Pregenerated sensors for VMN2R10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067010Ensembl transcript IDs: ENSMUST00000079163.5, ENSMUST00000176594.3, ENSMUST00000233053.2
Found 230 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCACCTTAGTTCGCCAAATCTGCCCACCTGTCTGGGTTCTAGTCTaGGAGGCATCTTGGAATCTGGAAGGGAAGAGGGAACGAGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: PTLVRQICPPVWVLV*EASWNLEGKRERGC Trigger: GCAGCCTCGTTCCCTCTTCCCTTCCAGATTCCAAGATGCCTCCCAGACTAGAACCCAGACAGGTGGGCAGATTTGGCGAACTAAGGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR TCA 90 bp | AAGGCACCCATTCCCTCCAAATCATCCTTGGAGTCCAATTTCAGGTaGCCACGTGATAGCTCCGGAACAGCTGGGCGGCAGGCAGTAGCA | + |
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Preference number: 1 (lower is better) Translates to: KAPIPSKSSLESNFR*PRDSSGTAGRQAVA Trigger: TGCTACTGCCTGCCGCCCAGCTGTTCCGGAGCTATCACGTGGTCACCTGAAATTGGACTCCAAGGATGATTTGGAGGGAATGGGTGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR CCA 90 bp | CCGTTTCCCAGACCCACCTTAGTTCGCCAAATCTGCCCACCTGTCTaGGTTCTAGTCTGGGAGGCATCTTGGAATCTGGAAGGGAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: PFPRPTLVRQICPPV*VLVWEASWNLEGKR Trigger: CCTCTTCCCTTCCAGATTCCAAGATGCCTCCCAGACTAGAACCCAGACAGGTGGGCAGATTTGGCGAACTAAGGTGGGTCTGGGAAACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR GCA 90 bp | GTCTGGGAGGCATCTTGGAATCTGGAAGGGAAGAGGGAACGAGGCTaGGCGAGAAAGATGAAACCAAGAGAAGGGTCTGATCAAAGTTCA | + |
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Preference number: 1 (lower is better) Translates to: VWEASWNLEGKRERG*ARKMKPREGSDQSS Trigger: TGAACTTTGATCAGACCCTTCTCTTGGTTTCATCTTTCTCGCGCAGCCTCGTTCCCTCTTCCCTTCCAGATTCCAAGATGCCTCCCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR GCA 90 bp | GTGCACCAGACATTAGACAAAGACACAGAAATGGCAGAGCACTTCTaGTGTAAAGCCCAGAGAAAACAAAGCAGGGCACCCCTGAAATTT | + |
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Preference number: 1 (lower is better) Translates to: VHQTLDKDTEMAEHF*CKAQRKQSRAPLKF Trigger: AAATTTCAGGGGTGCCCTGCTTTGTTTTCTCTGGGCTTTACAGCAGAAGTGCTCTGCCATTTCTGTGTCTTTGTCTAATGTCTGGTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR CCA 90 bp | ATATCGCTAGAGACCCAGCCTCTTGGCCTGCCTTATGCCATGTGTTaGAAGGACTCTAAACCTGAGTTATCAATTTTAAGGCTAACCATC | + |
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Preference number: 1 (lower is better) Translates to: ISLETQPLGLPYAMC*KDSKPELSILRLTI Trigger: GATGGTTAGCCTTAAAATTGATAACTCAGGTTTAGAGTCCTTCCAACACATGGCATAAGGCAGGCCAAGAGGCTGGGTCTCTAGCGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR CCA 90 bp | ATGACACACAAAATATGGTCTGAAGAAGGATTACTGCACTGTGCATaGCAGCGTGGAAGGAAGAAAGCTTTCAAAGCTTCTACCCTACAC | + |
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Preference number: 1 (lower is better) Translates to: MTHKIWSEEGLLHCA*QRGRKKAFKASTLH Trigger: GTGTAGGGTAGAAGCTTTGAAAGCTTTCTTCCTTCCACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGTGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR GCA 90 bp | CATTCCTATCCAAATCCATGTAAAATGAAACATCAAGGAGACCATTaGATGGGACAAACGTGTGTCCTTGGTGGCTACCTGATGGACATA | + |
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Preference number: 1 (lower is better) Translates to: HSYPNPCKMKHQGDH*MGQTCVLGGYLMDI Trigger: TATGTCCATCAGGTAGCCACCAAGGACACACGTTTGTCCCATGCAATGGTCTCCTTGATGTTTCATTTTACATGGATTTGGATAGGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
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| 3UTR CCA 90 bp | CATGTTCAGATTGCATATCTCTGTTTCATTGGAAACTGCATTTTCTaGGCACTGATCACAATCAAAGCAGCAGTCTGCTGTTTGTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: HVQIAYLCFIGNCIF*ALITIKAAVCCLFL Trigger: CAGAAACAAACAGCAGACTGCTGCTTTGATTGTGATCAGTGCCCAGAAAATGCAGTTTCCAATGAAACAGAGATATGCAATCTGAACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
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| 3UTR TCA 90 bp | CAGATTCCATGTCTTTGCATTTCTTCTCTCATGTCTGATAGAAACTaGATACTCTGGTCATCATCTGAGATGACCATTCCTATCCAAATC | + |
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Preference number: 1 (lower is better) Translates to: QIPCLCISSLMSDRN*ILWSSSEMTIPIQI Trigger: GATTTGGATAGGAATGGTCATCTCAGATGATGACCAGAGTATTCAGTTTCTATCAGACATGAGAGAAGAAATGCAAAGACATGGAATCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
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| 3UTR CCA 90 bp | ATAATGATGGTCTTTCCATGTTCAGATTGCATATCTCTGTTTCATTaGAAACTGCATTTTCTGGGCACTGATCACAATCAAAGCAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: IMMVFPCSDCISLFH*KLHFLGTDHNQSSS Trigger: ACTGCTGCTTTGATTGTGATCAGTGCCCAGAAAATGCAGTTTCCAATGAAACAGAGATATGCAATCTGAACATGGAAAGACCATCATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
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| 3UTR CCA 90 bp | AAGTTAGCAATTTCACCTACATGGTGTGCAAAAGTGACAGTCCCTTaGAAGAAATCAAGGCTGAAATCATTTTTATTTGTGATAACGTCC | + |
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Preference number: 1 (lower is better) Translates to: KLAISPTWCAKVTVP*KKSRLKSFLFVITS Trigger: GGACGTTATCACAAATAAAAATGATTTCAGCCTTGATTTCTTCCAAGGGACTGTCACTTTTGCACACCATGTAGGTGAAATTGCTAACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
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| 3UTR CCA 90 bp | CTCACATATGTTACGCTCACCTTATTACATATTAAATTAGGTACATaGCTTACACACATACCTAGAGGTCAAAGTGTTGATAGCCATTCA | + |
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Preference number: 1 (lower is better) Translates to: LTYVTLTLLHIKLGT*LTHIPRGQSVDSHS Trigger: TGAATGGCTATCAACACTTTGACCTCTAGGTATGTGTGTAAGCCATGTACCTAATTTAATATGTAATAAGGTGAGCGTAACATATGTGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGAGGCCTTGGGCCTGTCACCCACAGGGTACCTCAGAGGGGCCCATATGTCTCCTCCACAACCACCATaGCCGTTCCCTGGGTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SEALGLSPTGYLRGAHMSPPQPP*PFPGCC Trigger: ACAGCACCCAGGGAACGGTCATGGTGGTTGTGGAGG...AGACATATGGGCCCCTCTGAGGTACCCTGTGGGTGACAGGCCCAAGGCCTCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGAGGCCTTGGGCCTGTCACCCACAGGGTACCTCAGAGGGGCCCATATGTCTCGCCTGTTTCCTGGTTaGAGCATGTGGCCGCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: SEALGLSPTGYLRGAHMSRLFPG*SMWPLS Trigger: TGAGAGCGGCCACATGCTTCAACCAGGAAACAGGCG...AGACATATGGGCCCCTCTGAGGTACCCTGTGGGTGACAGGCCCAAGGCCTCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR CAA 90 bp | CACCTCAGCCTAGTTTACCCTCAGCCTTGTTGTGGCTCTGAGGCCTaGGGCCTGTCACCCACAGGGTACCTCAGAGGGGCCCATATGTCT | + |
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Preference number: 2 (lower is better) Translates to: HLSLVYPQPCCGSEA*GLSPTGYLRGAHMS Trigger: AGACATATGGGCCCCTCTGAGGTACCCTGTGGGTGACAGGCCCAAGGCCTCAGAGCCACAACAAGGCTGAGGGTAAACTAGGCTGAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGGCCTTGGGCCTGTCACCCACAGGGTACCTCAGAGGGGCCCATATGTCTAAGAGGGAACGAGGCTaGGCGAGAAAGATGAAACCA | + |
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Preference number: 2 (lower is better) Translates to: SEALGLSPTGYLRGAHMSKRERG*ARKMKP Trigger: TGGTTTCATCTTTCTCGCGCAGCCTCGTTCCCTCTT...AGACATATGGGCCCCTCTGAGGTACCCTGTGGGTGACAGGCCCAAGGCCTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGAGGCCTTGGGCCTGTCACCCACAGGGTACCTCAGAGGGGCCCATATGTCTAATCTCAGGCCTCTGTaGTGGCCATCAACAATATGC | + |
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Preference number: 2 (lower is better) Translates to: SEALGLSPTGYLRGAHMSNLRPL*WPSTIC Trigger: GCATATTGTTGATGGCCATCACAGAGGCCTGAGATT...AGACATATGGGCCCCTCTGAGGTACCCTGTGGGTGACAGGCCCAAGGCCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGGCCTTGGGCCTGTCACCCACAGGGTACCTCAGAGGGGCCCATATGTCTCCTCCAAATCATCCTTaGAGTCCAATTTCAGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: SEALGLSPTGYLRGAHMSPPNHP*SPISGD Trigger: GTCACCTGAAATTGGACTCCAAGGATGATTTGGAGG...AGACATATGGGCCCCTCTGAGGTACCCTGTGGGTGACAGGCCCAAGGCCTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGAAAGCCACCTCAGCCTAGTTTACCCTCAGCCTTGTTGTGGCTCTGAGGCCAGGCATCTTGGAATCTaGAAGGGAAGAGGGAACGAG | + |
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Preference number: 2 (lower is better) Translates to: GESHLSLVYPQPCCGSEARHLGI*KGRGNE Trigger: CTCGTTCCCTCTTCCCTTCCAGATTCCAAGATGCCT...GGCCTCAGAGCCACAACAAGGCTGAGGGTAAACTAGGCTGAGGTGGCTTTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGAAAGCCACCTCAGCCTAGTTTACCCTCAGCCTTGTTGTGGCTCTGAGGCCGGACCAACAATCGGCTaGGAGGATGAGAAAAATGAC | + |
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Preference number: 2 (lower is better) Translates to: GESHLSLVYPQPCCGSEAGPTIG*EDEKND Trigger: GTCATTTTTCTCATCCTCCCAGCCGATTGTTGGTCC...GGCCTCAGAGCCACAACAAGGCTGAGGGTAAACTAGGCTGAGGTGGCTTTCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | CACACAAAATATGGTCTGAAGAAGGATTACTGCACTGTGCATGGCAGCGTGGAACCTCCACAACCACCATaGCCGTTCCCTGGGTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: HTKYGLKKDYCTVHGSVEPPQPP*PFPGCC Trigger: ACAGCACCCAGGGAACGGTCATGGTGGTTGTGGAGG...TTCCACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGAAAGCCACCTCAGCCTAGTTTACCCTCAGCCTTGTTGTGGCTCTGAGGCCCCTCCAAATCATCCTTaGAGTCCAATTTCAGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: GESHLSLVYPQPCCGSEAPPNHP*SPISGD Trigger: GTCACCTGAAATTGGACTCCAAGGATGATTTGGAGG...GGCCTCAGAGCCACAACAAGGCTGAGGGTAAACTAGGCTGAGGTGGCTTTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGAGGCCTTGGGCCTGTCACCCACAGGGTACCTCAGAGGGGCCCATATGTCTAATAATGCTGATTATTaGCTTCATGCCTGTGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: SEALGLSPTGYLRGAHMSNNADY*LHACAL Trigger: AAGAGCACAGGCATGAAGTCAATAATCAGCATTATT...AGACATATGGGCCCCTCTGAGGTACCCTGTGGGTGACAGGCCCAAGGCCTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | ATAAAACATAGAACATTTGGGGCTGGTGAGATGGCTCAATGGGTAAGAGCACCCCGCCTGTTTCCTGGTTaGAGCATGTGGCCGCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: IKHRTFGAGEMAQWVRAPRLFPG*SMWPLS Trigger: TGAGAGCGGCCACATGCTTCAACCAGGAAACAGGCG...GGGTGCTCTTACCCATTGAGCCATCTCACCAGCCCCAAATGTTCTATGTTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGTGCTTCTTCCAAATGTCCTCTGCCGTTTCCCAGACCCACCTTAGTTCGCCTGTGCATGGCAGCGTaGAAGGAAGAAAGCTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: SSASSKCPLPFPRPTLVRLCMAA*KEESFQ Trigger: TTGAAAGCTTTCTTCCTTCCACGCTGCCATGCACAG...GCGAACTAAGGTGGGTCTGGGAAACGGCAGAGGACATTTGGAAGAAGCACTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATATTGGCCAGGTATTACCGCTGCGCGAGAAAGATaGAACCAAGAGAAGGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: MEEVVIAREGNKYWPGITAARER*NQEKGL Trigger: CAGACCCTTCTCTTGGTTTCATCTTTCTCGCGCAGC...GGTAATACCTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGAAAGCCACCTCAGCCTAGTTTACCCTCAGCCTTGTTGTGGCTCTGAGGCCTGCAGGAAATTCCAATaGACCAGATTAAAAGAACAC | + |
