTGCTGTCCAGGCCACCATGAGAGACTTCC...TTCATTTATACGTATTGACTGCTCACCTTGTGGATGATTCTGCCACAATTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp AGGGATTGGTATGTGCCCATAGGGTGGGTCTCAAGTTGGGCTTGTTATTGTTTGCAACAGAATTCTCCATaGCCTGAGGCACTGACATGT +
Preference number: 2 (lower is better)
Translates to: RDWYVPIGWVSSWACYCLQQNSP*PEALTC
Trigger: ACATGTCAGTGCCTCAGGCCATGGAGAATTCTGTTG...CAAACAATAACAAGCCCAACTTGAGACCCACCCTATGGGCACATACCAATCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp AGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGTCACTCAGCTCCTGCACAAACATCATaGCCAAGAAGCAGTTTGGGG +
Preference number: 2 (lower is better)
Translates to: RHPGPGCFLPRLFCCHSAPAQTS*PRSSLG
Trigger: CCCCAAACTGCTTCTTGGTCATGATGTTTGTGCAGG...AGCTGAGTGACAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGAAAAAGCATTGTCTCTTaGGCAGTCTACATTGACAGC +
Preference number: 2 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRKSIVS*AVYIDS
Trigger: GCTGTCAATGTAGACTGCTCAAGAGACAATGCTTTT...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGACAATTTTGTGAGGAATaGACATCCCTGATGTCAAGC +
Preference number: 2 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRQFCEE*TSLMSS
Trigger: GCTTGACATCAGGGATGTTCATTCCTCACAAAATTG...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp CTTGGGACCAAATATGAAGGCGAGGAGTGCTGTGCTGGAAGCCAAGATAGAGAATGTTGGGCTGACCAATaGAGTTCAAAGAACATAGGA +
Preference number: 2 (lower is better)
Translates to: LGTKYEGEECCAGSQDRECWADQ*SSKNIG
Trigger: TCCTATGTTCTTTGAACTTCATTGGTCAGCCCAACA...TTCTCTATCTTGGCTTCCAGCACAGCACTCCTCGCCTTCATATTTGGTCCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp ACTAGGGTACACATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGTGTACTTTGGAAATTaGTGGGGAATCTTAGGACAG +
Preference number: 2 (lower is better)
Translates to: TRVHMEGPMAPAVFIAQDVYFGN*WGILGQ
Trigger: CTGTCCTAAGATTCCCCAGCAATTTCCAAAGTACAC...ATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCATGTGTACCCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp GGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCCATGTCAATAACCTTTaGCCAATATTTCGCATTAGA +
Preference number: 2 (lower is better)
Translates to: GLPLLACSACSLIEPKTTHVNNL*PIFRIR
Trigger: TCTAATGCGAAATATTGGGCAAAGGTTATTGACATG...GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp GGCAAGAGCCATAGTGAAAGCAACTGCAAAGGTGGTCTGCTGAAGGATGCAGGCACCCTGGGGAGCATTTaGATAAAAGTTTCCTATTTT +
Preference number: 2 (lower is better)
Translates to: GKSHSESNCKGGLLKDAGTLGSI*IKVSYF
Trigger: AAAATAGGAAACTTTTATGCAAATGCTCCCCAGGGT...GCCTGCATCCTTCAGCAGACCACCTTTGCAGTTGCTTTCACTATGGCTCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCCTATGGATAATTGCCTaGATTTTAAGAAGAGCCTTT +
Preference number: 2 (lower is better)
Translates to: GLPLLACSACSLIEPKTTLWIIA*ILRRAF
Trigger: AAAGGCTCTTCTTAAAATCCAGGCAATTATCCATAG...GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCTCTCTATGGATAATTGCCTaGATTTTAAGAAGAGCCTTT +
Preference number: 2 (lower is better)
Translates to: EQELMQRPWRDVLYWLASLWIIA*ILRRAF
Trigger: AAAGGCTCTTCTTAAAATCCAGGCAATTATCCATAG...AGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GATATCCCCATAGATACTTGGATGCCTCTTATGTCCCAGTACTCTGTCTCTTCCCAACAGAATTCTCCATaGCCTGAGGCACTGACATGT +
Preference number: 2 (lower is better)
Translates to: DIPIDTWMPLMSQYSVSSQQNSP*PEALTC
Trigger: ACATGTCAGTGCCTCAGGCCATGGAGAATTCTGTTG...GGAAGAGACAGAGTACTGGGACATAAGAGGCATCCAAGTATCTATGGGGATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp AGGGATTGGTATGTGCCCATAGGGTGGGTCTCAAGTTGGGCTTGTTATTGTTTGATCCCCATAGATACTTaGATGCCTCTTATGTCCCAG +
Preference number: 2 (lower is better)
Translates to: RDWYVPIGWVSSWACYCLIPIDT*MPLMSQ
Trigger: CTGGGACATAAGAGGCATCCAAGTATCTATGGGGAT...CAAACAATAACAAGCCCAACTTGAGACCCACCCTATGGGCACATACCAATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 90 bp TGGTATGTGCCCATAGGGTGGGTCTCAAGTTGGGCTTGTTATTGTTaGACCATTCCCCTAGGATATGCTCCATTAACAGTCACCTCATTT +
Preference number: 2 (lower is better)
Translates to: WYVPIGWVSSWACYC*TIPLGYAPLTVTSF
Trigger: AAATGAGGTGACTGTTAATGGAGCATATCCTAGGGGAATGGTCAAACAATAACAAGCCCAACTTGAGACCCACCCTATGGGCACATACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp AGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGTCACTCAGCTTCTTCTAAGCTCCCATaGGCACCATGTTTGAGGCAA +
Preference number: 2 (lower is better)
Translates to: RHPGPGCFLPRLFCCHSASSKLP*APCLRQ
Trigger: TTGCCTCAAACATGGTGCTCATGGGAGCTTAGAAGA...AGCTGAGTGACAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp TGCATTAGTAAAGGTGACAATTTCCTAAAGAGAACACCGATGGCTCAGACTCTACAGCAGAAGGGCCTTTaGGGTTCTGCTCTCAGGAAA +
Preference number: 2 (lower is better)
Translates to: CISKGDNFLKRTPMAQTLQQKGL*GSALRK
Trigger: TTTCCTGAGAGCAGAACCTCAAAGGCCCTTCTGCTG...TAGAGTCTGAGCCATCGGTGTTCTCTTTAGGAAATTGTCACCTTTACTAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp GCTTTAAGTTCAAACAATATTTTGGTGGAAATCTTAGTTCATGTGTCCCCAGGAAGGAGGGAGAGGGTGTaGGTGTTGGTGAGCACAGTC +
Preference number: 2 (lower is better)
Translates to: ALSSNNILVEILVHVSPGRRERV*VLVSTV
Trigger: GACTGTGCTCACCAACACTCACACCCTCTCCCTCCT...TCCTGGGGACACATGAACTAAGATTTCCACCAAAATATTGTTTGAACTTAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp ACTAGGGTACACATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGAATTTGACAAAAGATaGAGTCCATGTGGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: TRVHMEGPMAPAVFIAQDEFDKR*SPCGRN
Trigger: ATTCCTGCCACATGGACTTCATCTTTTGTCAAATTC...ATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCATGTGTACCCTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp ATATGCTCCATTAACAGTCACCTCATTTCTTGTAGACATGAGCAATTTGGGGTTGCAAAGGTGGTCTGCTaGAGGATGCAGGCAACTGTG +
Preference number: 2 (lower is better)
Translates to: ICSINSHLISCRHEQFGVAKVVC*RMQATV
Trigger: CACAGTTGCCTGCATCCTTCAGCAGACCACCTTTGC...AACCCCAAATTGCTCATGTCTACAAGAAATGAGGTGACTGTTAATGGAGCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp ACTAGGGTACACATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATTCAATTTCTCAACAGTaGTCCATGAGTAACCAAGTC +
Preference number: 2 (lower is better)
Translates to: TRVHMEGPMAPAVFIAQDSISQQ*SMSNQV
Trigger: GACTTGGTTACTCATGGAGCACTGTTGAGAAATTGA...ATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCATGTGTACCCTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGAAAGACATCCTGGTCCTaGATGTTTTCTTCCAAGATT +
Preference number: 2 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRKTSWS*MFSSKI
Trigger: AATCTTGGAAGAAAACATCCAGGACCAGGATGTCTT...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp AGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGTCACTCAGCTCAACAGAATTCTCCATaGCCTGAGGCACTGACATGT +
Preference number: 2 (lower is better)
Translates to: RHPGPGCFLPRLFCCHSAQQNSP*PEALTC
Trigger: ACATGTCAGTGCCTCAGGCCATGGAGAATTCTGTTG...AGCTGAGTGACAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GATATCCCCATAGATACTTGGATGCCTCTTATGTCCCAGTACTCTGTCTCTTCCACAGGCAATAGCTTTTaGGATAGCTCCCACTTCACA +
Preference number: 2 (lower is better)
Translates to: DIPIDTWMPLMSQYSVSSTGNSF*DSSHFT
Trigger: TGTGAAGTGGGAGCTATCCCAAAAGCTATTGCCTGT...GGAAGAGACAGAGTACTGGGACATAAGAGGCATCCAAGTATCTATGGGGATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp AGCAAATTGTGGCAGAATCATCCACAAGGTGAGCAGTCAATACGTATAAATGAATATCCCAGGACAGAGTaGAAGGCAACAGCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: SKLWQNHPQGEQSIRINEYPRTE*KATAEP
Trigger: GGGCTCAGCTGTTGCCTTCCACTCTGTCCTGGGATA...TTCATTTATACGTATTGACTGCTCACCTTGTGGATGATTCTGCCACAATTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp GATATCCCCATAGATACTTGGATGCCTCTTATGTCCCAGTACTCTGTCTCTTCCAAAAGCATTGTCTCTTaGGCAGTCTACATTGACAGC +
Preference number: 2 (lower is better)
Translates to: DIPIDTWMPLMSQYSVSSKSIVS*AVYIDS
Trigger: GCTGTCAATGTAGACTGCTCAAGAGACAATGCTTTT...GGAAGAGACAGAGTACTGGGACATAAGAGGCATCCAAGTATCTATGGGGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp ATCAATAACAAGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGGAAAGCCCATCTCTGTaGGCTGCCACAAGGCATTCT +
Preference number: 2 (lower is better)
Translates to: INNKTSWSWMFSSKIVLLESPSL*AATRHS
Trigger: AGAATGCCTTGTGGCAGCTCACAGAGATGGGCTTTC...CAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCTTGTTATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp AGCAAATTGTGGCAGAATCATCCACAAGGTGAGCAGTCAATACGTATAAATGAACATGGCCTGAGGCACTaGCATGTGATTCAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: SKLWQNHPQGEQSIRINEHGLRH*HVIQQK
Trigger: CTTCTGCTGAATCACATGTCAGTGCCTCAGGCCATG...TTCATTTATACGTATTGACTGCTCACCTTGTGGATGATTCTGCCACAATTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp AACAGTTGTACTAGCTTTTTAACTTTCCCTCTTCCCATTATATATGGGTGGGCCGGGGTTCAATGTTCATaGCCCAGACATGCCATGTCA +
Preference number: 2 (lower is better)
Translates to: NSCTSFLTFPLPIIYGWAGVQCS*PRHAMS
Trigger: TGACATGGCATGTCTGGGTCATGAACATTGAACCCC...GGCCCACCCATATATAATGGGAAGAGGGAAAGTTAAAAAGCTAGTACAACTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGACAGAAAATGAGCACATaGAGAACAAATACCACATCT +
Preference number: 2 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRQKMST*RTNTTS
Trigger: AGATGTGGTATTTGTTCTTCATGTGCTCATTTTCTG...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp AGCAAATTGTGGCAGAATCATCCACAAGGTGAGCAGTCAATACGTATAAATGAACCAGGGTTACTTTCCTaGATCCAGGCCCACAACTCT +
Preference number: 2 (lower is better)
Translates to: SKLWQNHPQGEQSIRINEPGLLS*IQAHNS
Trigger: AGAGTTGTGGGCCTGGATTCAGGAAAGTAACCCTGG...TTCATTTATACGTATTGACTGCTCACCTTGTGGATGATTCTGCCACAATTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp CCATATTCCACAAAGAAGAAGTTGGATCAGGGTGCAGATAGGAATGATATAGTTCCAGGGTTACTTTCCTaGATCCAGGCCCACAACTCT +
Preference number: 2 (lower is better)
Translates to: PYSTKKKLDQGADRNDIVPGLLS*IQAHNS
Trigger: AGAGTTGTGGGCCTGGATTCAGGAAAGTAACCCTGG...AACTATATCATTCCTATCTGCACCCTGATCCAACTTCTTCTTTGTGGAATATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp CTTGGGACCAAATATGAAGGCGAGGAGTGCTGTGCTGGAAGCCAAGATAGAGAAAGAAATCTCATTGTCTaGACAGGGAGTACAATTGTA +
Preference number: 2 (lower is better)
Translates to: LGTKYEGEECCAGSQDRERNLIV*TGSTIV
Trigger: TACAATTGTACTCCCTGTGCAGACAATGAGATTTCT...TTCTCTATCTTGGCTTCCAGCACAGCACTCCTCGCCTTCATATTTGGTCCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGATCACCAGAGCAAATGTaGTTTTCTAACAAGGAAAAC +
Preference number: 2 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRSPEQM*FSNKEN
Trigger: GTTTTCCTTGTTAGAAAACCACATTTGCTCTGGTGA...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp ACTAGGGTACACATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGAAGGTCTGCTTTATTaGATCTTTGTCAAACAGTTG +
Preference number: 2 (lower is better)
Translates to: TRVHMEGPMAPAVFIAQDEGLLY*IFVKQL
Trigger: CAACTGTTTGACAAAGATCCAATAAAGCAGACCTTC...ATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCATGTGTACCCTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp TGCATTAGTAAAGGTGACAATTTCCTAAAGAGAACACCGATGGCTCAGACTCTAAGGGATGTTCTTTACTaGCTTGCCTCTCCTGGCTTG +
Preference number: 2 (lower is better)
Translates to: CISKGDNFLKRTPMAQTLRDVLY*LASPGL
Trigger: CAAGCCAGGAGAGGCAAGCCAGTAAAGAACATCCCT...TAGAGTCTGAGCCATCGGTGTTCTCTTTAGGAAATTGTCACCTTTACTAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp AGGGATTGGTATGTGCCCATAGGGTGGGTCTCAAGTTGGGCTTGTTATTGTTTGAAGACATCCTGGTCCTaGATGTTTTCTTCCAAGATT +
Preference number: 2 (lower is better)
Translates to: RDWYVPIGWVSSWACYCLKTSWS*MFSSKI
Trigger: AATCTTGGAAGAAAACATCCAGGACCAGGATGTCTT...CAAACAATAACAAGCCCAACTTGAGACCCACCCTATGGGCACATACCAATCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp AGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGTCACTCAGCTACAGGCAATAGCTTTTaGGATAGCTCCCACTTCACA +
Preference number: 2 (lower is better)
Translates to: RHPGPGCFLPRLFCCHSATGNSF*DSSHFT
Trigger: TGTGAAGTGGGAGCTATCCCAAAAGCTATTGCCTGT...AGCTGAGTGACAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp AGCAAATTGTGGCAGAATCATCCACAAGGTGAGCAGTCAATACGTATAAATGAAGGATCTTGCCGGGTGTaGTGGTGCATGCCTTTAATC +
Preference number: 2 (lower is better)
Translates to: SKLWQNHPQGEQSIRINEGSCRV*WCMPLI
Trigger: GATTAAAGGCATGCACCACCACACCCGGCAAGATCC...TTCATTTATACGTATTGACTGCTCACCTTGTGGATGATTCTGCCACAATTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 90 bp AATAACAAGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTaGCTGTCACTCAGCTCCCTTTCCGAAGCAGCATGTACTAGCTTA +
Preference number: 2 (lower is better)
Translates to: NNKTSWSWMFSSKIV*LSLSSLSEAACTSL
Trigger: TAAGCTAGTACATGCTGCTTCGGAAAGGGAGCTGAGTGACAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCTTGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTAGAAACAATGGCAAGTaGAAGAGATGTGTCCTTGGG +
Preference number: 2 (lower is better)
