Pregenerated sensors for VMN2R1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027824Ensembl transcript IDs: ENSMUST00000029406.6
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTAGAGGCCTGGCACCCAGAAGAGGGAATTGGTGCCCCTGGAACTaGGTTGCAAACAATTGTGAGCCAGCATGTCAGACAGAAGAAACT | + |
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Preference number: 1 (lower is better) Translates to: CRGLAPRRGNWCPWN*VANNCEPACQTEET Trigger: AGTTTCTTCTGTCTGACATGCTGGCTCACAATTGTTTGCAACTCAGTTCCAGGGGCACCAATTCCCTCTTCTGGGTGCCAGGCCTCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR CCA 90 bp | TGGTGTCAGGGTTTGGAAGCTGATTATGGGATGGATCCCCGGATATaGCAGTCTCTAGATGGTCCATCCTTTCGTCACAGCTCCAAACTT | + |
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Preference number: 1 (lower is better) Translates to: WCQGLEADYGMDPRI*QSLDGPSFRHSSKL Trigger: AAGTTTGGAGCTGTGACGAAAGGATGGACCATCTAGAGACTGCCATATCCGGGGATCCATCCCATAATCAGCTTCCAAACCCTGACACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR GCA 90 bp | GTTTCTGACTTTCCCTGCCTAGCTAGTCATCATGGTATCACTTTCTaGTCTGACACACCTACAGAAGAAATCTCCACCAAGTTTGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: VSDFPCLASHHGITF*SDTPTEEISTKFEE Trigger: TTCCTCAAACTTGGTGGAGATTTCTTCTGTAGGTGTGTCAGAGCAGAAAGTGATACCATGATGACTAGCTAGGCAGGGAAAGTCAGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR TCA 90 bp | GAAATTCCTAGGCAAATGGATGGAACTGGAGGGCATCATCCTGAGTaGGGTAACCCAATCACAAAGGAACTCACACAATATGTACTCATT | + |
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Preference number: 1 (lower is better) Translates to: EIPRQMDGTGGHHPE*GNPITKELTQYVLI Trigger: AATGAGTACATATTGTGTGAGTTCCTTTGTGATTGGGTTACCTCACTCAGGATGATGCCCTCCAGTTCCATCCATTTGCCTAGGAATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR TCA 90 bp | TCTGAAACCCAAAGTGAAACACAGCACAATGACAAAGTAAGCATCTaGCTCATCTCTTCTAGACTCGGTCAAACAGTTGTGCTGTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: SETQSETQHNDKVSI*LISSRLGQTVVLSS Trigger: TGAAGACAGCACAACTGTTTGACCGAGTCTAGAAGAGATGAGTCAGATGCTTACTTTGTCATTGTGCTGTGTTTCACTTTGGGTTTCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR TCA 90 bp | TTTCATGGGACAATGTCCTATAAACTACATGAAGGAGGAAGCCTGTaGTCTGATCTGTTGGCAAATCTATTGTTTCTGAGTTTGCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: FHGTMSYKLHEGGSL*SDLLANLLFLSLLR Trigger: CCTAAGCAAACTCAGAAACAATAGATTTGCCAACAGATCAGATCACAGGCTTCCTCCTTCATGTAGTTTATAGGACATTGTCCCATGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR TCA 90 bp | TTAAAGAGATGCATACCTATCATCATTAATACCTTTAGAGGAAACTaGATTCTATTAGTGCTTCAAACCCCTCAGTCCCATGTCTTTGAA | + |
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Preference number: 1 (lower is better) Translates to: LKRCIPIIINTFRGN*ILLVLQTPQSHVFE Trigger: TTCAAAGACATGGGACTGAGGGGTTTGAAGCACTAATAGAATTCAGTTTCCTCTAAAGGTATTAATGATGATAGGTATGCATCTCTTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR CAA 90 bp | GAGGCCTGGCACCCAGAAGAGGGAATTGGTGCCCCTGGAACTGAGTaGCAAACAATTGTGAGCCAGCATGTCAGACAGAAGAAACTAACC | + |
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Preference number: 2 (lower is better) Translates to: EAWHPEEGIGAPGTE*QTIVSQHVRQKKLT Trigger: GGTTAGTTTCTTCTGTCTGACATGCTGGCTCACAATTGTTTGCAACTCAGTTCCAGGGGCACCAATTCCCTCTTCTGGGTGCCAGGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR-3UTR GCA 90 bp | GTAGAGGCCTGGCACCCAGAAGAGGGAATTGGTGCCCCTGGAACTGAGTTGCAAGATGAAACACAAAAATaGAGGTTGAGCAAGGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: VEAWHPEEGIGAPGTELQDETQK*RLSKGV Trigger: GACACCCTTGCTCAACCTGCATTTTTGTGTTTCATC...TTGCAACTCAGTTCCAGGGGCACCAATTCCCTCTTCTGGGTGCCAGGCCTCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR-3UTR CCA 90 bp | GTAGAGGCCTGGCACCCAGAAGAGGGAATTGGTGCCCCTGGAACTGAGTTGCAACAGAAGAAACTAACCTaGGTCTGCTGTAAAAACTGC | + |
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Preference number: 2 (lower is better) Translates to: VEAWHPEEGIGAPGTELQQKKLT*VCCKNC Trigger: GCAGTTTTTACAGCAGACCCAGGTTAGTTTCTTCTG...TTGCAACTCAGTTCCAGGGGCACCAATTCCCTCTTCTGGGTGCCAGGCCTCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR-3UTR TCA 90 bp | GTAGAGGCCTGGCACCCAGAAGAGGGAATTGGTGCCCCTGGAACTGAGTTGCAACGTTCTAATGTATGTTaGATGACATGTCACAGAACA | + |
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Preference number: 2 (lower is better) Translates to: VEAWHPEEGIGAPGTELQRSNVC*MTCHRT Trigger: TGTTCTGTGACATGTCATTCAACATACATTAGAACG...TTGCAACTCAGTTCCAGGGGCACCAATTCCCTCTTCTGGGTGCCAGGCCTCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR-3UTR GCA 90 bp | AACAGTTGTGCTGTCTTCATGCCTCTCCTGTTTTTCACTAGTCATGGCTGTACCGGTGACATCCCTGCATaGCACATGAAATTCACAGCT | + |
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Preference number: 2 (lower is better) Translates to: NSCAVFMPLLFFTSHGCTGDIPA*HMKFTA Trigger: AGCTGTGAATTTCATGTGGCATGCAGGGATGTCACC...GGTACAGCCATGACTAGTGAAAAACAGGAGAGGCATGAAGACAGCACAACTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR-3UTR CCA 90 bp | CAAACAGTTGTGCTGTCTTCATGCCTCTCCTGTTTTTCACTAGTCATGGCTGTAAAACATGTAGAGGCCTaGCACCCAGAAGAGGGAATT | + |
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Preference number: 2 (lower is better) Translates to: QTVVLSSCLSCFSLVMAVKHVEA*HPEEGI Trigger: AATTCCCTCTTCTGGGTGCCAGGCCTCTACATGTTT...TACAGCCATGACTAGTGAAAAACAGGAGAGGCATGAAGACAGCACAACTGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR-3UTR CCA 90 bp | AACAGTTGTGCTGTCTTCATGCCTCTCCTGTTTTTCACTAGTCATGGCTGTACCTGCTGGAAGAGTGACTaGGTCTTAATGCTAGATATA | + |
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Preference number: 2 (lower is better) Translates to: NSCAVFMPLLFFTSHGCTCWKSD*VLMLDI Trigger: TATATCTAGCATTAAGACCCAGTCACTCTTCCAGCA...GGTACAGCCATGACTAGTGAAAAACAGGAGAGGCATGAAGACAGCACAACTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR-3UTR TCA 90 bp | CAAACAGTTGTGCTGTCTTCATGCCTCTCCTGTTTTTCACTAGTCATGGCTGTATATCACTTTCTGCTCTaGCACACCTACAGAAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: QTVVLSSCLSCFSLVMAVYHFLL*HTYRRN Trigger: ATTTCTTCTGTAGGTGTGTCAGAGCAGAAAGTGATA...TACAGCCATGACTAGTGAAAAACAGGAGAGGCATGAAGACAGCACAACTGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR TCA 72 bp | CTGGCACCCAGAAGAGGGAATTGGTGCCCCTGGAACTaGGTTGCAAACAATTGTGAGCCAGCATGTCAGACA | + |