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Preference number: 2 (lower is better) Translates to: GESHLSLVYPQPCCGSEACRKFQ*TRLKEH Trigger: GTGTTCTTTTAATCTGGTTCATTGGAATTTCCTGCA...GGCCTCAGAGCCACAACAAGGCTGAGGGTAAACTAGGCTGAGGTGGCTTTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | AGATTGGTGCACCAGACATTAGACAAAGACACAGAAATGGCAGAGCACTTCTGCGCTGCGCGAGAAAGATaGAACCAAGAGAAGGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: RLVHQTLDKDTEMAEHFCAARER*NQEKGL Trigger: CAGACCCTTCTCTTGGTTTCATCTTTCTCGCGCAGC...GCAGAAGTGCTCTGCCATTTCTGTGTCTTTGTCTAATGTCTGGTGCACCAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGAAAGCCACCTCAGCCTAGTTTACCCTCAGCCTTGTTGTGGCTCTGAGGCCCGAACATATATGAATTaGACACGTGAACAGATTGGT | + |
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Preference number: 2 (lower is better) Translates to: GESHLSLVYPQPCCGSEARTYMN*TREQIG Trigger: ACCAATCTGTTCACGTGTTCAATTCATATATGTTCG...GGCCTCAGAGCCACAACAAGGCTGAGGGTAAACTAGGCTGAGGTGGCTTTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAATATCGCTAGAGACCCAGCCTCTTGGCCTGCCTTATGCCATGTGTTGGAATTACTGCACTGTGCATaGCAGCGTGGAAGGAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: RNIARDPASWPALCHVLELLHCA*QRGRKK Trigger: TTTCTTCCTTCCACGCTGCCATGCACAGTGCAGTAA...TTCCAACACATGGCATAAGGCAGGCCAAGAGGCTGGGTCTCTAGCGATATTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAGTGCTTCTTCCAAATGTCCTCTGCCGTTTCCCAGACCCACCTTAGTTCGCACACAAAATATGGTCTaGAGAAGGATTACTGCACTG | + |
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Preference number: 2 (lower is better) Translates to: SSASSKCPLPFPRPTLVRTQNMV*RRITAL Trigger: CAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGT...GCGAACTAAGGTGGGTCTGGGAAACGGCAGAGGACATTTGGAAGAAGCACTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATATTGGCCAGGTATTACCAAAGCAGGGCACCCCTaGAATTTCTCTCTGTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: MEEVVIAREGNKYWPGITKAGHP*NFSLFL Trigger: CAGAAACAGAGAGAAATTTCAGGGGTGCCCTGCTTT...GGTAATACCTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAGTGCTTCTTCCAAATGTCCTCTGCCGTTTCCCAGACCCACCTTAGTTCGCGTGGAAGGCAATTACTaGGCCTTTGTTGCAAATAAT | + |
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Preference number: 2 (lower is better) Translates to: SSASSKCPLPFPRPTLVRVEGNY*AFVANN Trigger: ATTATTTGCAACAAAGGCTCAGTAATTGCCTTCCAC...GCGAACTAAGGTGGGTCTGGGAAACGGCAGAGGACATTTGGAAGAAGCACTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
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| 3UTR-3UTR GCA 90 bp | ACACACAAAATATGGTCTGAAGAAGGATTACTGCACTGTGCATGGCAGCGTGGACTGAAGAAGGATTACTaGACTGTGCATGGCAGCGTG | + |
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Preference number: 2 (lower is better) Translates to: THKIWSEEGLLHCAWQRGLKKDY*TVHGSV Trigger: CACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAG...TCCACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGTAAAGCCCAGAGAAAACAAAGCAGGGCACCCCTGAAATTTCTCTCTGTTCTGAAGAAGGATTACTaGACTGTGCATGGCAGCGTG | + |
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Preference number: 2 (lower is better) Translates to: CCKAQRKQSRAPLKFLSVLKKDY*TVHGSV Trigger: CACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAG...AACAGAGAGAAATTTCAGGGGTGCCCTGCTTTGTTTTCTCTGGGCTTTACAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGTAAAGCCCAGAGAAAACAAAGCAGGGCACCCCTGAAATTTCTCTCTGTTAAGAGGGAACGAGGCTaGGCGAGAAAGATGAAACCA | + |
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Preference number: 2 (lower is better) Translates to: CCKAQRKQSRAPLKFLSVKRERG*ARKMKP Trigger: TGGTTTCATCTTTCTCGCGCAGCCTCGTTCCCTCTT...AACAGAGAGAAATTTCAGGGGTGCCCTGCTTTGTTTTCTCTGGGCTTTACAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAATATCGCTAGAGACCCAGCCTCTTGGCCTGCCTTATGCCATGTGTTGGAAATGGCAGAGCACTTCTaGTGTAAAGCCCAGAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: RNIARDPASWPALCHVLEMAEHF*CKAQRK Trigger: TTTTCTCTGGGCTTTACAGCAGAAGTGCTCTGCCAT...TTCCAACACATGGCATAAGGCAGGCCAAGAGGCTGGGTCTCTAGCGATATTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAAACATAGAACATTTGGGGCTGGTGAGATGGCTCAATGGGTAAGAGCACCCTCCTGGACTTCAGCATaGAAGACACCTGCTGACAGT | + |
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Preference number: 2 (lower is better) Translates to: IKHRTFGAGEMAQWVRAPSWTSA*KTPADS Trigger: ACTGTCAGCAGGTGTCTTCCATGCTGAAGTCCAGGA...GGGTGCTCTTACCCATTGAGCCATCTCACCAGCCCCAAATGTTCTATGTTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
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| 3UTR-3UTR TCA 90 bp | AGATTGGTGCACCAGACATTAGACAAAGACACAGAAATGGCAGAGCACTTCTGCAATCTCAGGCCTCTGTaGTGGCCATCAACAATATGC | + |
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Preference number: 2 (lower is better) Translates to: RLVHQTLDKDTEMAEHFCNLRPL*WPSTIC Trigger: GCATATTGTTGATGGCCATCACAGAGGCCTGAGATT...GCAGAAGTGCTCTGCCATTTCTGTGTCTTTGTCTAATGTCTGGTGCACCAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGTAAAGCCCAGAGAAAACAAAGCAGGGCACCCCTGAAATTTCTCTCTGTTATTCCCAGAACTTTCTaGCCAGAGGTAGCACTCTCA | + |
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Preference number: 2 (lower is better) Translates to: CCKAQRKQSRAPLKFLSVIPRTF*PEVALS Trigger: TGAGAGTGCTACCTCTGGGCAGAAAGTTCTGGGAAT...AACAGAGAGAAATTTCAGGGGTGCCCTGCTTTGTTTTCTCTGGGCTTTACAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAATATCGCTAGAGACCCAGCCTCTTGGCCTGCCTTATGCCATGTGTTGGAATTAGGAGTGTATGGATaGGCTACAAGTGGTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: RNIARDPASWPALCHVLELGVYG*ATSGVL Trigger: AAGAACACCACTTGTAGCCCATCCATACACTCCTAA...TTCCAACACATGGCATAAGGCAGGCCAAGAGGCTGGGTCTCTAGCGATATTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAAATATCGCTAGAGACCCAGCCTCTTGGCCTGCCTTATGCCATGTGTTGGAAACAAAGACACAGAAATaGCAGAGCACTTCTGCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: RNIARDPASWPALCHVLETKTQK*QSTSAV Trigger: TACAGCAGAAGTGCTCTGCCATTTCTGTGTCTTTGT...TTCCAACACATGGCATAAGGCAGGCCAAGAGGCTGGGTCTCTAGCGATATTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGTGCTTCTTCCAAATGTCCTCTGCCGTTTCCCAGACCCACCTTAGTTCGCATATCTCTGTTTCATTaGAAACTGCATTTTCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SSASSKCPLPFPRPTLVRISLFH*KLHFLG Trigger: GCCCAGAAAATGCAGTTTCCAATGAAACAGAGATAT...GCGAACTAAGGTGGGTCTGGGAAACGGCAGAGGACATTTGGAAGAAGCACTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR CAA 90 bp | AGTGAATGTTCCTTTGGGTACTGTCATTTGCTGAGATTCTACTTGTaGAAGAACGAGTTCATGGTAGGTGTGGGCCACAGCATACACAGC | + |
|
Preference number: 2 (lower is better) Translates to: SECSFGYCHLLRFYL*KNEFMVGVGHSIHS Trigger: GCTGTGTATGCTGTGGCCCACACCTACCATGAACTCGTTCTTCAACAAGTAGAATCTCAGCAAATGACAGTACCCAAAGGAACATTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR CAA 90 bp | GTCAGTGAATGTTCCTTTGGGTACTGTCATTTGCTGAGATTCTACTaGTTGAAGAACGAGTTCATGGTAGGTGTGGGCCACAGCATACAC | + |
|
Preference number: 2 (lower is better) Translates to: VSECSFGYCHLLRFY*LKNEFMVGVGHSIH Trigger: GTGTATGCTGTGGCCCACACCTACCATGAACTCGTTCTTCAACAAGTAGAATCTCAGCAAATGACAGTACCCAAAGGAACATTCACTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR-3UTR GCA 90 bp | TGCTGTAAAGCCCAGAGAAAACAAAGCAGGGCACCCCTGAAATTTCTCTCTGTTATGGCAGAGCACTTCTaGTGTAAAGCCCAGAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: CCKAQRKQSRAPLKFLSVMAEHF*CKAQRK Trigger: TTTTCTCTGGGCTTTACAGCAGAAGTGCTCTGCCAT...AACAGAGAGAAATTTCAGGGGTGCCCTGCTTTGTTTTCTCTGGGCTTTACAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR CAA 90 bp | AGACACCTGCTGACAGTCAGTGAATGTTCCTTTGGGTACTGTCATTaGCTGAGATTCTACTTGTTGAAGAACGAGTTCATGGTAGGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: RHLLTVSECSFGYCH*LRFYLLKNEFMVGV Trigger: CACACCTACCATGAACTCGTTCTTCAACAAGTAGAATCTCAGCAAATGACAGTACCCAAAGGAACATTCACTGACTGTCAGCAGGTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAAATATCGCTAGAGACCCAGCCTCTTGGCCTGCCTTATGCCATGTGTTGGAAACCAAGAGAAGGGTCTaGTCAAAGTTCAATTTTACT | + |
|
Preference number: 2 (lower is better) Translates to: RNIARDPASWPALCHVLETKRRV*SKFNFT Trigger: AGTAAAATTGAACTTTGATCAGACCCTTCTCTTGGT...TTCCAACACATGGCATAAGGCAGGCCAAGAGGCTGGGTCTCTAGCGATATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | TTATTATCCAACATAAAACATAGAACATTTGGGGCTGGTGAGATGGCTCAATGGGCTGCGCGAGAAAGATaGAACCAAGAGAAGGGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LLSNIKHRTFGAGEMAQWAARER*NQEKGL Trigger: CAGACCCTTCTCTTGGTTTCATCTTTCTCGCGCAGC...CCATTGAGCCATCTCACCAGCCCCAAATGTTCTATGTTTTATGTTGGATAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCCAAGGCTCAGAGAAACGTAAAGAAGATGGTGGAAAAGATCTTGTGAGTCAACCTGCTGACAGTCAGTaGATGTTCCTTTGGGTACTG | + |
|
Preference number: 2 (lower is better) Translates to: IQGSEKRKEDGGKDLVSQPADSQ*MFLWVL Trigger: CAGTACCCAAAGGAACATTCACTGACTGTCAGCAGG...TTGACTCACAAGATCTTTTCCACCATCTTCTTTACGTTTCTCTGAGCCTTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR-3UTR CCA 90 bp | ATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATATTGGCCAGGTATTACCTATTTTCTTCTTTCATaGAGCTCCAAACCAGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: MEEVVIAREGNKYWPGITYFLLS*SSKPAV Trigger: CACTGCTGGTTTGGAGCTCCATGAAAGAAGAAAATA...GGTAATACCTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCTTTGAAGTCCTCTTTCTTATAATTCCCAGAACTTTCTGCCCAGAGGTAGCAACAAACGTGTGTCCTTaGTGGCTACCTGATGGACAT | + |
|
Preference number: 2 (lower is better) Translates to: LFEVLFLIIPRTFCPEVATNVCP*WLPDGH Trigger: ATGTCCATCAGGTAGCCACCAAGGACACACGTTTGT...TGCTACCTCTGGGCAGAAAGTTCTGGGAATTATAAGAAAGAGGACTTCAAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR-3UTR CCA 90 bp | ATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATATTGGCCAGGTATTACCAAAGTGACAGTCCCTTaGAAGAAATCAAGGCTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: MEEVVIAREGNKYWPGITKVTVP*KKSRLK Trigger: TTTCAGCCTTGATTTCTTCCAAGGGACTGTCACTTT...GGTAATACCTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR-3UTR TCA 90 bp | ACACACAAAATATGGTCTGAAGAAGGATTACTGCACTGTGCATGGCAGCGTGGACATGCCTGTGCTCTTTaGAGTCCTCTTTCTTATAAT | + |