Translates to: WPLLEELHFCLNPFALVSRNNGK*KRCVLG
Trigger: CCCAAGGACACATCTCTTTCACTTGCCATTGTTTCT...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp AGCAAATTGTGGCAGAATCATCCACAAGGTGAGCAGTCAATACGTATAAATGAAGGGGTTCAATGTTCATaGCCCAGACATGCCATGTCA +
Preference number: 2 (lower is better)
Translates to: SKLWQNHPQGEQSIRINEGVQCS*PRHAMS
Trigger: TGACATGGCATGTCTGGGTCATGAACATTGAACCCC...TTCATTTATACGTATTGACTGCTCACCTTGTGGATGATTCTGCCACAATTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGAAATGATACAAACACTTaGAATGATCAAGGAATGGAG +
Preference number: 2 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRNDTNT*NDQGME
Trigger: CTCCATTCCTTGATCATTGCAAGTGTTTGTATCATT...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp ACTAGGGTACACATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATCTAAATGTAAATGCATaGAAGGGTAGTCAACTAACT +
Preference number: 2 (lower is better)
Translates to: TRVHMEGPMAPAVFIAQDLNVNA*KGSQLT
Trigger: AGTTAGTTGACTACCCTTGCATGCATTTACATTTAG...ATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCATGTGTACCCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp ATATGCTCCATTAACAGTCACCTCATTTCTTGTAGACATGAGCAATTTGGGGTTTGTTCTTTACTGGCTTaGCTCTCCTGGCTTGCTCAG +
Preference number: 2 (lower is better)
Translates to: ICSINSHLISCRHEQFGVCSLLA*LSWLAQ
Trigger: CTGAGCAAGCCAGGAGAGGCAAGCCAGTAAAGAACA...AACCCCAAATTGCTCATGTCTACAAGAAATGAGGTGACTGTTAATGGAGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTCATAGTGAAAGCAACTaGAAAGGTGGTCTGCTGAAG +
Preference number: 2 (lower is better)
Translates to: WPLLEELHFCLNPFALVSHSESN*KGGLLK
Trigger: CTTCAGCAGACCACCTTTGCAGTTGCTTTCACTATG...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGACCCATTATATATGGGTaGGCCAATGTTATTTTAGTA +
Preference number: 2 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRPIIYG*ANVILV
Trigger: TACTAAAATAACATTGGCCCACCCATATATAATGGG...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGACTATGGATAATTGCCTaGATTTTAAGAAGAGCCTTT +
Preference number: 2 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRLWIIA*ILRRAF
Trigger: AAAGGCTCTTCTTAAAATCCAGGCAATTATCCATAG...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp TGCATTAGTAAAGGTGACAATTTCCTAAAGAGAACACCGATGGCTCAGACTCTAGATGGGTCACATTCTTaGGGTCTTCTAAGCTCCCAT +
Preference number: 2 (lower is better)
Translates to: CISKGDNFLKRTPMAQTLDGSHS*GLLSSH
Trigger: ATGGGAGCTTAGAAGACCCCAAGAATGTGACCCATC...TAGAGTCTGAGCCATCGGTGTTCTCTTTAGGAAATTGTCACCTTTACTAATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GATATCCCCATAGATACTTGGATGCCTCTTATGTCCCAGTACTCTGTCTCTTCCAATAACAAGACATCCTaGTCCTGGATGTTTTCTTCC +
Preference number: 2 (lower is better)
Translates to: DIPIDTWMPLMSQYSVSSNNKTS*SWMFSS
Trigger: GGAAGAAAACATCCAGGACCAGGATGTCTTGTTATT...GGAAGAGACAGAGTACTGGGACATAAGAGGCATCCAAGTATCTATGGGGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GCTTTAAGTTCAAACAATATTTTGGTGGAAATCTTAGTTCATGTGTCCCCAGGATTCCGGAGTTCTGTCTaGAAGTCTCTCATGGTGGCC +
Preference number: 2 (lower is better)
Translates to: ALSSNNILVEILVHVSPGFRSSV*KSLMVA
Trigger: GGCCACCATGAGAGACTTCCAGACAGAACTCCGGAA...TCCTGGGGACACATGAACTAAGATTTCCACCAAAATATTGTTTGAACTTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp ACTAGGGTACACATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATTACTGTAGTAAAGTCTaGATGTGTTGTAGAGAAAAG +
Preference number: 2 (lower is better)
Translates to: TRVHMEGPMAPAVFIAQDYCSKV*MCCREK
Trigger: CTTTTCTCTACAACACATCCAGACTTTACTACAGTA...ATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCATGTGTACCCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp CATTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATGACCAAGAAGCAGTACAAACACTTGCAATaGTCAAGGAATGGAGCCATC +
Preference number: 2 (lower is better)
Translates to: HCLSQGFYSCTNIMTKKQYKHLQ*SRNGAI
Trigger: GATGGCTCCATTCCTTGATCATTGCAAGTGTTTGTA...CTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTCCCTTGATCACTAATTaGGGAAATGCCTTACAGTTG +
Preference number: 2 (lower is better)
Translates to: WPLLEELHFCLNPFALVSPLITN*GNALQL
Trigger: CAACTGTAAGGCATTTCCTCAATTAGTGATCAAGGG...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp CCCATATGTGGCTTAATGAACAACAATCTTTACCACTGCCTATTTTCATTCACTCCTGCACAAACATCATaGCCAAGAAGCAGTTTGGGG +
Preference number: 2 (lower is better)
Translates to: PICGLMNNNLYHCLFSFTPAQTS*PRSSLG
Trigger: CCCCAAACTGCTTCTTGGTCATGATGTTTGTGCAGG...AGTGAATGAAAATAGGCAGTGGTAAAGATTGTTGTTCATTAAGCCACATATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp ATCAATAACAAGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGGGTCTCCCTTCAGCATaGAACATGTGGAGATCTAGA +
Preference number: 2 (lower is better)
Translates to: INNKTSWSWMFSSKIVLLGLPSA*NMWRSR
Trigger: TCTAGATCTCCACATGTTGCATGCTGAAGGGAGACC...CAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCTTGTTATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp GCTTTAAGTTCAAACAATATTTTGGTGGAAATCTTAGTTCATGTGTCCCCAGGATGTTCTTTACTGGCTTaGCTCTCCTGGCTTGCTCAG +
Preference number: 2 (lower is better)
Translates to: ALSSNNILVEILVHVSPGCSLLA*LSWLAQ
Trigger: CTGAGCAAGCCAGGAGAGGCAAGCCAGTAAAGAACA...TCCTGGGGACACATGAACTAAGATTTCCACCAAAATATTGTTTGAACTTAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTCTTCCAAGATTGTTTTaGTGTCACTCAGCTCCCTTT +
Preference number: 2 (lower is better)
Translates to: WPLLEELHFCLNPFALVSLPRLF*CHSAPF
Trigger: AAAGGGAGCTGAGTGACAGCAAAACAATCTTGGAAG...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp ACTCAAATTTACTGTAGTAAAGTCTGGATGTGTTGTAGAGAAAAGCAATCCGAAGGGCCTTTGAGGTTCTaGTCTCAGGAAAGCCCATCT +
Preference number: 2 (lower is better)
Translates to: TQIYCSKVWMCCREKQSEGPLRF*SQESPS
Trigger: AGATGGGCTTTCCTGAGAGCAGAACCTCAAAGGCCC...TTCGGATTGCTTTTCTCTACAACACATCCAGACTTTACTACAGTAAATTTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GCTTTAAGTTCAAACAATATTTTGGTGGAAATCTTAGTTCATGTGTCCCCAGGAAGGGATGTTCTTTACTaGCTTGCCTCTCCTGGCTTG +
Preference number: 2 (lower is better)
Translates to: ALSSNNILVEILVHVSPGRDVLY*LASPGL
Trigger: CAAGCCAGGAGAGGCAAGCCAGTAAAGAACATCCCT...TCCTGGGGACACATGAACTAAGATTTCCACCAAAATATTGTTTGAACTTAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp ATCAATAACAAGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGGATGGGTCACATTCTTaGGGTCTTCTAAGCTCCCAT +
Preference number: 2 (lower is better)
Translates to: INNKTSWSWMFSSKIVLLDGSHS*GLLSSH
Trigger: ATGGGAGCTTAGAAGACCCCAAGAATGTGACCCATC...CAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCTTGTTATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp TGCATTAGTAAAGGTGACAATTTCCTAAAGAGAACACCGATGGCTCAGACTCTACTTGTTAGACATCAATaGGAGGAGAGGCTTCTAGTC +
Preference number: 2 (lower is better)
Translates to: CISKGDNFLKRTPMAQTLLVRHQ*EERLLV
Trigger: GACTAGAAGCCTCTCCTCCCATTGATGTCTAACAAG...TAGAGTCTGAGCCATCGGTGTTCTCTTTAGGAAATTGTCACCTTTACTAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp TGTTGTTGTCCCTATCACACTACTGTGTTTACTGTCTGGATACAGGAAGTAGAATACAAACACTTGCAATaGTCAAGGAATGGAGCCATC +
Preference number: 2 (lower is better)
Translates to: CCCPYHTTVFTVWIQEVEYKHLQ*SRNGAI
Trigger: GATGGCTCCATTCCTTGATCATTGCAAGTGTTTGTA...TTCTACTTCCTGTATCCAGACAGTAAACACAGTAGTGTGATAGGGACAACAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTTTGTTTCCATCTAGTTaGCCTGATCATCAGCCAAAT +
Preference number: 2 (lower is better)
Translates to: WPLLEELHFCLNPFALVSLFPSS*PDHQPN
Trigger: ATTTGGCTGATGATCAGGTCAACTAGATGGAAACAA...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp TGTTGTTGTCCCTATCACACTACTGTGTTTACTGTCTGGATACAGGAAGTAGAACAATTTTGTGAGGAATaGACATCCCTGATGTCAAGC +
Preference number: 2 (lower is better)
Translates to: CCCPYHTTVFTVWIQEVEQFCEE*TSLMSS
Trigger: GCTTGACATCAGGGATGTTCATTCCTCACAAAATTG...TTCTACTTCCTGTATCCAGACAGTAAACACAGTAGTGTGATAGGGACAACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp AACAGTTGTACTAGCTTTTTAACTTTCCCTCTTCCCATTATATATGGGTGGGCCTCCAGTCTAAACTGTTaGCTCTCACCTCAATATCCT +
Preference number: 2 (lower is better)
Translates to: NSCTSFLTFPLPIIYGWASSLNC*LSPQYP
Trigger: AGGATATTGAGGTGAGAGTCAACAGTTTAGACTGGA...GGCCCACCCATATATAATGGGAAGAGGGAAAGTTAAAAAGCTAGTACAACTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp AGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGTCACTCAGCTCTCCGTCTTGTTGACTaGTTCAAAGTTTACTTTGTT +
Preference number: 2 (lower is better)
Translates to: RHPGPGCFLPRLFCCHSALRLVD*FKVYFV
Trigger: AACAAAGTAAACTTTGAAGCAGTCAACAAGACGGAG...AGCTGAGTGACAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp ACTCAAATTTACTGTAGTAAAGTCTGGATGTGTTGTAGAGAAAAGCAATCCGAACAAGAAAGTCAGGACTaGAACTCAAGCAGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: TQIYCSKVWMCCREKQSEQESQD*NSSRAR
Trigger: CCTTGCCCTGCTTGAGTTCCAGTCCTGACTTTCTTG...TTCGGATTGCTTTTCTCTACAACACATCCAGACTTTACTACAGTAAATTTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GGATCTTTGTCAAACAGTTGTACTAGCTTTTTAACTTTCCCTCTTCCCATTATACAAGAAAGTCAGGACTaGAACTCAAGCAGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: GSLSNSCTSFLTFPLPIIQESQD*NSSRAR
Trigger: CCTTGCCCTGCTTGAGTTCCAGTCCTGACTTTCTTG...TATAATGGGAAGAGGGAAAGTTAAAAAGCTAGTACAACTGTTTGACAAAGATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp AGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGTCACTCAGCTATAGGTAGTGTACTTTaGAAATTGCTGGGGAATCTT +
Preference number: 2 (lower is better)
Translates to: RHPGPGCFLPRLFCCHSAIGSVL*KLLGNL
Trigger: AAGATTCCCCAGCAATTTCCAAAGTACACTACCTAT...AGCTGAGTGACAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTAATGTTCTGGTTCCCTaGCTCTTAAATATTCCTACC +
Preference number: 2 (lower is better)
Translates to: WPLLEELHFCLNPFALVSNVLVP*LLNIPT
Trigger: GGTAGGAATATTTAAGAGCCAGGGAACCAGAACATT...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp TTCATTATTGTTATTATTTCCCCCTCAATAATCCTTCCCCCTATACTCCCTACCATCCCCATAGATACTTaGATGCCTCTTATGTCCCAG +
Preference number: 2 (lower is better)
Translates to: FIIVIISPSIILPPILPTIPIDT*MPLMSQ
Trigger: CTGGGACATAAGAGGCATCCAAGTATCTATGGGGAT...GGTAGGGAGTATAGGGGGAAGGATTATTGAGGGGGAAATAATAACAATAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp AGCAAATTGTGGCAGAATCATCCACAAGGTGAGCAGTCAATACGTATAAATGAAACAGGCAATAGCTTTTaGGATAGCTCCCACTTCACA +
Preference number: 2 (lower is better)
Translates to: SKLWQNHPQGEQSIRINETGNSF*DSSHFT
Trigger: TGTGAAGTGGGAGCTATCCCAAAAGCTATTGCCTGT...TTCATTTATACGTATTGACTGCTCACCTTGTGGATGATTCTGCCACAATTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GCTTTAAGTTCAAACAATATTTTGGTGGAAATCTTAGTTCATGTGTCCCCAGGATTTAATCCCAGCACTTaGGAGACAGAGGTGGGCAAA +
Preference number: 2 (lower is better)
Translates to: ALSSNNILVEILVHVSPGFNPST*ETEVGK
Trigger: TTTGCCCACCTCTGTCTCCCAAGTGCTGGGATTAAA...TCCTGGGGACACATGAACTAAGATTTCCACCAAAATATTGTTTGAACTTAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp ATATGCTCCATTAACAGTCACCTCATTTCTTGTAGACATGAGCAATTTGGGGTTTACAAACACTTGCAATaGTCAAGGAATGGAGCCATC +
Preference number: 2 (lower is better)
Translates to: ICSINSHLISCRHEQFGVYKHLQ*SRNGAI
Trigger: GATGGCTCCATTCCTTGATCATTGCAAGTGTTTGTA...AACCCCAAATTGCTCATGTCTACAAGAAATGAGGTGACTGTTAATGGAGCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp CCCATATGTGGCTTAATGAACAACAATCTTTACCACTGCCTATTTTCATTCACTCCAGCTGTGTCAAATTaGCACAAAACTAGCCACTAC +
Preference number: 2 (lower is better)
Translates to: PICGLMNNNLYHCLFSFTPAVSN*HKTSHY
Trigger: GTAGTGGCTAGTTTTGTGTCAATTTGACACAGCTGG...AGTGAATGAAAATAGGCAGTGGTAAAGATTGTTGTTCATTAAGCCACATATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp CCCATATGTGGCTTAATGAACAACAATCTTTACCACTGCCTATTTTCATTCACTGGGTCCTTTTCCCCTTaGTCACTAATTGAGGAAATG +
Preference number: 2 (lower is better)
Translates to: PICGLMNNNLYHCLFSFTGSFSP*SLIEEM
Trigger: CATTTCCTCAATTAGTGATCAAGGGGAAAAGGACCC...AGTGAATGAAAATAGGCAGTGGTAAAGATTGTTGTTCATTAAGCCACATATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTCTCCCAAATGTATCTTaGAACCAATTTCATCCTAGT +
Preference number: 2 (lower is better)
Translates to: WPLLEELHFCLNPFALVSLPNVS*NQFHPS
Trigger: ACTAGGATGAAATTGGTTTCAAGATACATTTGGGAG...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp TGCATTAGTAAAGGTGACAATTTCCTAAAGAGAACACCGATGGCTCAGACTCTAGGGTTGAAATTTAGGTaGGTTTGTTGTTGTCCCTAT +
Preference number: 2 (lower is better)
Translates to: CISKGDNFLKRTPMAQTLGLKFR*VCCCPY
Trigger: ATAGGGACAACAACAAACTCACCTAAATTTCAACCC...TAGAGTCTGAGCCATCGGTGTTCTCTTTAGGAAATTGTCACCTTTACTAATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp CATTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATGACCAAGAAGCAGCAAGACCACCTAAAATaGACCATCAAAGAAACAATG +
Preference number: 2 (lower is better)
Translates to: HCLSQGFYSCTNIMTKKQQDHLK*TIKETM