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Preference number: 3 (lower is better) Translates to: LAPRRGNWCPWN*VANNCEPACQT Trigger: TGTCTGACATGCTGGCTCACAATTGTTTGCAACTCAGTTCCAGGGGCACCAATTCCCTCTTCTGGGTGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR TCA 72 bp | CTAAGCAACCACATGGGGGCTCACGACCACCTGAAATaGGATCCAGTGCCCTCTTATGTTGTGTCTGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: LSNHMGAHDHLK*DPVPSYVVSED Trigger: GTCTTCAGACACAACATAAGAGGGCACTGGATCTCATTTCAGGTGGTCGTGAGCCCCCATGTGGTTGCTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR CCA 72 bp | GGTTTGGAAGCTGATTATGGGATGGATCCCCGGATATaGCAGTCTCTAGATGGTCCATCCTTTCGTCACAGC | + |
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Preference number: 3 (lower is better) Translates to: GLEADYGMDPRI*QSLDGPSFRHS Trigger: GCTGTGACGAAAGGATGGACCATCTAGAGACTGCCATATCCGGGGATCCATCCCATAATCAGCTTCCAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR TCA 72 bp | TTGCTAGTGTATGCAATGGTGTCAGGGTTTGGAAGCTaGTTATGGGATGGATCCCCGGATATGGCAGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: LLVYAMVSGFGS*LWDGSPDMAVS Trigger: AGAGACTGCCATATCCGGGGATCCATCCCATAATCAGCTTCCAAACCCTGACACCATTGCATACACTAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR TCA 72 bp | GCCTGTGATCTGATCTGTTGGCAAATCTATTGTTTCTaGGTTTGCTTAGGGGCAGGTATGCCAAGAGAACTC | + |
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Preference number: 3 (lower is better) Translates to: ACDLICWQIYCF*VCLGAGMPREL Trigger: GAGTTCTCTTGGCATACCTGCCCCTAAGCAAACTCAGAAACAATAGATTTGCCAACAGATCAGATCACAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR TCA 72 bp | AGGCAAATGGATGGAACTGGAGGGCATCATCCTGAGTaGGGTAACCCAATCACAAAGGAACTCACACAATAT | + |
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Preference number: 3 (lower is better) Translates to: RQMDGTGGHHPE*GNPITKELTQY Trigger: ATATTGTGTGAGTTCCTTTGTGATTGGGTTACCTCACTCAGGATGATGCCCTCCAGTTCCATCCATTTGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR GCA 72 bp | TTTCCCTGCCTAGCTAGTCATCATGGTATCACTTTCTaGTCTGACACACCTACAGAAGAAATCTCCACCAAG | + |
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Preference number: 3 (lower is better) Translates to: FPCLASHHGITF*SDTPTEEISTK Trigger: CTTGGTGGAGATTTCTTCTGTAGGTGTGTCAGAGCAGAAAGTGATACCATGATGACTAGCTAGGCAGGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR GCA 72 bp | TCTTCTAGACTCGGTCAAACAGTTGTGCTGTCTTCATaGCTCTCCTGTTTTTCACTAGTCATGGCTGTACCA | + |
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Preference number: 3 (lower is better) Translates to: SSRLGQTVVLSS*LSCFSLVMAVP Trigger: TGGTACAGCCATGACTAGTGAAAAACAGGAGAGGCATGAAGACAGCACAACTGTTTGACCGAGTCTAGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR-3UTR CAA 90 bp | CAAACAGTTGTGCTGTCTTCATGCCTCTCCTGTTTTTCACTAGTCATGGCTGTAGAGCAGGATCATACCTaGTTAAAGAGATGCATACCT | + |
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Preference number: 3 (lower is better) Translates to: QTVVLSSCLSCFSLVMAVEQDHT*LKRCIP Trigger: AGGTATGCATCTCTTTAACAAGGTATGATCCTGCTC...TACAGCCATGACTAGTGAAAAACAGGAGAGGCATGAAGACAGCACAACTGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR GCA 72 bp | ACAACATCAGCAGATGCTTCAGATGAAACACAAAAATaGAGGTTGAGCAAGGGTGTCATGATAGGTGACATC | + |
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Preference number: 3 (lower is better) Translates to: TTSADASDETQK*RLSKGVMIGDI Trigger: GATGTCACCTATCATGACACCCTTGCTCAACCTGCATTTTTGTGTTTCATCTGAAGCATCTGCTGATGTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR-3UTR CAA 90 bp | ATTTCCCCAGACTTCAGAGCCAGAATGAGAAAAGGACTCTGTGAAACTTGTATTACACAAAAATGCAGGTaGAGCAAGGGTGTCATGATA | + |
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Preference number: 3 (lower is better) Translates to: ISPDFRARMRKGLCETCITQKCR*SKGVMI Trigger: TATCATGACACCCTTGCTCAACCTGCATTTTTGTGT...AATACAAGTTTCACAGAGTCCTTTTCTCATTCTGGCTCTGAAGTCTGGGGAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR TCA 72 bp | CTAATATTACCCTACAACATCAGCAGATGCTTCAGATaGAACACAAAAATGCAGGTTGAGCAAGGGTGTCAT | + |
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Preference number: 3 (lower is better) Translates to: LILPYNISRCFR*NTKMQVEQGCH Trigger: ATGACACCCTTGCTCAACCTGCATTTTTGTGTTTCATCTGAAGCATCTGCTGATGTTGTAGGGTAATATTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR TCA 72 bp | ACAACTCAGCCATTTCCCCAGACTTCAGAGCCAGAATaGGAAAAGGACTCTGTGAAACTTGTATTCTATTTA | + |
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Preference number: 3 (lower is better) Translates to: TTQPFPQTSEPE*EKDSVKLVFYL Trigger: TAAATAGAATACAAGTTTCACAGAGTCCTTTTCTCATTCTGGCTCTGAAGTCTGGGGAAATGGCTGAGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR TCA 72 bp | CCTGAAATGAGATCCAGTGCCCTCTTATGTTGTGTCTaGAGACAGGGACAGTGTACTCAAATGTATAAAATA | + |
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Preference number: 3 (lower is better) Translates to: PEMRSSALLCCV*RQGQCTQMYKI Trigger: TATTTTATACATTTGAGTACACTGTCCCTGTCTTCAGACACAACATAAGAGGGCACTGGATCTCATTTCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR TCA 72 bp | ACAATGTCCTATAAACTACATGAAGGAGGAAGCCTGTaGTCTGATCTGTTGGCAAATCTATTGTTTCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: TMSYKLHEGGSL*SDLLANLLFLS Trigger: ACTCAGAAACAATAGATTTGCCAACAGATCAGATCACAGGCTTCCTCCTTCATGTAGTTTATAGGACATTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR TCA 72 bp | TGCATACCTATCATCATTAATACCTTTAGAGGAAACTaGATTCTATTAGTGCTTCAAACCCCTCAGTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: CIPIIINTFRGN*ILLVLQTPQSH Trigger: ATGGGACTGAGGGGTTTGAAGCACTAATAGAATTCAGTTTCCTCTAAAGGTATTAATGATGATAGGTATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR TCA 72 bp | CTTCTTTACTTCTGTAGTCAAATGAACACATGTAATTaGTGCTGCCCACAGTTCTATAAGTTCTGTTTGCCA | + |