|
Preference number: 2 (lower is better) Translates to: THKIWSEEGLLHCAWQRGHACAL*SPLSYN Trigger: ATTATAAGAAAGAGGACTTCAAAGAGCACAGGCATG...TCCACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATATTGGCCAGGTATTACCTCACAGTTAATAGAATaGAGTCAAGACAAGAACGTG | + |
|
Preference number: 2 (lower is better) Translates to: MEEVVIAREGNKYWPGITSQLIE*SQDKNV Trigger: CACGTTCTTGTCTTGACTTCATTCTATTAACTGTGA...GGTAATACCTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGACCTTCAGCAACTGACGTCCAGAAATAATAATGTTCATGTGTTTGTATGTCCAGACACTGGTTTATaGAGAAGGGGAAGGCACCCA | + |
|
Preference number: 2 (lower is better) Translates to: TDLQQLTSRNNNVHVFVCPDTGL*RRGRHP Trigger: TGGGTGCCTTCCCCTTCTTCATAAACCAGTGTCTGG...ACATACAAACACATGAACATTATTATTTCTGGACGTCAGTTGCTGAAGGTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATATTGGCCAGGTATTACCGAACACGAACATATATaGATTGAACACGTGAACAGA | + |
|
Preference number: 2 (lower is better) Translates to: MEEVVIAREGNKYWPGITEHEHI*IEHVNR Trigger: TCTGTTCACGTGTTCAATTCATATATGTTCGTGTTC...GGTAATACCTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTGCGCGAGAAAGATGAAACCAAGAGAAGGGTCTGATCAAAGTTCAATTTTACATGGTGTGCAAAAGTaGCAGTCCCTTGGAAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: GCARKMKPREGSDQSSILHGVQK*QSLGRN Trigger: ATTTCTTCCAAGGGACTGTCACTTTTGCACACCATG...TAAAATTGAACTTTGATCAGACCCTTCTCTTGGTTTCATCTTTCTCGCGCAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
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| 3UTR-3UTR GCA 90 bp | TCTTGTGAGTCAAAGGATGAGGAAACTGGCTGTGAACACAAATCTTCTAGAACTATTCCCAGAACTTTCTaGCCAGAGGTAGCACTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: SCESKDEETGCEHKSSRTIPRTF*PEVALS Trigger: TGAGAGTGCTACCTCTGGGCAGAAAGTTCTGGGAAT...AGTTCTAGAAGATTTGTGTTCACAGCCAGTTTCCTCATCCTTTGACTCACAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGTAAAGCCCAGAGAAAACAAAGCAGGGCACCCCTGAAATTTCTCTCTGTTTGTCTTAGAGTCTGTTaGTGTAAGAAAACACCATGG | + |
|
Preference number: 2 (lower is better) Translates to: CCKAQRKQSRAPLKFLSVCLRVC*CKKTPW Trigger: CCATGGTGTTTTCTTACAGCAACAGACTCTAAGACA...AACAGAGAGAAATTTCAGGGGTGCCCTGCTTTGTTTTCTCTGGGCTTTACAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR CCA 90 bp | AACAATACTTTGAGAGAAAATGACACTGACCTTCAGCAACTGACGTCCAGAAATCTGATGATCCTCCTGTaGCCCACTCCAAATCTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: NNTLRENDTDLQQLTSRNLMILL*PTPNLQ Trigger: CTGAAGATTTGGAGTGGGCCACAGGAGGATCATCAG...ATTTCTGGACGTCAGTTGCTGAAGGTCAGTGTCATTTTCTCTCAAAGTATTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
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| 3UTR-3UTR TCA 90 bp | ACACACAAAATATGGTCTGAAGAAGGATTACTGCACTGTGCATGGCAGCGTGGACAACAAACAATACTTTaGGAGAAAATGACACTGACC | + |
|
Preference number: 2 (lower is better) Translates to: THKIWSEEGLLHCAWQRGQQTIL*EKMTLT Trigger: GGTCAGTGTCATTTTCTCTCAAAGTATTGTTTGTTG...TCCACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | ATAAAACATAGAACATTTGGGGCTGGTGAGATGGCTCAATGGGTAAGAGCACCCTGCAGGAAATTCCAATaGACCAGATTAAAAGAACAC | + |
|
Preference number: 2 (lower is better) Translates to: IKHRTFGAGEMAQWVRAPCRKFQ*TRLKEH Trigger: GTGTTCTTTTAATCTGGTTCATTGGAATTTCCTGCA...GGGTGCTCTTACCCATTGAGCCATCTCACCAGCCCCAAATGTTCTATGTTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | ATAAAACATAGAACATTTGGGGCTGGTGAGATGGCTCAATGGGTAAGAGCACCCCGAACATATATGAATTaGACACGTGAACAGATTGGT | + |
|
Preference number: 2 (lower is better) Translates to: IKHRTFGAGEMAQWVRAPRTYMN*TREQIG Trigger: ACCAATCTGTTCACGTGTTCAATTCATATATGTTCG...GGGTGCTCTTACCCATTGAGCCATCTCACCAGCCCCAAATGTTCTATGTTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | CAGATTGCATATCTCTGTTTCATTGGAAACTGCATTTTCTGGGCACTGATCACAGGTCATCATCTGAGATaGCCATTCCTATCCAAATCC | + |
|
Preference number: 2 (lower is better) Translates to: QIAYLCFIGNCIFWALITGHHLR*PFLSKS Trigger: GGATTTGGATAGGAATGGTCATCTCAGATGATGACC...TGTGATCAGTGCCCAGAAAATGCAGTTTCCAATGAAACAGAGATATGCAATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
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| 3UTR-3UTR GCA 90 bp | AGATTGGTGCACCAGACATTAGACAAAGACACAGAAATGGCAGAGCACTTCTGCTGGCCATCAACAATATaGAACACTGTAACTATGCTT | + |
|
Preference number: 2 (lower is better) Translates to: RLVHQTLDKDTEMAEHFCWPSTI*NTVTML Trigger: AAGCATAGTTACAGTGTTGCATATTGTTGATGGCCA...GCAGAAGTGCTCTGCCATTTCTGTGTCTTTGTCTAATGTCTGGTGCACCAATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR GCA 90 bp | ACACACAAAATATGGTCTGAAGAAGGATTACTGCACTGTGCATGGCAGCGTGGATGGCCATCAACAATATaGAACACTGTAACTATGCTT | + |
|
Preference number: 2 (lower is better) Translates to: THKIWSEEGLLHCAWQRGWPSTI*NTVTML Trigger: AAGCATAGTTACAGTGTTGCATATTGTTGATGGCCA...TCCACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR GCA 90 bp | AGATTGGTGCACCAGACATTAGACAAAGACACAGAAATGGCAGAGCACTTCTGCACCATGTCATATTTGTaGAGTGTTGTCCATTCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: RLVHQTLDKDTEMAEHFCTMSYL*SVVHSN Trigger: ATTGGAATGGACAACACTGCACAAATATGACATGGT...GCAGAAGTGCTCTGCCATTTCTGTGTCTTTGTCTAATGTCTGGTGCACCAATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
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| 3UTR-3UTR CCA 90 bp | AACTTTAAATCAGGGAATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATATTAGGAGTGTATGGATaGGCTACAAGTGGTGTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: NFKSGNGGGCHSQGREQILGVYG*ATSGVL Trigger: AAGAACACCACTTGTAGCCCATCCATACACTCCTAA...TATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCATTCCCTGATTTAAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTTGGAAGGACTCTAAACCTGAGTTATCAATTTTAAGGCTAACCATCTGTAGGCATCTTGGAATCTaGAAGGGAAGAGGGAACGAG | + |
|
Preference number: 2 (lower is better) Translates to: MCWKDSKPELSILRLTICRHLGI*KGRGNE Trigger: CTCGTTCCCTCTTCCCTTCCAGATTCCAAGATGCCT...ACAGATGGTTAGCCTTAAAATTGATAACTCAGGTTTAGAGTCCTTCCAACACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR CCA 90 bp | AACTTTAAATCAGGGAATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATAACAAAGACACAGAAATaGCAGAGCACTTCTGCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: NFKSGNGGGCHSQGREQITKTQK*QSTSAV Trigger: TACAGCAGAAGTGCTCTGCCATTTCTGTGTCTTTGT...TATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCATTCCCTGATTTAAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR CAA 90 bp | TCAGGGAATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATATaGGCCAGGTATTACCAAATAATGAGCCATCAAAACATAAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: SGNGGGCHSQGREQI*ARYYQIMSHQNIKT Trigger: TGTTTTTATGTTTTGATGGCTCATTATTTGGTAATACCTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCATTCCCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR CAA 90 bp | TGCATTTTCTGGGCACTGATCACAATCAAAGCAGCAGTCTGCTGTTaGTTTCTGATGAATTTTCCTGAATCCAGCAGTACATGTTACACT | + |
|
Preference number: 2 (lower is better) Translates to: CIFWALITIKAAVCC*FLMNFPESSSTCYT Trigger: AGTGTAACATGTACTGCTGGATTCAGGAAAATTCATCAGAAACAAACAGCAGACTGCTGCTTTGATTGTGATCAGTGCCCAGAAAATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
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| 3UTR-3UTR TCA 90 bp | GGCTGCGCGAGAAAGATGAAACCAAGAGAAGGGTCTGATCAAAGTTCAATTTTACATGCCTGTGCTCTTTaGAGTCCTCTTTCTTATAAT | + |
|
Preference number: 2 (lower is better) Translates to: GCARKMKPREGSDQSSILHACAL*SPLSYN Trigger: ATTATAAGAAAGAGGACTTCAAAGAGCACAGGCATG...TAAAATTGAACTTTGATCAGACCCTTCTCTTGGTTTCATCTTTCTCGCGCAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTGTTGGAAGGACTCTAAACCTGAGTTATCAATTTTAAGGCTAACCATCTGTAATCTCAGGCCTCTGTaGTGGCCATCAACAATATGC | + |
|
Preference number: 2 (lower is better) Translates to: MCWKDSKPELSILRLTICNLRPL*WPSTIC Trigger: GCATATTGTTGATGGCCATCACAGAGGCCTGAGATT...ACAGATGGTTAGCCTTAAAATTGATAACTCAGGTTTAGAGTCCTTCCAACACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGTGTTGGAAGGACTCTAAACCTGAGTTATCAATTTTAAGGCTAACCATCTGTATTCCCAGAACTTTCTaGCCAGAGGTAGCACTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: MCWKDSKPELSILRLTICIPRTF*PEVALS Trigger: TGAGAGTGCTACCTCTGGGCAGAAAGTTCTGGGAAT...ACAGATGGTTAGCCTTAAAATTGATAACTCAGGTTTAGAGTCCTTCCAACACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR GCA 90 bp | AACTTTAAATCAGGGAATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATATGTTTCATTGGAAACTaGATTTTCTGGGCACTGATC | + |
|
Preference number: 2 (lower is better) Translates to: NFKSGNGGGCHSQGREQICFIGN*IFWALI Trigger: GATCAGTGCCCAGAAAATGCAGTTTCCAATGAAACA...TATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCATTCCCTGATTTAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR-3UTR CCA 90 bp | GGCTGCGCGAGAAAGATGAAACCAAGAGAAGGGTCTGATCAAAGTTCAATTTTATGTAAGAAAACACCATaGTCAAAGGAACCATGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: GCARKMKPREGSDQSSILCKKTP*SKEPCE Trigger: CTCACATGGTTCCTTTGACCATGGTGTTTTCTTACA...TAAAATTGAACTTTGATCAGACCCTTCTCTTGGTTTCATCTTTCTCGCGCAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGTGTTGGAAGGACTCTAAACCTGAGTTATCAATTTTAAGGCTAACCATCTGTTTACTGCACTGTGCATaGCAGCGTGGAAGGAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: MCWKDSKPELSILRLTICLLHCA*QRGRKK Trigger: TTTCTTCCTTCCACGCTGCCATGCACAGTGCAGTAA...ACAGATGGTTAGCCTTAAAATTGATAACTCAGGTTTAGAGTCCTTCCAACACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTTAATTATTTTCTTCTTTCATGGAGCTCCAAACCAGCAGTGCTTCTTCCACCTCCAAATCATCCTTaGAGTCCAATTTCAGGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: SFNYFLLSWSSKPAVLLPPPNHP*SPISGD Trigger: GTCACCTGAAATTGGACTCCAAGGATGATTTGGAGG...TGGAAGAAGCACTGCTGGTTTGGAGCTCCATGAAAGAAGAAAATAATTAAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR TCA 90 bp | GATGAGGAAACTGGCTGTGAACACAAATCTTCTAGAACTAGCATAAGTAGACCACATGCCTGTGCTCTTTaGAGTCCTCTTTCTTATAAT | + |
|