Trigger: CATTGTTTCTTTGATGGTTCATTTTAGGTGGTCTTG...CTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp TGTTGTTGTCCCTATCACACTACTGTGTTTACTGTCTGGATACAGGAAGTAGAAGAATTTGACAAAAGATaGAGTCCATGTGGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: CCCPYHTTVFTVWIQEVEEFDKR*SPCGRN
Trigger: ATTCCTGCCACATGGACTTCATCTTTTGTCAAATTC...TTCTACTTCCTGTATCCAGACAGTAAACACAGTAGTGTGATAGGGACAACAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTCAGAAAATGAGCACATaGAGAACAAATACCACATCT +
Preference number: 2 (lower is better)
Translates to: WPLLEELHFCLNPFALVSQKMST*RTNTTS
Trigger: AGATGTGGTATTTGTTCTTCATGTGCTCATTTTCTG...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp AGCAAATTGTGGCAGAATCATCCACAAGGTGAGCAGTCAATACGTATAAATGAATGCTCTCTTCACTCATaGCCACATCAAATATCTGAC +
Preference number: 2 (lower is better)
Translates to: SKLWQNHPQGEQSIRINECSLHS*PHQISD
Trigger: GTCAGATATTTGATGTGGTCATGAGTGAAGAGAGCA...TTCATTTATACGTATTGACTGCTCACCTTGTGGATGATTCTGCCACAATTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp ATCAATAACAAGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGTGTTGGGCTGACCAATaGAGTTCAAAGAACATAGGA +
Preference number: 2 (lower is better)
Translates to: INNKTSWSWMFSSKIVLLCWADQ*SSKNIG
Trigger: TCCTATGTTCTTTGAACTTCATTGGTCAGCCCAACA...CAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCTTGTTATTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp AGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGTCACTCAGCTCATGTCAATAACCTTTaGCCAATATTTCGCATTAGA +
Preference number: 2 (lower is better)
Translates to: RHPGPGCFLPRLFCCHSAHVNNL*PIFRIR
Trigger: TCTAATGCGAAATATTGGGCAAAGGTTATTGACATG...AGCTGAGTGACAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp AACAGTTGTACTAGCTTTTTAACTTTCCCTCTTCCCATTATATATGGGTGGGCCGCTCTTCTCTGTATTTaGATAATGACTCTCTGGACA +
Preference number: 2 (lower is better)
Translates to: NSCTSFLTFPLPIIYGWAALLCI*IMTLWT
Trigger: TGTCCAGAGAGTCATTATGCAAATACAGAGAAGAGC...GGCCCACCCATATATAATGGGAAGAGGGAAAGTTAAAAAGCTAGTACAACTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTTCACCAGAGCAAATGTaGTTTTCTAACAAGGAAAAC +
Preference number: 2 (lower is better)
Translates to: WPLLEELHFCLNPFALVSSPEQM*FSNKEN
Trigger: GTTTTCCTTGTTAGAAAACCACATTTGCTCTGGTGA...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp TGTTGTTGTCCCTATCACACTACTGTGTTTACTGTCTGGATACAGGAAGTAGAAAATAACAAGACATCCTaGTCCTGGATGTTTTCTTCC +
Preference number: 2 (lower is better)
Translates to: CCCPYHTTVFTVWIQEVENNKTS*SWMFSS
Trigger: GGAAGAAAACATCCAGGACCAGGATGTCTTGTTATT...TTCTACTTCCTGTATCCAGACAGTAAACACAGTAGTGTGATAGGGACAACAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp AGCAAATTGTGGCAGAATCATCCACAAGGTGAGCAGTCAATACGTATAAATGAACCCACTTCACATGTTTaGGACAAAAATAGAGACCCA +
Preference number: 2 (lower is better)
Translates to: SKLWQNHPQGEQSIRINEPTSHV*DKNRDP
Trigger: TGGGTCTCTATTTTTGTCCCAAACATGTGAAGTGGG...TTCATTTATACGTATTGACTGCTCACCTTGTGGATGATTCTGCCACAATTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp CCATATTCCACAAAGAAGAAGTTGGATCAGGGTGCAGATAGGAATGATATAGTTAGTATTAAGCTGCCATaGAAAGAACTCCATCCCTTC +
Preference number: 2 (lower is better)
Translates to: PYSTKKKLDQGADRNDIVSIKLP*KELHPF
Trigger: GAAGGGATGGAGTTCTTTCCATGGCAGCTTAATACT...AACTATATCATTCCTATCTGCACCCTGATCCAACTTCTTCTTTGTGGAATATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTTTGGTCAATGTATGGTaGAGATATTGCCATCCATAT +
Preference number: 2 (lower is better)
Translates to: WPLLEELHFCLNPFALVSLVNVW*RYCHPY
Trigger: ATATGGATGGCAATATCTCCACCATACATTGACCAA...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 90 bp AGAAATGATACAAACACTTGCAATGATCAAGGAATGGAGCCATCATaGCTTAGACACAGAAAAGTAGGATCACCAGAGCAAATGTGGTTT +
Preference number: 2 (lower is better)
Translates to: RNDTNTCNDQGMEPS*LRHRKVGSPEQMWF
Trigger: AAACCACATTTGCTCTGGTGATCCTACTTTTCTGTGTCTAAGCAATGATGGCTCCATTCCTTGATCATTGCAAGTGTTTGTATCATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 90 bp AGAATGTCATATTCAGCATCTATTCTCTGTCTCCAGTCTAAACTGTaGACTCTCACCTCAATATCCTTCAGGAAAGTATTAAGCTGCCAT +
Preference number: 2 (lower is better)
Translates to: RMSYSASILCLQSKL*TLTSISFRKVLSCH
Trigger: ATGGCAGCTTAATACTTTCCTGAAGGATATTGAGGTGAGAGTCAACAGTTTAGACTGGAGACAGAGAATAGATGCTGAATATGACATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 90 bp CTTGTTGCACAAAATGATGATGTGACCATGTTCAATATGAGCATCTaGGTCAATGTATGGTGGAGATATTGCCATCCATATTCCACAAAG +
Preference number: 2 (lower is better)
Translates to: LVAQNDDVTMFNMSI*VNVWWRYCHPYSTK
Trigger: CTTTGTGGAATATGGATGGCAATATCTCCACCATACATTGACCAAGATGCTCATATTGAACATGGTCACATCATCATTTTGTGCAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 90 bp GTGATCCAGACACAGAAGAATACCAGCATACTTAGTGAGATAAATTaGGATTCGTTGAATGTATCAGGCAAATTTCTTGACAAGAAGGCC +
Preference number: 2 (lower is better)
Translates to: VIQTQKNTSILSEIN*DSLNVSGKFLDKKA
Trigger: GGCCTTCTTGTCAAGAAATTTGCCTGATACATTCAACGAATCCAAATTTATCTCACTAAGTATGCTGGTATTCTTCTGTGTCTGGATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp CCCATATGTGGCTTAATGAACAACAATCTTTACCACTGCCTATTTTCATTCACTCCCTTGATCACTAATTaGGGAAATGCCTTACAGTTG +
Preference number: 2 (lower is better)
Translates to: PICGLMNNNLYHCLFSFTPLITN*GNALQL
Trigger: CAACTGTAAGGCATTTCCTCAATTAGTGATCAAGGG...AGTGAATGAAAATAGGCAGTGGTAAAGATTGTTGTTCATTAAGCCACATATGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp TTCATTATTGTTATTATTTCCCCCTCAATAATCCTTCCCCCTATACTCCCTACCGGGTTGAAATTTAGGTaGGTTTGTTGTTGTCCCTAT +
Preference number: 2 (lower is better)
Translates to: FIIVIISPSIILPPILPTGLKFR*VCCCPY
Trigger: ATAGGGACAACAACAAACTCACCTAAATTTCAACCC...GGTAGGGAGTATAGGGGGAAGGATTATTGAGGGGGAAATAATAACAATAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTTACACTATGGATAATTaGCTGGATTTTAAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: WPLLEELHFCLNPFALVSYTMDN*LDFKKS
Trigger: GCTCTTCTTAAAATCCAGGCAATTATCCATAGTGTA...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp ATATGCTCCATTAACAGTCACCTCATTTCTTGTAGACATGAGCAATTTGGGGTTGCTCTTCTCTGTATTTaGATAATGACTCTCTGGACA +
Preference number: 2 (lower is better)
Translates to: ICSINSHLISCRHEQFGVALLCI*IMTLWT
Trigger: TGTCCAGAGAGTCATTATGCAAATACAGAGAAGAGC...AACCCCAAATTGCTCATGTCTACAAGAAATGAGGTGACTGTTAATGGAGCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp AGCAAATTGTGGCAGAATCATCCACAAGGTGAGCAGTCAATACGTATAAATGAAGTATGGTGGAGATATTaGCATCCATATTCCACAAAG +
Preference number: 2 (lower is better)
Translates to: SKLWQNHPQGEQSIRINEVWWRY*HPYSTK
Trigger: CTTTGTGGAATATGGATGGCAATATCTCCACCATAC...TTCATTTATACGTATTGACTGCTCACCTTGTGGATGATTCTGCCACAATTTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp ATCAATAACAAGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGAATGTGGGCTCTAAGTaGATTGAACTGGTTTACTCA +
Preference number: 2 (lower is better)
Translates to: INNKTSWSWMFSSKIVLLNVGSK*IELVYS
Trigger: TGAGTAAACCAGTTCAATCCACTTAGAGCCCACATT...CAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCTTGTTATTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp GCTTTAAGTTCAAACAATATTTTGGTGGAAATCTTAGTTCATGTGTCCCCAGGATTGAGCAGTCTACATTaGCAGCAGCATGTATGTATT +
Preference number: 2 (lower is better)
Translates to: ALSSNNILVEILVHVSPGLSSLH*QQHVCI
Trigger: AATACATACATGCTGCTGTCAATGTAGACTGCTCAA...TCCTGGGGACACATGAACTAAGATTTCCACCAAAATATTGTTTGAACTTAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp CCCATATGTGGCTTAATGAACAACAATCTTTACCACTGCCTATTTTCATTCACTTTGAGCAGTCTACATTaGCAGCAGCATGTATGTATT +
Preference number: 2 (lower is better)
Translates to: PICGLMNNNLYHCLFSFTLSSLH*QQHVCI
Trigger: AATACATACATGCTGCTGTCAATGTAGACTGCTCAA...AGTGAATGAAAATAGGCAGTGGTAAAGATTGTTGTTCATTAAGCCACATATGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp GGATCTTTGTCAAACAGTTGTACTAGCTTTTTAACTTTCCCTCTTCCCATTATAAAAAGCATTGTCTCTTaGGCAGTCTACATTGACAGC +
Preference number: 2 (lower is better)
Translates to: GSLSNSCTSFLTFPLPIIKSIVS*AVYIDS
Trigger: GCTGTCAATGTAGACTGCTCAAGAGACAATGCTTTT...TATAATGGGAAGAGGGAAAGTTAAAAAGCTAGTACAACTGTTTGACAAAGATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp AGCAAATTGTGGCAGAATCATCCACAAGGTGAGCAGTCAATACGTATAAATGAAACAAATGGTACGCTTTaGACTGTAAGTCTACATGTA +
Preference number: 2 (lower is better)
Translates to: SKLWQNHPQGEQSIRINETNGTL*TVSLHV
Trigger: TACATGTAGACTTACAGTTCAAAGCGTACCATTTGT...TTCATTTATACGTATTGACTGCTCACCTTGTGGATGATTCTGCCACAATTTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp AGCAAATTGTGGCAGAATCATCCACAAGGTGAGCAGTCAATACGTATAAATGAATTCCCTCACTTTCTATaGTGTGACAAATTGACAACA +
Preference number: 2 (lower is better)
Translates to: SKLWQNHPQGEQSIRINEFPHFL*CDKLTT
Trigger: TGTTGTCAATTTGTCACATCATAGAAAGTGAGGGAA...TTCATTTATACGTATTGACTGCTCACCTTGTGGATGATTCTGCCACAATTTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp CAGAAAGCTCACAGACTTTTGATAGCAGTTGCTCTTCTCTGTATTTGCATAATGCAAGACCACCTAAAATaGACCATCAAAGAAACAATG +
Preference number: 2 (lower is better)
Translates to: QKAHRLLIAVALLCICIMQDHLK*TIKETM
Trigger: CATTGTTTCTTTGATGGTTCATTTTAGGTGGTCTTG...CATTATGCAAATACAGAGAAGAGCAACTGCTATCAAAAGTCTGTGAGCTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp GGATCTTTGTCAAACAGTTGTACTAGCTTTTTAACTTTCCCTCTTCCCATTATATGCTCTCTTCACTCATaGCCACATCAAATATCTGAC +
Preference number: 2 (lower is better)
Translates to: GSLSNSCTSFLTFPLPIICSLHS*PHQISD
Trigger: GTCAGATATTTGATGTGGTCATGAGTGAAGAGAGCA...TATAATGGGAAGAGGGAAAGTTAAAAAGCTAGTACAACTGTTTGACAAAGATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp GGATCTTTGTCAAACAGTTGTACTAGCTTTTTAACTTTCCCTCTTCCCATTATATCCAGTCTAAACTGTTaGCTCTCACCTCAATATCCT +
Preference number: 2 (lower is better)
Translates to: GSLSNSCTSFLTFPLPIISSLNC*LSPQYP
Trigger: AGGATATTGAGGTGAGAGTCAACAGTTTAGACTGGA...TATAATGGGAAGAGGGAAAGTTAAAAAGCTAGTACAACTGTTTGACAAAGATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp ATCAATAACAAGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGGGAAGGTGGAATAGATaGTTCTTAAGAAATTTCCCA +
Preference number: 2 (lower is better)
Translates to: INNKTSWSWMFSSKIVLLGRWNR*FLRNFP
Trigger: TGGGAAATTTCTTAAGAAGCATCTATTCCACCTTCC...CAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCTTGTTATTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp GGATCTTTGTCAAACAGTTGTACTAGCTTTTTAACTTTCCCTCTTCCCATTATACTTCCAAGATTGTTTTaGTGTCACTCAGCTCCCTTT +
Preference number: 2 (lower is better)
Translates to: GSLSNSCTSFLTFPLPIILPRLF*CHSAPF
Trigger: AAAGGGAGCTGAGTGACAGCAAAACAATCTTGGAAG...TATAATGGGAAGAGGGAAAGTTAAAAAGCTAGTACAACTGTTTGACAAAGATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp TTCATTATTGTTATTATTTCCCCCTCAATAATCCTTCCCCCTATACTCCCTACCAGAAATCTCATTGTCTaGACAGGGAGTACAATTGTA +
Preference number: 2 (lower is better)
Translates to: FIIVIISPSIILPPILPTRNLIV*TGSTIV
Trigger: TACAATTGTACTCCCTGTGCAGACAATGAGATTTCT...GGTAGGGAGTATAGGGGGAAGGATTATTGAGGGGGAAATAATAACAATAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp ATATGCTCCATTAACAGTCACCTCATTTCTTGTAGACATGAGCAATTTGGGGTTGAAATGCCTTACAGTTaGATCTCATGGAGTAATTTC +
Preference number: 2 (lower is better)
Translates to: ICSINSHLISCRHEQFGVEMPYS*ISWSNF
Trigger: GAAATTACTCCATGAGATCCAACTGTAAGGCATTTC...AACCCCAAATTGCTCATGTCTACAAGAAATGAGGTGACTGTTAATGGAGCATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp AGCAAATTGTGGCAGAATCATCCACAAGGTGAGCAGTCAATACGTATAAATGAAATAGGTAGTGTACTTTaGAAATTGCTGGGGAATCTT +
Preference number: 2 (lower is better)
Translates to: SKLWQNHPQGEQSIRINEIGSVL*KLLGNL
Trigger: AAGATTCCCCAGCAATTTCCAAAGTACACTACCTAT...TTCATTTATACGTATTGACTGCTCACCTTGTGGATGATTCTGCCACAATTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp TGTTGTTGTCCCTATCACACTACTGTGTTTACTGTCTGGATACAGGAAGTAGAAATGAATTTGTATCAGTaGCCCAGAAATAAATCCACA +
Preference number: 2 (lower is better)
Translates to: CCCPYHTTVFTVWIQEVEMNLYQ*PRNKST
Trigger: TGTGGATTTATTTCTGGGCCACTGATACAAATTCAT...TTCTACTTCCTGTATCCAGACAGTAAACACAGTAGTGTGATAGGGACAACAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GGATCTTTGTCAAACAGTTGTACTAGCTTTTTAACTTTCCCTCTTCCCATTATAAGTATTAAGCTGCCATaGAAAGAACTCCATCCCTTC +
Preference number: 2 (lower is better)
Translates to: GSLSNSCTSFLTFPLPIISIKLP*KELHPF
Trigger: GAAGGGATGGAGTTCTTTCCATGGCAGCTTAATACT...TATAATGGGAAGAGGGAAAGTTAAAAAGCTAGTACAACTGTTTGACAAAGATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR TCA 90 bp GGATCTTTGTCAAACAGTTGTACTAGCTTTTTAACTTTCCCTCTTCCCATTATACCTGATGTGATGAAATaGATTCTTCTCTGGTCTCAA +
Preference number: 2 (lower is better)
Translates to: GSLSNSCTSFLTFPLPIIPDVMK*ILLWSQ
Trigger: TTGAGACCAGAGAAGAATTCATTTCATCACATCAGG...TATAATGGGAAGAGGGAAAGTTAAAAAGCTAGTACAACTGTTTGACAAAGATCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp CAGAAAGCTCACAGACTTTTGATAGCAGTTGCTCTTCTCTGTATTTGCATAATGAATGATACAAACACTTaGAATGATCAAGGAATGGAG +
Preference number: 2 (lower is better)
Translates to: QKAHRLLIAVALLCICIMNDTNT*NDQGME
