Pregenerated sensors for VMN2R101 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094892Ensembl transcript IDs: ENSMUST00000171914.3
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AATAGCTTTGGCCAACACAGTAGCAAGAGCCACAGTGAAAGTAACTaGAAAGGTAGTCTGCTGAAGGATGCAGGTAGCTCTGTTTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: NSFGQHSSKSHSESN*KGSLLKDAGSSVWL Trigger: CAGCCAAACAGAGCTACCTGCATCCTTCAGCAGACTACCTTTGCAGTTACTTTCACTGTGGCTCTTGCTACTGTGTTGGCCAAAGCTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS TCA 90 bp | GGCCAAGAAACAGAGGTATCCCAGGACAGAGTGGAAGGCAACAGCTaGGCCCTTATTGCACAAAATGATGATGTGTCCATATTCAGTATG | + |
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Preference number: 5 (lower is better) Translates to: GQETEVSQDRVEGNS*ALIAQNDDVSIFSM Trigger: CATACTGAATATGGACACATCATCATTTTGTGCAATAAGGGCTCAGCTGTTGCCTTCCACTCTGTCCTGGGATACCTCTGTTTCTTGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS TCA 90 bp | GGGTCCAAATATGAAGGCAAGGAGTGCTGTGGTGGAAGCCAAGATTaGAAATACTTCCATAGCAACCATGATCTTCCCTTTAGTGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: GSKYEGKECCGGSQD*KYFHSNHDLPFSAV Trigger: CACAGCACTAAAGGGAAGATCATGGTTGCTATGGAAGTATTTTCAATCTTGGCTTCCACCACAGCACTCCTTGCCTTCATATTTGGACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CCA 90 bp | ATTGAAAATACTTCCATAGCAACCATGATCTTCCCTTTAGTGCTGTaGAAGACAGGAAGAAAAGTGAGCCAGACACAGAAGAACACCAGC | + |
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Preference number: 5 (lower is better) Translates to: IENTSIATMIFPLVL*KTGRKVSQTQKNTS Trigger: GCTGGTGTTCTTCTGTGTCTGGCTCACTTTTCTTCCTGTCTTCCACAGCACTAAAGGGAAGATCATGGTTGCTATGGAAGTATTTTCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS TCA 90 bp | TTTAAAGAGTTGAAGCAATGTCCCTATCTGGGCAGATGTTACCCATaGTGTTCCTGTGAGTGCTGCAGTGAAATTTCTCTTTTTACAACT | + |
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Preference number: 5 (lower is better) Translates to: FKELKQCPYLGRCYP*CSCECCSEISLFTT Trigger: AGTTGTAAAAAGAGAAATTTCACTGCAGCACTCACAGGAACATCATGGGTAACATCTGCCCAGATAGGGACATTGCTTCAACTCTTTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS GCA 90 bp | AAGGAACGTCATAGATTTTTGGAAGCAGGATTTCCTCTCTTTATTTaGATAATGACCTTCTGGACACTTCACACACTGGTAAACATCTGT | + |
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Preference number: 5 (lower is better) Translates to: KERHRFLEAGFPLFI*IMTFWTLHTLVNIC Trigger: ACAGATGTTTACCAGTGTGTGAAGTGTCCAGAAGGTCATTATGCAAATAAAGAGAGGAAATCCTGCTTCCAAAAATCTATGACGTTCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS GCA 90 bp | GAAGGTGAGTGTGATGAGCAAAATGTAACTGAGAGTTCGATTATTTaGCTTTACAATAGGGGTATCTCTGTGTTTCACAAAGATGCCAAT | + |
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Preference number: 5 (lower is better) Translates to: EGECDEQNVTESSII*LYNRGISVFHKDAN Trigger: ATTGGCATCTTTGTGAAACACAGAGATACCCCTATTGTAAAGGCAAATAATCGAACTCTCAGTTACATTTTGCTCATCACACTCACCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CCA 90 bp | TTTGTCTTTCAGTTCAATGTCTTTCAGGAAAGTGTTAAGCTCCCATaGAAAGAACAACATCCCTTCTCCATTTTCATATGGTTGCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: FVFQFNVFQESVKLP*KEQHPFSIFIWLPL Trigger: CAAAGGCAACCATATGAAAATGGAGAAGGGATGTTGTTCTTTCCATGGGAGCTTAACACTTTCCTGAAAGACATTGAACTGAAAGACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS TCA 90 bp | AAAATTCTTCCTTCTAGAGTGTGTTTTCTTCTGAATATGAGTAAATaGATTCTCCTCTGGTCTCAACAAGATAATGTAACACTTGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: KILPSRVCFLLNMSK*ILLWSQQDNVTLGS Trigger: GGACCCAAGTGTTACATTATCTTGTTGAGACCAGAGGAGAATTCATTTACTCATATTCAGAAGAAAACACACTCTAGAAGGAAGAATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS TCA 72 bp | AGCAGCAGATGGCCTTGCCCTCTAGGTTTACTTTCCTaGATCCAGGCTTACAACTCTCACTGCATACAGACT | + |