Preference number: 2 (lower is better) Translates to: DEETGCEHKSSRTSISRPHACAL*SPLSYN Trigger: ATTATAAGAAAGAGGACTTCAAAGAGCACAGGCATG...TGGTCTACTTATGCTAGTTCTAGAAGATTTGTGTTCACAGCCAGTTTCCTCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR GCA 90 bp | AACAATACTTTGAGAGAAAATGACACTGACCTTCAGCAACTGACGTCCAGAAATTTGACTTCATGCCTGTaGTCTTTGAAGTCCTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: NNTLRENDTDLQQLTSRNLTSCL*SLKSSF Trigger: GAAAGAGGACTTCAAAGAGCACAGGCATGAAGTCAA...ATTTCTGGACGTCAGTTGCTGAAGGTCAGTGTCATTTTCTCTCAAAGTATTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTATCCTCTTACAAAATTTTCCCTCATCCAAGGCTCAGAGAAACGTAAAGAAGTTGACTTCATGCCTGTaGTCTTTGAAGTCCTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: CILLQNFPSSKAQRNVKKLTSCL*SLKSSF Trigger: GAAAGAGGACTTCAAAGAGCACAGGCATGAAGTCAA...CTTCTTTACGTTTCTCTGAGCCTTGGATGAGGGAAAATTTTGTAAGAGGATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTCCTCACTTAGGACCATGTCATATTTGTGCAGTGTTGTCCATTCCAATGTGTCAGATTCCATGTCTTTaGATTTCTTCTCTCATGTCT | + |
|
Preference number: 2 (lower is better) Translates to: LPHLGPCHICAVLSIPMCQIPCL*ISSLMS Trigger: AGACATGAGAGAAGAAATGCAAAGACATGGAATCTG...ACACATTGGAATGGACAACACTGCACAAATATGACATGGTCCTAAGTGAGGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR-3UTR CCA 90 bp | ATCCAAGGCTCAGAGAAACGTAAAGAAGATGGTGGAAAAGATCTTGTGAGTCAAGGAAACTGCATTTTCTaGGCACTGATCACAATCAAA | + |
|
Preference number: 2 (lower is better) Translates to: IQGSEKRKEDGGKDLVSQGNCIF*ALITIK Trigger: TTTGATTGTGATCAGTGCCCAGAAAATGCAGTTTCC...TTGACTCACAAGATCTTTTCCACCATCTTCTTTACGTTTCTCTGAGCCTTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR-3UTR TCA 90 bp | TCTTGTGAGTCAAAGGATGAGGAAACTGGCTGTGAACACAAATCTTCTAGAACTCAACAAACAATACTTTaGGAGAAAATGACACTGACC | + |
|
Preference number: 2 (lower is better) Translates to: SCESKDEETGCEHKSSRTQQTIL*EKMTLT Trigger: GGTCAGTGTCATTTTCTCTCAAAGTATTGTTTGTTG...AGTTCTAGAAGATTTGTGTTCACAGCCAGTTTCCTCATCCTTTGACTCACAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCCAAGGCTCAGAGAAACGTAAAGAAGATGGTGGAAAAGATCTTGTGAGTCAACAACAAACAATACTTTaGGAGAAAATGACACTGACC | + |
|
Preference number: 2 (lower is better) Translates to: IQGSEKRKEDGGKDLVSQQQTIL*EKMTLT Trigger: GGTCAGTGTCATTTTCTCTCAAAGTATTGTTTGTTG...TTGACTCACAAGATCTTTTCCACCATCTTCTTTACGTTTCTCTGAGCCTTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTTGTGAGTCAAAGGATGAGGAAACTGGCTGTGAACACAAATCTTCTAGAACTTCCAGAGTAGGTAGTTaGAGGAAACAATTCAATGTA | + |
|
Preference number: 2 (lower is better) Translates to: SCESKDEETGCEHKSSRTSRVGS*RKQFNV Trigger: TACATTGAATTGTTTCCTTCAACTACCTACTCTGGA...AGTTCTAGAAGATTTGTGTTCACAGCCAGTTTCCTCATCCTTTGACTCACAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCTTTAATTATTTTCTTCTTTCATGGAGCTCCAAACCAGCAGTGCTTCTTCCATGTCTTAGAGTCTGTTaGTGTAAGAAAACACCATGG | + |
|
Preference number: 2 (lower is better) Translates to: SFNYFLLSWSSKPAVLLPCLRVC*CKKTPW Trigger: CCATGGTGTTTTCTTACAGCAACAGACTCTAAGACA...TGGAAGAAGCACTGCTGGTTTGGAGCTCCATGAAAGAAGAAAATAATTAAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCCAAGGCTCAGAGAAACGTAAAGAAGATGGTGGAAAAGATCTTGTGAGTCAATGGCCATCAACAATATaGAACACTGTAACTATGCTT | + |
|
Preference number: 2 (lower is better) Translates to: IQGSEKRKEDGGKDLVSQWPSTI*NTVTML Trigger: AAGCATAGTTACAGTGTTGCATATTGTTGATGGCCA...TTGACTCACAAGATCTTTTCCACCATCTTCTTTACGTTTCTCTGAGCCTTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR GCA 90 bp | GCAACAAACAATACTTTGAGAGAAAATGACACTGACCTTCAGCAACTGACGTCCCTTGTCATATATAACTaGATGTCTTCTGGGATCATA | + |
|
Preference number: 2 (lower is better) Translates to: ATNNTLRENDTDLQQLTSLVIYN*MSSGII Trigger: TATGATCCCAGAAGACATGCAGTTATATATGACAAG...GGACGTCAGTTGCTGAAGGTCAGTGTCATTTTCTCTCAAAGTATTGTTTGTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR-3UTR CCA 90 bp | ACTGACCTTCAGCAACTGACGTCCAGAAATAATAATGTTCATGTGTTTGTATGTGCAATTTCACCTACATaGTGTGCAAAAGTGACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TDLQQLTSRNNNVHVFVCAISPT*CAKVTV Trigger: GACTGTCACTTTTGCACACCATGTAGGTGAAATTGC...ACATACAAACACATGAACATTATTATTTCTGGACGTCAGTTGCTGAAGGTCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR-3UTR TCA 90 bp | TTATTATCCAACATAAAACATAGAACATTTGGGGCTGGTGAGATGGCTCAATGGAATAATGCTGATTATTaGCTTCATGCCTGTGCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LLSNIKHRTFGAGEMAQWNNADY*LHACAL Trigger: AAGAGCACAGGCATGAAGTCAATAATCAGCATTATT...CCATTGAGCCATCTCACCAGCCCCAAATGTTCTATGTTTTATGTTGGATAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTATCCTCTTACAAAATTTTCCCTCATCCAAGGCTCAGAGAAACGTAAAGAAGTCACAGTTAATAGAATaGAGTCAAGACAAGAACGTG | + |
|
Preference number: 2 (lower is better) Translates to: CILLQNFPSSKAQRNVKKSQLIE*SQDKNV Trigger: CACGTTCTTGTCTTGACTTCATTCTATTAACTGTGA...CTTCTTTACGTTTCTCTGAGCCTTGGATGAGGGAAAATTTTGTAAGAGGATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCATTCTTCTAGAGTGCCTTATATATTCCAAGATTTCACTGATCTCCTTGTGACACAAAATATGGTCTaGAGAAGGATTACTGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: SHSSRVPYIFQDFTDLLVTQNMV*RRITAL Trigger: CAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGT...CACAAGGAGATCAGTGAAATCTTGGAATATATAAGGCACTCTAGAAGAATGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTTAATTATTTTCTTCTTTCATGGAGCTCCAAACCAGCAGTGCTTCTTCCAACCAAGAGAAGGGTCTaGTCAAAGTTCAATTTTACT | + |
|
Preference number: 2 (lower is better) Translates to: SFNYFLLSWSSKPAVLLPTKRRV*SKFNFT Trigger: AGTAAAATTGAACTTTGATCAGACCCTTCTCTTGGT...TGGAAGAAGCACTGCTGGTTTGGAGCTCCATGAAAGAAGAAAATAATTAAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTCATTCTTCTAGAGTGCCTTATATATTCCAAGATTTCACTGATCTCCTTGTGTGTCTTAGAGTCTGTTaGTGTAAGAAAACACCATGG | + |
|
Preference number: 2 (lower is better) Translates to: SHSSRVPYIFQDFTDLLVCLRVC*CKKTPW Trigger: CCATGGTGTTTTCTTACAGCAACAGACTCTAAGACA...CACAAGGAGATCAGTGAAATCTTGGAATATATAAGGCACTCTAGAAGAATGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTGACCTTCAGCAACTGACGTCCAGAAATAATAATGTTCATGTGTTTGTATGTTGTAAGAAAACACCATaGTCAAAGGAACCATGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: TDLQQLTSRNNNVHVFVCCKKTP*SKEPCE Trigger: CTCACATGGTTCCTTTGACCATGGTGTTTTCTTACA...ACATACAAACACATGAACATTATTATTTCTGGACGTCAGTTGCTGAAGGTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGTGTTGGAAGGACTCTAAACCTGAGTTATCAATTTTAAGGCTAACCATCTGTTCACAGTTAATAGAATaGAGTCAAGACAAGAACGTG | + |
|
Preference number: 2 (lower is better) Translates to: MCWKDSKPELSILRLTICSQLIE*SQDKNV Trigger: CACGTTCTTGTCTTGACTTCATTCTATTAACTGTGA...ACAGATGGTTAGCCTTAAAATTGATAACTCAGGTTTAGAGTCCTTCCAACACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGTGTTGGAAGGACTCTAAACCTGAGTTATCAATTTTAAGGCTAACCATCTGTTGCAGGAAATTCCAATaGACCAGATTAAAAGAACAC | + |
|
Preference number: 2 (lower is better) Translates to: MCWKDSKPELSILRLTICCRKFQ*TRLKEH Trigger: GTGTTCTTTTAATCTGGTTCATTGGAATTTCCTGCA...ACAGATGGTTAGCCTTAAAATTGATAACTCAGGTTTAGAGTCCTTCCAACACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGTGTTGGAAGGACTCTAAACCTGAGTTATCAATTTTAAGGCTAACCATCTGTACCAAGAGAAGGGTCTaGTCAAAGTTCAATTTTACT | + |
|
Preference number: 2 (lower is better) Translates to: MCWKDSKPELSILRLTICTKRRV*SKFNFT Trigger: AGTAAAATTGAACTTTGATCAGACCCTTCTCTTGGT...ACAGATGGTTAGCCTTAAAATTGATAACTCAGGTTTAGAGTCCTTCCAACACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTATCCTCTTACAAAATTTTCCCTCATCCAAGGCTCAGAGAAACGTAAAGAAGATGACACACAAAATATaGTCTGAAGAAGGATTACTG | + |
|
Preference number: 2 (lower is better) Translates to: CILLQNFPSSKAQRNVKKMTHKI*SEEGLL Trigger: CAGTAATCCTTCTTCAGACCATATTTTGTGTGTCAT...CTTCTTTACGTTTCTCTGAGCCTTGGATGAGGGAAAATTTTGTAAGAGGATACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGTGTTGGAAGGACTCTAAACCTGAGTTATCAATTTTAAGGCTAACCATCTGTTTTCCATGTTCAGATTaGATATCTCTGTTTCATTGG | + |
|
Preference number: 2 (lower is better) Translates to: MCWKDSKPELSILRLTICFPCSD*ISLFHW Trigger: CCAATGAAACAGAGATATGCAATCTGAACATGGAAA...ACAGATGGTTAGCCTTAAAATTGATAACTCAGGTTTAGAGTCCTTCCAACACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR TCA 72 bp | CCTCAGCCTAGTTTACCCTCAGCCTTGTTGTGGCTCTaGGGCCTTGGGCCTGTCACCCACAGGGTACCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PQPSLPSALLWL*GLGPVTHRVPQ Trigger: CTGAGGTACCCTGTGGGTGACAGGCCCAAGGCCTCAGAGCCACAACAAGGCTGAGGGTAAACTAGGCTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR GCA 72 bp | GCTGCTGAGCCCCGCATCTCTGAAACAGAGGCGGTGTaGATGATGTTAAGCGGCATCTCCGTAGTCTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: AAEPRISETEAV*MMLSGISVVLC Trigger: ACACAAGACTACGGAGATGCCGCTTAACATCATGCACACCGCCTCTGTTTCAGAGATGCGGGGCTCAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR TCA 72 bp | ATTCCCTCCAAATCATCCTTGGAGTCCAATTTCAGGTaGCCACGTGATAGCTCCGGAACAGCTGGGCGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: IPSKSSLESNFR*PRDSSGTAGRQ Trigger: CTGCCGCCCAGCTGTTCCGGAGCTATCACGTGGTCACCTGAAATTGGACTCCAAGGATGATTTGGAGGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR CCA 72 bp | GTTCGCCAAATCTGCCCACCTGTCTGGGTTCTAGTCTaGGAGGCATCTTGGAATCTGGAAGGGAAGAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VRQICPPVWVLV*EASWNLEGKRE Trigger: TTCCCTCTTCCCTTCCAGATTCCAAGATGCCTCCCAGACTAGAACCCAGACAGGTGGGCAGATTTGGCGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGAGGCCTTGGGCCTGTCACCCACAGGGTACCTCAGAGGGGCCCATATGTCTAAAAGTGACAGTCCCTaGGAAGAAATCAAGGCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SEALGLSPTGYLRGAHMSKSDSP*EEIKAE Trigger: TTCAGCCTTGATTTCTTCCAAGGGACTGTCACTTTT...AGACATATGGGCCCCTCTGAGGTACCCTGTGGGTGACAGGCCCAAGGCCTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR CCA 72 bp | AGACCCACCTTAGTTCGCCAAATCTGCCCACCTGTCTaGGTTCTAGTCTGGGAGGCATCTTGGAATCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RPTLVRQICPPV*VLVWEASWNLE Trigger: TTCCAGATTCCAAGATGCCTCCCAGACTAGAACCCAGACAGGTGGGCAGATTTGGCGAACTAAGGTGGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR GCA 72 bp | GCATCTTGGAATCTGGAAGGGAAGAGGGAACGAGGCTaGGCGAGAAAGATGAAACCAAGAGAAGGGTCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: ASWNLEGKRERG*ARKMKPREGSD Trigger: ATCAGACCCTTCTCTTGGTTTCATCTTTCTCGCGCAGCCTCGTTCCCTCTTCCCTTCCAGATTCCAAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGAAAGCCACCTCAGCCTAGTTTACCCTCAGCCTTGTTGTGGCTCTGAGGCCGGAAGGGAACAAATATaGGCCAGGTATTACCAAATA | + |
|
