RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN2R103 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000091771

Ensembl transcript IDs: ENSMUST00000172203.2

Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp TGCACTTGTAGCAGCAGATGGCCTTGCCCTCCAAGGCTACTTTCCTaGATCCAGGCTCACAACTCTCACTGCACACAGACTGGGGGATCT +
Preference number: 5 (lower is better)
Translates to: CTCSSRWPCPPRLLS*IQAHNSHCTQTGGS
Trigger: AGATCCCCCAGTCTGTGTGCAGTGAGAGTTGTGAGCCTGGATTCAGGAAAGTAGCCTTGGAGGGCAAGGCCATCTGCTGCTACAAGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS TCA 90 bp GGCCAAGAAGCAGAGATATCCCAGGACAGAGTGGAAGGCAACAGCTaGGCCCTTATTGCACAAAATGATGATGTGTCCATGTTCAGTATG +
Preference number: 5 (lower is better)
Translates to: GQEAEISQDRVEGNS*ALIAQNDDVSMFSM
Trigger: CATACTGAACATGGACACATCATCATTTTGTGCAATAAGGGCTCAGCTGTTGCCTTCCACTCTGTCCTGGGATATCTCTGCTTCTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS TCA 90 bp ACTGCAAAGGTAGTCTGCTGGAGAATGCAGGTAGCTGTGTTTGGCTaGCCAATGAAGTTCAAAGAACACAGGAAACAGAATGTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: TAKVVCWRMQVAVFG*PMKFKEHRKQNVSV
Trigger: CACACTCACATTCTGTTTCCTGTGTTCTTTGAACTTCATTGGTCAGCCAAACACAGCTACCTGCATTCTCCAGCAGACTACCTTTGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CCA 90 bp AGTAACTGCAAAGGTAGTCTGCTGGAGAATGCAGGTAGCTGTGTTTaGCTGACCAATGAAGTTCAAAGAACACAGGAAACAGAATGTGAG +
Preference number: 5 (lower is better)
Translates to: SNCKGSLLENAGSCV*LTNEVQRTQETECE
Trigger: CTCACATTCTGTTTCCTGTGTTCTTTGAACTTCATTGGTCAGCCAAACACAGCTACCTGCATTCTCCAGCAGACTACCTTTGCAGTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS GCA 90 bp CACCTTTTGTCTTTCACTTCAGTGTCCTTCAGGAATCTGTTAAGCTaGCATGGAAAGAACACCATCCCTTCTCCATTTTCATATGGTTGC +
Preference number: 5 (lower is better)
Translates to: HLLSFTSVSFRNLLS*HGKNTIPSPFSYGC
Trigger: GCAACCATATGAAAATGGAGAAGGGATGGTGTTCTTTCCATGGCAGCTTAACAGATTCCTGAAGGACACTGAAGTGAAAGACAAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CCA 90 bp ATAGAAAATACTTCCATAGAGACCATGATCTTCCCTTTAGTGCTGTaGAAGACAGGCAGAAAAGTGACCCAGACACAGAAGAACACTAGC +
Preference number: 5 (lower is better)
Translates to: IENTSIETMIFPLVL*KTGRKVTQTQKNTS
Trigger: GCTAGTGTTCTTCTGTGTCTGGGTCACTTTTCTGCCTGTCTTCCACAGCACTAAAGGGAAGATCATGGTCTCTATGGAAGTATTTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS GCA 90 bp CATGGAGGCTGTGAGCCACAGCATACACACCATTGTAAATACTTGTaGTCTCTGCATTCATGGATAAATCAAATATGTGACGAGGGAATA +
Preference number: 5 (lower is better)
Translates to: HGGCEPQHTHHCKYL*SLHSWINQICDEGI
Trigger: TATTCCCTCGTCACATATTTGATTTATCCATGAATGCAGAGAGCACAAGTATTTACAATGGTGTGTATGCTGTGGCTCACAGCCTCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS GCA 90 bp GAATGTGAGTGTGAGGAGCAAAATGTAACTGAGAGCTCGATTATTTaGCTTTACAATCGGAGTGTCTCTGTGTTTCACAAAGATGCCAAT +