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Preference number: 3 (lower is better) Translates to: LLYFCSQMNTCN*CCPQFYKFCLP Trigger: TGGCAAACAGAACTTATAGAACTGTGGGCAGCATCAATTACATGTGTTCATTTGACTACAGAAGTAAAGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR TCA 72 bp | TACCATGTTCTGGTCTTCTTTACTTCTGTAGTCAAATaGACACATGTAATTGATGCTGCCCACAGTTCTATA | + |
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Preference number: 3 (lower is better) Translates to: YHVLVFFTSVVK*THVIDAAHSSI Trigger: TATAGAACTGTGGGCAGCATCAATTACATGTGTTCATTTGACTACAGAAGTAAAGAAGACCAGAACATGGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR GCA 72 bp | AAAAGCCTGGAGCAGGATCATACCTTGTTAAAGAGATaGATACCTATCATCATTAATACCTTTAGAGGAAAC | + |
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Preference number: 3 (lower is better) Translates to: KSLEQDHTLLKR*IPIIINTFRGN Trigger: GTTTCCTCTAAAGGTATTAATGATGATAGGTATGCATCTCTTTAACAAGGTATGATCCTGCTCCAGGCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR CCA 72 bp | ACAAAGGAACTCACACAATATGTACTCATTGATAAGTaGATAGTAGCCCAGAAACTTAGGATACCCAAGATA | + |
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Preference number: 3 (lower is better) Translates to: TKELTQYVLIDK*IVAQKLRIPKI Trigger: TATCTTGGGTATCCTAAGTTTCTGGGCTACTATCCACTTATCAATGAGTACATATTGTGTGAGTTCCTTTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR TCA 72 bp | GATACCCAAGATATAAGATACAATTTGCTAAACGCATaGAACTCAAGAAGAATGAAGACCAAAGTGTGGACA | + |
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Preference number: 3 (lower is better) Translates to: DTQDIRYNLLNA*NSRRMKTKVWT Trigger: TGTCCACACTTTGGTCTTCATTCTTCTTGAGTTTCATGCGTTTAGCAAATTGTATCTTATATCTTGGGTATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS-3UTR CCA 90 bp | GTAGAGGCCTGGCACCCAGAAGAGGGAATTGGTGCCCCTGGAACTGAGTTGCAATGCTCCTGTCAACAGTaGGGACTCTTCCACCAACAG | + |
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Preference number: 4 (lower is better) Translates to: VEAWHPEEGIGAPGTELQCSCQQ*GLFHQQ Trigger: CTGTTGGTGGAAGAGTCCCCACTGTTGACAGGAGCA...TTGCAACTCAGTTCCAGGGGCACCAATTCCCTCTTCTGGGTGCCAGGCCTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS-3UTR TCA 90 bp | GTAGAGGCCTGGCACCCAGAAGAGGGAATTGGTGCCCCTGGAACTGAGTTGCAATGCACATTGCTGATTTaGACCAAATGGTCCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: VEAWHPEEGIGAPGTELQCTLLI*TKWSLP Trigger: GGGCAGGGACCATTTGGTTCAAATCAGCAATGTGCA...TTGCAACTCAGTTCCAGGGGCACCAATTCCCTCTTCTGGGTGCCAGGCCTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS-3UTR GCA 90 bp | GTAGAGGCCTGGCACCCAGAAGAGGGAATTGGTGCCCCTGGAACTGAGTTGCAACAACACCAAGTATGCTaGACATATACCAATCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: VEAWHPEEGIGAPGTELQQHQVC*TYTNLP Trigger: GGGGAGATTGGTATATGTGCAGCATACTTGGTGTTG...TTGCAACTCAGTTCCAGGGGCACCAATTCCCTCTTCTGGGTGCCAGGCCTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| 3UTR CAA 72 bp | CACCCAGAAGAGGGAATTGGTGCCCCTGGAACTGAGTaGCAAACAATTGTGAGCCAGCATGTCAGACAGAAG | + |
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Preference number: 4 (lower is better) Translates to: HPEEGIGAPGTE*QTIVSQHVRQK Trigger: CTTCTGTCTGACATGCTGGCTCACAATTGTTTGCAACTCAGTTCCAGGGGCACCAATTCCCTCTTCTGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS-3UTR GCA 90 bp | GTAGAGGCCTGGCACCCAGAAGAGGGAATTGGTGCCCCTGGAACTGAGTTGCAAGAAATACTCAGGCTTTaGAATGAGAGCAGAGGTAAT | + |
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Preference number: 4 (lower is better) Translates to: VEAWHPEEGIGAPGTELQEILRL*NESRGN Trigger: ATTACCTCTGCTCTCATTGCAAAGCCTGAGTATTTC...TTGCAACTCAGTTCCAGGGGCACCAATTCCCTCTTCTGGGTGCCAGGCCTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS-3UTR TCA 90 bp | ATTTCCCCAGACTTCAGAGCCAGAATGAGAAAAGGACTCTGTGAAACTTGTATTCATATGGGTTGCCCCTaGCGAATCCCCTTCCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: ISPDFRARMRKGLCETCIHMGCP*RIPFRV Trigger: GACCCGGAAGGGGATTCGTCAGGGGCAACCCATATG...AATACAAGTTTCACAGAGTCCTTTTCTCATTCTGGCTCTGAAGTCTGGGGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS-3UTR GCA 90 bp | GTAGAGGCCTGGCACCCAGAAGAGGGAATTGGTGCCCCTGGAACTGAGTTGCAACAGTTAAAAGCAGTTTaGCAGAATTCAATGGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: VEAWHPEEGIGAPGTELQQLKAV*QNSMVK Trigger: CTTGACCATTGAATTCTGGCAAACTGCTTTTAACTG...TTGCAACTCAGTTCCAGGGGCACCAATTCCCTCTTCTGGGTGCCAGGCCTCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS-3UTR CCA 90 bp | TTGAAACTCAGACACTTTAGCACATATTCTTTCCTAGAAAAGCCTGGAGCAGGAAGTGCCAGAGTGATCTaGCGGGCCATGCAGGACCAG | + |
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Preference number: 4 (lower is better) Translates to: LKLRHFSTYSFLEKPGAGSARVI*RAMQDQ Trigger: CTGGTCCTGCATGGCCCGCCAGATCACTCTGGCACT...TCCTGCTCCAGGCTTTTCTAGGAAAGAATATGTGCTAAAGTGTCTGAGTTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS-3UTR TCA 90 bp | AACAGTTGTGCTGTCTTCATGCCTCTCCTGTTTTTCACTAGTCATGGCTGTACCCTTCTTGACATCTGCTaGGATGATCCAGGCCATGAG | + |
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Preference number: 4 (lower is better) Translates to: NSCAVFMPLLFFTSHGCTLLDIC*DDPGHE Trigger: CTCATGGCCTGGATCATCTCAGCAGATGTCAAGAAG...GGTACAGCCATGACTAGTGAAAAACAGGAGAGGCATGAAGACAGCACAACTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS-3UTR TCA 90 bp | AACAGTTGTGCTGTCTTCATGCCTCTCCTGTTTTTCACTAGTCATGGCTGTACCATGACCAGAGACATCTaGATGAGGAAGCTCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: NSCAVFMPLLFFTSHGCTMTRDI*MRKLSS Trigger: GGAGCTGAGCTTCCTCATTCAGATGTCTCTGGTCAT...GGTACAGCCATGACTAGTGAAAAACAGGAGAGGCATGAAGACAGCACAACTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS-3UTR GCA 90 bp | GAAACACAAAAATGCAGGTTGAGCAAGGGTGTCATGATAGGTGACATCCCTGCAGCTTCTCCTCTCCAGTaGAGAGCTGATCAGACATGT | + |