Preference number: 3 (lower is better) Translates to: GESHLSLVYPQPCCGSEAGREQI*ARYYQI Trigger: TATTTGGTAATACCTGGCCAATATTTGTTCCCTTCC...GGCCTCAGAGCCACAACAAGGCTGAGGGTAAACTAGGCTGAGGTGGCTTTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATATTGGCCAGGTATTACCAGTCTGGGAGGCATCTaGGAATCTGGAAGGGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: MEEVVIAREGNKYWPGITSLGGI*ESGREE Trigger: CTCTTCCCTTCCAGATTCCAAGATGCCTCCCAGACT...GGTAATACCTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGTGCTTCTTCCAAATGTCCTCTGCCGTTTCCCAGACCCACCTTAGTTCGCAAGAATTTGGCTTCATaGAATCTGTCAGGAAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SSASSKCPLPFPRPTLVRKNLAS*NLSGRF Trigger: GAACCTTCCTGACAGATTCAATGAAGCCAAATTCTT...GCGAACTAAGGTGGGTCTGGGAAACGGCAGAGGACATTTGGAAGAAGCACTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTTTAAATCAGGGAATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATAAGTCTGGGAGGCATCTaGGAATCTGGAAGGGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: NFKSGNGGGCHSQGREQISLGGI*ESGREE Trigger: CTCTTCCCTTCCAGATTCCAAGATGCCTCCCAGACT...TATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCATTCCCTGATTTAAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR TCA 72 bp | TGGAAGGGAAGAGGGAACGAGGCTGCGCGAGAAAGATaGAACCAAGAGAAGGGTCTGATCAAAGTTCAATTT | + |
|
Preference number: 3 (lower is better) Translates to: WKGRGNEAARER*NQEKGLIKVQF Trigger: AAATTGAACTTTGATCAGACCCTTCTCTTGGTTTCATCTTTCTCGCGCAGCCTCGTTCCCTCTTCCCTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR GCA 72 bp | ACATTAGACAAAGACACAGAAATGGCAGAGCACTTCTaGTGTAAAGCCCAGAGAAAACAAAGCAGGGCACCC | + |
|
Preference number: 3 (lower is better) Translates to: TLDKDTEMAEHF*CKAQRKQSRAP Trigger: GGGTGCCCTGCTTTGTTTTCTCTGGGCTTTACAGCAGAAGTGCTCTGCCATTTCTGTGTCTTTGTCTAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR CCA 72 bp | GAGACCCAGCCTCTTGGCCTGCCTTATGCCATGTGTTaGAAGGACTCTAAACCTGAGTTATCAATTTTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ETQPLGLPYAMC*KDSKPELSILR Trigger: CCTTAAAATTGATAACTCAGGTTTAGAGTCCTTCCAACACATGGCATAAGGCAGGCCAAGAGGCTGGGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR CCA 72 bp | CCCAGAGCCAAGGCACCCAAGTATCCGAGAACAAAGTaGAAGGCAATTACTGAGCCTTTGTTGCAAATAATG | + |
|
Preference number: 3 (lower is better) Translates to: PRAKAPKYPRTK*KAITEPLLQIM Trigger: CATTATTTGCAACAAAGGCTCAGTAATTGCCTTCCACTTTGTTCTCGGATACTTGGGTGCCTTGGCTCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATATTGGCCAGGTATTACCGCAGCAGTCTGCTGTTaGTTTCTGATGAATTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: MEEVVIAREGNKYWPGITAAVCC*FLMNFP Trigger: AGGAAAATTCATCAGAAACAAACAGCAGACTGCTGC...GGTAATACCTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR TCA 72 bp | TGGACTTCAGCATGGAAGACACCTGCTGACAGTCAGTaGATGTTCCTTTGGGTACTGTCATTTGCTGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: WTSAWKTPADSQ*MFLWVLSFAEI Trigger: AATCTCAGCAAATGACAGTACCCAAAGGAACATTCACTGACTGTCAGCAGGTGTCTTCCATGCTGAAGTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR GCA 72 bp | ATTATTTTCTTCTTTCATGGAGCTCCAAACCAGCAGTaGTTCTTCCAAATGTCCTCTGCCGTTTCCCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: IIFFFHGAPNQQ*FFQMSSAVSQT Trigger: GGTCTGGGAAACGGCAGAGGACATTTGGAAGAAGCACTGCTGGTTTGGAGCTCCATGAAAGAAGAAAATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR TCA 72 bp | AGGCTGCGCGAGAAAGATGAAACCAAGAGAAGGGTCTaGTCAAAGTTCAATTTTACTATTCCCAGACACTGG | + |
|
Preference number: 3 (lower is better) Translates to: RLREKDETKRRV*SKFNFTIPRHW Trigger: CCAGTGTCTGGGAATAGTAAAATTGAACTTTGATCAGACCCTTCTCTTGGTTTCATCTTTCTCGCGCAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR TCA 72 bp | GTAAATATCCTGGACTTCAGCATGGAAGACACCTGCTaGCAGTCAGTGAATGTTCCTTTGGGTACTGTCATT | + |
|
Preference number: 3 (lower is better) Translates to: VNILDFSMEDTC*QSVNVPLGTVI Trigger: AATGACAGTACCCAAAGGAACATTCACTGACTGTCAGCAGGTGTCTTCCATGCTGAAGTCCAGGATATTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR-3UTR CAA 90 bp | ATAAAACATAGAACATTTGGGGCTGGTGAGATGGCTCAATGGGTAAGAGCACCCCTAGAGGTCAAAGTGTaGATAGCCATTCATCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: IKHRTFGAGEMAQWVRAPLEVKV*IAIHQV Trigger: AACTTGATGAATGGCTATCAACACTTTGACCTCTAG...GGGTGCTCTTACCCATTGAGCCATCTCACCAGCCCCAAATGTTCTATGTTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAAAACATAGAACATTTGGGGCTGGTGAGATGGCTCAATGGGTAAGAGCACCCGGAAGGGAACAAATATaGGCCAGGTATTACCAAATA | + |
|
Preference number: 3 (lower is better) Translates to: IKHRTFGAGEMAQWVRAPGREQI*ARYYQI Trigger: TATTTGGTAATACCTGGCCAATATTTGTTCCCTTCC...GGGTGCTCTTACCCATTGAGCCATCTCACCAGCCCCAAATGTTCTATGTTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGTGAGTCAAAGGATGAGGAAACTGGCTGTGAACACAAATCTTCTAGAACTACATCAAGGAGACCATaGCATGGGACAAACGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SCESKDEETGCEHKSSRTTSRRP*HGTNVC Trigger: ACACACGTTTGTCCCATGCAATGGTCTCCTTGATGT...AGTTCTAGAAGATTTGTGTTCACAGCCAGTTTCCTCATCCTTTGACTCACAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR-3UTR CAA 90 bp | CACACAAAATATGGTCTGAAGAAGGATTACTGCACTGTGCATGGCAGCGTGGAACATATCTCTGTTTCATaGGAAACTGCATTTTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HTKYGLKKDYCTVHGSVEHISVS*ETAFSG Trigger: CCCAGAAAATGCAGTTTCCAATGAAACAGAGATATG...TTCCACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR-3UTR CAA 90 bp | ACACACAAAATATGGTCTGAAGAAGGATTACTGCACTGTGCATGGCAGCGTGGAAAGAATTTGGCTTCATaGAATCTGTCAGGAAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: THKIWSEEGLLHCAWQRGKNLAS*NLSGRF Trigger: GAACCTTCCTGACAGATTCAATGAAGCCAAATTCTT...TCCACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCACCAGTTCTCCAACAGGGTTAGTAAATATCCTGGACTTCAGCATGGAAGACACAGATTCCATGTCTTaGCATTTCTTCTCTCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: FTSSPTGLVNILDFSMEDTDSMS*HFFSHV Trigger: GACATGAGAGAAGAAATGCAAAGACATGGAATCTGT...GTCTTCCATGCTGAAGTCCAGGATATTTACTAACCCTGTTGGAGAACTGGTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR-3UTR CAA 90 bp | AGATTGGTGCACCAGACATTAGACAAAGACACAGAAATGGCAGAGCACTTCTGCCTTTCCATGTTCAGATaGCATATCTCTGTTTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: RLVHQTLDKDTEMAEHFCLSMFR*HISVSL Trigger: CAATGAAACAGAGATATGCAATCTGAACATGGAAAG...GCAGAAGTGCTCTGCCATTTCTGTGTCTTTGTCTAATGTCTGGTGCACCAATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR TCA 72 bp | ATGAAGTTTTACCAATATGACACACAAAATATGGTCTaGAGAAGGATTACTGCACTGTGCATGGCAGCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: MKFYQYDTQNMV*RRITALCMAAW Trigger: CCACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGTGTCATATTGGTAAAACTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR TCA 72 bp | CAAAGTTCAATTTTACTATTCCCAGACACTGGTTTATaGAGAAGGGGAAGGCACCCATTCCCTCCAAATCAT | + |
|
Preference number: 3 (lower is better) Translates to: QSSILLFPDTGL*RRGRHPFPPNH Trigger: ATGATTTGGAGGGAATGGGTGCCTTCCCCTTCTTCATAAACCAGTGTCTGGGAATAGTAAAATTGAACTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR GCA 72 bp | TTTGAAGTCCTCTTTCTTATAATTCCCAGAACTTTCTaGCCAGAGGTAGCACTCTCACATATGTTACGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: FEVLFLIIPRTF*PEVALSHMLRS Trigger: TGAGCGTAACATATGTGAGAGTGCTACCTCTGGGCAGAAAGTTCTGGGAATTATAAGAAAGAGGACTTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR GCA 72 bp | ATTTTCTGGGCACTGATCACAATCAAAGCAGCAGTCTaGTGTTTGTTTCTGATGAATTTTCCTGAATCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: IFWALITIKAAV*CLFLMNFPESS Trigger: GCTGGATTCAGGAAAATTCATCAGAAACAAACAGCAGACTGCTGCTTTGATTGTGATCAGTGCCCAGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR-3UTR CAA 90 bp | AACTTTAAATCAGGGAATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATAGGAAGGGAACAAATATaGGCCAGGTATTACCAAATA | + |
|
Preference number: 3 (lower is better) Translates to: NFKSGNGGGCHSQGREQIGREQI*ARYYQI Trigger: TATTTGGTAATACCTGGCCAATATTTGTTCCCTTCC...TATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCATTCCCTGATTTAAAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAACAAACAATACTTTGAGAGAAAATGACACTGACCTTCAGCAACTGACGTCCCATATTTGTGCAGTGTaGTCCATTCCAATGTGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ATNNTLRENDTDLQQLTSHICAV*SIPMCC Trigger: ACAACACATTGGAATGGACAACACTGCACAAATATG...GGACGTCAGTTGCTGAAGGTCAGTGTCATTTTCTCTCAAAGTATTGTTTGTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR TCA 72 bp | GAGCATTCATTCATACAGACTGAACACGAACATATATaGATTGAACACGTGAACAGATTGGTGCACCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: EHSFIQTEHEHI*IEHVNRLVHQT Trigger: TGTCTGGTGCACCAATCTGTTCACGTGTTCAATTCATATATGTTCGTGTTCAGTCTGTATGAATGAATGCTC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR GCA 72 bp | CATGTTCAGATTGCATATCTCTGTTTCATTGGAAACTaGATTTTCTGGGCACTGATCACAATCAAAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: HVQIAYLCFIGN*IFWALITIKAA Trigger: TGCTGCTTTGATTGTGATCAGTGCCCAGAAAATGCAGTTTCCAATGAAACAGAGATATGCAATCTGAACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR TCA 72 bp | GTACATTATGAAGCAATTACAAATCTCAGGCCTCTGTaGTGGCCATCAACAATATGCAACACTGTAACTATG | + |
|
