Pregenerated sensors for VMN1R94 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094011

Ensembl transcript IDs: ENSMUST00000164526.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AACCAGTCAAGACTGGAGAGAAATTATGGACAAACAGAAAGACATTaGCCAAGGTACCAACCCCAAACTGGCAAAGCAAGAGGAGCTGAA	+
Preference number: 5 (lower is better) Translates to: NQSRLERNYGQTERH*PRYQPQTGKARGAE Trigger: TTCAGCTCCTCTTGCTTTGCCAGTTTGGGGTTGGTACCTTGGCCAATGTCTTTCTGTTTGTCCATAATTTCTCTCCAGTCTTGACTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164526.2
CDS CCA 90 bp	TGTCTGGGTCTCTGTTTAGAACCAGTCAAGACTGGAGAGAAATTATaGACAAACAGAAAGACATTGGCCAAGGTACCAACCCCAAACTGG	+
Preference number: 5 (lower is better) Translates to: CLGLCLEPVKTGEKL*TNRKTLAKVPTPNW Trigger: CCAGTTTGGGGTTGGTACCTTGGCCAATGTCTTTCTGTTTGTCCATAATTTCTCTCCAGTCTTGACTGGTTCTAAACAGAGACCCAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164526.2
CDS TCA 72 bp	TGGGTTGCTCTTGTCTCAGCTTGGCCTCTGGCGTCCTaGTTGGGAGTGAGGATGTGCTGCATTCGCTGGCGA	+
Preference number: 6 (lower is better) Translates to: WVALVSAWPLAS*LGVRMCCIRWR Trigger: TCGCCAGCGAATGCAGCACATCCTCACTCCCAATCAGGACGCCAGAGGCCAAGCTGAGACAAGAGCAACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164526.2
CDS CCA 72 bp	AAGCTAACAAATATGACCACCAGCATCAGGATAGTATaGGTTGCTCTTGTCTCAGCTTGGCCTCTGGCGTCC	+
Preference number: 6 (lower is better) Translates to: KLTNMTTSIRIV*VALVSAWPLAS Trigger: GGACGCCAGAGGCCAAGCTGAGACAAGAGCAACCCATACTATCCTGATGCTGGTGGTCATATTTGTTAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164526.2
CDS TCA 72 bp	AAGGTACCAACCCCAAACTGGCAAAGCAAGAGGAGCTaGAGAGCCACTTCCTCAGTGGTTTTCACGGATTTA	+
Preference number: 6 (lower is better) Translates to: KVPTPNWQSKRS*RATSSVVFTDL Trigger: TAAATCCGTGAAAACCACTGAGGAAGTGGCTCTTCAGCTCCTCTTGCTTTGCCAGTTTGGGGTTGGTACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164526.2
CDS GCA 72 bp	AACAAATATGACCACCAGCATCAGGATAGTATGGGTTaGTCTTGTCTCAGCTTGGCCTCTGGCGTCCTGATT	+
Preference number: 6 (lower is better) Translates to: NKYDHQHQDSMG*SCLSLASGVLI Trigger: AATCAGGACGCCAGAGGCCAAGCTGAGACAAGAGCAACCCATACTATCCTGATGCTGGTGGTCATATTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164526.2
CDS CAA 72 bp	AAGACTGGAGAGAAATTATGGACAAACAGAAAGACATaGGCCAAGGTACCAACCCCAAACTGGCAAAGCAAG	+
Preference number: 6 (lower is better) Translates to: KTGEKLWTNRKT*AKVPTPNWQSK Trigger: CTTGCTTTGCCAGTTTGGGGTTGGTACCTTGGCCAATGTCTTTCTGTTTGTCCATAATTTCTCTCCAGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164526.2
CDS TCA 72 bp	AGTTTACCTCTATTAACAAGAACAAGAGTGACAAACTaGTGGATACTCAGGACACAGGTGGAACACAAATTT	+
Preference number: 6 (lower is better) Translates to: SLPLLTRTRVTN*WILRTQVEHKF Trigger: AAATTTGTGTTCCACCTGTGTCCTGAGTATCCATCAGTTTGTCACTCTTGTTCTTGTTAATAGAGGTAAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164526.2

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