Preference number: 5 (lower is better)
Translates to: ECECEEQNVTESSII*LYNRSVSVFHKDAN
Trigger: ATTGGCATCTTTGTGAAACACAGAGACACTCCGATTGTAAAGGCAAATAATCGAGCTCTCAGTTACATTTTGCTCCTCACACTCACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS GCA 90 bp ATGTGGCATTTTCTTCTCAGTGTAGAAAGTATGAAGAGGGAAAAATaGACCAACCACAACATCTCCTTCATGGTGAAATTCTTCAGTGAC +
Preference number: 5 (lower is better)
Translates to: MWHFLLSVESMKREK*TNHNISFMVKFFSD
Trigger: GTCACTGAAGAATTTCACCATGAAGGAGATGTTGTGGTTGGTGCATTTTTCCCTCTTCATACTTTCTACACTGAGAAGAAAATGCCACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CCA 90 bp GATGATGTGTCCATGTTCAGTATGAGCATCTTGATCAATGAATGGTaGAGAAGTTGTCATCCATATTCCACAAATAAGAAGCTGGATCAG +
Preference number: 5 (lower is better)
Translates to: DDVSMFSMSILINEW*RSCHPYSTNKKLDQ
Trigger: CTGATCCAGCTTCTTATTTGTGGAATATGGATGACAACTTCTCCACCATTCATTGATCAAGATGCTCATACTGAACATGGACACATCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CCA 90 bp CCACAGCATACACACCATTGTAAATACTTGTGCTCTCTGCATTCATaGATAAATCAAATATGTGACGAGGGAATACATCCAAAGAAGCAT +
Preference number: 5 (lower is better)
Translates to: PQHTHHCKYLCSLHS*INQICDEGIHPKKH
Trigger: ATGCTTCTTTGGATGTATTCCCTCGTCACATATTTGATTTATCCATGAATGCAGAGAGCACAAGTATTTACAATGGTGTGTATGCTGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CCA 90 bp TTTTTGGAAGCAGTTGTTCCTCTCTGTATTTGCATAATGACCTTCTaGACACTTCACACACTGGTATACATCTGTCTCATTAGAAATCTC +
Preference number: 5 (lower is better)
Translates to: FLEAVVPLCICIMTF*TLHTLVYICLIRNL
Trigger: GAGATTTCTAATGAGACAGATGTATACCAGTGTGTGAAGTGTCCAGAAGGTCATTATGCAAATACAGAGAGGAACAACTGCTTCCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS TCA 90 bp AATCAAAACCAAGAGATGTGTTGGGTAATAGATTGGGATTCCTATTaGTCTCCTCAATGGAAAATTGCAGAGCGAGAATATACTTGTAAT +
Preference number: 5 (lower is better)
Translates to: NQNQEMCWVIDWDSY*SPQWKIAEREYTCN
Trigger: ATTACAAGTATATTCTCGCTCTGCAATTTTCCATTGAGGAGATCAATAGGAATCCCAATCTATTACCCAACACATCTCTTGGTTTTGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS TCA 90 bp AGGATAATTCTTTCTAGAGTATGTTTTCTTCCGCACATGAGTAAATaGATTGTTCTCTGGTTTCAACAAGATAATGTAACACTTGGGACC +
Preference number: 5 (lower is better)
Translates to: RIILSRVCFLPHMSK*IVLWFQQDNVTLGT
Trigger: GGTCCCAAGTGTTACATTATCTTGTTGAAACCAGAGAACAATTCATTTACTCATGTGCGGAAGAAAACATACTCTAGAAAGAATTATCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS TCA 72 bp AGCAGCAGATGGCCTTGCCCTCCAAGGCTACTTTCCTaGATCCAGGCTCACAACTCTCACTGCACACAGACT +
Preference number: 6 (lower is better)
Translates to: SSRWPCPPRLLS*IQAHNSHCTQT