Preference number: 3 (lower is better) Translates to: VHYEAITNLRPL*WPSTICNTVTM Trigger: CATAGTTACAGTGTTGCATATTGTTGATGGCCATCACAGAGGCCTGAGATTTGTAATTGCTTCATAATGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR TCA 72 bp | TGTCTTTGCATTTCTTCTCTCATGTCTGATAGAAACTaGATACTCTGGTCATCATCTGAGATGACCATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CLCISSLMSDRN*ILWSSSEMTIP Trigger: AGGAATGGTCATCTCAGATGATGACCAGAGTATTCAGTTTCTATCAGACATGAGAGAAGAAATGCAAAGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR CCA 72 bp | TGCAAGAAATTCCTAAAGTTAGCAATTTCACCTACATaGTGTGCAAAAGTGACAGTCCCTTGGAAGAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: CKKFLKLAISPT*CAKVTVPWKKS Trigger: TGATTTCTTCCAAGGGACTGTCACTTTTGCACACCATGTAGGTGAAATTGCTAACTTTAGGAATTTCTTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGTTGGAAGGACTCTAAACCTGAGTTATCAATTTTAAGGCTAACCATCTGTCTAGAGGTCAAAGTGTaGATAGCCATTCATCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: MCWKDSKPELSILRLTICLEVKV*IAIHQV Trigger: AACTTGATGAATGGCTATCAACACTTTGACCTCTAG...ACAGATGGTTAGCCTTAAAATTGATAACTCAGGTTTAGAGTCCTTCCAACACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGACCTTCAGCAACTGACGTCCAGAAATAATAATGTTCATGTGTTTGTATGTAGATATATGAAGTTGTaGGCTCTGTTGGAAACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TDLQQLTSRNNNVHVFVCRYMKL*ALLETR Trigger: CCTTGTTTCCAACAGAGCCAACAACTTCATATATCT...ACATACAAACACATGAACATTATTATTTCTGGACGTCAGTTGCTGAAGGTCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR-3UTR CAA 90 bp | TTATTATCCAACATAAAACATAGAACATTTGGGGCTGGTGAGATGGCTCAATGGTTCAGATATATGAAGTaGTTGGCTCTGTTGGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LLSNIKHRTFGAGEMAQWFRYMK*LALLET Trigger: TGTTTCCAACAGAGCCAACAACTTCATATATCTGAA...CCATTGAGCCATCTCACCAGCCCCAAATGTTCTATGTTTTATGTTGGATAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR CAA 72 bp | CTGCCCACCTGTCTGGGTTCTAGTCTGGGAGGCATCTaGGAATCTGGAAGGGAAGAGGGAACGAGGCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LPTCLGSSLGGI*ESGREEGTRLR Trigger: GCGCAGCCTCGTTCCCTCTTCCCTTCCAGATTCCAAGATGCCTCCCAGACTAGAACCCAGACAGGTGGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | GGTGAAAGCCACCTCAGCCTAGTTTACCCTCAGCCTTGTTGTGGCTCTGAGGCCTCCTGGACTTCAGCATaGAAGACACCTGCTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GESHLSLVYPQPCCGSEASWTSA*KTPADS Trigger: ACTGTCAGCAGGTGTCTTCCATGCTGAAGTCCAGGA...GGCCTCAGAGCCACAACAAGGCTGAGGGTAAACTAGGCTGAGGTGGCTTTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGCTTCTTCCAAATGTCCTCTGCCGTTTCCCAGACCCACCTTAGTTCGCACAAGTGGCCTGGTTTaGATGTCCAATGAACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSASSKCPLPFPRPTLVRTSGLV*MSNEQQ Trigger: TTGCTGTTCATTGGACATCCAAACCAGGCCACTTGT...GCGAACTAAGGTGGGTCTGGGAAACGGCAGAGGACATTTGGAAGAAGCACTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| CDS-3UTR TCA 90 bp | ATAAAACATAGAACATTTGGGGCTGGTGAGATGGCTCAATGGGTAAGAGCACCCCCTGCTGACAGTCAGTaGATGTTCCTTTGGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: IKHRTFGAGEMAQWVRAPPADSQ*MFLWVL Trigger: CAGTACCCAAAGGAACATTCACTGACTGTCAGCAGG...GGGTGCTCTTACCCATTGAGCCATCTCACCAGCCCCAAATGTTCTATGTTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR TCA 90 bp | TTATTATCCAACATAAAACATAGAACATTTGGGGCTGGTGAGATGGCTCAATGGCCTCCACAACCACCATaGCCGTTCCCTGGGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLSNIKHRTFGAGEMAQWPPQPP*PFPGCC Trigger: ACAGCACCCAGGGAACGGTCATGGTGGTTGTGGAGG...CCATTGAGCCATCTCACCAGCCCCAAATGTTCTATGTTTTATGTTGGATAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| CDS-3UTR TCA 90 bp | ATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATATTGGCCAGGTATTACCGGTCATCATCTGAGATaGCCATTCCTATCCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: MEEVVIAREGNKYWPGITGHHLR*PFLSKS Trigger: GGATTTGGATAGGAATGGTCATCTCAGATGATGACC...GGTAATACCTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR TCA 90 bp | AACTTTAAATCAGGGAATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATACTAGTACTAGAACTGTaGGGGCAGAGAAGGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NFKSGNGGGCHSQGREQILVLEL*GQRRTG Trigger: CCCTGTCCTTCTCTGCCCTCACAGTTCTAGTACTAG...TATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCATTCCCTGATTTAAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| CDS-3UTR CCA 90 bp | ACACACAAAATATGGTCTGAAGAAGGATTACTGCACTGTGCATGGCAGCGTGGAACAAACGTGTGTCCTTaGTGGCTACCTGATGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: THKIWSEEGLLHCAWQRGTNVCP*WLPDGH Trigger: ATGTCCATCAGGTAGCCACCAAGGACACACGTTTGT...TCCACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | AGAAATATCGCTAGAGACCCAGCCTCTTGGCCTGCCTTATGCCATGTGTTGGAACCACAGAGAACAAGTTaGATTAGGGTACAAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RNIARDPASWPALCHVLEPQRTS*IRVQMG Trigger: TCCCATTTGTACCCTAATCCAACTTGTTCTCTGTGG...TTCCAACACATGGCATAAGGCAGGCCAAGAGGCTGGGTCTCTAGCGATATTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| CDS-3UTR TCA 90 bp | ATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATATTGGCCAGGTATTACCTCCAATGAACAGCAATaGGCAGAGAAAACAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: MEEVVIAREGNKYWPGITSNEQQ*AEKTED Trigger: GTCTTCTGTTTTCTCTGCTCATTGCTGTTCATTGGA...GGTAATACCTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| CDS-3UTR TCA 90 bp | CACACAAAATATGGTCTGAAGAAGGATTACTGCACTGTGCATGGCAGCGTGGAAGGTTTGGATGTCCAATaGACAGCAATGAGCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HTKYGLKKDYCTVHGSVEGLDVQ*TAMSRE Trigger: TTCTCTGCTCATTGCTGTTCATTGGACATCCAAACC...TTCCACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| CDS-3UTR GCA 90 bp | ACTGACCTTCAGCAACTGACGTCCAGAAATAATAATGTTCATGTGTTTGTATGTAGAAGGACAGGGCCGTaGATCCTAGAGCCATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TDLQQLTSRNNNVHVFVCRRTGP*ILEPSP Trigger: TGGGGATGGCTCTAGGATGCACGGCCCTGTCCTTCT...ACATACAAACACATGAACATTATTATTTCTGGACGTCAGTTGCTGAAGGTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| 3UTR CAA 72 bp | TGTTCCTTTGGGTACTGTCATTTGCTGAGATTCTACTaGTTGAAGAACGAGTTCATGGTAGGTGTGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSFGYCHLLRFY*LKNEFMVGVGH Trigger: GTGGCCCACACCTACCATGAACTCGTTCTTCAACAAGTAGAATCTCAGCAAATGACAGTACCCAAAGGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| CDS-3UTR TCA 90 bp | TGTGAGTCAAAGGATGAGGAAACTGGCTGTGAACACAAATCTTCTAGAACTAGCTTCATAAGCCAGGAATaGCACAGCTCTTTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CESKDEETGCEHKSSRTSFISQE*HSSLEA Trigger: TGCCTCCAAAGAGCTGTGTCATTCCTGGCTTATGAA...GCTAGTTCTAGAAGATTTGTGTTCACAGCCAGTTTCCTCATCCTTTGACTCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| CDS-3UTR GCA 90 bp | ATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATATTGGCCAGGTATTACCTGTTTCATTGGAAACTaGATTTTCTGGGCACTGATC | + |
|
Preference number: 4 (lower is better) Translates to: MEEVVIAREGNKYWPGITCFIGN*IFWALI Trigger: GATCAGTGCCCAGAAAATGCAGTTTCCAATGAAACA...GGTAATACCTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | ATCCAAGGCTCAGAGAAACGTAAAGAAGATGGTGGAAAAGATCTTGTGAGTCAACTGATGATCCTCCTGTaGCCCACTCCAAATCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IQGSEKRKEDGGKDLVSQLMILL*PTPNLQ Trigger: CTGAAGATTTGGAGTGGGCCACAGGAGGATCATCAG...TTGACTCACAAGATCTTTTCCACCATCTTCTTTACGTTTCTCTGAGCCTTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| 3UTR CAA 72 bp | GGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATATaGGCCAGGTATTACCAAATAATGAGCCATCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GGGCHSQGREQI*ARYYQIMSHQN Trigger: GTTTTGATGGCTCATTATTTGGTAATACCTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| 3UTR CAA 72 bp | TCCTGTGGCCCACTCCAAATCTTCAGATATATGAAGTaGTTGGCTCTGTTGGAAACAAGGCAAATAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SCGPLQIFRYMK*LALLETRQIAS Trigger: GGAAGCTATTTGCCTTGTTTCCAACAGAGCCAACAACTTCATATATCTGAAGATTTGGAGTGGGCCACAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| CDS-3UTR GCA 90 bp | AGTCATTCTTCTAGAGTGCCTTATATATTCCAAGATTTCACTGATCTCCTTGTGCCAAATGTGGTCTGCTaGAGGATACAAGTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHSSRVPYIFQDFTDLLVPNVVC*RIQVAW Trigger: CCAGGCCACTTGTATCCTGCAGCAGACCACATTTGG...CACAAGGAGATCAGTGAAATCTTGGAATATATAAGGCACTCTAGAAGAATGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| CDS-3UTR CCA 90 bp | AGATTGGTGCACCAGACATTAGACAAAGACACAGAAATGGCAGAGCACTTCTGCATGGGTTCAGTCAAATaGCACAAGATCAGAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RLVHQTLDKDTEMAEHFCMGSVK*HKIREN Trigger: GTTTTCTCTGATCTTGTGCCATTTGACTGAACCCAT...GCAGAAGTGCTCTGCCATTTCTGTGTCTTTGTCTAATGTCTGGTGCACCAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | TGTATCCTCTTACAAAATTTTCCCTCATCCAAGGCTCAGAGAAACGTAAAGAAGTCCTGGACTTCAGCATaGAAGACACCTGCTGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: CILLQNFPSSKAQRNVKKSWTSA*KTPADS Trigger: ACTGTCAGCAGGTGTCTTCCATGCTGAAGTCCAGGA...CTTCTTTACGTTTCTCTGAGCCTTGGATGAGGGAAAATTTTGTAAGAGGATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | TTATTATCCAACATAAAACATAGAACATTTGGGGCTGGTGAGATGGCTCAATGGCTGATGATCCTCCTGTaGCCCACTCCAAATCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSNIKHRTFGAGEMAQWLMILL*PTPNLQ Trigger: CTGAAGATTTGGAGTGGGCCACAGGAGGATCATCAG...CCATTGAGCCATCTCACCAGCCCCAAATGTTCTATGTTTTATGTTGGATAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | ATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATATTGGCCAGGTATTACCATATCTCTGTTTCATTaGAAACTGCATTTTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MEEVVIAREGNKYWPGITISLFH*KLHFLG Trigger: GCCCAGAAAATGCAGTTTCCAATGAAACAGAGATAT...GGTAATACCTGGCCAATATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233053.2 |
||
| CDS-3UTR TCA 90 bp | GATGAGGAAACTGGCTGTGAACACAAATCTTCTAGAACTAGCATAAGTAGACCACATGGTGTGCAAAAGTaGCAGTCCCTTGGAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: DEETGCEHKSSRTSISRPHGVQK*QSLGRN Trigger: ATTTCTTCCAAGGGACTGTCACTTTTGCACACCATG...TGGTCTACTTATGCTAGTTCTAGAAGATTTGTGTTCACAGCCAGTTTCCTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | AACAATACTTTGAGAGAAAATGACACTGACCTTCAGCAACTGACGTCCAGAAATACAAACGTGTGTCCTTaGTGGCTACCTGATGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: NNTLRENDTDLQQLTSRNTNVCP*WLPDGH Trigger: ATGTCCATCAGGTAGCCACCAAGGACACACGTTTGT...ATTTCTGGACGTCAGTTGCTGAAGGTCAGTGTCATTTTCTCTCAAAGTATTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | ACACACAAAATATGGTCTGAAGAAGGATTACTGCACTGTGCATGGCAGCGTGGATATCTACTGTTTCATTaGAAACTGCATTTTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: THKIWSEEGLLHCAWQRGYLLFH*KLHFLG Trigger: GCCCAGAAAATGCAGTTTCCAATGAAACAGTAGATA...TCCACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| 3UTR CAA 72 bp | CTGACAGTCAGTGAATGTTCCTTTGGGTACTGTCATTaGCTGAGATTCTACTTGTTGAAGAACGAGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LTVSECSFGYCH*LRFYLLKNEFM Trigger: CATGAACTCGTTCTTCAACAAGTAGAATCTCAGCAAATGACAGTACCCAAAGGAACATTCACTGACTGTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR CAA 72 bp | TGTGGCCCACTCCAAATCTTCAGATATATGAAGTTGTaGGCTCTGTTGGAAACAAGGCAAATAGCTTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: CGPLQIFRYMKL*ALLETRQIASY Trigger: ATAGGAAGCTATTTGCCTTGTTTCCAACAGAGCCAACAACTTCATATATCTGAAGATTTGGAGTGGGCCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR CAA 72 bp | CCGAGAACAAAGTGGAAGGCAATTACTGAGCCTTTGTaGCAAATAATGATGGTCTTTCCATGTTCAGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: PRTKWKAITEPL*QIMMVFPCSDC Trigger: GCAATCTGAACATGGAAAGACCATCATTATTTGCAACAAAGGCTCAGTAATTGCCTTCCACTTTGTTCTCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| CDS-3UTR