Trigger: CTCCATTCCTTGATCATTGCAAGTGTTTGTATCATT...CATTATGCAAATACAGAGAAGAGCAACTGCTATCAAAAGTCTGTGAGCTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp AGCAAATTGTGGCAGAATCATCCACAAGGTGAGCAGTCAATACGTATAAATGAATACACTATGGATAATTaGCTGGATTTTAAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: SKLWQNHPQGEQSIRINEYTMDN*LDFKKS
Trigger: GCTCTTCTTAAAATCCAGGCAATTATCCATAGTGTA...TTCATTTATACGTATTGACTGCTCACCTTGTGGATGATTCTGCCACAATTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp GCTTTAAGTTCAAACAATATTTTGGTGGAAATCTTAGTTCATGTGTCCCCAGGATCACCAGAGCAAATGTaGTTTTCTAACAAGGAAAAC +
Preference number: 2 (lower is better)
Translates to: ALSSNNILVEILVHVSPGSPEQM*FSNKEN
Trigger: GTTTTCCTTGTTAGAAAACCACATTTGCTCTGGTGA...TCCTGGGGACACATGAACTAAGATTTCCACCAAAATATTGTTTGAACTTAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp CCCATATGTGGCTTAATGAACAACAATCTTTACCACTGCCTATTTTCATTCACTGAAATGCCTTACAGTTaGATCTCATGGAGTAATTTC +
Preference number: 2 (lower is better)
Translates to: PICGLMNNNLYHCLFSFTEMPYS*ISWSNF
Trigger: GAAATTACTCCATGAGATCCAACTGTAAGGCATTTC...AGTGAATGAAAATAGGCAGTGGTAAAGATTGTTGTTCATTAAGCCACATATGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp GGATCTTTGTCAAACAGTTGTACTAGCTTTTTAACTTTCCCTCTTCCCATTATAGGAAGGTGGAATAGATaGTTCTTAAGAAATTTCCCA +
Preference number: 2 (lower is better)
Translates to: GSLSNSCTSFLTFPLPIIGRWNR*FLRNFP
Trigger: TGGGAAATTTCTTAAGAAGCATCTATTCCACCTTCC...TATAATGGGAAGAGGGAAAGTTAAAAAGCTAGTACAACTGTTTGACAAAGATCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp GCTTTAAGTTCAAACAATATTTTGGTGGAAATCTTAGTTCATGTGTCCCCAGGATACACTATGGATAATTaGCTGGATTTTAAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: ALSSNNILVEILVHVSPGYTMDN*LDFKKS
Trigger: GCTCTTCTTAAAATCCAGGCAATTATCCATAGTGTA...TCCTGGGGACACATGAACTAAGATTTCCACCAAAATATTGTTTGAACTTAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CCA 90 bp ACTCAAATTTACTGTAGTAAAGTCTGGATGTGTTGTAGAGAAAAGCAATCCGAAATAGGTAGTGTACTTTaGAAATTGCTGGGGAATCTT +
Preference number: 2 (lower is better)
Translates to: TQIYCSKVWMCCREKQSEIGSVL*KLLGNL
Trigger: AAGATTCCCCAGCAATTTCCAAAGTACACTACCTAT...TTCGGATTGCTTTTCTCTACAACACATCCAGACTTTACTACAGTAAATTTGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp GGATCTTTGTCAAACAGTTGTACTAGCTTTTTAACTTTCCCTCTTCCCATTATACTAAATGTAAATGCATaGAAGGGTAGTCAACTAACT +
Preference number: 2 (lower is better)
Translates to: GSLSNSCTSFLTFPLPIILNVNA*KGSQLT
Trigger: AGTTAGTTGACTACCCTTGCATGCATTTACATTTAG...TATAATGGGAAGAGGGAAAGTTAAAAAGCTAGTACAACTGTTTGACAAAGATCC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR GCA 90 bp GGATCTTTGTCAAACAGTTGTACTAGCTTTTTAACTTTCCCTCTTCCCATTATAACTTTTGATAGCAGTTaGTCTTCTCTGTATTTGCAT +
Preference number: 2 (lower is better)
Translates to: GSLSNSCTSFLTFPLPIITFDSS*SSLYLH
Trigger: ATGCAAATACAGAGAAGAGCAACTGCTATCAAAAGT...TATAATGGGAAGAGGGAAAGTTAAAAAGCTAGTACAACTGTTTGACAAAGATCC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CCA 72 bp TTCCGGAGTTCTGTCTGGAAGTCTCTCATGGTGGCCTaGACAGCAGGCAGGCAGGTTGGCCGTTGCTCGAAG +
Preference number: 3 (lower is better)
Translates to: FRSSVWKSLMVA*TAGRQVGRCSK
Trigger: CTTCGAGCAACGGCCAACCTGCCTGCCTGCTGTCCAGGCCACCATGAGAGACTTCCAGACAGAACTCCGGAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CCA 72 bp GGATCTTCCGGAGTTCTGTCTGGAAGTCTCTCATGGTaGCCTGGACAGCAGGCAGGCAGGTTGGCCGTTGCT +
Preference number: 3 (lower is better)
Translates to: GSSGVLSGSLSW*PGQQAGRLAVA
Trigger: AGCAACGGCCAACCTGCCTGCCTGCTGTCCAGGCCACCATGAGAGACTTCCAGACAGAACTCCGGAAGATCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp ACTAGGGTACACATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATCCGTGTTCTAGTTCATaGGCCGCCGCCGCCCCGCCC +
Preference number: 3 (lower is better)
Translates to: TRVHMEGPMAPAVFIAQDPCSSS*AAAAPP
Trigger: GGGCGGGGCGGCGGCGGCCAATGAACTAGAACACGG...ATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCATGTGTACCCTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CCA 72 bp GAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTaGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCT +
Preference number: 3 (lower is better)
Translates to: ELMQRPWRDVLY*LASPGLLSLLS
Trigger: AGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp TCCACCGATGTGCCCTCGGTCATCTCCTTCAGCCACTCAGCCAGCACCATAGGCAGCTCCATCTATGGTTaGGCTGTGGATGTCTACATC +
Preference number: 3 (lower is better)
Translates to: STDVPSVISFSHSASTIGSSIYG*AVDVYI
Trigger: GATGTAGACATCCACAGCCAAACCATAGATGGAGCT...GCCTATGGTGCTGGCTGAGTGGCTGAAGGAGATGACCGAGGGCACATCGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp TGTTGTTGTCCCTATCACACTACTGTGTTTACTGTCTGGATACAGGAAGTAGAAGTCAGCTCGGCCGCCTaGCCCCTCGCTGCCACTGCC +
Preference number: 3 (lower is better)
Translates to: CCCPYHTTVFTVWIQEVEVSSAA*PLAATA
Trigger: GGCAGTGGCAGCGAGGGGCAAGGCGGCCGAGCTGAC...TTCTACTTCCTGTATCCAGACAGTAAACACAGTAGTGTGATAGGGACAACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTCCGTGTTCTAGTTCATaGGCCGCCGCCGCCCCGCCC +
Preference number: 3 (lower is better)
Translates to: WPLLEELHFCLNPFALVSPCSSS*AAAAPP
Trigger: GGGCGGGGCGGCGGCGGCCAATGAACTAGAACACGG...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp GAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCTCTTCAGCAGAAGGGCCTTaGAGGTTCTGCTCTCAGGAA +
Preference number: 3 (lower is better)
Translates to: EQELMQRPWRDVLYWLASSAEGP*RFCSQE
Trigger: TTCCTGAGAGCAGAACCTCAAAGGCCCTTCTGCTGA...AGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CCA 72 bp GTCTCTCATGGTGGCCTGGACAGCAGGCAGGCAGGTTaGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAAT +
Preference number: 3 (lower is better)
Translates to: VSHGGLDSRQAG*PLLEELHFCLN
Trigger: ATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCAACCTGCCTGCCTGCTGTCCAGGCCACCATGAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 72 bp CAGGATTCAGGGCTAACAGCTTCTGTGCCATCTCAGTaGGAGACACGAGGATCTTCCGGAGTTCTGTCTGGA +
Preference number: 3 (lower is better)
Translates to: QDSGLTASVPSQ*ETRGSSGVLSG
Trigger: TCCAGACAGAACTCCGGAAGATCCTCGTGTCTCTCACTGAGATGGCACAGAAGCTGTTAGCCCTGAATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 72 bp GAGGTTCTGCTCTCAGGAAAGCCCATCTCTGTGAGCTaGCACAAGGCATTCTCATCCATTCGCTCATCCTCA +
Preference number: 3 (lower is better)
Translates to: EVLLSGKPISVS*HKAFSSIRSSS
Trigger: TGAGGATGAGCGAATGGATGAGAATGCCTTGTGGCAGCTCACAGAGATGGGCTTTCCTGAGAGCAGAACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 72 bp GGCCAACACAGTGGCAAGAGCCATAGTGAAAGCAACTaGAAAGGTGGTCTGCTGAAGGATGCAGGCAACTGT +
Preference number: 3 (lower is better)
Translates to: GQHSGKSHSESN*KGGLLKDAGNC
Trigger: ACAGTTGCCTGCATCCTTCAGCAGACCACCTTTGCAGTTGCTTTCACTATGGCTCTTGCCACTGTGTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp GCTTTAAGTTCAAACAATATTTTGGTGGAAATCTTAGTTCATGTGTCCCCAGGAGTCAGCTCGGCCGCCTaGCCCCTCGCTGCCACTGCC +
Preference number: 3 (lower is better)
Translates to: ALSSNNILVEILVHVSPGVSSAA*PLAATA
Trigger: GGCAGTGGCAGCGAGGGGCAAGGCGGCCGAGCTGAC...TCCTGGGGACACATGAACTAAGATTTCCACCAAAATATTGTTTGAACTTAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp GCACCATGTTTGAGGCAACTCTCCTTGAGCTTCTCCACCGATGTGCCCTCGGTCTGGGCTCTAAGTGGATaGAACTGGTTTACTCATATC +
Preference number: 3 (lower is better)
Translates to: APCLRQLSLSFSTDVPSVWALSG*NWFTHI
Trigger: GATATGAGTAAACCAGTTCAATCCACTTAGAGCCCA...GACCGAGGGCACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp GGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCCGGTTGTGTTTGAAGTaGCTGAAGTCTCATCTCATG +
Preference number: 3 (lower is better)
Translates to: GLPLLACSACSLIEPKTTRLCLK*LKSHLM
Trigger: CATGAGATGAGACTTCAGCAACTTCAAACACAACCG...GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 72 bp GCAGAGGTATCCCAGGACAGAGTGGAAGGCAACAGCTaGGCCCTTGTTGCACAAAATGATGATGTGACCATG +
Preference number: 3 (lower is better)
Translates to: AEVSQDRVEGNS*ALVAQNDDVTM
Trigger: CATGGTCACATCATCATTTTGTGCAACAAGGGCTCAGCTGTTGCCTTCCACTCTGTCCTGGGATACCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 72 bp TTCTTTACTGGCTTGCCTCTCCTGGCTTGCTCAGCCTaGTCTCTTATAGAACCCAAGACTACCAGCACAGAG +
Preference number: 3 (lower is better)
Translates to: FFTGLPLLACSA*SLIEPKTTSTE
Trigger: CTCTGTGCTGGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCCAGTAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp GGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCCTTGAGCAGTCTACATaGACAGCAGCATGTATGTAT +
Preference number: 3 (lower is better)
Translates to: GLPLLACSACSLIEPKTTLEQST*TAACMY
Trigger: ATACATACATGCTGCTGTCAATGTAGACTGCTCAAG...GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGATACTCTGTCTCTTCCTaGAGAGGCCCTCTACCTACT +
Preference number: 3 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRYSVSS*RGPLPT
Trigger: AGTAGGTAGAGGGCCTCTCAAGGAAGAGACAGAGTA...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp GCACCATGTTTGAGGCAACTCTCCTTGAGCTTCTCCACCGATGTGCCCTCGGTCTTCATTTTCACACGGTaGTGTTTGAAGTTGCTGAAG +
Preference number: 3 (lower is better)
Translates to: APCLRQLSLSFSTDVPSVFIFTR*CLKLLK
Trigger: CTTCAGCAACTTCAAACACAACCGTGTGAAAATGAA...GACCGAGGGCACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp GGCAAGAGCCATAGTGAAAGCAACTGCAAAGGTGGTCTGCTGAAGGATGCAGGCCTCCAGTCTAAACTGTaGACTCTCACCTCAATATCC +
Preference number: 3 (lower is better)
Translates to: GKSHSESNCKGGLLKDAGLQSKL*TLTSIS
Trigger: GGATATTGAGGTGAGAGTCAACAGTTTAGACTGGAG...GCCTGCATCCTTCAGCAGACCACCTTTGCAGTTGCTTTCACTATGGCTCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp GCACCATGTTTGAGGCAACTCTCCTTGAGCTTCTCCACCGATGTGCCCTCGGTCTGTATGGTGGAGATATaGCCATCCATATTCCACAAA +
Preference number: 3 (lower is better)
Translates to: APCLRQLSLSFSTDVPSVCMVEI*PSIFHK
Trigger: TTTGTGGAATATGGATGGCAATATCTCCACCATACA...GACCGAGGGCACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp GCACCATGTTTGAGGCAACTCTCCTTGAGCTTCTCCACCGATGTGCCCTCGGTCTTCAATATGAGCATCTaGGTCAATGTATGGTGGAGA +
Preference number: 3 (lower is better)
Translates to: APCLRQLSLSFSTDVPSVFNMSI*VNVWWR
Trigger: TCTCCACCATACATTGACCAAGATGCTCATATTGAA...GACCGAGGGCACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 72 bp CTCAGCTCCCTTTCCGAAGCAGCATGTACTAGCTTATaGTGGGTCACATTCTTGGGGTCTTCTAAGCTCCCA +
Preference number: 3 (lower is better)
Translates to: LSSLSEAACTSL*WVTFLGSSKLP
Trigger: TGGGAGCTTAGAAGACCCCAAGAATGTGACCCATCATAAGCTAGTACATGCTGCTTCGGAAAGGGAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 72 bp GGATGCCTCTTATGTCCCAGTACTCTGTCTCTTCCTTaGGAGGCCCTCTACCTACTCATCCCCATCATTTGT +
Preference number: 3 (lower is better)
Translates to: GCLLCPSTLSLP*EALYLLIPIIC
Trigger: ACAAATGATGGGGATGAGTAGGTAGAGGGCCTCTCAAGGAAGAGACAGAGTACTGGGACATAAGAGGCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp GCACCATGTTTGAGGCAACTCTCCTTGAGCTTCTCCACCGATGTGCCCTCGGTCTGCTTTATTGGATCTTaGTCAAACAGTTGTACTAGC +
Preference number: 3 (lower is better)
Translates to: APCLRQLSLSFSTDVPSVCFIGS*SNSCTS
Trigger: GCTAGTACAACTGTTTGACAAAGATCCAATAAAGCA...GACCGAGGGCACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp GGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCGAAGAGCCTTTTAATTaGATCTTGGTTCCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: GLPLLACSACSLIEPKTTEEPFN*ILVPPS
Trigger: AGAAGGAGGAACCAAGATCAAATTAAAAGGCTCTTC...GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp GATATCCCCATAGATACTTGGATGCCTCTTATGTCCCAGTACTCTGTCTCTTCCTCAGCAGAAGGGCCTTaGAGGTTCTGCTCTCAGGAA +
Preference number: 3 (lower is better)
Translates to: DIPIDTWMPLMSQYSVSSSAEGP*RFCSQE
Trigger: TTCCTGAGAGCAGAACCTCAAAGGCCCTTCTGCTGA...GGAAGAGACAGAGTACTGGGACATAAGAGGCATCCAAGTATCTATGGGGATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp TGTTGTTGTCCCTATCACACTACTGTGTTTACTGTCTGGATACAGGAAGTAGAACCTGGGAAGGCTCCATaGCCCAGTGTAGGGGAATGC +
Preference number: 3 (lower is better)
Translates to: CCCPYHTTVFTVWIQEVEPGKAP*PSVGEC
Trigger: GCATTCCCCTACACTGGGCAATGGAGCCTTCCCAGG...TTCTACTTCCTGTATCCAGACAGTAAACACAGTAGTGTGATAGGGACAACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp GGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCCAGGAGAAATCTGGATaGAACTCCATATGTCTGTTT +
Preference number: 3 (lower is better)
Translates to: GLPLLACSACSLIEPKTTQEKSG*NSICLF
Trigger: AAACAGACATATGGAGTTCAATCCAGATTTCTCCTG...GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp GAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCTCTCAAAGAAGCATTTGTTaGACAGCTGTCCAAAACTTG +
Preference number: 3 (lower is better)
Translates to: EQELMQRPWRDVLYWLASQRSIC*TAVQNL
Trigger: CAAGTTTTGGACAGCTGTCAAACAAATGCTTCTTTG...AGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp CTCAGGAAAGCCCATCTCTGTGAGCTGCCACAAGGCATTCTCATCCATTCGCTCTTCACACGGTTGTGTTaGAAGTTGCTGAAGTCTCAT +