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Preference number: 4 (lower is better) Translates to: ETQKCRLSKGVMIGDIPAASPLQ*RADQTC Trigger: ACATGTCTGATCAGCTCTGCACTGGAGAGGAGAAGC...TGCAGGGATGTCACCTATCATGACACCCTTGCTCAACCTGCATTTTTGTGTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS-3UTR CCA 90 bp | GAAACACAAAAATGCAGGTTGAGCAAGGGTGTCATGATAGGTGACATCCCTGCAGGGATGATTCTGGAGTaGATAGGAAACAGTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: ETQKCRLSKGVMIGDIPAGMILE*IGNSPA Trigger: TGCAGGACTGTTTCCTATCCACTCCAGAATCATCCC...TGCAGGGATGTCACCTATCATGACACCCTTGCTCAACCTGCATTTTTGTGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS-3UTR CCA 90 bp | GAAACACAAAAATGCAGGTTGAGCAAGGGTGTCATGATAGGTGACATCCCTGCAAGCCCAGAGTATGGTTaGGCAAAATGTCCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETQKCRLSKGVMIGDIPASPEYG*AKCPSS Trigger: AGAGGAAGGACATTTTGCCCAACCATACTCTGGGCT...TGCAGGGATGTCACCTATCATGACACCCTTGCTCAACCTGCATTTTTGTGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR CCA 90 bp | GAAACACAAAAATGCAGGTTGAGCAAGGGTGTCATGATAGGTGACATCCCTGCAATTGGCTTTCACCAATaGAGTGTGTCTGTGGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: ETQKCRLSKGVMIGDIPAIGFHQ*SVSVDH Trigger: GTGATCCACAGACACACTCCATTGGTGAAAGCCAAT...TGCAGGGATGTCACCTATCATGACACCCTTGCTCAACCTGCATTTTTGTGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| 3UTR CAA 72 bp | TCAGCAGATGCTTCAGATGAAACACAAAAATGCAGGTaGAGCAAGGGTGTCATGATAGGTGACATCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SADASDETQKCR*SKGVMIGDIPA Trigger: TGCAGGGATGTCACCTATCATGACACCCTTGCTCAACCTGCATTTTTGTGTTTCATCTGAAGCATCTGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR GCA 90 bp | CAAACAGTTGTGCTGTCTTCATGCCTCTCCTGTTTTTCACTAGTCATGGCTGTACATCAGCACATGGGATaGAATCAAAGCAGCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: QTVVLSSCLSCFSLVMAVHQHMG*NQSSIW Trigger: CCATATGCTGCTTTGATTGCATCCCATGTGCTGATG...TACAGCCATGACTAGTGAAAAACAGGAGAGGCATGAAGACAGCACAACTGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR GCA 90 bp | TTGAAACTCAGACACTTTAGCACATATTCTTTCCTAGAAAAGCCTGGAGCAGGATGCCAAGAGGACAAGTaGCCCAAAGATGGACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LKLRHFSTYSFLEKPGAGCQEDK*PKDGQD Trigger: ATCCTGTCCATCTTTGGGGCACTTGTCCTCTTGGCA...TCCTGCTCCAGGCTTTTCTAGGAAAGAATATGTGCTAAAGTGTCTGAGTTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR CCA 90 bp | ATTTCCCCAGACTTCAGAGCCAGAATGAGAAAAGGACTCTGTGAAACTTGTATTTGCTCTTCTCTGCATTaGACCAGTCATCTTCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: ISPDFRARMRKGLCETCICSSLH*TSHLHR Trigger: GCGGTGAAGATGACTGGTCCAATGCAGAGAAGAGCA...AATACAAGTTTCACAGAGTCCTTTTCTCATTCTGGCTCTGAAGTCTGGGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTTGTGCTGTCTTCATGCCTCTCCTGTTTTTCACTAGTCATGGCTGTAGAATTCCACAAGCTTTaGCACACACTTGCTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QTVVLSSCLSCFSLVMAVEFHKL*HTLALL Trigger: GAGAAGAGCAAGTGTGTGCCAAAGCTTGTGGAATTC...TACAGCCATGACTAGTGAAAAACAGGAGAGGCATGAAGACAGCACAACTGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR CCA 90 bp | ATTTCCCCAGACTTCAGAGCCAGAATGAGAAAAGGACTCTGTGAAACTTGTATTGCAGGACCAGTTGCATaGCTTGCCTATGAACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ISPDFRARMRKGLCETCIAGPVA*LAYEQQ Trigger: TTGCTGTTCATAGGCAAGCCATGCAACTGGTCCTGC...AATACAAGTTTCACAGAGTCCTTTTCTCATTCTGGCTCTGAAGTCTGGGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| 3UTR CAA 72 bp | AAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTaGCTAGTGTATGCAATGGTGTCAGGGTTTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KRQLYLGPFSKI*LVYAMVSGFGS Trigger: GCTTCCAAACCCTGACACCATTGCATACACTAGCAAGATTTTGCTGAAAGGACCCAGATATAGCTGTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR TCA 90 bp | ATTTCCCCAGACTTCAGAGCCAGAATGAGAAAAGGACTCTGTGAAACTTGTATTTCCTCTGTTTTGTTTTaGGCACCCAATACAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISPDFRARMRKGLCETCISSVLF*APNTAH Trigger: GTGGGCTGTATTGGGTGCTCAAAACAAAACAGAGGA...AATACAAGTTTCACAGAGTCCTTTTCTCATTCTGGCTCTGAAGTCTGGGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR GCA 90 bp | CAAACAGTTGTGCTGTCTTCATGCCTCTCCTGTTTTTCACTAGTCATGGCTGTAATAATCATCATCAGCTaGAATAGCACCTACCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QTVVLSSCLSCFSLVMAVIIIIS*NSTYPD Trigger: GTCTGGGTAGGTGCTATTGCAGCTGATGATGATTAT...TACAGCCATGACTAGTGAAAAACAGGAGAGGCATGAAGACAGCACAACTGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR GCA 90 bp | AACAGTTGTGCTGTCTTCATGCCTCTCCTGTTTTTCACTAGTCATGGCTGTACCAACACTTCTTGGTGTTaGAAATCCAATAGTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: NSCAVFMPLLFFTSHGCTNTSWC*KSNSST Trigger: GGTGGAACTATTGGATTTGCAACACCAAGAAGTGTT...GGTACAGCCATGACTAGTGAAAAACAGGAGAGGCATGAAGACAGCACAACTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR GCA 90 bp | TTGAAACTCAGACACTTTAGCACATATTCTTTCCTAGAAAAGCCTGGAGCAGGAGAGGACACACTTGTGTaGAAAATGAATCTGGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKLRHFSTYSFLEKPGAGEDTLV*KMNLDA Trigger: GGCGTCCAGATTCATTTTGCACACAAGTGTGTCCTC...TCCTGCTCCAGGCTTTTCTAGGAAAGAATATGTGCTAAAGTGTCTGAGTTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR GCA 90 bp | AACAGTTGTGCTGTCTTCATGCCTCTCCTGTTTTTCACTAGTCATGGCTGTACCTTTCGAAAAATGGGGTaGATGGATATAAGACGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NSCAVFMPLLFFTSHGCTFRKMG*MDIRRV Trigger: AACCCGTCTTATATCCATGCACCCCATTTTTCGAAA...GGTACAGCCATGACTAGTGAAAAACAGGAGAGGCATGAAGACAGCACAACTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR CCA 90 bp | GAAACACAAAAATGCAGGTTGAGCAAGGGTGTCATGATAGGTGACATCCCTGCACCATTGCTTTGGAGATaGTATAGCAGGAATCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ETQKCRLSKGVMIGDIPAPLLWR*YSRNQR Trigger: TCTTTGATTCCTGCTATACCATCTCCAAAGCAATGG...TGCAGGGATGTCACCTATCATGACACCCTTGCTCAACCTGCATTTTTGTGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR CCA 90 bp | GAAACACAAAAATGCAGGTTGAGCAAGGGTGTCATGATAGGTGACATCCCTGCATCTGCATTTTCTCATTaGAGTAGACTTTGGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: ETQKCRLSKGVMIGDIPASAFSH*SRLWEW Trigger: CCATTCCCAAAGTCTACTCCAATGAGAAAATGCAGA...TGCAGGGATGTCACCTATCATGACACCCTTGCTCAACCTGCATTTTTGTGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR CCA 90 bp | ATTTCCCCAGACTTCAGAGCCAGAATGAGAAAAGGACTCTGTGAAACTTGTATTAATCAAAGCAGCATATaGGTTGCCCCTGACGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: ISPDFRARMRKGLCETCINQSSI*VAPDES Trigger: GGATTCGTCAGGGGCAACCCATATGCTGCTTTGATT...AATACAAGTTTCACAGAGTCCTTTTCTCATTCTGGCTCTGAAGTCTGGGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTTGTGCTGTCTTCATGCCTCTCCTGTTTTTCACTAGTCATGGCTGTAATGACTCCATTGCTTTaGAGATGGTATAGCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QTVVLSSCLSCFSLVMAVMTPLL*RWYSRN Trigger: ATTCCTGCTATACCATCTCCAAAGCAATGGAGTCAT...TACAGCCATGACTAGTGAAAAACAGGAGAGGCATGAAGACAGCACAACTGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTTGTGCTGTCTTCATGCCTCTCCTGTTTTTCACTAGTCATGGCTGTAAATGGAGTGTGTCTGTaGATCACATACACAACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QTVVLSSCLSCFSLVMAVNGVCL*ITYTTV Trigger: AACTGTTGTGTATGTGATCCACAGACACACTCCATT...TACAGCCATGACTAGTGAAAAACAGGAGAGGCATGAAGACAGCACAACTGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR GCA 90 bp | TTGAAACTCAGACACTTTAGCACATATTCTTTCCTAGAAAAGCCTGGAGCAGGAAGTGGAAGTCTTTACTaGCTTAACAGCCTTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKLRHFSTYSFLEKPGAGSGSLY*LNSLLH Trigger: ATGCAGAAGGCTGTTAAGGCAGTAAAGACTTCCACT...TCCTGCTCCAGGCTTTTCTAGGAAAGAATATGTGCTAAAGTGTCTGAGTTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR GCA 90 bp | ATTTCCCCAGACTTCAGAGCCAGAATGAGAAAAGGACTCTGTGAAACTTGTATTCTCCAACACCAAGTATaGTGCACATATACCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISPDFRARMRKGLCETCILQHQV*CTYTNL Trigger: GAGATTGGTATATGTGCAGCATACTTGGTGTTGGAG...AATACAAGTTTCACAGAGTCCTTTTCTCATTCTGGCTCTGAAGTCTGGGGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR CCA 90 bp | GAAACACAAAAATGCAGGTTGAGCAAGGGTGTCATGATAGGTGACATCCCTGCACAAGTGAATGATTTTTaGCATCTACATATCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ETQKCRLSKGVMIGDIPAQVNDF*HLHIQT Trigger: TGTCTGGATATGTAGATGCCAAAAATCATTCACTTG...TGCAGGGATGTCACCTATCATGACACCCTTGCTCAACCTGCATTTTTGTGTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR CCA 90 bp | TTGAAACTCAGACACTTTAGCACATATTCTTTCCTAGAAAAGCCTGGAGCAGGAACTGGAGGTTATCACTaGGTAGTACACGAAGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKLRHFSTYSFLEKPGAGTGGYH*VVHEDK Trigger: CTTATCTTCGTGTACTACCCAGTGATAACCTCCAGT...TCCTGCTCCAGGCTTTTCTAGGAAAGAATATGTGCTAAAGTGTCTGAGTTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR CCA 90 bp | ATTTCCCCAGACTTCAGAGCCAGAATGAGAAAAGGACTCTGTGAAACTTGTATTATATCCATCAGCACATaGGATGCAATCAAAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISPDFRARMRKGLCETCIISIST*DAIKAA Trigger: TGCTGCTTTGATTGCATCCCATGTGCTGATGGATAT...AATACAAGTTTCACAGAGTCCTTTTCTCATTCTGGCTCTGAAGTCTGGGGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR CCA 90 bp | ATTTCCCCAGACTTCAGAGCCAGAATGAGAAAAGGACTCTGTGAAACTTGTATTTTCATAATAGTTATCTaGCAGCTGGCGAGCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: ISPDFRARMRKGLCETCIFIIVI*QLASHK Trigger: TTTGTGGCTCGCCAGCTGCCAGATAACTATTATGAA...AATACAAGTTTCACAGAGTCCTTTTCTCATTCTGGCTCTGAAGTCTGGGGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR TCA 90 bp | ATTTCCCCAGACTTCAGAGCCAGAATGAGAAAAGGACTCTGTGAAACTTGTATTAAGAAACACCAAAGATaGCTCCATTGCTTTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISPDFRARMRKGLCETCIKKHQR*LHCFGD Trigger: ATCTCCAAAGCAATGGAGTCATCTTTGGTGTTTCTT...AATACAAGTTTCACAGAGTCCTTTTCTCATTCTGGCTCTGAAGTCTGGGGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR TCA 90 bp | ATTTCCCCAGACTTCAGAGCCAGAATGAGAAAAGGACTCTGTGAAACTTGTATTATATATGCACATTGCTaGTTTGAACCAAATGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ISPDFRARMRKGLCETCIIYAHC*FEPNGP Trigger: GGGACCATTTGGTTCAAATCAGCAATGTGCATATAT...AATACAAGTTTCACAGAGTCCTTTTCTCATTCTGGCTCTGAAGTCTGGGGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR GCA 90 bp | ATTTCCCCAGACTTCAGAGCCAGAATGAGAAAAGGACTCTGTGAAACTTGTATTACTTGGCCATCAATCTaGATTGTACTTCCTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISPDFRARMRKGLCETCITWPSI*IVLPLF Trigger: AAACAGAGGAAGTACAATGCAGATTGATGGCCAAGT...AATACAAGTTTCACAGAGTCCTTTTCTCATTCTGGCTCTGAAGTCTGGGGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR GCA 90 bp | TTGAAACTCAGACACTTTAGCACATATTCTTTCCTAGAAAAGCCTGGAGCAGGAGGTTTGAATTCTTCCTaGCCAGTAAGAAACACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKLRHFSTYSFLEKPGAGGLNSS*PVRNTK Trigger: TTTGGTGTTTCTTACTGGGCAGGAAGAATTCAAACC...TCCTGCTCCAGGCTTTTCTAGGAAAGAATATGTGCTAAAGTGTCTGAGTTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR CCA 90 bp | CAAACAGTTGTGCTGTCTTCATGCCTCTCCTGTTTTTCACTAGTCATGGCTGTATTTGCCAGAATTCAATaGTCAAGACATCATTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QTVVLSSCLSCFSLVMAVFARIQ*SRHHLD Trigger: ATCCAAATGATGTCTTGACCATTGAATTCTGGCAAA...TACAGCCATGACTAGTGAAAAACAGGAGAGGCATGAAGACAGCACAACTGTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| 3UTR CAA 72 bp | GTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTaGGTCTTCAATCTTCTTGAGTTTCATGTGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: VPNSKKGQSVHT*VFNLLEFHVKM Trigger: CATTTTCACATGAAACTCAAGAAGATTGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR CCA 90 bp | ATTTCCCCAGACTTCAGAGCCAGAATGAGAAAAGGACTCTGTGAAACTTGTATTATCTCCTTAATGGTGTaGATCATGGTTTTCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ISPDFRARMRKGLCETCIISLMV*IMVFIH Trigger: ATGGATGAAAACCATGATCCACACCATTAAGGAGAT...AATACAAGTTTCACAGAGTCCTTTTCTCATTCTGGCTCTGAAGTCTGGGGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR CCA 90 bp | ATTTCCCCAGACTTCAGAGCCAGAATGAGAAAAGGACTCTGTGAAACTTGTATTTGGTATAACACTTCTTaGTGTTGCAAATCCAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISPDFRARMRKGLCETCIWYNTS*CCKSNS Trigger: ACTATTGGATTTGCAACACCAAGAAGTGTTATACCA...AATACAAGTTTCACAGAGTCCTTTTCTCATTCTGGCTCTGAAGTCTGGGGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS-3UTR CAA 90 bp | GTAGAGGCCTGGCACCCAGAAGAGGGAATTGGTGCCCCTGGAACTGAGTTGCAAAAAGCAGCATATGGGTaGCCCCTGACGAATCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VEAWHPEEGIGAPGTELQKAAYG*PLTNPL Trigger: AAGGGGATTCGTCAGGGGCAACCCATATGCTGCTTT...TTGCAACTCAGTTCCAGGGGCACCAATTCCCTCTTCTGGGTGCCAGGCCTCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS CCA 90 bp | AGAATGGAAGACAGACAAAGGCAAAAGCCGAGTGCCAGAGTGATCTaGCGGGCCATGCAGGACCAGTTGCATGGCTTGCCTATGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RMEDRQRQKPSARVI*RAMQDQLHGLPMNS Trigger: GCTGTTCATAGGCAAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCACTCTGGCACTCGGCTTTTGCCTTTGTCTGTCTTCCATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS GCA 90 bp | CCCTCTGTCCTGGTTTCTCTGACACATATCCATCAGCACATGGGATaGAATCAAAGCAGCATATGGGTTGCCCCTGACGAATCCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSVLVSLTHIHQHMG*NQSSIWVAPDESPS Trigger: GGAAGGGGATTCGTCAGGGGCAACCCATATGCTGCTTTGATTGCATCCCATGTGCTGATGGATATGTGTCAGAGAAACCAGGACAGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS GCA 90 bp | GTGTCTGTGGATCACATACACAACAGTTACTGCCAAGAGGACAAGTaGCCCAAAGATGGACAGGATGACAAGAGTGAACCCCAGTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VSVDHIHNSYCQEDK*PKDGQDDKSEPQCL Trigger: GAGGCACTGGGGTTCACTCTTGTCATCCTGTCCATCTTTGGGGCACTTGTCCTCTTGGCAGTAACTGTTGTGTATGTGATCCACAGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS GCA 90 bp | AATAGTCTTTCCAAGAATGGAAGACAGACAAAGGCAAAAGCCGAGTaGCAGAGTGATCTGGCGGGCCATGCAGGACCAGTTGCATGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NSLSKNGRQTKAKAE*QSDLAGHAGPVAWL Trigger: AAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCACTCTGGCACTCGGCTTTTGCCTTTGTCTGTCTTCCATTCTTGGAAAGACTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS CCA 90 bp | CGAGGAATTCCACAAGCTTTGGCACACACTTGCTCTTCTCTGCATTaGACCAGTCATCTTCACCGCATGGATCACATTCCCTCTGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGIPQALAHTCSSLH*TSHLHRMDHIPSVL Trigger: CAGGACAGAGGGAATGTGATCCATGCGGTGAAGATGACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCTTGTGGAATTCCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS CCA 90 bp | AAGCTCAGCTCCCGGTCATTGGCTTTCACCAATGGAGTGTGTCTGTaGATCACATACACAACAGTTACTGCCAAGAGGACAAGTGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KLSSRSLAFTNGVCL*ITYTTVTAKRTSAP Trigger: TGGGGCACTTGTCCTCTTGGCAGTAACTGTTGTGTATGTGATCCACAGACACACTCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS TCA 90 bp | CCTATGAACAGCAAGGAAGACAGCACAGTGATGACCAGAGACATCTaGATGAGGAAGCTCAGCTCCCGGTCATTGGCTTTCACCAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: PMNSKEDSTVMTRDI*MRKLSSRSLAFTNG Trigger: TCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTTCCTCATTCAGATGTCTCTGGTCATCACTGTGCTGTCTTCCTTGCTGTTCATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS GCA 90 bp | GTGCCTCTTCATAAGCGAGGAATTCCACAAGCTTTGGCACACACTTaGTCTTCTCTGCATTGGACCAGTCATCTTCACCGCATGGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: VPLHKRGIPQALAHT*SSLHWTSHLHRMDH Trigger: GTGATCCATGCGGTGAAGATGACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCTTGTGGAATTCCTCGCTTATGAAGAGGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS GCA 90 bp | GACAAGTGCCCCAAAGATGGACAGGATGACAAGAGTGAACCCCAGTaGCTCTTCATAAGCGAGGAATTCCACAAGCTTTGGCACACACTT | + |
|
Preference number: 5 (lower is better) Translates to: DKCPKDGQDDKSEPQ*LFISEEFHKLWHTL Trigger: AAGTGTGTGCCAAAGCTTGTGGAATTCCTCGCTTATGAAGAGGCACTGGGGTTCACTCTTGTCATCCTGTCCATCTTTGGGGCACTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS CCA 90 bp | AGTGAACCCCAGTGCCTCTTCATAAGCGAGGAATTCCACAAGCTTTaGCACACACTTGCTCTTCTCTGCATTGGACCAGTCATCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: SEPQCLFISEEFHKL*HTLALLCIGPVIFT Trigger: GGTGAAGATGACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCTTGTGGAATTCCTCGCTTATGAAGAGGCACTGGGGTTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS GCA 90 bp | ATAAGCGAGGAATTCCACAAGCTTTGGCACACACTTGCTCTTCTCTaGATTGGACCAGTCATCTTCACCGCATGGATCACATTCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ISEEFHKLWHTLALL*IGPVIFTAWITFPL Trigger: CAGAGGGAATGTGATCCATGCGGTGAAGATGACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCTTGTGGAATTCCTCGCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
||
| CDS CCA 90 bp | CATCTGAATGAGGAAGCTCAGCTCCCGGTCATTGGCTTTCACCAATaGAGTGTGTCTGTGGATCACATACACAACAGTTACTGCCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HLNEEAQLPVIGFHQ*SVSVDHIHNSYCQE Trigger: CTCTTGGCAGTAACTGTTGTGTATGTGATCCACAGACACACTCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTTCCTCATTCAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS-3UTR CAA 90 bp | CAAACAGTTGTGCTGTCTTCATGCCTCTCCTGTTTTTCACTAGTCATGGCTGTATGGTCCCTGCCCTTCTaGACATCTGCTGAGATGATC | + |
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Preference number: 5 (lower is better) Translates to: QTVVLSSCLSCFSLVMAVWSLPF*TSAEMI Trigger: GATCATCTCAGCAGATGTCAAGAAGGGCAGGGACCA...TACAGCCATGACTAGTGAAAAACAGGAGAGGCATGAAGACAGCACAACTGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS TCA 90 bp | TTTCATCCATCGGAAACCCCGGAAATTAAACCCTTCACACATGGGTaGTACCGGCTCCAAAATAGCTTCATCTACTGGGATGATTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: FHPSETPEIKPFTHG*YRLQNSFIYWDDSG Trigger: TCCAGAATCATCCCAGTAGATGAAGCTATTTTGGAGCCGGTATCACCCATGTGTGAAGGGTTTAATTTCCGGGGTTTCCGATGGATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS CCA 90 bp | GACCAGCATCCCAAAAGTGATACATTTCCCTTCATAATAGTTATCTaGCAGCTGGCGAGCCACAAAGGTTGTAAGAAAACACAGCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: DQHPKSDTFPFIIVI*QLASHKGCKKTQQS Trigger: GCTCTGCTGTGTTTTCTTACAACCTTTGTGGCTCGCCAGCTGCCAGATAACTATTATGAAGGGAAATGTATCACTTTTGGGATGCTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS-3UTR CAA 90 bp | AACAGTTGTGCTGTCTTCATGCCTCTCCTGTTTTTCACTAGTCATGGCTGTACCTTCCTCTGTTTTGTTTaGAGCACCCAATACAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: NSCAVFMPLLFFTSHGCTFLCFV*STQYSP Trigger: TGGGCTGTATTGGGTGCTCAAAACAAAACAGAGGAA...GGTACAGCCATGACTAGTGAAAAACAGGAGAGGCATGAAGACAGCACAACTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS-3UTR CAA 90 bp | CAAACAGTTGTGCTGTCTTCATGCCTCTCCTGTTTTTCACTAGTCATGGCTGTAATGCACATTGCTGATTaGAACCAAATGGTCCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: QTVVLSSCLSCFSLVMAVMHIAD*NQMVPA Trigger: GGCAGGGACCATTTGGTTCAAATCAGCAATGTGCAT...TACAGCCATGACTAGTGAAAAACAGGAGAGGCATGAAGACAGCACAACTGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS GCA 90 bp | GTCAGAAGTATAAAGCACAATGACTTTGGCAGTGGAAGTCTTTACTaGCTTAACAGCCTTCTGCATTTTCTCATTGGAGTAGACTTTGGG | + |