Trigger: AGTCTGTGTGCAGTGAGAGTTGTGAGCCTGGATTCAGGAAAGTAGCCTTGGAGGGCAAGGCCATCTGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS TCA 72 bp GCAGAGATATCCCAGGACAGAGTGGAAGGCAACAGCTaGGCCCTTATTGCACAAAATGATGATGTGTCCATG +
Preference number: 6 (lower is better)
Translates to: AEISQDRVEGNS*ALIAQNDDVSM
Trigger: CATGGACACATCATCATTTTGTGCAATAAGGGCTCAGCTGTTGCCTTCCACTCTGTCCTGGGATATCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS GCA 72 bp GGCCAACACAGTAGCAAGAGCCATAGTGAAAGTAACTaGAAAGGTAGTCTGCTGGAGAATGCAGGTAGCTGT +
Preference number: 6 (lower is better)
Translates to: GQHSSKSHSESN*KGSLLENAGSC
Trigger: ACAGCTACCTGCATTCTCCAGCAGACTACCTTTGCAGTTACTTTCACTATGGCTCTTGCTACTGTGTTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CCA 72 bp CTGAATCCAGGCTCACAACTCTCACTGCACACAGACTaGGGGATCTCTGAAAATATTTCTGGCCATTGTATC +
Preference number: 6 (lower is better)
Translates to: LNPGSQLSLHTD*GISENISGHCI
Trigger: GATACAATGGCCAGAAATATTTTCAGAGATCCCCCAGTCTGTGTGCAGTGAGAGTTGTGAGCCTGGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CAA 90 bp CCATGGAAAGAACACCATCCCTTCTCCATTTTCATATGGTTGCATTaGAAGTTGCTGAAGTCTTATCTCATGGAGGCTGTGAGCCACAGC +
Preference number: 6 (lower is better)
Translates to: PWKEHHPFSIFIWLH*KLLKSYLMEAVSHS
Trigger: GCTGTGGCTCACAGCCTCCATGAGATAAGACTTCAGCAACTTCAAATGCAACCATATGAAAATGGAGAAGGGATGGTGTTCTTTCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CAA 90 bp AAGCTGCCATGGAAAGAACACCATCCCTTCTCCATTTTCATATGGTaGCATTTGAAGTTGCTGAAGTCTTATCTCATGGAGGCTGTGAGC +
Preference number: 6 (lower is better)
Translates to: KLPWKEHHPFSIFIW*HLKLLKSYLMEAVS
Trigger: GCTCACAGCCTCCATGAGATAAGACTTCAGCAACTTCAAATGCAACCATATGAAAATGGAGAAGGGATGGTGTTCTTTCCATGGCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS TCA 72 bp CTCACAACTCTCACTGCACACAGACTGGGGGATCTCTaGAAATATTTCTGGCCATTGTATCATCTGTTCAGA +
Preference number: 6 (lower is better)
Translates to: LTTLTAHRLGDL*KYFWPLYHLFR
Trigger: TCTGAACAGATGATACAATGGCCAGAAATATTTTCAGAGATCCCCCAGTCTGTGTGCAGTGAGAGTTGTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS TCA 72 bp GTAGTCTGCTGGAGAATGCAGGTAGCTGTGTTTGGCTaGCCAATGAAGTTCAAAGAACACAGGAAACAGAAT +
Preference number: 6 (lower is better)
Translates to: VVCWRMQVAVFG*PMKFKEHRKQN
Trigger: ATTCTGTTTCCTGTGTTCTTTGAACTTCATTGGTCAGCCAAACACAGCTACCTGCATTCTCCAGCAGACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CCA 72 bp AAAGGTAGTCTGCTGGAGAATGCAGGTAGCTGTGTTTaGCTGACCAATGAAGTTCAAAGAACACAGGAAACA +
Preference number: 6 (lower is better)
Translates to: KGSLLENAGSCV*LTNEVQRTQET
Trigger: TGTTTCCTGTGTTCTTTGAACTTCATTGGTCAGCCAAACACAGCTACCTGCATTCTCCAGCAGACTACCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CAA 90 bp AAAGAACACCATCCCTTCTCCATTTTCATATGGTTGCATTTGAAGTaGCTGAAGTCTTATCTCATGGAGGCTGTGAGCCACAGCATACAC +