Preference number: 3 (lower is better)
Translates to: LRKAHLCELPQGILIHSLFTRLC*KLLKSH
Trigger: ATGAGACTTCAGCAACTTCAAACACAACCGTGTGAA...GAGCGAATGGATGAGAATGCCTTGTGGCAGCTCACAGAGATGGGCTTTCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp GGCAAGAGCCATAGTGAAAGCAACTGCAAAGGTGGTCTGCTGAAGGATGCAGGCTGCTCTTCTCTGTATTaGCATAATGACTCTCTGGAC +
Preference number: 3 (lower is better)
Translates to: GKSHSESNCKGGLLKDAGCSSLY*HNDSLD
Trigger: GTCCAGAGAGTCATTATGCAAATACAGAGAAGAGCA...GCCTGCATCCTTCAGCAGACCACCTTTGCAGTTGCTTTCACTATGGCTCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CCA 72 bp AAAATGGTCACACAGAGAGCTCAACAGAATTCTCCATaGCCTGAGGCACTGACATGTGATTCAGCAGAAGGG +
Preference number: 3 (lower is better)
Translates to: KMVTQRAQQNSP*PEALTCDSAEG
Trigger: CCCTTCTGCTGAATCACATGTCAGTGCCTCAGGCCATGGAGAATTCTGTTGAGCTCTCTGTGTGACCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp ACTAGGGTACACATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGTCCTCTCCGTCTTGTaGACTGCTTCAAAGTTTACT +
Preference number: 3 (lower is better)
Translates to: TRVHMEGPMAPAVFIAQDVLSVL*TASKFT
Trigger: AGTAAACTTTGAAGCAGTCAACAAGACGGAGAGGAC...ATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCATGTGTACCCTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp CTGCTATTCATCACCAAGAAAGTCAGGACTGGAACTCAAGCAGGGCAAGGAGCACTCCAGTCTAAACTGTaGACTCTCACCTCAATATCC +
Preference number: 3 (lower is better)
Translates to: LLFITKKVRTGTQAGQGALQSKL*TLTSIS
Trigger: GGATATTGAGGTGAGAGTCAACAGTTTAGACTGGAG...TGCTCCTTGCCCTGCTTGAGTTCCAGTCCTGACTTTCTTGGTGATGAATAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp CTCAGGAAAGCCCATCTCTGTGAGCTGCCACAAGGCATTCTCATCCATTCGCTCTCATTAGAAATCTCATaGTCTGCACAGGGAGTACAA +
Preference number: 3 (lower is better)
Translates to: LRKAHLCELPQGILIHSLSLEIS*SAQGVQ
Trigger: TTGTACTCCCTGTGCAGACAATGAGATTTCTAATGA...GAGCGAATGGATGAGAATGCCTTGTGGCAGCTCACAGAGATGGGCTTTCCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp ACTAGGGTACACATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGAATGGAGCCATCATaGCTTAGACACAGAAAAGTA +
Preference number: 3 (lower is better)
Translates to: TRVHMEGPMAPAVFIAQDGMEPS*LRHRKV
Trigger: TACTTTTCTGTGTCTAAGCAATGATGGCTCCATTCC...ATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCATGTGTACCCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp ACTAGGGTACACATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATAGTGTACTTTGGAAATaGCTGGGGAATCTTAGGACA +
Preference number: 3 (lower is better)
Translates to: TRVHMEGPMAPAVFIAQDSVLWK*LGNLRT
Trigger: TGTCCTAAGATTCCCCAGCAATTTCCAAAGTACACT...ATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCATGTGTACCCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp AGCAAATTGTGGCAGAATCATCCACAAGGTGAGCAGTCAATACGTATAAATGAAGGCAGCGGAAGCACCTaGCTTCTCCTCTTCCTACAG +
Preference number: 3 (lower is better)
Translates to: SKLWQNHPQGEQSIRINEGSGST*LLLFLQ
Trigger: CTGTAGGAAGAGGAGAAGCAAGGTGCTTCCGCTGCC...TTCATTTATACGTATTGACTGCTCACCTTGTGGATGATTCTGCCACAATTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGATTCACACGGTTGTGTTaGAAGTTGCTGAAGTCTCAT +
Preference number: 3 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRFTRLC*KLLKSH
Trigger: ATGAGACTTCAGCAACTTCAAACACAACCGTGTGAA...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 72 bp CATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTaGTGTCACTCAGCTCCCTTTCCGAAGCAGCATGTA +
Preference number: 3 (lower is better)
Translates to: HPGPGCFLPRLF*CHSAPFPKQHV
Trigger: TACATGCTGCTTCGGAAAGGGAGCTGAGTGACAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CCA 72 bp AGGGATTGGTATGTGCCCATAGGGTGGGTCTCAAGTTaGGCTTGTTATTGTTTGACCATTCCCCTAGGATAT +
Preference number: 3 (lower is better)
Translates to: RDWYVPIGWVSS*ACYCLTIPLGY
Trigger: ATATCCTAGGGGAATGGTCAAACAATAACAAGCCCAACTTGAGACCCACCCTATGGGCACATACCAATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 72 bp GGGAGGAAAGGGTTTATTCGGCTTACACTTCCATACTaGTATTCATCACCAAGAAAGTCAGGACTGGAACTC +
Preference number: 3 (lower is better)
Translates to: GRKGFIRLTLPY*YSSPRKSGLEL
Trigger: GAGTTCCAGTCCTGACTTTCTTGGTGATGAATAGCAGTATGGAAGTGTAAGCCGAATAAACCCTTTCCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CCA 72 bp TCAAAGAAACAATGGCAAGTGAAAGAGATGTGTCCTTaGGAGCCATCTGGTAGAGAGAAGGATACTGACCAC +
Preference number: 3 (lower is better)
Translates to: SKKQWQVKEMCP*EPSGREKDTDH
Trigger: GTGGTCAGTATCCTTCTCTCTACCAGATGGCTCCCAAGGACACATCTCTTTCACTTGCCATTGTTTCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp AGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGTCACTCAGCTGTCCTCTCCGTCTTGTaGACTGCTTCAAAGTTTACT +
Preference number: 3 (lower is better)
Translates to: RHPGPGCFLPRLFCCHSAVLSVL*TASKFT
Trigger: AGTAAACTTTGAAGCAGTCAACAAGACGGAGAGGAC...AGCTGAGTGACAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp TGCATTAGTAAAGGTGACAATTTCCTAAAGAGAACACCGATGGCTCAGACTCTATACTCTGTCTCTTCCTaGAGAGGCCCTCTACCTACT +
Preference number: 3 (lower is better)
Translates to: CISKGDNFLKRTPMAQTLYSVSS*RGPLPT
Trigger: AGTAGGTAGAGGGCCTCTCAAGGAAGAGACAGAGTA...TAGAGTCTGAGCCATCGGTGTTCTCTTTAGGAAATTGTCACCTTTACTAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp AGGGATTGGTATGTGCCCATAGGGTGGGTCTCAAGTTGGGCTTGTTATTGTTTGCAAAGAAGCATTTGTTaGACAGCTGTCCAAAACTTG +
Preference number: 3 (lower is better)
Translates to: RDWYVPIGWVSSWACYCLQRSIC*TAVQNL
Trigger: CAAGTTTTGGACAGCTGTCAAACAAATGCTTCTTTG...CAAACAATAACAAGCCCAACTTGAGACCCACCCTATGGGCACATACCAATCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp CATTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATGACCAAGAAGCAGTCCACAAAGAAGAAGTaGGATCAGGGTGCAGATAGG +
Preference number: 3 (lower is better)
Translates to: HCLSQGFYSCTNIMTKKQSTKKK*DQGADR
Trigger: CCTATCTGCACCCTGATCCAACTTCTTCTTTGTGGA...CTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 72 bp CCACCTAAAATGAACCATCAAAGAAACAATGGCAAGTaGAAGAGATGTGTCCTTGGGAGCCATCTGGTAGAG +
Preference number: 3 (lower is better)
Translates to: PPKMNHQRNNGK*KRCVLGSHLVE
Trigger: CTCTACCAGATGGCTCCCAAGGACACATCTCTTTCACTTGCCATTGTTTCTTTGATGGTTCATTTTAGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CCA 72 bp TGTTGTTGTCCCTATCACACTACTGTGTTTACTGTCTaGATACAGGAAGTAGAACCTTTAGGGTCCATAGCC +
Preference number: 3 (lower is better)
Translates to: CCCPYHTTVFTV*IQEVEPLGSIA
Trigger: GGCTATGGACCCTAAAGGTTCTACTTCCTGTATCCAGACAGTAAACACAGTAGTGTGATAGGGACAACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp GATATCCCCATAGATACTTGGATGCCTCTTATGTCCCAGTACTCTGTCTCTTCCCAGGAGAAATCTGGATaGAACTCCATATGTCTGTTT +
Preference number: 3 (lower is better)
Translates to: DIPIDTWMPLMSQYSVSSQEKSG*NSICLF
Trigger: AAACAGACATATGGAGTTCAATCCAGATTTCTCCTG...GGAAGAGACAGAGTACTGGGACATAAGAGGCATCCAAGTATCTATGGGGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp GATATCCCCATAGATACTTGGATGCCTCTTATGTCCCAGTACTCTGTCTCTTCCCATAGGAAACAGAATTaGAGTGTGATGAGCAAAGTG +
Preference number: 3 (lower is better)
Translates to: DIPIDTWMPLMSQYSVSSHRKQN*SVMSKV
Trigger: CACTTTGCTCATCACACTCAAATTCTGTTTCCTATG...GGAAGAGACAGAGTACTGGGACATAAGAGGCATCCAAGTATCTATGGGGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 72 bp GTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATaGCCAAGAAGCAGTTTGGGGAGGAAAGGGTTTATT +
Preference number: 3 (lower is better)
Translates to: VLVRVSIPAQTS*PRSSLGRKGFI
Trigger: AATAAACCCTTTCCTCCCCAAACTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 72 bp GAAATTTCCCATTGTCTTAGTCAGGGTTTCTATTCCTaGACAAACATCATGACCAAGAAGCAGTTTGGGGAG +
Preference number: 3 (lower is better)
Translates to: EISHCLSQGFYS*TNIMTKKQFGE
Trigger: CTCCCCAAACTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAATGGGAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 72 bp CTGGTCTACATCTGTCTCATTAGAAATCTCATTGTCTaGACAGGGAGTACAATTGTAGCAGCAGATAGCCTT +
Preference number: 3 (lower is better)
Translates to: LVYICLIRNLIV*TGSTIVAADSL
Trigger: AAGGCTATCTGCTGCTACAATTGTACTCCCTGTGCAGACAATGAGATTTCTAATGAGACAGATGTAGACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 72 bp CACAGACTTTTGATAGCAGTTGCTCTTCTCTGTATTTaGATAATGACTCTCTGGACACTTCACACACTGGTC +
Preference number: 3 (lower is better)
Translates to: HRLLIAVALLCI*IMTLWTLHTLV
Trigger: GACCAGTGTGTGAAGTGTCCAGAGAGTCATTATGCAAATACAGAGAAGAGCAACTGCTATCAAAAGTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CCA 72 bp ATTAATTGTGTGAGGGATTGGTATGTGCCCATAGGGTaGGTCTCAAGTTGGGCTTGTTATTGTTTGACCATT +
Preference number: 3 (lower is better)
Translates to: INCVRDWYVPIG*VSSWACYCLTI
Trigger: AATGGTCAAACAATAACAAGCCCAACTTGAGACCCACCCTATGGGCACATACCAATCCCTCACACAATTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CCA 72 bp CACCTCAATATCCTTCAGGAAAGTATTAAGCTGCCATaGAAAGAACTCCATCCCTTCTTCATTTTCACACGG +
Preference number: 3 (lower is better)
Translates to: HLNILQESIKLP*KELHPFFIFTR
Trigger: CCGTGTGAAAATGAAGAAGGGATGGAGTTCTTTCCATGGCAGCTTAATACTTTCCTGAAGGATATTGAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CCA 72 bp GCAGTTGCTCTTCTCTGTATTTGCATAATGACTCTCTaGACACTTCACACACTGGTCTACATCTGTCTCATT +
Preference number: 3 (lower is better)
Translates to: AVALLCICIMTL*TLHTLVYICLI
Trigger: AATGAGACAGATGTAGACCAGTGTGTGAAGTGTCCAGAGAGTCATTATGCAAATACAGAGAAGAGCAACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTAGTGTACTTTGGAAATaGCTGGGGAATCTTAGGACA +
Preference number: 3 (lower is better)
Translates to: WPLLEELHFCLNPFALVSSVLWK*LGNLRT
Trigger: TGTCCTAAGATTCCCCAGCAATTTCCAAAGTACACT...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTCTTGAGCAGTCTACATaGACAGCAGCATGTATGTAT +
Preference number: 3 (lower is better)
Translates to: WPLLEELHFCLNPFALVSLEQST*TAACMY
Trigger: ATACATACATGCTGCTGTCAATGTAGACTGCTCAAG...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp AGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGTCACTCAGCTTGTTTTCTTCCAAGATaGTTTTGCTGTCACTCAGCT +
Preference number: 3 (lower is better)
Translates to: RHPGPGCFLPRLFCCHSACFLPR*FCCHSA
Trigger: AGCTGAGTGACAGCAAAACAATCTTGGAAGAAAACA...AGCTGAGTGACAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp TTCATTATTGTTATTATTTCCCCCTCAATAATCCTTCCCCCTATACTCCCTACCAGCTCCATCTATGGTTaGGCTGTGGATGTCTACATC +
Preference number: 3 (lower is better)
Translates to: FIIVIISPSIILPPILPTSSIYG*AVDVYI
Trigger: GATGTAGACATCCACAGCCAAACCATAGATGGAGCT...GGTAGGGAGTATAGGGGGAAGGATTATTGAGGGGGAAATAATAACAATAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp AGCAAATTGTGGCAGAATCATCCACAAGGTGAGCAGTCAATACGTATAAATGAAAGCTCCATCTATGGTTaGGCTGTGGATGTCTACATC +
Preference number: 3 (lower is better)
Translates to: SKLWQNHPQGEQSIRINESSIYG*AVDVYI
Trigger: GATGTAGACATCCACAGCCAAACCATAGATGGAGCT...TTCATTTATACGTATTGACTGCTCACCTTGTGGATGATTCTGCCACAATTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp ACTCAAATTTACTGTAGTAAAGTCTGGATGTGTTGTAGAGAAAAGCAATCCGAAAGCCCAATCCTTCCTTaGCTCTTGCTCTGCCTTGAC +
Preference number: 3 (lower is better)
Translates to: TQIYCSKVWMCCREKQSESPILP*LLLCLD
Trigger: GTCAAGGCAGAGCAAGAGCAAAGGAAGGATTGGGCT...TTCGGATTGCTTTTCTCTACAACACATCCAGACTTTACTACAGTAAATTTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp TGTTGTTGTCCCTATCACACTACTGTGTTTACTGTCTGGATACAGGAAGTAGAACGGTTGTGTTTGAAGTaGCTGAAGTCTCATCTCATG +
Preference number: 3 (lower is better)
Translates to: CCCPYHTTVFTVWIQEVERLCLK*LKSHLM
Trigger: CATGAGATGAGACTTCAGCAACTTCAAACACAACCG...TTCTACTTCCTGTATCCAGACAGTAAACACAGTAGTGTGATAGGGACAACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp ATCAATAACAAGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGTCCACAAAGAAGAAGTaGGATCAGGGTGCAGATAGG +
Preference number: 3 (lower is better)
Translates to: INNKTSWSWMFSSKIVLLSTKKK*DQGADR
Trigger: CCTATCTGCACCCTGATCCAACTTCTTCTTTGTGGA...CAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCTTGTTATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTTCATTAGAAATCTCATaGTCTGCACAGGGAGTACAA +
Preference number: 3 (lower is better)
Translates to: WPLLEELHFCLNPFALVSSLEIS*SAQGVQ
Trigger: TTGTACTCCCTGTGCAGACAATGAGATTTCTAATGA...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTTGTATGGTGGAGATATaGCCATCCATATTCCACAAA +
Preference number: 3 (lower is better)
Translates to: WPLLEELHFCLNPFALVSCMVEI*PSIFHK
Trigger: TTTGTGGAATATGGATGGCAATATCTCCACCATACA...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp AGCAAATTGTGGCAGAATCATCCACAAGGTGAGCAGTCAATACGTATAAATGAAGGAATGGAGCCATCATaGCTTAGACACAGAAAAGTA +
Preference number: 3 (lower is better)
Translates to: SKLWQNHPQGEQSIRINEGMEPS*LRHRKV
Trigger: TACTTTTCTGTGTCTAAGCAATGATGGCTCCATTCC...TTCATTTATACGTATTGACTGCTCACCTTGTGGATGATTCTGCCACAATTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp CAGAAAGCTCACAGACTTTTGATAGCAGTTGCTCTTCTCTGTATTTGCATAATGTGGGCTCTAAGTGGATaGAACTGGTTTACTCATATC +