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Preference number: 5 (lower is better) Translates to: VRSIKHNDFGSGSLY*LNSLLHFLIGVDFG Trigger: CCCAAAGTCTACTCCAATGAGAAAATGCAGAAGGCTGTTAAGGCAGTAAAGACTTCCACTGCCAAAGTCATTGTGCTTTATACTTCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS-3UTR CAA 90 bp | GAAACACAAAAATGCAGGTTGAGCAAGGGTGTCATGATAGGTGACATCCCTGCAGTGCTATTTCTAAAATaGGGTTTGAATTCTTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: ETQKCRLSKGVMIGDIPAVLFLK*GLNSSC Trigger: GCAGGAAGAATTCAAACCCAATTTTAGAAATAGCAC...TGCAGGGATGTCACCTATCATGACACCCTTGCTCAACCTGCATTTTTGTGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS-3UTR CAA 90 bp | ATTTCCCCAGACTTCAGAGCCAGAATGAGAAAAGGACTCTGTGAAACTTGTATTATGAATCTGGACGCCTaGATGACTCAGTGTTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: ISPDFRARMRKGLCETCIMNLDA*MTQCSK Trigger: TTTGGAACACTGAGTCATCAAGGCGTCCAGATTCAT...AATACAAGTTTCACAGAGTCCTTTTCTCATTCTGGCTCTGAAGTCTGGGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS-3UTR CAA 90 bp | TTGAAACTCAGACACTTTAGCACATATTCTTTCCTAGAAAAGCCTGGAGCAGGAGGCCATCAATCTGCATaGTACTTCCTCTGTTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LKLRHFSTYSFLEKPGAGGHQSA*YFLCFV Trigger: AACAAAACAGAGGAAGTACAATGCAGATTGATGGCC...TCCTGCTCCAGGCTTTTCTAGGAAAGAATATGTGCTAAAGTGTCTGAGTTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS-3UTR CAA 90 bp | TTGAAACTCAGACACTTTAGCACATATTCTTTCCTAGAAAAGCCTGGAGCAGGACCAGACAAATTAAACTaGGCCATCAATCTGCATTGT | + |
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Preference number: 5 (lower is better) Translates to: LKLRHFSTYSFLEKPGAGPDKLN*AINLHC Trigger: ACAATGCAGATTGATGGCCAAGTTTAATTTGTCTGG...TCCTGCTCCAGGCTTTTCTAGGAAAGAATATGTGCTAAAGTGTCTGAGTTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS TCA 90 bp | TGGGATGATTCTGGAGTGGATAGGAAACAGTCCTGCAATAACAAGTaGATGATTTTTGGCATCTACATATCCAGACAAATTAAACTTGGC | + |
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Preference number: 5 (lower is better) Translates to: WDDSGVDRKQSCNNK*MIFGIYISRQIKLG Trigger: GCCAAGTTTAATTTGTCTGGATATGTAGATGCCAAAAATCATTCACTTGTTATTGCAGGACTGTTTCCTATCCACTCCAGAATCATCCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS GCA 90 bp | TTCCTTAAAAGTTTTTACTCCATATTTCCCATAATCATCATCAGCTaGAATAGCACCTACCCAGACCCAACCGAAGTGTTTGATGAGATT | + |
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Preference number: 5 (lower is better) Translates to: FLKSFYSIFPIIIIS*NSTYPDPTEVFDEI Trigger: AATCTCATCAAACACTTCGGTTGGGTCTGGGTAGGTGCTATTGCAGCTGATGATGATTATGGGAAATATGGAGTAAAAACTTTTAAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS CAA 90 bp | AGTGCCAGAGTGATCTGGCGGGCCATGCAGGACCAGTTGCATGGCTaGCCTATGAACAGCAAGGAAGACAGCACAGTGATGACCAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: SARVIWRAMQDQLHG*PMNSKEDSTVMTRD Trigger: GTCTCTGGTCATCACTGTGCTGTCTTCCTTGCTGTTCATAGGCAAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCACTCTGGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS CAA 90 bp | CAAAAGCCGAGTGCCAGAGTGATCTGGCGGGCCATGCAGGACCAGTaGCATGGCTTGCCTATGAACAGCAAGGAAGACAGCACAGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: QKPSARVIWRAMQDQ*HGLPMNSKEDSTVM Trigger: CATCACTGTGCTGTCTTCCTTGCTGTTCATAGGCAAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCACTCTGGCACTCGGCTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS CAA 72 bp | GTGATCTGGCGGGCCATGCAGGACCAGTTGCATGGCTaGCCTATGAACAGCAAGGAAGACAGCACAGTGATG | + |
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Preference number: 6 (lower is better) Translates to: VIWRAMQDQLHG*PMNSKEDSTVM Trigger: CATCACTGTGCTGTCTTCCTTGCTGTTCATAGGCAAGCCATGCAACTGGTCCTGCATGGCCCGCCAGATCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS GCA 72 bp | GAATCCCCTTCCGGGTCCCTGGAGGACACACTTGTGTaGAAAATGAATCTGGACGCCTTGATGACTCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: ESPSGSLEDTLV*KMNLDALMTQC Trigger: ACACTGAGTCATCAAGGCGTCCAGATTCATTTTGCACACAAGTGTGTCCTCCAGGGACCCGGAAGGGGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS CAA 90 bp | GCGAGGAATTCCACAAGCTTTGGCACACACTTGCTCTTCTCTGCATaGGACCAGTCATCTTCACCGCATGGATCACATTCCCTCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: ARNSTSFGTHLLFSA*DQSSSPHGSHSLCP Trigger: AGGACAGAGGGAATGTGATCCATGCGGTGAAGATGACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCTTGTGGAATTCCTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS TCA 72 bp | AGCAAGGAAGACAGCACAGTGATGACCAGAGACATCTaGATGAGGAAGCTCAGCTCCCGGTCATTGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SKEDSTVMTRDI*MRKLSSRSLAF Trigger: GAAAGCCAATGACCGGGAGCTGAGCTTCCTCATTCAGATGTCTCTGGTCATCACTGTGCTGTCTTCCTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS GCA 72 bp | CCCAAAGATGGACAGGATGACAAGAGTGAACCCCAGTaGCTCTTCATAAGCGAGGAATTCCACAAGCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: PKDGQDDKSEPQ*LFISEEFHKLW Trigger: CCAAAGCTTGTGGAATTCCTCGCTTATGAAGAGGCACTGGGGTTCACTCTTGTCATCCTGTCCATCTTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS CCA 72 bp | CAGTGCCTCTTCATAAGCGAGGAATTCCACAAGCTTTaGCACACACTTGCTCTTCTCTGCATTGGACCAGTC | + |
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Preference number: 6 (lower is better) Translates to: QCLFISEEFHKL*HTLALLCIGPV Trigger: GACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCTTGTGGAATTCCTCGCTTATGAAGAGGCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS CCA 72 bp | GAGGAAGCTCAGCTCCCGGTCATTGGCTTTCACCAATaGAGTGTGTCTGTGGATCACATACACAACAGTTAC | + |