Preference number: 6 (lower is better)
Translates to: KEHHPFSIFIWLHLK*LKSYLMEAVSHSIH
Trigger: GTGTATGCTGTGGCTCACAGCCTCCATGAGATAAGACTTCAGCAACTTCAAATGCAACCATATGAAAATGGAGAAGGGATGGTGTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS TCA 72 bp GCAGATGCCTTTTCTCTCCATCTCCTCCCGAAAATCTaGTACAATATTATTTCCTTTGTGGTCATCAGGGAG +
Preference number: 6 (lower is better)
Translates to: ADAFSLHLLPKI*YNIISFVVIRE
Trigger: CTCCCTGATGACCACAAAGGAAATAATATTGTATCAGATTTTCGGGAGGAGATGGAGAGAAAAGGCATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CAA 72 bp AAACTGACCTTAAAGGCAAGGACCACAGTAATAGCTTaGGCCAACACAGTAGCAAGAGCCATAGTGAAAGTA +
Preference number: 6 (lower is better)
Translates to: KLTLKARTTVIA*ANTVARAIVKV
Trigger: TACTTTCACTATGGCTCTTGCTACTGTGTTGGCCAAAGCTATTACTGTGGTCCTTGCCTTTAAGGTCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CAA 90 bp AGTCATCCCCAAAGGGTCTTCATAGGCAAGAAAGATCACAGATTTTaGGAAGCAGTTGTTCCTCTCTGTATTTGCATAATGACCTTCTGG +
Preference number: 6 (lower is better)
Translates to: SHPQRVFIGKKDHRF*EAVVPLCICIMTFW
Trigger: CCAGAAGGTCATTATGCAAATACAGAGAGGAACAACTGCTTCCAAAAATCTGTGATCTTTCTTGCCTATGAAGACCCTTTGGGGATGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS GCA 72 bp CACAGATTTTTGGAAGCAGTTGTTCCTCTCTGTATTTaGATAATGACCTTCTGGACACTTCACACACTGGTA +
Preference number: 6 (lower is better)
Translates to: HRFLEAVVPLCI*IMTFWTLHTLV
Trigger: TACCAGTGTGTGAAGTGTCCAGAAGGTCATTATGCAAATACAGAGAGGAACAACTGCTTCCAAAAATCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS GCA 72 bp AATGTAACACTTGGGACCAAATATGAAGGCCAGGAGTaGTATGCTGGAAGCCAAGATAGAAAATACTTCCAT +
Preference number: 6 (lower is better)
Translates to: NVTLGTKYEGQE*YAGSQDRKYFH
Trigger: ATGGAAGTATTTTCTATCTTGGCTTCCAGCATAGCACTCCTGGCCTTCATATTTGGTCCCAAGTGTTACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CCA 72 bp TCCTCCCGAAAATCTGATACAATATTATTTCCTTTGTaGTCATCAGGGAGTATGAGACCAACCCATGACCAT +
Preference number: 6 (lower is better)
Translates to: SSRKSDTILFPL*SSGSMRPTHDH
Trigger: ATGGTCATGGGTTGGTCTCATACTCCCTGATGACCACAAAGGAAATAATATTGTATCAGATTTTCGGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CCA 72 bp GCAGTTGTTCCTCTCTGTATTTGCATAATGACCTTCTaGACACTTCACACACTGGTATACATCTGTCTCATT +
Preference number: 6 (lower is better)
Translates to: AVVPLCICIMTF*TLHTLVYICLI
Trigger: AATGAGACAGATGTATACCAGTGTGTGAAGTGTCCAGAAGGTCATTATGCAAATACAGAGAGGAACAACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS GCA 72 bp TGTGAGGAGCAAAATGTAACTGAGAGCTCGATTATTTaGCTTTACAATCGGAGTGTCTCTGTGTTTCACAAA +
Preference number: 6 (lower is better)
Translates to: CEEQNVTESSII*LYNRSVSVFHK