Preference number: 3 (lower is better)
Translates to: QKAHRLLIAVALLCICIMWALSG*NWFTHI
Trigger: GATATGAGTAAACCAGTTCAATCCACTTAGAGCCCA...CATTATGCAAATACAGAGAAGAGCAACTGCTATCAAAAGTCTGTGAGCTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp CCCATATGTGGCTTAATGAACAACAATCTTTACCACTGCCTATTTTCATTCACTGTCCTCTCCGTCTTGTaGACTGCTTCAAAGTTTACT +
Preference number: 3 (lower is better)
Translates to: PICGLMNNNLYHCLFSFTVLSVL*TASKFT
Trigger: AGTAAACTTTGAAGCAGTCAACAAGACGGAGAGGAC...AGTGAATGAAAATAGGCAGTGGTAAAGATTGTTGTTCATTAAGCCACATATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp TGCATTAGTAAAGGTGACAATTTCCTAAAGAGAACACCGATGGCTCAGACTCTACCTTTTAATTTGATCTaGGTTCCTCCTTCTCTAGTC +
Preference number: 3 (lower is better)
Translates to: CISKGDNFLKRTPMAQTLPFNLI*VPPSLV
Trigger: GACTAGAGAAGGAGGAACCAAGATCAAATTAAAAGG...TAGAGTCTGAGCCATCGGTGTTCTCTTTAGGAAATTGTCACCTTTACTAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp TGTTGTTGTCCCTATCACACTACTGTGTTTACTGTCTGGATACAGGAAGTAGAAGAAGAGCCTTTTAATTaGATCTTGGTTCCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: CCCPYHTTVFTVWIQEVEEEPFN*ILVPPS
Trigger: AGAAGGAGGAACCAAGATCAAATTAAAAGGCTCTTC...TTCTACTTCCTGTATCCAGACAGTAAACACAGTAGTGTGATAGGGACAACAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp TTCATTATTGTTATTATTTCCCCCTCAATAATCCTTCCCCCTATACTCCCTACCTGGGCTTGTTATTGTTaGACCATTCCCCTAGGATAT +
Preference number: 3 (lower is better)
Translates to: FIIVIISPSIILPPILPTWACYC*TIPLGY
Trigger: ATATCCTAGGGGAATGGTCAAACAATAACAAGCCCA...GGTAGGGAGTATAGGGGGAAGGATTATTGAGGGGGAAATAATAACAATAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp CCATATTCCACAAAGAAGAAGTTGGATCAGGGTGCAGATAGGAATGATATAGTTTGCTCTTCTCTGTATTaGCATAATGACTCTCTGGAC +
Preference number: 3 (lower is better)
Translates to: PYSTKKKLDQGADRNDIVCSSLY*HNDSLD
Trigger: GTCCAGAGAGTCATTATGCAAATACAGAGAAGAGCA...AACTATATCATTCCTATCTGCACCCTGATCCAACTTCTTCTTTGTGGAATATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 72 bp GCTCCTTTCTCTGTGATAACTCCAGCTGTGTCAAATTaGCACAAAACTAGCCACTACATCCATCAAACTAAT +
Preference number: 3 (lower is better)
Translates to: APFSVITPAVSN*HKTSHYIHQTN
Trigger: ATTAGTTTGATGGATGTAGTGGCTAGTTTTGTGTCAATTTGACACAGCTGGAGTTATCACAGAGAAAGGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 72 bp AAATTTGGATTCGTTGAATGTATCAGGCAAATTTCTTaGCAAGAAGGCCATGGTATAACTCCCAAGGGCCAA +
Preference number: 3 (lower is better)
Translates to: KFGFVECIRQIS*QEGHGITPKGQ
Trigger: TTGGCCCTTGGGAGTTATACCATGGCCTTCTTGTCAAGAAATTTGCCTGATACATTCAACGAATCCAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 72 bp GGTTCCTCCTTCTCTAGTCCTCTCCGTCTTGTTGACTaGTTCAAAGTTTACTTTGTTATGATTATGTTGTTC +
Preference number: 3 (lower is better)
Translates to: GSSFSSPLRLVD*FKVYFVMIMLF
Trigger: GAACAACATAATCATAACAAAGTAAACTTTGAAGCAGTCAACAAGACGGAGAGGACTAGAGAAGGAGGAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 72 bp ATGTTCATGACCCAGACATGCCATGTCAATAACCTTTaGCCAATATTTCGCATTAGACCTTCTAGAGAATCA +
Preference number: 3 (lower is better)
Translates to: MFMTQTCHVNNL*PIFRIRPSRES
Trigger: TGATTCTCTAGAAGGTCTAATGCGAAATATTGGGCAAAGGTTATTGACATGGCATGTCTGGGTCATGAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 72 bp ACTCTCACCTCAATATCCTTCAGGAAAGTATTAAGCTaGCATGGAAAGAACTCCATCCCTTCTTCATTTTCA +
Preference number: 3 (lower is better)
Translates to: TLTSISFRKVLS*HGKNSIPSSFS
Trigger: TGAAAATGAAGAAGGGATGGAGTTCTTTCCATGGCAGCTTAATACTTTCCTGAAGGATATTGAGGTGAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp TGTTGTTGTCCCTATCACACTACTGTGTTTACTGTCTGGATACAGGAAGTAGAATGCTTTATTGGATCTTaGTCAAACAGTTGTACTAGC +
Preference number: 3 (lower is better)
Translates to: CCCPYHTTVFTVWIQEVECFIGS*SNSCTS
Trigger: GCTAGTACAACTGTTTGACAAAGATCCAATAAAGCA...TTCTACTTCCTGTATCCAGACAGTAAACACAGTAGTGTGATAGGGACAACAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp ATATGCTCCATTAACAGTCACCTCATTTCTTGTAGACATGAGCAATTTGGGGTTTGTTTTCTTCCAAGATaGTTTTGCTGTCACTCAGCT +
Preference number: 3 (lower is better)
Translates to: ICSINSHLISCRHEQFGVCFLPR*FCCHSA
Trigger: AGCTGAGTGACAGCAAAACAATCTTGGAAGAAAACA...AACCCCAAATTGCTCATGTCTACAAGAAATGAGGTGACTGTTAATGGAGCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp TGTTGTTGTCCCTATCACACTACTGTGTTTACTGTCTGGATACAGGAAGTAGAAAGATTCCCATTCATTTaGTCAACTGCTTTTGGAAAC +
Preference number: 3 (lower is better)
Translates to: CCCPYHTTVFTVWIQEVERFPFI*STAFGN
Trigger: GTTTCCAAAAGCAGTTGACAAAATGAATGGGAATCT...TTCTACTTCCTGTATCCAGACAGTAAACACAGTAGTGTGATAGGGACAACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp AGCAAATTGTGGCAGAATCATCCACAAGGTGAGCAGTCAATACGTATAAATGAACATAGGAAACAGAATTaGAGTGTGATGAGCAAAGTG +
Preference number: 3 (lower is better)
Translates to: SKLWQNHPQGEQSIRINEHRKQN*SVMSKV
Trigger: CACTTTGCTCATCACACTCAAATTCTGTTTCCTATG...TTCATTTATACGTATTGACTGCTCACCTTGTGGATGATTCTGCCACAATTTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 72 bp GTTATGTATTCCCTCACTTTCTATGATGTGACAAATTaGCAACACTCTTTAGCCCAATCCTTCCTTTGCTCT +
Preference number: 3 (lower is better)
Translates to: VMYSLTFYDVTN*QHSLAQSFLCS
Trigger: AGAGCAAAGGAAGGATTGGGCTAAAGAGTGTTGTCAATTTGTCACATCATAGAAAGTGAGGGAATACATAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 72 bp TCAATAATATGGGGTTCAATGTTCATGACCCAGACATaGCATGTCAATAACCTTTGCCCAATATTTCGCATT +
Preference number: 3 (lower is better)
Translates to: SIIWGSMFMTQT*HVNNLCPIFRI
Trigger: AATGCGAAATATTGGGCAAAGGTTATTGACATGGCATGTCTGGGTCATGAACATTGAACCCCATATTATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 72 bp AATATGAGCATCTTGGTCAATGTATGGTGGAGATATTaGCATCCATATTCCACAAAGAAGAAGTTGGATCAG +
Preference number: 3 (lower is better)
Translates to: NMSILVNVWWRY*HPYSTKKKLDQ
Trigger: CTGATCCAACTTCTTCTTTGTGGAATATGGATGGCAATATCTCCACCATACATTGACCAAGATGCTCATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp ACTCAAATTTACTGTAGTAAAGTCTGGATGTGTTGTAGAGAAAAGCAATCCGAAGGAATGGAGCCATCATaGCTTAGACACAGAAAAGTA +
Preference number: 3 (lower is better)
Translates to: TQIYCSKVWMCCREKQSEGMEPS*LRHRKV
Trigger: TACTTTTCTGTGTCTAAGCAATGATGGCTCCATTCC...TTCGGATTGCTTTTCTCTACAACACATCCAGACTTTACTACAGTAAATTTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp CCATATTCCACAAAGAAGAAGTTGGATCAGGGTGCAGATAGGAATGATATAGTTTGCTTTATTGGATCTTaGTCAAACAGTTGTACTAGC +
Preference number: 3 (lower is better)
Translates to: PYSTKKKLDQGADRNDIVCFIGS*SNSCTS
Trigger: GCTAGTACAACTGTTTGACAAAGATCCAATAAAGCA...AACTATATCATTCCTATCTGCACCCTGATCCAACTTCTTCTTTGTGGAATATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp ACTCAAATTTACTGTAGTAAAGTCTGGATGTGTTGTAGAGAAAAGCAATCCGAAAGTGTACTTTGGAAATaGCTGGGGAATCTTAGGACA +
Preference number: 3 (lower is better)
Translates to: TQIYCSKVWMCCREKQSESVLWK*LGNLRT
Trigger: TGTCCTAAGATTCCCCAGCAATTTCCAAAGTACACT...TTCGGATTGCTTTTCTCTACAACACATCCAGACTTTACTACAGTAAATTTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp CCCATATGTGGCTTAATGAACAACAATCTTTACCACTGCCTATTTTCATTCACTTTCATTTTCACACGGTaGTGTTTGAAGTTGCTGAAG +
Preference number: 3 (lower is better)
Translates to: PICGLMNNNLYHCLFSFTFIFTR*CLKLLK
Trigger: CTTCAGCAACTTCAAACACAACCGTGTGAAAATGAA...AGTGAATGAAAATAGGCAGTGGTAAAGATTGTTGTTCATTAAGCCACATATGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 72 bp TGCTTATTGCCAAGTTATGTATTCCCTCACTTTCTATaGTGTGACAAATTGACAACACTCTTTAGCCCAATC +
Preference number: 3 (lower is better)
Translates to: CLLPSYVFPHFL*CDKLTTLFSPI
Trigger: GATTGGGCTAAAGAGTGTTGTCAATTTGTCACATCATAGAAAGTGAGGGAATACATAACTTGGCAATAAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 72 bp TGCAAGTTTTACAACAATAAAGGTCTCCCTTCAGCATaGAACATGTGGAGATCTAGAACAAAATTGAAAGAC +
Preference number: 3 (lower is better)
Translates to: CKFYNNKGLPSA*NMWRSRTKLKD
Trigger: GTCTTTCAATTTTGTTCTAGATCTCCACATGTTGCATGCTGAAGGGAGACCTTTATTGTTGTAAAACTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CCA 72 bp CAGAGATACAAACTCTTACCAAATGTTCTGGTTCCCTaGCTCTTAAATATTCCTACCAACTCTTTACCAATT +
Preference number: 3 (lower is better)
Translates to: QRYKLLPNVLVP*LLNIPTNSLPI
Trigger: AATTGGTAAAGAGTTGGTAGGAATATTTAAGAGCCAGGGAACCAGAACATTTGGTAAGAGTTTGTATCTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp ACTCAAATTTACTGTAGTAAAGTCTGGATGTGTTGTAGAGAAAAGCAATCCGAACCTTTTAATTTGATCTaGGTTCCTCCTTCTCTAGTC +
Preference number: 3 (lower is better)
Translates to: TQIYCSKVWMCCREKQSEPFNLI*VPPSLV
Trigger: GACTAGAGAAGGAGGAACCAAGATCAAATTAAAAGG...TTCGGATTGCTTTTCTCTACAACACATCCAGACTTTACTACAGTAAATTTGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp GGATCTTTGTCAAACAGTTGTACTAGCTTTTTAACTTTCCCTCTTCCCATTATAGAAGAGCCTTTTAATTaGATCTTGGTTCCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: GSLSNSCTSFLTFPLPIIEEPFN*ILVPPS
Trigger: AGAAGGAGGAACCAAGATCAAATTAAAAGGCTCTTC...TATAATGGGAAGAGGGAAAGTTAAAAAGCTAGTACAACTGTTTGACAAAGATCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp CCCATATGTGGCTTAATGAACAACAATCTTTACCACTGCCTATTTTCATTCACTACAATAGGAGTGTCTTaGTGTTTCACAAATATGCCA +
Preference number: 3 (lower is better)
Translates to: PICGLMNNNLYHCLFSFTTIGVS*CFTNMP
Trigger: TGGCATATTTGTGAAACACAAAGACACTCCTATTGT...AGTGAATGAAAATAGGCAGTGGTAAAGATTGTTGTTCATTAAGCCACATATGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR-3UTR CAA 90 bp GCTTTAAGTTCAAACAATATTTTGGTGGAAATCTTAGTTCATGTGTCCCCAGGAACAATAGGAGTGTCTTaGTGTTTCACAAATATGCCA +
Preference number: 3 (lower is better)
Translates to: ALSSNNILVEILVHVSPGTIGVS*CFTNMP
Trigger: TGGCATATTTGTGAAACACAAAGACACTCCTATTGT...TCCTGGGGACACATGAACTAAGATTTCCACCAAAATATTGTTTGAACTTAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 72 bp TATTTAGTTGTCTGTAGTTCTAAAAGCATTGTCTCTTaGGCAGTCTACATTGACAGCAGCATGTATGTATTG +
Preference number: 3 (lower is better)
Translates to: YLVVCSSKSIVS*AVYIDSSMYVL
Trigger: CAATACATACATGCTGCTGTCAATGTAGACTGCTCAAGAGACAATGCTTTTAGAACTACAGACAACTAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 72 bp CAATCCTTCCTTTGCTCTTGCTCTGCCTTGACAGACTaGAATCTATCTAAAACTGTTAAGCAAAATAATACT +
Preference number: 3 (lower is better)
Translates to: QSFLCSCSALTD*NLSKTVKQNNT
Trigger: AGTATTATTTTGCTTAACAGTTTTAGATAGATTTCAGTCTGTCAAGGCAGAGCAAGAGCAAAGGAAGGATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 72 bp CCTACAAAATTTCTTAAGTGCTCAATTTCTCAACAGTaGTCCATGAGTAACCAAGTCAAAATGAGAGTACAT +
Preference number: 3 (lower is better)
Translates to: PTKFLKCSISQQ*SMSNQVKMRVH
Trigger: ATGTACTCTCATTTTGACTTGGTTACTCATGGAGCACTGTTGAGAAATTGAGCACTTAAGAAATTTTGTAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR TCA 72 bp TTTGTAAGTCCAAAAGCAGATCTCCCAAATGTATCTTaGAACCAATTTCATCCTAGTGAGATCTATGACATA +
Preference number: 3 (lower is better)
Translates to: FVSPKADLPNVS*NQFHPSEIYDI
Trigger: TATGTCATAGATCTCACTAGGATGAAATTGGTTTCAAGATACATTTGGGAGATCTGCTTTTGGACTTACAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR GCA 72 bp GGAGAAATCTGGATTGAACTCCATATGTCTGTTTATTaGTGTGATGTTTGGATAACTTATCAATCACTACTT +
Preference number: 3 (lower is better)
Translates to: GEIWIELHMSVY*CDVWITYQSLL
Trigger: AAGTAGTGATTGATAAGTTATCCAAACATCACAGCAATAAACAGACATATGGAGTTCAATCCAGATTTCTCC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233421.2
3UTR CAA 72 bp AGCCACTCAGCCAGCACCATAGGCAGCGGAAGCACCTaGCTTCTCCTCTTCCTACAGGAACATCGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: SHSASTIGSGST*LLLFLQEHRAA
Trigger: CGCGGCGCGATGTTCCTGTAGGAAGAGGAGAAGCAAGGTGCTTCCGCTGCCTATGGTGCTGGCTGAGTGGCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 72 bp ATGGGAGGAGAGGCTTCTAGTCCTGGGAAGGCTCCATaGCCCAGTGTAGGGGAATGCCAGGATGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: MGGEASSPGKAP*PSVGECQDGEE
Trigger: CTCCTCCCCATCCTGGCATTCCCCTACACTGGGCAATGGAGCCTTCCCAGGACTAGAAGCCTCTCCTCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR TCA 90 bp TCCACCGATGTGCCCTCGGTCATCTCCTTCAGCCACTCAGCCAGCACCATAGGCACTTGGGACCAAATATaGAGGCGAGGAGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: STDVPSVISFSHSASTIGTWDQI*RRGVLC
Trigger: GCACAGCACTCCTCGCCTTCATATTTGGTCCCAAGT...GCCTATGGTGCTGGCTGAGTGGCTGAAGGAGATGACCGAGGGCACATCGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
3UTR CAA 72 bp AGTCTCTCATGGTGGCCTGGACAGCAGGCAGGCAGGTaGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: SLSWWPGQQAGR*AVARRTAFLSE
Trigger: TTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCAACCTGCCTGCCTGCTGTCCAGGCCACCATGAGAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR TCA 90 bp GCACCATGTTTGAGGCAACTCTCCTTGAGCTTCTCCACCGATGTGCCCTCGGTCAGAAACAATGGCAAGTaGAAGAGATGTGTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: APCLRQLSLSFSTDVPSVRNNGK*KRCVLG
