Pregenerated sensors for VMN1R93 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096164

Ensembl transcript IDs: ENSMUST00000098747.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 72 bp	CACCTGTCTGGGCCTCTGTTTAGAACCAGTCAAGACTaGAGAGAAATTATGGACAAACAGGAAGACATTGGC	+
Preference number: 6 (lower is better) Translates to: HLSGPLFRTSQD*REIMDKQEDIG Trigger: GCCAATGTCTTCCTGTTTGTCCATAATTTCTCTCCAGTCTTGACTGGTTCTAAACAGAGGCCCAGACAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098747.2
CDS CCA 72 bp	AGACTGGAGAGAAATTATGGACAAACAGGAAGACATTaGCCATGGTCCCAACCCCAAACTGGCAAAGCAAAA	+
Preference number: 6 (lower is better) Translates to: RLERNYGQTGRH*PWSQPQTGKAK Trigger: TTTTGCTTTGCCAGTTTGGGGTTGGGACCATGGCCAATGTCTTCCTGTTTGTCCATAATTTCTCTCCAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098747.2
CDS CAA 72 bp	TTGTTTGGAAATACAGTGAGGAATAGAGTCAAGGCATaGGCCACAGCCATGTGGCTTAAAATCACCTGTCTG	+
Preference number: 6 (lower is better) Translates to: LFGNTVRNRVKA*ATAMWLKITCL Trigger: CAGACAGGTGATTTTAAGCCACATGGCTGTGGCCAATGCCTTGACTCTATTCCTCACTGTATTTCCAAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098747.2
CDS CCA 72 bp	CTGGTCCAGACCATGATGCTCATGAATGTGGCATCATaGGAAAACTGCAAGAAGACAATTCTTACAGTGAAT	+
Preference number: 6 (lower is better) Translates to: LVQTMMLMNVAS*ENCKKTILTVN Trigger: ATTCACTGTAAGAATTGTCTTCTTGCAGTTTTCCCATGATGCCACATTCATGAGCATCATGGTCTGGACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098747.2
CDS CAA 72 bp	TCAGTTGGAGGATTTCTTGGAGCAAAAGCCATCATGTaGTTTGGAAATACAGTGAGGAATAGAGTCAAGGCA	+
Preference number: 6 (lower is better) Translates to: SVGGFLGAKAIM*FGNTVRNRVKA Trigger: TGCCTTGACTCTATTCCTCACTGTATTTCCAAACAACATGATGGCTTTTGCTCCAAGAAATCCTCCAACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098747.2
CDS CAA 72 bp	ATTCTTACAGTGAATCCAGAAGTGGAACAGAAAAACTaGCTTTTAGAGTCAGTGTTATTGTCTGTTATCTGT	+
Preference number: 6 (lower is better) Translates to: ILTVNPEVEQKN*LLESVLLSVIC Trigger: ACAGATAACAGACAATAACACTGACTCTAAAAGCAAGTTTTTCTGTTCCACTTCTGGATTCACTGTAAGAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098747.2

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