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Preference number: 6 (lower is better) Translates to: EEAQLPVIGFHQ*SVSVDHIHNSY Trigger: GTAACTGTTGTGTATGTGATCCACAGACACACTCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS CAA 72 bp | GCTGCAATAGCACCTACCCAGACCCAACCGAAGTGTTaGATGAGATTCACTATGGCCTCAGACTGGAGGTTA | + |
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Preference number: 6 (lower is better) Translates to: AAIAPTQTQPKC*MRFTMASDWRL Trigger: TAACCTCCAGTCTGAGGCCATAGTGAATCTCATCAAACACTTCGGTTGGGTCTGGGTAGGTGCTATTGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS GCA 72 bp | CTGGTTTCTCTGACACATATCCATCAGCACATGGGATaGAATCAAAGCAGCATATGGGTTGCCCCTGACGAA | + |
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Preference number: 6 (lower is better) Translates to: LVSLTHIHQHMG*NQSSIWVAPDE Trigger: TTCGTCAGGGGCAACCCATATGCTGCTTTGATTGCATCCCATGTGCTGATGGATATGTGTCAGAGAAACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS GCA 72 bp | GAATTCCACAAGCTTTGGCACACACTTGCTCTTCTCTaGATTGGACCAGTCATCTTCACCGCATGGATCACA | + |
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Preference number: 6 (lower is better) Translates to: EFHKLWHTLALL*IGPVIFTAWIT Trigger: TGTGATCCATGCGGTGAAGATGACTGGTCCAATGCAGAGAAGAGCAAGTGTGTGCCAAAGCTTGTGGAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS GCA 72 bp | GATCACATACACAACAGTTACTGCCAAGAGGACAAGTaGCCCAAAGATGGACAGGATGACAAGAGTGAACCC | + |
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Preference number: 6 (lower is better) Translates to: DHIHNSYCQEDK*PKDGQDDKSEP Trigger: GGGTTCACTCTTGTCATCCTGTCCATCTTTGGGGCACTTGTCCTCTTGGCAGTAACTGTTGTGTATGTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS GCA 72 bp | CTTGAACATCCTTGGAGGCTCCAACACCAAGTATGCTaGACATATACCAATCTCCCCTACAACGCAGATCAG | + |
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Preference number: 6 (lower is better) Translates to: LEHPWRLQHQVC*TYTNLPYNADQ Trigger: CTGATCTGCGTTGTAGGGGAGATTGGTATATGTGCAGCATACTTGGTGTTGGAGCCTCCAAGGATGTTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS CCA 72 bp | TCCCGGTCATTGGCTTTCACCAATGGAGTGTGTCTGTaGATCACATACACAACAGTTACTGCCAAGAGGACA | + |
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Preference number: 6 (lower is better) Translates to: SRSLAFTNGVCL*ITYTTVTAKRT Trigger: TGTCCTCTTGGCAGTAACTGTTGTGTATGTGATCCACAGACACACTCCATTGGTGAAAGCCAATGACCGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS TCA 72 bp | TCGGAAACCCCGGAAATTAAACCCTTCACACATGGGTaGTACCGGCTCCAAAATAGCTTCATCTACTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: SETPEIKPFTHG*YRLQNSFIYWD Trigger: ATCCCAGTAGATGAAGCTATTTTGGAGCCGGTATCACCCATGTGTGAAGGGTTTAATTTCCGGGGTTTCCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS TCA 72 bp | TTCAGATCTTCCAGCTTCTCCTCTCCAGTGCAGAGCTaGTCAGACATGTCATACAGTCTGTCTTCTTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: FRSSSFSSPVQS*SDMSYSLSSFP Trigger: TGGGAAAGAAGACAGACTGTATGACATGTCTGATCAGCTCTGCACTGGAGAGGAGAAGCTGGAAGATCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS GCA 72 bp | GTTCTTGAACATCCTTGGAGGCTCCAACACCAAGTATaGTGCACATATACCAATCTCCCCTACAACGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: VLEHPWRLQHQV*CTYTNLPYNAD Trigger: ATCTGCGTTGTAGGGGAGATTGGTATATGTGCAGCATACTTGGTGTTGGAGCCTCCAAGGATGTTCAAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS GCA 72 bp | AGGTGTTTTTCAGATCTTCCAGCTTCTCCTCTCCAGTaGAGAGCTGATCAGACATGTCATACAGTCTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RCFSDLPASPLQ*RADQTCHTVCL Trigger: AAGACAGACTGTATGACATGTCTGATCAGCTCTGCACTGGAGAGGAGAAGCTGGAAGATCTGAAAAACACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS GCA 72 bp | ACACTGCTGTTGGGCCAGGTACAGTTAAAAGCAGTTTaGCAGAATTCAATGGTCAAGACATCATTTGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: TLLLGQVQLKAV*QNSMVKTSFGS Trigger: GGATCCAAATGATGTCTTGACCATTGAATTCTGGCAAACTGCTTTTAACTGTACCTGGCCCAACAGCAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS CAA 90 bp | GATCCAACCAGTGCTGCTAGAGTTGATCCAGTGCTATTTCTAAAATaGGGTTTGAATTCTTCCTGCCCAGTAAGAAACACCAAAGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: DPTSAARVDPVLFLK*GLNSSCPVRNTKDD Trigger: GTCATCTTTGGTGTTTCTTACTGGGCAGGAAGAATTCAAACCCAATTTTAGAAATAGCACTGGATCAACTCTAGCAGCACTGGTTGGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS CAA 90 bp | GTTATAAGGAACACTGCTGTTGGGCCAGGTACAGTTAAAAGCAGTTaGCCAGAATTCAATGGTCAAGACATCATTTGGATCCTTGTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: VIRNTAVGPGTVKSS*PEFNGQDIIWILVR Trigger: CCTAACAAGGATCCAAATGATGTCTTGACCATTGAATTCTGGCAAACTGCTTTTAACTGTACCTGGCCCAACAGCAGTGTTCCTTATAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS CCA 72 bp | CCCAAAAGTGATACATTTCCCTTCATAATAGTTATCTaGCAGCTGGCGAGCCACAAAGGTTGTAAGAAAACA | + |
|
Preference number: 6 (lower is better) Translates to: PKSDTFPFIIVI*QLASHKGCKKT Trigger: TGTTTTCTTACAACCTTTGTGGCTCGCCAGCTGCCAGATAACTATTATGAAGGGAAATGTATCACTTTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS GCA 72 bp | ATAAAGCACAATGACTTTGGCAGTGGAAGTCTTTACTaGCTTAACAGCCTTCTGCATTTTCTCATTGGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: IKHNDFGSGSLY*LNSLLHFLIGV Trigger: TACTCCAATGAGAAAATGCAGAAGGCTGTTAAGGCAGTAAAGACTTCCACTGCCAAAGTCATTGTGCTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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| CDS CAA 72 bp | ATATCCAGACAAATTAAACTTGGCCATCAATCTGCATaGTACTTCCTCTGTTTTGTTTTGAGCACCCAATAC | + |
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Preference number: 6 (lower is better) Translates to: ISRQIKLGHQSA*YFLCFVLSTQY Trigger: GTATTGGGTGCTCAAAACAAAACAGAGGAAGTACAATGCAGATTGATGGCCAAGTTTAATTTGTCTGGATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029406.6 |
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