Trigger: CCCAAGGACACATCTCTTTCACTTGCCATTGTTTCT...GACCGAGGGCACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR TCA 90 bp GCACCATGTTTGAGGCAACTCTCCTTGAGCTTCTCCACCGATGTGCCCTCGGTCTGTTGGGCTGACCAATaGAGTTCAAAGAACATAGGA +
Preference number: 4 (lower is better)
Translates to: APCLRQLSLSFSTDVPSVCWADQ*SSKNIG
Trigger: TCCTATGTTCTTTGAACTTCATTGGTCAGCCCAACA...GACCGAGGGCACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR GCA 90 bp AGGGATTGGTATGTGCCCATAGGGTGGGTCTCAAGTTGGGCTTGTTATTGTTTGTGGTCTGCTGAAGGATaGAGGCAACTGTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: RDWYVPIGWVSSWACYCLWSAEG*RQLCWA
Trigger: AGCCCAACACAGTTGCCTGCATCCTTCAGCAGACCA...CAAACAATAACAAGCCCAACTTGAGACCCACCCTATGGGCACATACCAATCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
3UTR CAA 72 bp TGGATGCCTCTTATGTCCCAGTACTCTGTCTCTTCCTaGAGAGGCCCTCTACCTACTCATCCCCATCATTTG +
Preference number: 4 (lower is better)
Translates to: WMPLMSQYSVSS*RGPLPTHPHHL
Trigger: CAAATGATGGGGATGAGTAGGTAGAGGGCCTCTCAAGGAAGAGACAGAGTACTGGGACATAAGAGGCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR TCA 90 bp GCACCATGTTTGAGGCAACTCTCCTTGAGCTTCTCCACCGATGTGCCCTCGGTCTATGGTATAGTTGAATaGGGCCTTTTCTTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: APCLRQLSLSFSTDVPSVYGIVE*GLFFSV
Trigger: CACTGAAAAGAAAAGGCCTCATTCAACTATACCATA...GACCGAGGGCACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR TCA 90 bp ACTAGGGTACACATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCAGAAGTTATCCATaGTGTTCCTGTGATTGCAGC +
Preference number: 4 (lower is better)
Translates to: TRVHMEGPMAPAVFIAQDGRSYP*CSCDCS
Trigger: GCTGCAATCACAGGAACATCATGGATAACTTCTGCC...ATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCATGTGTACCCTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042090.8
ENSMUST00000233836.2
CDS-3UTR TCA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGAGGCAGAAGTTATCCATaGTGTTCCTGTGATTGCAGC +
Preference number: 4 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRGRSYP*CSCDCS
Trigger: GCTGCAATCACAGGAACATCATGGATAACTTCTGCC...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042090.8
ENSMUST00000233836.2
CDS-3UTR CCA 90 bp CTCAGGAAAGCCCATCTCTGTGAGCTGCCACAAGGCATTCTCATCCATTCGCTCAGTATTAAGCTGCCATaGAAAGAACTCCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: LRKAHLCELPQGILIHSLSIKLP*KELHPF
Trigger: GAAGGGATGGAGTTCTTTCCATGGCAGCTTAATACT...GAGCGAATGGATGAGAATGCCTTGTGGCAGCTCACAGAGATGGGCTTTCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR TCA 90 bp GGCTTGCCTCTCCTGGCTTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCTTGGTATGGTATAGTTaGATGAGGCCTTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GLPLLACSACSLIEPKTTLVWYS*MRPFLF
Trigger: GAAAAGAAAAGGCCTCATTCAACTATACCATACCAA...GGTAGTCTTGGGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGAGAGGCAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR TCA 90 bp ACTAGGGTACACATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATACATCTCCTTCATGGTaGAACTCTTCAGTGATTTCG +
Preference number: 4 (lower is better)
Translates to: TRVHMEGPMAPAVFIAQDTSPSW*NSSVIS
Trigger: CGAAATCACTGAAGAGTTTCACCATGAAGGAGATGT...ATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCATGTGTACCCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR TCA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGAACATCTCCTTCATGGTaGAACTCTTCAGTGATTTCG +
Preference number: 4 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRTSPSW*NSSVIS
Trigger: CGAAATCACTGAAGAGTTTCACCATGAAGGAGATGT...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR GCA 90 bp CTCAGGAAAGCCCATCTCTGTGAGCTGCCACAAGGCATTCTCATCCATTCGCTCACCCTGGGGAGCATTTaGATAAAAGTTTCCTATTTT +
Preference number: 4 (lower is better)
Translates to: LRKAHLCELPQGILIHSLTLGSI*IKVSYF
Trigger: AAAATAGGAAACTTTTATGCAAATGCTCCCCAGGGT...GAGCGAATGGATGAGAATGCCTTGTGGCAGCTCACAGAGATGGGCTTTCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
3UTR CAA 72 bp ACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTaGCTGTCACTCAGCTCCCTTTCCGAAGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: TSWSWMFSSKIV*LSLSSLSEAAC
Trigger: ACATGCTGCTTCGGAAAGGGAGCTGAGTGACAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 72 bp CCCATAGGGTGGGTCTCAAGTTGGGCTTGTTATTGTTaGACCATTCCCCTAGGATATGCTCCATTAACAGTC +
Preference number: 4 (lower is better)
Translates to: PIGWVSSWACYC*TIPLGYAPLTV
Trigger: GACTGTTAATGGAGCATATCCTAGGGGAATGGTCAAACAATAACAAGCCCAACTTGAGACCCACCCTATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 72 bp CATCCCTTCTTCATTTTCACACGGTTGTGTTTGAAGTaGCTGAAGTCTCATCTCATGGAGGCTGTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: HPFFIFTRLCLK*LKSHLMEAVSH
Trigger: GTGGCTCACAGCCTCCATGAGATGAGACTTCAGCAACTTCAAACACAACCGTGTGAAAATGAAGAAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR TCA 90 bp CATTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATGACCAAGAAGCAGGGGGTTCAATGTTCATaGCCCAGACATGCCATGTCA +
Preference number: 4 (lower is better)
Translates to: HCLSQGFYSCTNIMTKKQGVQCS*PRHAMS
Trigger: TGACATGGCATGTCTGGGTCATGAACATTGAACCCC...CTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR TCA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGAGACTTTAAGTACCCATaGTCCAAATTTTCTCACCTG +
Preference number: 4 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRDFKYP*SKFSHL
Trigger: CAGGTGAGAAAATTTGGATCATGGGTACTTAAAGTC...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233836.2
3UTR CAA 72 bp GAACTCCATCCCTTCTTCATTTTCACACGGTTGTGTTaGAAGTTGCTGAAGTCTCATCTCATGGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ELHPFFIFTRLC*KLLKSHLMEAV
Trigger: CACAGCCTCCATGAGATGAGACTTCAGCAACTTCAAACACAACCGTGTGAAAATGAAGAAGGGATGGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR TCA 90 bp CTGCTATTCATCACCAAGAAAGTCAGGACTGGAACTCAAGCAGGGCAAGGAGCATTGGTATGGTATAGTTaGATGAGGCCTTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LLFITKKVRTGTQAGQGALVWYS*MRPFLF
Trigger: GAAAAGAAAAGGCCTCATTCAACTATACCATACCAA...TGCTCCTTGCCCTGCTTGAGTTCCAGTCCTGACTTTCTTGGTGATGAATAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR TCA 90 bp AGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGTCACTCAGCTCGACTGAGGGATCTCTaGAAATATTTCTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: RHPGPGCFLPRLFCCHSARLRDL*KYFWPL
Trigger: CAATGGCCAGAAATATTTTCAGAGATCCCTCAGTCG...AGCTGAGTGACAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR GCA 90 bp ACTAGGGTACACATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATAGAAATCTCATTGTCTaGACAGGGAGTACAATTGTA +
Preference number: 4 (lower is better)
Translates to: TRVHMEGPMAPAVFIAQDRNLIV*TGSTIV
Trigger: TACAATTGTACTCCCTGTGCAGACAATGAGATTTCT...ATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCATGTGTACCCTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR CCA 90 bp CTGCTATTCATCACCAAGAAAGTCAGGACTGGAACTCAAGCAGGGCAAGGAGCACAGAAGAGACAAATTTaGGAATTTGCAAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: LLFITKKVRTGTQAGQGAQKRQI*EFARAR
Trigger: TCTTGCTCTTGCAAATTCCCAAATTTGTCTCTTCTG...TGCTCCTTGCCCTGCTTGAGTTCCAGTCCTGACTTTCTTGGTGATGAATAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR TCA 90 bp ACTCAAATTTACTGTAGTAAAGTCTGGATGTGTTGTAGAGAAAAGCAATCCGAAGCAAAGGTGGTCTGCTaGAGGATGCAGGCAACTGTG +
Preference number: 4 (lower is better)
Translates to: TQIYCSKVWMCCREKQSEAKVVC*RMQATV
Trigger: CACAGTTGCCTGCATCCTTCAGCAGACCACCTTTGC...TTCGGATTGCTTTTCTCTACAACACATCCAGACTTTACTACAGTAAATTTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR CCA 90 bp AGGGATTGGTATGTGCCCATAGGGTGGGTCTCAAGTTGGGCTTGTTATTGTTTGTTGGTCAATGTATGGTaGAGATATTGCCATCCATAT +
Preference number: 4 (lower is better)
Translates to: RDWYVPIGWVSSWACYCLLVNVW*RYCHPY
Trigger: ATATGGATGGCAATATCTCCACCATACATTGACCAA...CAAACAATAACAAGCCCAACTTGAGACCCACCCTATGGGCACATACCAATCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
3UTR CAA 72 bp TTTCCTAAAAGCAGGATAGGTAGTGTACTTTGGAAATaGCTGGGGAATCTTAGGACAGTGCATGAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: FPKSRIGSVLWK*LGNLRTVHEEG
Trigger: ACCTTCCTCATGCACTGTCCTAAGATTCCCCAGCAATTTCCAAAGTACACTACCTATCCTGCTTTTAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR TCA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTACATCTCCTTCATGGTaGAACTCTTCAGTGATTTCG +
Preference number: 4 (lower is better)
Translates to: WPLLEELHFCLNPFALVSTSPSW*NSSVIS
Trigger: CGAAATCACTGAAGAGTTTCACCATGAAGGAGATGT...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR TCA 90 bp TGCATTAGTAAAGGTGACAATTTCCTAAAGAGAACACCGATGGCTCAGACTCTAACCTTTCTCTGCACATaGGCTGTGAGCCAAATAACA +
Preference number: 4 (lower is better)
Translates to: CISKGDNFLKRTPMAQTLTFLCT*AVSQIT
Trigger: TGTTATTTGGCTCACAGCTCATGTGCAGAGAAAGGT...TAGAGTCTGAGCCATCGGTGTTCTCTTTAGGAAATTGTCACCTTTACTAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042090.8
ENSMUST00000233836.2
CDS-3UTR TCA 90 bp GATATCCCCATAGATACTTGGATGCCTCTTATGTCCCAGTACTCTGTCTCTTCCCAAGACCACCTAAAATaGACCATCAAAGAAACAATG +
Preference number: 4 (lower is better)
Translates to: DIPIDTWMPLMSQYSVSSQDHLK*TIKETM
Trigger: CATTGTTTCTTTGATGGTTCATTTTAGGTGGTCTTG...GGAAGAGACAGAGTACTGGGACATAAGAGGCATCCAAGTATCTATGGGGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
3UTR CAA 72 bp ACAAACACTTGCAATGATCAAGGAATGGAGCCATCATaGCTTAGACACAGAAAAGTAGGATCACCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: TNTCNDQGMEPS*LRHRKVGSPEQ
Trigger: TTGCTCTGGTGATCCTACTTTTCTGTGTCTAAGCAATGATGGCTCCATTCCTTGATCATTGCAAGTGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 72 bp CAAAGGGTCTTCATAGCCCAGAAAGCTCACAGACTTTaGATAGCAGTTGCTCTTCTCTGTATTTGCATAATG +
Preference number: 4 (lower is better)
Translates to: QRVFIAQKAHRL*IAVALLCICIM
Trigger: CATTATGCAAATACAGAGAAGAGCAACTGCTATCAAAAGTCTGTGAGCTTTCTGGGCTATGAAGACCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR TCA 90 bp TGCATTAGTAAAGGTGACAATTTCCTAAAGAGAACACCGATGGCTCAGACTCTAGATTGGGATTCCCATTaGTCTCCTCAATGGCAAATA +
Preference number: 4 (lower is better)
Translates to: CISKGDNFLKRTPMAQTLDWDSH*SPQWQI
Trigger: TATTTGCCATTGAGGAGATCAATGGGAATCCCAATC...TAGAGTCTGAGCCATCGGTGTTCTCTTTAGGAAATTGTCACCTTTACTAATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042090.8
ENSMUST00000233836.2
CDS-3UTR TCA 90 bp AACAGTTGTACTAGCTTTTTAACTTTCCCTCTTCCCATTATATATGGGTGGGCCTGCTCTCTTCACTCATaGCCACATCAAATATCTGAC +
Preference number: 4 (lower is better)
Translates to: NSCTSFLTFPLPIIYGWACSLHS*PHQISD
Trigger: GTCAGATATTTGATGTGGTCATGAGTGAAGAGAGCA...GGCCCACCCATATATAATGGGAAGAGGGAAAGTTAAAAAGCTAGTACAACTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR TCA 90 bp CATTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATGACCAAGAAGCAGCCTGATGTGATGAAATaGATTCTTCTCTGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: HCLSQGFYSCTNIMTKKQPDVMK*ILLWSQ
Trigger: TTGAGACCAGAGAAGAATTCATTTCATCACATCAGG...CTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR TCA 90 bp ATATGCTCCATTAACAGTCACCTCATTTCTTGTAGACATGAGCAATTTGGGGTTGATTGGGATTCCCATTaGTCTCCTCAATGGCAAATA +
Preference number: 4 (lower is better)
Translates to: ICSINSHLISCRHEQFGVDWDSH*SPQWQI
Trigger: TATTTGCCATTGAGGAGATCAATGGGAATCCCAATC...AACCCCAAATTGCTCATGTCTACAAGAAATGAGGTGACTGTTAATGGAGCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042090.8
ENSMUST00000233836.2
CDS-3UTR TCA 90 bp TTCATTATTGTTATTATTTCCCCCTCAATAATCCTTCCCCCTATACTCCCTACCTCCAGTCTAAACTGTTaGCTCTCACCTCAATATCCT +
Preference number: 4 (lower is better)
Translates to: FIIVIISPSIILPPILPTSSLNC*LSPQYP
Trigger: AGGATATTGAGGTGAGAGTCAACAGTTTAGACTGGA...GGTAGGGAGTATAGGGGGAAGGATTATTGAGGGGGAAATAATAACAATAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR TCA 90 bp TGTTGTTGTCCCTATCACACTACTGTGTTTACTGTCTGGATACAGGAAGTAGAATTGGTATGGTATAGTTaGATGAGGCCTTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: CCCPYHTTVFTVWIQEVELVWYS*MRPFLF
Trigger: GAAAAGAAAAGGCCTCATTCAACTATACCATACCAA...TTCTACTTCCTGTATCCAGACAGTAAACACAGTAGTGTGATAGGGACAACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR GCA 90 bp TTCATTATTGTTATTATTTCCCCCTCAATAATCCTTCCCCCTATACTCCCTACCGTATGGTGGAGATATTaGCATCCATATTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: FIIVIISPSIILPPILPTVWWRY*HPYSTK
Trigger: CTTTGTGGAATATGGATGGCAATATCTCCACCATAC...GGTAGGGAGTATAGGGGGAAGGATTATTGAGGGGGAAATAATAACAATAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
3UTR CAA 72 bp GTAGTTCTAAAAGCATTGTCTCTTGAGCAGTCTACATaGACAGCAGCATGTATGTATTGGTACTCCTATTCA +
Preference number: 4 (lower is better)
Translates to: VVLKALSLEQST*TAACMYWYSYS
Trigger: TGAATAGGAGTACCAATACATACATGCTGCTGTCAATGTAGACTGCTCAAGAGACAATGCTTTTAGAACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 72 bp CAATATGAGCATCTTGGTCAATGTATGGTGGAGATATaGCCATCCATATTCCACAAAGAAGAAGTTGGATCA +