TCA 90 bp | AACAATACTTTGAGAGAAAATGACACTGACCTTCAGCAACTGACGTCCAGAAATGGTCATCATCTGAGATaGCCATTCCTATCCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: NNTLRENDTDLQQLTSRNGHHLR*PFLSKS Trigger: GGATTTGGATAGGAATGGTCATCTCAGATGATGACC...ATTTCTGGACGTCAGTTGCTGAAGGTCAGTGTCATTTTCTCTCAAAGTATTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGTAAAGCCCAGAGAAAACAAAGCAGGGCACCCCTGAAATTTCTCTCTGTTTTTCCATGTTCAGATTaGATATCTCTGTTTCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: CCKAQRKQSRAPLKFLSVFPCSD*ISLFHW Trigger: CCAATGAAACAGAGATATGCAATCTGAACATGGAAA...AACAGAGAGAAATTTCAGGGGTGCCCTGCTTTGTTTTCTCTGGGCTTTACAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | AACTTTAAATCAGGGAATGGAGGAGGTTGTCATAGCCAGGGAAGGGAACAAATAATGGGTTCAGTCAAATaGCACAAGATCAGAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: NFKSGNGGGCHSQGREQIMGSVK*HKIREN Trigger: GTTTTCTCTGATCTTGTGCCATTTGACTGAACCCAT...TATTTGTTCCCTTCCCTGGCTATGACAACCTCCTCCATTCCCTGATTTAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | ATCCAAGGCTCAGAGAAACGTAAAGAAGATGGTGGAAAAGATCTTGTGAGTCAATCCTCCAAAAGCAAATaGGTTCAGTCAAATGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: IQGSEKRKEDGGKDLVSQSSKSK*VQSNGT Trigger: TGTGCCATTTGACTGAACCCATTTGCTTTTGGAGGA...TTGACTCACAAGATCTTTTCCACCATCTTCTTTACGTTTCTCTGAGCCTTGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | TCTTGTGAGTCAAAGGATGAGGAAACTGGCTGTGAACACAAATCTTCTAGAACTTCCTCCAAAAGCAAATaGGTTCAGTCAAATGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SCESKDEETGCEHKSSRTSSKSK*VQSNGT Trigger: TGTGCCATTTGACTGAACCCATTTGCTTTTGGAGGA...AGTTCTAGAAGATTTGTGTTCACAGCCAGTTTCCTCATCCTTTGACTCACAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | ACACACAAAATATGGTCTGAAGAAGGATTACTGCACTGTGCATGGCAGCGTGGACTCATATCTTCTTGCTaGTATTCTAAGATCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: THKIWSEEGLLHCAWQRGLISSC*YSKIRD Trigger: ATCTCTGATCTTAGAATACCAGCAAGAAGATATGAG...TCCACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTTAATTATTTTCTTCTTTCATGGAGCTCCAAACCAGCAGTGCTTCTTCCAAATGACACAGCTCTTTaGAGGCAGTGGGTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFNYFLLSWSSKPAVLLPNDTAL*RQWVFS Trigger: AGAGAAAACCCACTGCCTCCAAAGAGCTGTGTCATT...TGGAAGAAGCACTGCTGGTTTGGAGCTCCATGAAAGAAGAAAATAATTAAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| CDS-3UTR TCA 90 bp | ATGTGTTGGAAGGACTCTAAACCTGAGTTATCAATTTTAAGGCTAACCATCTGTCATGGTGTGCAAAAGTaGCAGTCCCTTGGAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: MCWKDSKPELSILRLTICHGVQK*QSLGRN Trigger: ATTTCTTCCAAGGGACTGTCACTTTTGCACACCATG...ACAGATGGTTAGCCTTAAAATTGATAACTCAGGTTTAGAGTCCTTCCAACACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | ATCCAAGGCTCAGAGAAACGTAAAGAAGATGGTGGAAAAGATCTTGTGAGTCAAAAAGTGACAGTCCCTTaGAAGAAATCAAGGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IQGSEKRKEDGGKDLVSQKVTVP*KKSRLK Trigger: TTTCAGCCTTGATTTCTTCCAAGGGACTGTCACTTT...TTGACTCACAAGATCTTTTCCACCATCTTCTTTACGTTTCTCTGAGCCTTGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTTAATTATTTTCTTCTTTCATGGAGCTCCAAACCAGCAGTGCTTCTTCCAGCAATTTCACCTACATaGTGTGCAAAAGTGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFNYFLLSWSSKPAVLLPAISPT*CAKVTV Trigger: GACTGTCACTTTTGCACACCATGTAGGTGAAATTGC...TGGAAGAAGCACTGCTGGTTTGGAGCTCCATGAAAGAAGAAAATAATTAAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | GATGAGGAAACTGGCTGTGAACACAAATCTTCTAGAACTAGCATAAGTAGACCAGGAAACTGCATTTTCTaGGCACTGATCACAATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DEETGCEHKSSRTSISRPGNCIF*ALITIK Trigger: TTTGATTGTGATCAGTGCCCAGAAAATGCAGTTTCC...TGGTCTACTTATGCTAGTTCTAGAAGATTTGTGTTCACAGCCAGTTTCCTCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| 3UTR CAA 72 bp | GTACATGGCTTACACACATACCTAGAGGTCAAAGTGTaGATAGCCATTCATCAAGTTAGATTCCCTATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VHGLHTYLEVKV*IAIHQVRFPIL Trigger: GAGAATAGGGAATCTAACTTGATGAATGGCTATCAACACTTTGACCTCTAGGTATGTGTGTAAGCCATGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTTAATTATTTTCTTCTTTCATGGAGCTCCAAACCAGCAGTGCTTCTTCCAGTGGAAGGCAATTACTaGGCCTTTGTTGCAAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFNYFLLSWSSKPAVLLPVEGNY*AFVANN Trigger: ATTATTTGCAACAAAGGCTCAGTAATTGCCTTCCAC...TGGAAGAAGCACTGCTGGTTTGGAGCTCCATGAAAGAAGAAAATAATTAAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| CDS-3UTR GCA 90 bp | GATGAGGAAACTGGCTGTGAACACAAATCTTCTAGAACTAGCATAAGTAGACCAACCATGTCATATTTGTaGAGTGTTGTCCATTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: DEETGCEHKSSRTSISRPTMSYL*SVVHSN Trigger: ATTGGAATGGACAACACTGCACAAATATGACATGGT...TGGTCTACTTATGCTAGTTCTAGAAGATTTGTGTTCACAGCCAGTTTCCTCATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR GCA 90 bp | AACAATACTTTGAGAGAAAATGACACTGACCTTCAGCAACTGACGTCCAGAAATTGTTTCATTGGAAACTaGATTTTCTGGGCACTGATC | + |
|
Preference number: 4 (lower is better) Translates to: NNTLRENDTDLQQLTSRNCFIGN*IFWALI Trigger: GATCAGTGCCCAGAAAATGCAGTTTCCAATGAAACA...ATTTCTGGACGTCAGTTGCTGAAGGTCAGTGTCATTTTCTCTCAAAGTATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | TGTATCCTCTTACAAAATTTTCCCTCATCCAAGGCTCAGAGAAACGTAAAGAAGATGGGTTCAGTCAAATaGCACAAGATCAGAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CILLQNFPSSKAQRNVKKMGSVK*HKIREN Trigger: GTTTTCTCTGATCTTGTGCCATTTGACTGAACCCAT...CTTCTTTACGTTTCTCTGAGCCTTGGATGAGGGAAAATTTTGTAAGAGGATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079163.5 ENSMUST00000176594.3 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | GCAACAAACAATACTTTGAGAGAAAATGACACTGACCTTCAGCAACTGACGTCCCTCATATCTTCTTGCTaGTATTCTAAGATCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ATNNTLRENDTDLQQLTSLISSC*YSKIRD Trigger: ATCTCTGATCTTAGAATACCAGCAAGAAGATATGAG...GGACGTCAGTTGCTGAAGGTCAGTGTCATTTTCTCTCAAAGTATTGTTTGTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | TGTATCCTCTTACAAAATTTTCCCTCATCCAAGGCTCAGAGAAACGTAAAGAAGAAAGTGACAGTCCCTTaGAAGAAATCAAGGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CILLQNFPSSKAQRNVKKKVTVP*KKSRLK Trigger: TTTCAGCCTTGATTTCTTCCAAGGGACTGTCACTTT...CTTCTTTACGTTTCTCTGAGCCTTGGATGAGGGAAAATTTTGTAAGAGGATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | AGTCATTCTTCTAGAGTGCCTTATATATTCCAAGATTTCACTGATCTCCTTGTGGCAATTTCACCTACATaGTGTGCAAAAGTGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SHSSRVPYIFQDFTDLLVAISPT*CAKVTV Trigger: GACTGTCACTTTTGCACACCATGTAGGTGAAATTGC...CACAAGGAGATCAGTGAAATCTTGGAATATATAAGGCACTCTAGAAGAATGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | TGTATCCTCTTACAAAATTTTCCCTCATCCAAGGCTCAGAGAAACGTAAAGAAGGGGTTTTCTCTAAGTTaGCATACTTATCATCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CILLQNFPSSKAQRNVKKGFSLS*HTYHLD Trigger: GTCCAGATGATAAGTATGCCAACTTAGAGAAAACCC...CTTCTTTACGTTTCTCTGAGCCTTGGATGAGGGAAAATTTTGTAAGAGGATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| 3UTR CAA 72 bp | TATCCGAGAACAAAGTGGAAGGCAATTACTGAGCCTTaGTTGCAAATAATGATGGTCTTTCCATGTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YPRTKWKAITEP*LQIMMVFPCSD Trigger: ATCTGAACATGGAAAGACCATCATTATTTGCAACAAAGGCTCAGTAATTGCCTTCCACTTTGTTCTCGGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| CDS-3UTR GCA 90 bp | TTATTATCCAACATAAAACATAGAACATTTGGGGCTGGTGAGATGGCTCAATGGCAGATTCCATGTCTTTaGATTTCTTCTCTCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSNIKHRTFGAGEMAQWQIPCL*ISSLMS Trigger: AGACATGAGAGAAGAAATGCAAAGACATGGAATCTG...CCATTGAGCCATCTCACCAGCCCCAAATGTTCTATGTTTTATGTTGGATAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR GCA 90 bp | AACAATACTTTGAGAGAAAATGACACTGACCTTCAGCAACTGACGTCCAGAAATACCATGTCATATTTGTaGAGTGTTGTCCATTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NNTLRENDTDLQQLTSRNTMSYL*SVVHSN Trigger: ATTGGAATGGACAACACTGCACAAATATGACATGGT...ATTTCTGGACGTCAGTTGCTGAAGGTCAGTGTCATTTTCTCTCAAAGTATTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | ACTGACCTTCAGCAACTGACGTCCAGAAATAATAATGTTCATGTGTTTGTATGTGGAAACTGCATTTTCTaGGCACTGATCACAATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TDLQQLTSRNNNVHVFVCGNCIF*ALITIK Trigger: TTTGATTGTGATCAGTGCCCAGAAAATGCAGTTTCC...ACATACAAACACATGAACATTATTATTTCTGGACGTCAGTTGCTGAAGGTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CCA 90 bp | AACAATACTTTGAGAGAAAATGACACTGACCTTCAGCAACTGACGTCCAGAAATCAGCTTAGGATTAAATaGTCCAAAGAAAACCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NNTLRENDTDLQQLTSRNQLRIK*SKENLR Trigger: TCTTAGGTTTTCTTTGGACCATTTAATCCTAAGCTG...ATTTCTGGACGTCAGTTGCTGAAGGTCAGTGTCATTTTCTCTCAAAGTATTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| 3UTR CAA 72 bp | CTCCAAATCTTCAGATATATGAAGTTGTTGGCTCTGTaGGAAACAAGGCAAATAGCTTCCTATTTTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LQIFRYMKLLAL*ETRQIASYFHF Trigger: AAAGTGAAAATAGGAAGCTATTTGCCTTGTTTCCAACAGAGCCAACAACTTCATATATCTGAAGATTTGGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176594.3 |
||