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Preference number: 6 (lower is better) Translates to: SSRWPCPLGLLS*IQAYNSHCIQT Trigger: AGTCTGTATGCAGTGAGAGTTGTAAGCCTGGATTCAGGAAAGTAAACCTAGAGGGCAAGGCCATCTGCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CAA 72 bp | CATCCCTTCTCCATTTTCATATGGTTGCCTTTGAAGTaGCTGACGTGTCATCTCATGGAGGCTGTGAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: HPFSIFIWLPLK*LTCHLMEAVSH Trigger: GTGGCTCACAGCCTCCATGAGATGACACGTCAGCAACTTCAAAGGCAACCATATGAAAATGGAGAAGGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CAA 90 bp | CCATGGAAAGAACAACATCCCTTCTCCATTTTCATATGGTTGCCTTaGAAGTTGCTGACGTGTCATCTCATGGAGGCTGTGAGCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: PWKEQHPFSIFIWLP*KLLTCHLMEAVSHS Trigger: GCTGTGGCTCACAGCCTCCATGAGATGACACGTCAGCAACTTCAAAGGCAACCATATGAAAATGGAGAAGGGATGTTGTTCTTTCCATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS TCA 72 bp | ACAGAGGTATCCCAGGACAGAGTGGAAGGCAACAGCTaGGCCCTTATTGCACAAAATGATGATGTGTCCATA | + |
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Preference number: 6 (lower is better) Translates to: TEVSQDRVEGNS*ALIAQNDDVSI Trigger: TATGGACACATCATCATTTTGTGCAATAAGGGCTCAGCTGTTGCCTTCCACTCTGTCCTGGGATACCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CAA 90 bp | AAAGAACAACATCCCTTCTCCATTTTCATATGGTTGCCTTTGAAGTaGCTGACGTGTCATCTCATGGAGGCTGTGAGCCACAGCATACAC | + |
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Preference number: 6 (lower is better) Translates to: KEQHPFSIFIWLPLK*LTCHLMEAVSHSIH Trigger: GTGTATGCTGTGGCTCACAGCCTCCATGAGATGACACGTCAGCAACTTCAAAGGCAACCATATGAAAATGGAGAAGGGATGTTGTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CAA 72 bp | GAACAACATCCCTTCTCCATTTTCATATGGTTGCCTTaGAAGTTGCTGACGTGTCATCTCATGGAGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: EQHPFSIFIWLP*KLLTCHLMEAV Trigger: CACAGCCTCCATGAGATGACACGTCAGCAACTTCAAAGGCAACCATATGAAAATGGAGAAGGGATGTTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CAA 90 bp | AGCCATCCCCAAAGGGTCTTCATAGGCAAGGAACGTCATAGATTTTaGGAAGCAGGATTTCCTCTCTTTATTTGCATAATGACCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SHPQRVFIGKERHRF*EAGFPLFICIMTFW Trigger: CCAGAAGGTCATTATGCAAATAAAGAGAGGAAATCCTGCTTCCAAAAATCTATGACGTTCCTTGCCTATGAAGACCCTTTGGGGATGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS TCA 72 bp | CTTACAACTCTCACTGCATACAGACTGGGGGATCTCTaGAAATGTTTCTGGCCATTGTATCATGTGTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: LTTLTAYRLGDL*KCFWPLYHVFR Trigger: TCTGAACACATGATACAATGGCCAGAAACATTTTCAGAGATCCCCCAGTCTGTATGCAGTGAGAGTTGTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CCA 72 bp | TCGTCCCTAAAATCTGATACAATCTTATTTCCTTTGTaGTCATCAGGGAGTATGAGACCAACCCATGACCAC | + |
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Preference number: 6 (lower is better) Translates to: SSLKSDTILFPL*SSGSMRPTHDH Trigger: GTGGTCATGGGTTGGTCTCATACTCCCTGATGACCACAAAGGAAATAAGATTGTATCAGATTTTAGGGACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CAA 72 bp | CCAAGAGATATGTTGGGTAGCAGATTGGGGTTCCCATaGATCTCCTCAATTGCAAATTGCAGAGCAAGAATA | + |