Preference number: 4 (lower is better)
Translates to: QYEHLGQCMVEI*PSIFHKEEVGS
Trigger: TGATCCAACTTCTTCTTTGTGGAATATGGATGGCAATATCTCCACCATACATTGACCAAGATGCTCATATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR TCA 90 bp GCTTTAAGTTCAAACAATATTTTGGTGGAAATCTTAGTTCATGTGTCCCCAGGAGAATTTGACAAAAGATaGAGTCCATGTGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: ALSSNNILVEILVHVSPGEFDKR*SPCGRN
Trigger: ATTCCTGCCACATGGACTTCATCTTTTGTCAAATTC...TCCTGGGGACACATGAACTAAGATTTCCACCAAAATATTGTTTGAACTTAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR GCA 90 bp CCCATATGTGGCTTAATGAACAACAATCTTTACCACTGCCTATTTTCATTCACTGCTCTTCTCTGTATTTaGATAATGACTCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: PICGLMNNNLYHCLFSFTALLCI*IMTLWT
Trigger: TGTCCAGAGAGTCATTATGCAAATACAGAGAAGAGC...AGTGAATGAAAATAGGCAGTGGTAAAGATTGTTGTTCATTAAGCCACATATGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR TCA 90 bp GCTTTAAGTTCAAACAATATTTTGGTGGAAATCTTAGTTCATGTGTCCCCAGGATATGGTATAGTTGAATaGGGCCTTTTCTTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: ALSSNNILVEILVHVSPGYGIVE*GLFFSV
Trigger: CACTGAAAAGAAAAGGCCTCATTCAACTATACCATA...TCCTGGGGACACATGAACTAAGATTTCCACCAAAATATTGTTTGAACTTAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR GCA 90 bp ATATGCTCCATTAACAGTCACCTCATTTCTTGTAGACATGAGCAATTTGGGGTTACTTTTGATAGCAGTTaGTCTTCTCTGTATTTGCAT +
Preference number: 4 (lower is better)
Translates to: ICSINSHLISCRHEQFGVTFDSS*SSLYLH
Trigger: ATGCAAATACAGAGAAGAGCAACTGCTATCAAAAGT...AACCCCAAATTGCTCATGTCTACAAGAAATGAGGTGACTGTTAATGGAGCATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR CCA 90 bp GCTTTAAGTTCAAACAATATTTTGGTGGAAATCTTAGTTCATGTGTCCCCAGGACAGAAGAGACAAATTTaGGAATTTGCAAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: ALSSNNILVEILVHVSPGQKRQI*EFARAR
Trigger: TCTTGCTCTTGCAAATTCCCAAATTTGTCTCTTCTG...TCCTGGGGACACATGAACTAAGATTTCCACCAAAATATTGTTTGAACTTAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR GCA 90 bp GCTTTAAGTTCAAACAATATTTTGGTGGAAATCTTAGTTCATGTGTCCCCAGGACATGTCAATAACCTTTaGCCAATATTTCGCATTAGA +
Preference number: 4 (lower is better)
Translates to: ALSSNNILVEILVHVSPGHVNNL*PIFRIR
Trigger: TCTAATGCGAAATATTGGGCAAAGGTTATTGACATG...TCCTGGGGACACATGAACTAAGATTTCCACCAAAATATTGTTTGAACTTAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
3UTR CAA 72 bp ACCATCCCTTTTTCTTATAAGCAGGAGAAATCTGGATaGAACTCCATATGTCTGTTTATTGCTGTGATGTTT +
Preference number: 4 (lower is better)
Translates to: TIPFSYKQEKSG*NSICLFIAVMF
Trigger: AAACATCACAGCAATAAACAGACATATGGAGTTCAATCCAGATTTCTCCTGCTTATAAGAAAAAGGGATGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 72 bp AATACCAGCATACTTAGTGAGATAAATTTGGATTCGTaGAATGTATCAGGCAAATTTCTTGACAAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: NTSILSEINLDS*NVSGKFLDKKA
Trigger: GGCCTTCTTGTCAAGAAATTTGCCTGATACATTCAACGAATCCAAATTTATCTCACTAAGTATGCTGGTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 72 bp TATGATCCTAACATGAAGGTCTGCTTTATTGGATCTTaGTCAAACAGTTGTACTAGCTTTTTAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: YDPNMKVCFIGS*SNSCTSFLTFP
Trigger: AGGGAAAGTTAAAAAGCTAGTACAACTGTTTGACAAAGATCCAATAAAGCAGACCTTCATGTTAGGATCATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 72 bp GTTGACTGCTTCAAAGTTTACTTTGTTATGATTATGTaGTTCCTTTGTAAGTCCAAAAGCAGATCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: VDCFKVYFVMIM*FLCKSKSRSPK
Trigger: TTTGGGAGATCTGCTTTTGGACTTACAAAGGAACAACATAATCATAACAAAGTAAACTTTGAAGCAGTCAAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 72 bp CAAAGAAGAGAGAGTATCCTCAACAAATGGTACGCTTaGAACTGTAAGTCTACATGTAGAAGAATGAAAATT +
Preference number: 4 (lower is better)
Translates to: QRRESILNKWYA*NCKSTCRRMKI
Trigger: AATTTTCATTCTTCTACATGTAGACTTACAGTTCAAAGCGTACCATTTGTTGAGGATACTCTCTCTTCTTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 72 bp GTCCAACATGTTGCTGTTTTTAATATTGTAGAAGATTaGAGATCTTGCAATATTGAGAGGACAGCAGCTATT +
Preference number: 4 (lower is better)
Translates to: VQHVAVFNIVED*RSCNIERTAAI
Trigger: AATAGCTGCTGTCCTCTCAATATTGCAAGATCTCAAATCTTCTACAATATTAAAAACAGCAACATGTTGGAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 72 bp ATTATTATGTTGGTGTCATCCATATTTTCCCAGAATTaGACAAAAGATGAAGTCCATGTGGCAGGAATCATT +
Preference number: 4 (lower is better)
Translates to: IIMLVSSIFSQN*TKDEVHVAGII
Trigger: AATGATTCCTGCCACATGGACTTCATCTTTTGTCAAATTCTGGGAAAATATGGATGACACCAACATAATAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
3UTR CAA 72 bp ACACAGAAGAATACCAGCATACTTAGTGAGATAAATTaGGATTCGTTGAATGTATCAGGCAAATTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: TQKNTSILSEIN*DSLNVSGKFLD
Trigger: GTCAAGAAATTTGCCTGATACATTCAACGAATCCAAATTTATCTCACTAAGTATGCTGGTATTCTTCTGTGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR CAA 90 bp GAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCTCTCTCCAGTCTAAACTGTaGACTCTCACCTCAATATCC +
Preference number: 5 (lower is better)
Translates to: EQELMQRPWRDVLYWLASLQSKL*TLTSIS
Trigger: GGATATTGAGGTGAGAGTCAACAGTTTAGACTGGAG...AGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR CAA 90 bp GCACCATGTTTGAGGCAACTCTCCTTGAGCTTCTCCACCGATGTGCCCTCGGTCTCAGAAGAGACAAATTaGGGAATTTGCAAGAGCAAG +
Preference number: 5 (lower is better)
Translates to: APCLRQLSLSFSTDVPSVSEETN*GICKSK
Trigger: CTTGCTCTTGCAAATTCCCAAATTTGTCTCTTCTGA...GACCGAGGGCACATCGGTGGAGAAGCTCAAGGAGAGTTGCCTCAAACATGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR CAA 90 bp CTCAGGAAAGCCCATCTCTGTGAGCTGCCACAAGGCATTCTCATCCATTCGCTCTTCATTTTCACACGGTaGTGTTTGAAGTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LRKAHLCELPQGILIHSLFIFTR*CLKLLK
Trigger: CTTCAGCAACTTCAAACACAACCGTGTGAAAATGAA...GAGCGAATGGATGAGAATGCCTTGTGGCAGCTCACAGAGATGGGCTTTCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR CAA 90 bp ATGGAGGGACCCATGGCTCCAGCTGTTTTTATAGCACAGGATGGCCTTGTTAGATGCTCTTCTCTGTATTaGCATAATGACTCTCTGGAC +
Preference number: 5 (lower is better)
Translates to: MEGPMAPAVFIAQDGLVRCSSLY*HNDSLD
Trigger: GTCCAGAGAGTCATTATGCAAATACAGAGAAGAGCA...TCTAACAAGGCCATCCTGTGCTATAAAAACAGCTGGAGCCATGGGTCCCTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR CAA 90 bp GATATCCCCATAGATACTTGGATGCCTCTTATGTCCCAGTACTCTGTCTCTTCCCAAAGAAGCATTTGTTaGACAGCTGTCCAAAACTTG +
Preference number: 5 (lower is better)
Translates to: DIPIDTWMPLMSQYSVSSQRSIC*TAVQNL
Trigger: CAAGTTTTGGACAGCTGTCAAACAAATGCTTCTTTG...GGAAGAGACAGAGTACTGGGACATAAGAGGCATCCAAGTATCTATGGGGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR CAA 90 bp TTCATTATTGTTATTATTTCCCCCTCAATAATCCTTCCCCCTATACTCCCTACCTCCACAAAGAAGAAGTaGGATCAGGGTGCAGATAGG +
Preference number: 5 (lower is better)
Translates to: FIIVIISPSIILPPILPTSTKKK*DQGADR
Trigger: CCTATCTGCACCCTGATCCAACTTCTTCTTTGTGGA...GGTAGGGAGTATAGGGGGAAGGATTATTGAGGGGGAAATAATAACAATAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR CAA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTTCAGAAGAGACAAATTaGGGAATTTGCAAGAGCAAG +
Preference number: 5 (lower is better)
Translates to: WPLLEELHFCLNPFALVSSEETN*GICKSK
Trigger: CTTGCTCTTGCAAATTCCCAAATTTGTCTCTTCTGA...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000042090.8
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR CAA 90 bp TGGCCGTTGCTCGAAGAACTGCATTTTTGTCTGAATCCTTTTGCTCTTGTTTCTCATAGGAAACAGAATTaGAGTGTGATGAGCAAAGTG +
Preference number: 5 (lower is better)
Translates to: WPLLEELHFCLNPFALVSHRKQN*SVMSKV
Trigger: CACTTTGCTCATCACACTCAAATTCTGTTTCCTATG...AGAAACAAGAGCAAAAGGATTCAGACAAAAATGCAGTTCTTCGAGCAACGGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS CCA 90 bp ACCACGGTCACTCAAGAAAGGATCATAAGGTCCAAAAGTAATCTGTaGAAATTTAAAGAGTTGAAGCAATGTCCCAATTTGGGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: TTVTQERIIRSKSNL*KFKELKQCPNLGRS
Trigger: ACTTCTGCCCAAATTGGGACATTGCTTCAACTCTTTAAATTTCCACAGATTACTTTTGGACCTTATGATCCTTTCTTGAGTGACCGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR CAA 90 bp CCCATATGTGGCTTAATGAACAACAATCTTTACCACTGCCTATTTTCATTCACTCGGTTGTGTTTGAAGTaGCTGAAGTCTCATCTCATG +
Preference number: 5 (lower is better)
Translates to: PICGLMNNNLYHCLFSFTRLCLK*LKSHLM
Trigger: CATGAGATGAGACTTCAGCAACTTCAAACACAACCG...AGTGAATGAAAATAGGCAGTGGTAAAGATTGTTGTTCATTAAGCCACATATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR CAA 90 bp CCATATTCCACAAAGAAGAAGTTGGATCAGGGTGCAGATAGGAATGATATAGTTTCAGAAGAGACAAATTaGGGAATTTGCAAGAGCAAG +
Preference number: 5 (lower is better)
Translates to: PYSTKKKLDQGADRNDIVSEETN*GICKSK
Trigger: CTTGCTCTTGCAAATTCCCAAATTTGTCTCTTCTGA...AACTATATCATTCCTATCTGCACCCTGATCCAACTTCTTCTTTGTGGAATATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233421.2
ENSMUST00000233836.2
CDS-3UTR CAA 90 bp GCTTTAAGTTCAAACAATATTTTGGTGGAAATCTTAGTTCATGTGTCCCCAGGAATGTTGGGTAAAAGATaGGGATTCCCATTGATCTCC +
Preference number: 5 (lower is better)
Translates to: ALSSNNILVEILVHVSPGMLGKR*GFPLIS
Trigger: GGAGATCAATGGGAATCCCAATCTTTTACCCAACAT...TCCTGGGGACACATGAACTAAGATTTCCACCAAAATATTGTTTGAACTTAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000042090.8
ENSMUST00000233836.2
CDS-3UTR CAA 90 bp TGCATTAGTAAAGGTGACAATTTCCTAAAGAGAACACCGATGGCTCAGACTCTAAATCCAAGAGATATGTaGGGTAAAAGATTGGGATTC +
Preference number: 5 (lower is better)
Translates to: CISKGDNFLKRTPMAQTLNPRDM*GKRLGF
Trigger: GAATCCCAATCTTTTACCCAACATATCTCTTGGATT...TAGAGTCTGAGCCATCGGTGTTCTCTTTAGGAAATTGTCACCTTTACTAATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042090.8
ENSMUST00000233836.2
CDS-3UTR CAA 90 bp ATCAATAACAAGACATCCTGGTCCTGGATGTTTTCTTCCAAGATTGTTTTGCTGTCATTAGAAATCTCATaGTCTGCACAGGGAGTACAA +
Preference number: 5 (lower is better)
Translates to: INNKTSWSWMFSSKIVLLSLEIS*SAQGVQ
Trigger: TTGTACTCCCTGTGCAGACAATGAGATTTCTAATGA...CAGCAAAACAATCTTGGAAGAAAACATCCAGGACCAGGATGTCTTGTTATTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR CAA 90 bp GGATCTTTGTCAAACAGTTGTACTAGCTTTTTAACTTTCCCTCTTCCCATTATATTCACACGGTTGTGTTaGAAGTTGCTGAAGTCTCAT +
Preference number: 5 (lower is better)
Translates to: GSLSNSCTSFLTFPLPIIFTRLC*KLLKSH
Trigger: ATGAGACTTCAGCAACTTCAAACACAACCGTGTGAA...TATAATGGGAAGAGGGAAAGTTAAAAAGCTAGTACAACTGTTTGACAAAGATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR CAA 90 bp CCCATATGTGGCTTAATGAACAACAATCTTTACCACTGCCTATTTTCATTCACTTGTATGGTGGAGATATaGCCATCCATATTCCACAAA +
Preference number: 5 (lower is better)
Translates to: PICGLMNNNLYHCLFSFTCMVEI*PSIFHK
Trigger: TTTGTGGAATATGGATGGCAATATCTCCACCATACA...AGTGAATGAAAATAGGCAGTGGTAAAGATTGTTGTTCATTAAGCCACATATGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS-3UTR CAA 90 bp ACTCAAATTTACTGTAGTAAAGTCTGGATGTGTTGTAGAGAAAAGCAATCCGAATTCAATATGAGCATCTaGGTCAATGTATGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: TQIYCSKVWMCCREKQSEFNMSI*VNVWWR
Trigger: TCTCCACCATACATTGACCAAGATGCTCATATTGAA...TTCGGATTGCTTTTCTCTACAACACATCCAGACTTTACTACAGTAAATTTGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS TCA 90 bp TTTAAAGAGTTGAAGCAATGTCCCAATTTGGGCAGAAGTTATCCATaGTGTTCCTGTGATTGCAGCAGTGAAATTACTCTTTTTACAATT +
Preference number: 5 (lower is better)
Translates to: FKELKQCPNLGRSYP*CSCDCSSEITLFTI
Trigger: AATTGTAAAAAGAGTAATTTCACTGCTGCAATCACAGGAACATCATGGATAACTTCTGCCCAAATTGGGACATTGCTTCAACTCTTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042090.8
ENSMUST00000233836.2
CDS-3UTR CAA 90 bp GGATCTTTGTCAAACAGTTGTACTAGCTTTTTAACTTTCCCTCTTCCCATTATAACAATAGGAGTGTCTTaGTGTTTCACAAATATGCCA +
Preference number: 5 (lower is better)
Translates to: GSLSNSCTSFLTFPLPIITIGVS*CFTNMP
Trigger: TGGCATATTTGTGAAACACAAAGACACTCCTATTGT...TATAATGGGAAGAGGGAAAGTTAAAAAGCTAGTACAACTGTTTGACAAAGATCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS TCA 72 bp TTGAAGCAATGTCCCAATTTGGGCAGAAGTTATCCATaGTGTTCCTGTGATTGCAGCAGTGAAATTACTCTT +
Preference number: 6 (lower is better)
Translates to: LKQCPNLGRSYP*CSCDCSSEITL
Trigger: AAGAGTAATTTCACTGCTGCAATCACAGGAACATCATGGATAACTTCTGCCCAAATTGGGACATTGCTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042090.8
ENSMUST00000233836.2
CDS CAA 72 bp ATAAGGTCCAAAAGTAATCTGTGGAAATTTAAAGAGTaGAAGCAATGTCCCAATTTGGGCAGAAGTTATCCA +
Preference number: 6 (lower is better)
Translates to: IRSKSNLWKFKE*KQCPNLGRSYP
Trigger: TGGATAACTTCTGCCCAAATTGGGACATTGCTTCAACTCTTTAAATTTCCACAGATTACTTTTGGACCTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8
CDS CCA 72 bp ACTCAAGAAAGGATCATAAGGTCCAAAAGTAATCTGTaGAAATTTAAAGAGTTGAAGCAATGTCCCAATTTG +
Preference number: 6 (lower is better)
Translates to: TQERIIRSKSNL*KFKELKQCPNL
Trigger: CAAATTGGGACATTGCTTCAACTCTTTAAATTTCCACAGATTACTTTTGGACCTTATGATCCTTTCTTGAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042090.8