| CDS-3UTR CAA 90 bp | GGTGAAAGCCACCTCAGCCTAGTTTACCCTCAGCCTTGTTGTGGCTCTGAGGCCACATCAAGGAGACCATaGCATGGGACAAACGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GESHLSLVYPQPCCGSEATSRRP*HGTNVC Trigger: ACACACGTTTGTCCCATGCAATGGTCTCCTTGATGT...GGCCTCAGAGCCACAACAAGGCTGAGGGTAAACTAGGCTGAGGTGGCTTTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CAA 90 bp | CACACAAAATATGGTCTGAAGAAGGATTACTGCACTGTGCATGGCAGCGTGGAAACATCAAGGAGACCATaGCATGGGACAAACGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HTKYGLKKDYCTVHGSVETSRRP*HGTNVC Trigger: ACACACGTTTGTCCCATGCAATGGTCTCCTTGATGT...TTCCACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGCTTCTTCCAAATGTCCTCTGCCGTTTCCCAGACCCACCTTAGTTCGCCTGAAGGTTAAGAATTaGGCTTCATTGAATCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSASSKCPLPFPRPTLVRLKVKN*ASLNLS Trigger: TGACAGATTCAATGAAGCCAAATTCTTAACCTTCAG...GCGAACTAAGGTGGGTCTGGGAAACGGCAGAGGACATTTGGAAGAAGCACTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| CDS GCA 90 bp | AACACTGTAGAAATAGCCACTGTGAAAAATACTCCAAATGTGGTCTaGTGCAGGATACAAGTGGCCTGGTTTGGATGTCCAATGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: NTVEIATVKNTPNVV*CRIQVAWFGCPMNS Trigger: GCTGTTCATTGGACATCCAAACCAGGCCACTTGTATCCTGCAGCAGACCACATTTGGAGTATTTTTCACAGTGGCTATTTCTACAGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| CDS CCA 90 bp | GTGAAAAATACTCCAAATGTGGTCTGCTGCAGGATACAAGTGGCCTaGTTTGGATGTCCAATGAACAGCAATGAGCAGAGAAAACAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VKNTPNVVCCRIQVA*FGCPMNSNEQRKQK Trigger: CTTCTGTTTTCTCTGCTCATTGCTGTTCATTGGACATCCAAACCAGGCCACTTGTATCCTGCAGCAGACCACATTTGGAGTATTTTTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| CDS-3UTR CAA 90 bp | CACACAAAATATGGTCTGAAGAAGGATTACTGCACTGTGCATGGCAGCGTGGAAAAAAGTGACAGTCCCTaGGAAGAAATCAAGGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HTKYGLKKDYCTVHGSVEKSDSP*EEIKAE Trigger: TTCAGCCTTGATTTCTTCCAAGGGACTGTCACTTTT...TTCCACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGTG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS GCA 90 bp | TGGACACCTCATACACTGTTCCATATCTACTGTTTCATTGGAAACTaGATTTTCTGGGCACTGATCACAATCAAAGCAGCAGTCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WTPHTLFHIYCFIGN*IFWALITIKAAVCC Trigger: ACAGCAGACTGCTGCTTTGATTGTGATCAGTGCCCAGAAAATGCAGTTTCCAATGAAACAGTAGATATGGAACAGTGTATGAGGTGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| CDS-3UTR CAA 90 bp | CACACAAAATATGGTCTGAAGAAGGATTACTGCACTGTGCATGGCAGCGTGGAACATATTTGTGCAGTGTaGTCCATTCCAATGTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HTKYGLKKDYCTVHGSVEHICAV*SIPMCC Trigger: ACAACACATTGGAATGGACAACACTGCACAAATATG...TTCCACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CAA 90 bp | ACACACAAAATATGGTCTGAAGAAGGATTACTGCACTGTGCATGGCAGCGTGGACATATTTGTGCAGTGTaGTCCATTCCAATGTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: THKIWSEEGLLHCAWQRGHICAV*SIPMCC Trigger: ACAACACATTGGAATGGACAACACTGCACAAATATG...TCCACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CAA 90 bp | ACACACAAAATATGGTCTGAAGAAGGATTACTGCACTGTGCATGGCAGCGTGGAATATCTACTGTTTCATaGGAAACTGCATTTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: THKIWSEEGLLHCAWQRGISTVS*ETAFSG Trigger: CCCAGAAAATGCAGTTTCCAATGAAACAGTAGATAT...TCCACGCTGCCATGCACAGTGCAGTAATCCTTCTTCAGACCATATTTTGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| CDS CCA 90 bp | TATCATCTGGACACCTCATACACTGTTCCATATCTACTGTTTCATTaGAAACTGCATTTTCTGGGCACTGATCACAATCAAAGCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: YHLDTSYTVPYLLFH*KLHFLGTDHNQSSS Trigger: ACTGCTGCTTTGATTGTGATCAGTGCCCAGAAAATGCAGTTTCCAATGAAACAGTAGATATGGAACAGTGTATGAGGTGTCCAGATGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| CDS CCA 90 bp | ATAAAGGGAGGAGATGTTACTAACCAGATTCCACAGAGAACAAGTTaGATTAGGGTACAAATGGGAATGACTATATTAGGTGCCCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: IKGGDVTNQIPQRTS*IRVQMGMTILGAPD Trigger: ATCAGGGGCACCTAATATAGTCATTCCCATTTGTACCCTAATCCAACTTGTTCTCTGTGGAATCTGGTTAGTAACATCTCCTCCCTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
||
| CDS-3UTR CAA 90 bp | CTCTTTGAAGTCCTCTTTCTTATAATTCCCAGAACTTTCTGCCCAGAGGTAGCAACAGATTCCATGTCTTaGCATTTCTTCTCTCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: LFEVLFLIIPRTFCPEVATDSMS*HFFSHV Trigger: GACATGAGAGAAGAAATGCAAAGACATGGAATCTGT...TGCTACCTCTGGGCAGAAAGTTCTGGGAATTATAAGAAAGAGGACTTCAAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CAA 90 bp | CTCTTTGAAGTCCTCTTTCTTATAATTCCCAGAACTTTCTGCCCAGAGGTAGCAAGATATATGAAGTTGTaGGCTCTGTTGGAAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFEVLFLIIPRTFCPEVARYMKL*ALLETR Trigger: CCTTGTTTCCAACAGAGCCAACAACTTCATATATCT...TGCTACCTCTGGGCAGAAAGTTCTGGGAATTATAAGAAAGAGGACTTCAAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CAA 90 bp | GATGAGGAAACTGGCTGTGAACACAAATCTTCTAGAACTAGCATAAGTAGACCAACAGATTCCATGTCTTaGCATTTCTTCTCTCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: DEETGCEHKSSRTSISRPTDSMS*HFFSHV Trigger: GACATGAGAGAAGAAATGCAAAGACATGGAATCTGT...TGGTCTACTTATGCTAGTTCTAGAAGATTTGTGTTCACAGCCAGTTTCCTCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CAA 90 bp | ATCCAAGGCTCAGAGAAACGTAAAGAAGATGGTGGAAAAGATCTTGTGAGTCAAAGATATATGAAGTTGTaGGCTCTGTTGGAAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: IQGSEKRKEDGGKDLVSQRYMKL*ALLETR Trigger: CCTTGTTTCCAACAGAGCCAACAACTTCATATATCT...TTGACTCACAAGATCTTTTCCACCATCTTCTTTACGTTTCTCTGAGCCTTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
||
| CDS-3UTR CAA 90 bp | TGTGAGTCAAAGGATGAGGAAACTGGCTGTGAACACAAATCTTCTAGAACTAGCTTCAGATATATGAAGTaGTTGGCTCTGTTGGAAACA | + |
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Preference number: 5 (lower is better) Translates to: CESKDEETGCEHKSSRTSFRYMK*LALLET Trigger: TGTTTCCAACAGAGCCAACAACTTCATATATCTGAA...GCTAGTTCTAGAAGATTTGTGTTCACAGCCAGTTTCCTCATCCTTTGACTCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
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| CDS-3UTR CAA 90 bp | ATCCAAGGCTCAGAGAAACGTAAAGAAGATGGTGGAAAAGATCTTGTGAGTCAACATATCTCTGTTTCATaGGAAACTGCATTTTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: IQGSEKRKEDGGKDLVSQHISVS*ETAFSG Trigger: CCCAGAAAATGCAGTTTCCAATGAAACAGAGATATG...TTGACTCACAAGATCTTTTCCACCATCTTCTTTACGTTTCTCTGAGCCTTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233053.2 |
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| CDS-3UTR CAA 90 bp | ATCCAAGGCTCAGAGAAACGTAAAGAAGATGGTGGAAAAGATCTTGTGAGTCAACTTTCCATGTTCAGATaGCATATCTCTGTTTCATTG | + |
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Preference number: 5 (lower is better) Translates to: IQGSEKRKEDGGKDLVSQLSMFR*HISVSL Trigger: CAATGAAACAGAGATATGCAATCTGAACATGGAAAG...TTGACTCACAAGATCTTTTCCACCATCTTCTTTACGTTTCTCTGAGCCTTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233053.2 |
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| CDS-3UTR CAA 90 bp | ACTGACCTTCAGCAACTGACGTCCAGAAATAATAATGTTCATGTGTTTGTATGTAAGAATTTGGCTTCATaGAATCTGTCAGGAAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: TDLQQLTSRNNNVHVFVCKNLAS*NLSGRF Trigger: GAACCTTCCTGACAGATTCAATGAAGCCAAATTCTT...ACATACAAACACATGAACATTATTATTTCTGGACGTCAGTTGCTGAAGGTCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
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| CDS-3UTR CAA 90 bp | ATGTGTTGGAAGGACTCTAAACCTGAGTTATCAATTTTAAGGCTAACCATCTGTTTCAGATATATGAAGTaGTTGGCTCTGTTGGAAACA | + |
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Preference number: 5 (lower is better) Translates to: MCWKDSKPELSILRLTICFRYMK*LALLET Trigger: TGTTTCCAACAGAGCCAACAACTTCATATATCTGAA...ACAGATGGTTAGCCTTAAAATTGATAACTCAGGTTTAGAGTCCTTCCAACACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
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| CDS CCA 72 bp | ACTCCAAATGTGGTCTGCTGCAGGATACAAGTGGCCTaGTTTGGATGTCCAATGAACAGCAATGAGCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: TPNVVCCRIQVA*FGCPMNSNEQR Trigger: TCTCTGCTCATTGCTGTTCATTGGACATCCAAACCAGGCCACTTGTATCCTGCAGCAGACCACATTTGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
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| CDS GCA 72 bp | GAAATAGCCACTGTGAAAAATACTCCAAATGTGGTCTaGTGCAGGATACAAGTGGCCTGGTTTGGATGTCCA | + |
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Preference number: 6 (lower is better) Translates to: EIATVKNTPNVV*CRIQVAWFGCP Trigger: TGGACATCCAAACCAGGCCACTTGTATCCTGCAGCAGACCACATTTGGAGTATTTTTCACAGTGGCTATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
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| CDS CCA 72 bp | ACACAGCTCTTTGGAGGCAGTGGGTTTTCTCTAAGTTaGCATACTTATCATCTGGACACCTCATACACTGTT | + |
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Preference number: 6 (lower is better) Translates to: TQLFGGSGFSLS*HTYHLDTSYTV Trigger: AACAGTGTATGAGGTGTCCAGATGATAAGTATGCCAACTTAGAGAAAACCCACTGCCTCCAAAGAGCTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
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| CDS CCA 72 bp | GGGAAACTGGTCATGGTCACTCAGCTTAGGATTAAATaGTCCAAAGAAAACCCTTGGTGTCCCAGAATTAAT | + |
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Preference number: 6 (lower is better) Translates to: GKLVMVTQLRIK*SKENPWCPRIN Trigger: ATTAATTCTGGGACACCAAGGGTTTTCTTTGGACCATTTAATCCTAAGCTGAGTGACCATGACCAGTTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079163.5 ENSMUST00000233053.2 |
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| CDS TCA 72 bp | TCTACTGTTTCATTGGAAACTGCATTTTCTGGGCACTaGTCACAATCAAAGCAGCAGTCTGCTGTTTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: STVSLETAFSGH*SQSKQQSAVCF Trigger: GAAACAAACAGCAGACTGCTGCTTTGATTGTGATCAGTGCCCAGAAAATGCAGTTTCCAATGAAACAGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
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| CDS GCA 72 bp | CATACACTGTTCCATATCTACTGTTTCATTGGAAACTaGATTTTCTGGGCACTGATCACAATCAAAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: HTLFHIYCFIGN*IFWALITIKAA Trigger: TGCTGCTTTGATTGTGATCAGTGCCCAGAAAATGCAGTTTCCAATGAAACAGTAGATATGGAACAGTGTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
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| CDS CCA 72 bp | GACACCTCATACACTGTTCCATATCTACTGTTTCATTaGAAACTGCATTTTCTGGGCACTGATCACAATCAA | + |
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Preference number: 6 (lower is better) Translates to: DTSYTVPYLLFH*KLHFLGTDHNQ Trigger: TTGATTGTGATCAGTGCCCAGAAAATGCAGTTTCCAATGAAACAGTAGATATGGAACAGTGTATGAGGTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
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| CDS CCA 72 bp | GGAGATGTTACTAACCAGATTCCACAGAGAACAAGTTaGATTAGGGTACAAATGGGAATGACTATATTAGGT | + |
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Preference number: 6 (lower is better) Translates to: GDVTNQIPQRTS*IRVQMGMTILG Trigger: ACCTAATATAGTCATTCCCATTTGTACCCTAATCCAACTTGTTCTCTGTGGAATCTGGTTAGTAACATCTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
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| CDS CAA 72 bp | TTTGTTGCAAATAATGATGGTCTTTCCATGTTCAGATaGCATATCTCTGTCAATAAAGGGAGGAGATGTTAC | + |
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Preference number: 6 (lower is better) Translates to: FVANNDGLSMFR*HISVNKGRRCY Trigger: GTAACATCTCCTCCCTTTATTGACAGAGATATGCAATCTGAACATGGAAAGACCATCATTATTTGCAACAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079163.5 |
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