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Preference number: 6 (lower is better) Translates to: PRDMLGSRLGFP*ISSIANCRARI Trigger: TATTCTTGCTCTGCAATTTGCAATTGAGGAGATCAATGGGAACCCCAATCTGCTACCCAACATATCTCTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CAA 72 bp | TGGAAAGAACAACATCCCTTCTCCATTTTCATATGGTaGCCTTTGAAGTTGCTGACGTGTCATCTCATGGAG | + |
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Preference number: 6 (lower is better) Translates to: WKEQHPFSIFIW*PLKLLTCHLME Trigger: CTCCATGAGATGACACGTCAGCAACTTCAAAGGCAACCATATGAAAATGGAGAAGGGATGTTGTTCTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CAA 90 bp | GTGAGCCAGACACAGAAGAACACCAGCATACTGAATGACAGAAATTaGGATTCGTTGAATGTATCAGGCAAATTTCTAGACAAGAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: VSQTQKNTSILNDRN*DSLNVSGKFLDKKA Trigger: GGCCTTCTTGTCTAGAAATTTGCCTGATACATTCAACGAATCCAAATTTCTGTCATTCAGTATGCTGGTGTTCTTCTGTGTCTGGCTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS TCA 72 bp | CAAGAGATATGTTGGGTAGCAGATTGGGGTTCCCATTaGTCTCCTCAATTGCAAATTGCAGAGCAAGAATAT | + |
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Preference number: 6 (lower is better) Translates to: QEICWVADWGSH*SPQLQIAEQEY Trigger: ATATTCTTGCTCTGCAATTTGCAATTGAGGAGATCAATGGGAACCCCAATCTGCTACCCAACATATCTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS TCA 72 bp | AGTGAGCCAGACACAGAAGAACACCAGCATACTGAATaGCAGAAATTTGGATTCGTTGAATGTATCAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: SEPDTEEHQHTE*QKFGFVECIRQ Trigger: TTGCCTGATACATTCAACGAATCCAAATTTCTGTCATTCAGTATGCTGGTGTTCTTCTGTGTCTGGCTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CCA 72 bp | TTAATGAAACAATGGCAAGTGAAAGATATGTGTCCTTaGAGGCCATCTGGTAGAGAGAAGGATACTGATCAC | + |
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Preference number: 6 (lower is better) Translates to: LMKQWQVKDMCP*RPSGREKDTDH Trigger: GTGATCAGTATCCTTCTCTCTACCAGATGGCCTCCAAGGACACATATCTTTCACTTGCCATTGTTTCATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CCA 72 bp | CAGTTCAATGTCTTTCAGGAAAGTGTTAAGCTCCCATaGAAAGAACAACATCCCTTCTCCATTTTCATATGG | + |
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Preference number: 6 (lower is better) Translates to: QFNVFQESVKLP*KEQHPFSIFIW Trigger: CCATATGAAAATGGAGAAGGGATGTTGTTCTTTCCATGGGAGCTTAACACTTTCCTGAAAGACATTGAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS TCA 72 bp | TTATTGCACAAAATGATGATGTGTCCATATTCAGTATaGGCATCTAGGTCAATGAACGGTGGAGAAGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LLHKMMMCPYSV*ASRSMNGGEVV Trigger: GACAACTTCTCCACCGTTCATTGACCTAGATGCTCATACTGAATATGGACACATCATCATTTTGTGCAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS GCA 72 bp | CATAGATTTTTGGAAGCAGGATTTCCTCTCTTTATTTaGATAATGACCTTCTGGACACTTCACACACTGGTA | + |
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Preference number: 6 (lower is better) Translates to: HRFLEAGFPLFI*IMTFWTLHTLV Trigger: TACCAGTGTGTGAAGTGTCCAGAAGGTCATTATGCAAATAAAGAGAGGAAATCCTGCTTCCAAAAATCTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CCA 72 bp | TTGTTACATTTGTCTCATCCATATGTTCCCAGAATTTaGCAAAATGTGAAGTCCATGTGCCTGGGATCATTT | + |