Trigger: TTTGTGAAACACAGAGACACTCCGATTGTAAAGGCAAATAATCGAGCTCTCAGTTACATTTTGCTCCTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CAA 72 bp GGCTGTGAGCCACAGCATACACACCATTGTAAATACTaGTGCTCTCTGCATTCATGGATAAATCAAATATGT +
Preference number: 6 (lower is better)
Translates to: GCEPQHTHHCKY*CSLHSWINQIC
Trigger: ACATATTTGATTTATCCATGAATGCAGAGAGCACAAGTATTTACAATGGTGTGTATGCTGTGGCTCACAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CCA 72 bp GTGTCCATGTTCAGTATGAGCATCTTGATCAATGAATaGTGGAGAAGTTGTCATCCATATTCCACAAATAAG +
Preference number: 6 (lower is better)
Translates to: VSMFSMSILINE*WRSCHPYSTNK
Trigger: CTTATTTGTGGAATATGGATGACAACTTCTCCACCATTCATTGATCAAGATGCTCATACTGAACATGGACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CCA 72 bp TCCATGTTCAGTATGAGCATCTTGATCAATGAATGGTaGAGAAGTTGTCATCCATATTCCACAAATAAGAAG +
Preference number: 6 (lower is better)
Translates to: SMFSMSILINEW*RSCHPYSTNKK
Trigger: CTTCTTATTTGTGGAATATGGATGACAACTTCTCCACCATTCATTGATCAAGATGCTCATACTGAACATGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CAA 72 bp CAAAATGATGATGTGTCCATGTTCAGTATGAGCATCTaGATCAATGAATGGTGGAGAAGTTGTCATCCATAT +
Preference number: 6 (lower is better)
Translates to: QNDDVSMFSMSI*INEWWRSCHPY
Trigger: ATATGGATGACAACTTCTCCACCATTCATTGATCAAGATGCTCATACTGAACATGGACACATCATCATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CAA 90 bp CTTATTGCACAAAATGATGATGTGTCCATGTTCAGTATGAGCATCTaGATCAATGAATGGTGGAGAAGTTGTCATCCATATTCCACAAAT +
Preference number: 6 (lower is better)
Translates to: LIAQNDDVSMFSMSI*INEWWRSCHPYSTN
Trigger: ATTTGTGGAATATGGATGACAACTTCTCCACCATTCATTGATCAAGATGCTCATACTGAACATGGACACATCATCATTTTGTGCAATAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CAA 90 bp TTATACCTTCTAGGGAATCAACATCTCCATAAACAATTGTTACATTaGTCTCATCCATATGTTCCCAGAATTTGGCAAAATGTGAAGTCC +
Preference number: 6 (lower is better)
Translates to: LYLLGNQHLHKQLLH*SHPYVPRIWQNVKS
Trigger: GGACTTCACATTTTGCCAAATTCTGGGAACATATGGATGAGACAAATGTAACAATTGTTTATGGAGATGTTGATTCCCTAGAAGGTATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CAA 72 bp TATGTGACGAGGGAATACATCCAAAGAAGCATTGGTTaGACAGTTTTCCAAAACATTACAATTAATGTCAGC +
Preference number: 6 (lower is better)
Translates to: YVTREYIQRSIG*TVFQNITINVS
Trigger: GCTGACATTAATTGTAATGTTTTGGAAAACTGTCAAACCAATGCTTCTTTGGATGTATTCCCTCGTCACATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2
CDS CAA 72 bp CTAGGGAATCAACATCTCCATAAACAATTGTTACATTaGTCTCATCCATATGTTCCCAGAATTTGGCAAAAT +
Preference number: 6 (lower is better)
Translates to: LGNQHLHKQLLH*SHPYVPRIWQN
Trigger: ATTTTGCCAAATTCTGGGAACATATGGATGAGACAAATGTAACAATTGTTTATGGAGATGTTGATTCCCTAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172203.2