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Preference number: 6 (lower is better) Translates to: LLHLSHPYVPRI*QNVKSMCLGSF Trigger: AAATGATCCCAGGCACATGGACTTCACATTTTGCCAAATTCTGGGAACATATGGATGAGACAAATGTAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CAA 72 bp | CAAAGGGTCTTCATAGGCAAGGAACGTCATAGATTTTaGGAAGCAGGATTTCCTCTCTTTATTTGCATAATG | + |
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Preference number: 6 (lower is better) Translates to: QRVFIGKERHRF*EAGFPLFICIM Trigger: CATTATGCAAATAAAGAGAGGAAATCCTGCTTCCAAAAATCTATGACGTTCCTTGCCTATGAAGACCCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CAA 72 bp | AACACCAGCATACTGAATGACAGAAATTTGGATTCGTaGAATGTATCAGGCAAATTTCTAGACAAGAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: NTSILNDRNLDS*NVSGKFLDKKA Trigger: GGCCTTCTTGTCTAGAAATTTGCCTGATACATTCAACGAATCCAAATTTCTGTCATTCAGTATGCTGGTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS TCA 72 bp | TGTATCATGTGTTCAGATAACGACAACTGTTTACCCTaGGGAGCATTTGCAGAAAAGGATCCTATTTTCATT | + |
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Preference number: 6 (lower is better) Translates to: CIMCSDNDNCLP*GAFAEKDPIFI Trigger: AATGAAAATAGGATCCTTTTCTGCAAATGCTCCTCAGGGTAAACAGTTGTCGTTATCTGAACACATGATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CAA 90 bp | ATGTCATACTCTGTATCTATTGTCTGTCTCCAATCTAAACTCCATTaGTCTTTCAGTTCAATGTCTTTCAGGAAAGTGTTAAGCTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: MSYSVSIVCLQSKLH*SFSSMSFRKVLSSH Trigger: ATGGGAGCTTAACACTTTCCTGAAAGACATTGAACTGAAAGACAAATGGAGTTTAGATTGGAGACAGACAATAGATACAGAGTATGACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS GCA 72 bp | TGTGATGAGCAAAATGTAACTGAGAGTTCGATTATTTaGCTTTACAATAGGGGTATCTCTGTGTTTCACAAA | + |
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Preference number: 6 (lower is better) Translates to: CDEQNVTESSII*LYNRGISVFHK Trigger: TTTGTGAAACACAGAGATACCCCTATTGTAAAGGCAAATAATCGAACTCTCAGTTACATTTTGCTCATCACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS TCA 72 bp | CCTTCTAGAGTGTGTTTTCTTCTGAATATGAGTAAATaGATTCTCCTCTGGTCTCAACAAGATAATGTAACA | + |
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Preference number: 6 (lower is better) Translates to: PSRVCFLLNMSK*ILLWSQQDNVT Trigger: TGTTACATTATCTTGTTGAGACCAGAGGAGAATTCATTTACTCATATTCAGAAGAAAACACACTCTAGAAGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CAA 72 bp | CTAGCGAATCAACATCACCATAAACAATTGTTACATTaGTCTCATCCATATGTTCCCAGAATTTGGCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: LANQHHHKQLLH*SHPYVPRIWQN Trigger: ATTTTGCCAAATTCTGGGAACATATGGATGAGACAAATGTAACAATTGTTTATGGTGATGTTGATTCGCTAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CAA 72 bp | TTACACCTTCTAGCGAATCAACATCACCATAAACAATaGTTACATTTGTCTCATCCATATGTTCCCAGAATT | + |
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Preference number: 6 (lower is better) Translates to: LHLLANQHHHKQ*LHLSHPYVPRI Trigger: AATTCTGGGAACATATGGATGAGACAAATGTAACAATTGTTTATGGTGATGTTGATTCGCTAGAAGGTGTAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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| CDS CAA 72 bp | TCTGTATCTATTGTCTGTCTCCAATCTAAACTCCATTaGTCTTTCAGTTCAATGTCTTTCAGGAAAGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: SVSIVCLQSKLH*SFSSMSFRKVL Trigger: TAACACTTTCCTGAAAGACATTGAACTGAAAGACAAATGGAGTTTAGATTGGAGACAGACAATAGATACAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171914.3 |
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