RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN1R91 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095201

Ensembl transcript IDs: ENSMUST00000165330.3

Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCAGGAGAAGATCTCCAGTGTGGATCCTGGGTTCCTCCCTGGTCCTaGGACTTTAAATCGCTTAAGGATTCTGAGTGTGACCTGTTTCTG +
Preference number: 1 (lower is better)
Translates to: SGEDLQCGSWVPPWS*DFKSLKDSECDLFL
Trigger: CAGAAACAGGTCACACTCAGAATCCTTAAGCGATTTAAAGTCTCAGGACCAGGGAGGAACCCAGGATCCACACTGGAGATCTTCTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
3UTR TCA 90 bp GACAACTTTGCCTCCTCATTGTTCGGATATATATTGTCTCCTGTCTaGTTGGTAGGTGTTTGTGATGACTGGAAAACAATTTCACCATGG +
Preference number: 1 (lower is better)
Translates to: DNFASSLFGYILSPV*LVGVCDDWKTISPW
Trigger: CCATGGTGAAATTGTTTTCCAGTCATCACAAACACCTACCAATCAGACAGGAGACAATATATATCCGAACAATGAGGAGGCAAAGTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
3UTR GCA 90 bp CTGAGTGTGACCTGTTTCTGCCTCTTTTCCTATTTATTCTCGATATaGTCAGCAGATTGTACTGCTCTAGAAAGCACAAAGTTATGTTGT +
Preference number: 1 (lower is better)
Translates to: LSVTCFCLFSYLFSI*SADCTALESTKLCC
Trigger: ACAACATAACTTTGTGCTTTCTAGAGCAGTACAATCTGCTGAGCATATCGAGAATAAATAGGAAAAGAGGCAGAAACAGGTCACACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
3UTR-3UTR GCA 90 bp CAGAGTGAAGTCTTTCAGGAGAAGATCTCCAGTGTGGATCCTGGGTTCCTCCCTTTAGTGAAAATTGGTTaGATCAGTTTCAGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: QSEVFQEKISSVDPGFLPLVKIG*ISFSPA
Trigger: GGCTGGACTGAAACTGATGCAACCAATTTTCACTAA...AGGGAGGAACCCAGGATCCACACTGGAGATCTTCTCCTGAAAGACTTCACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
3UTR-3UTR CCA 90 bp AAAACAATTTCACCATGGCCCAGAGTGAAGTCTTTCAGGAGAAGATCTCCAGTGGATGTCTTCTGTATTTaGCAGTATTTAGGGGCTCTT +
Preference number: 2 (lower is better)
Translates to: KTISPWPRVKSFRRRSPVDVFCI*QYLGAL
Trigger: AAGAGCCCCTAAATACTGCCAAATACAGAAGACATC...CACTGGAGATCTTCTCCTGAAAGACTTCACTCTGGGCCATGGTGAAATTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
3UTR-3UTR TCA 90 bp ACTGAAAGCTATAACCACTCCAGATATTTATCTTGTGATCTTTCTTGCCTTGGTGTTCCTCCCTGGTCCTaGGACTTTAAATCGCTTAAG +
Preference number: 2 (lower is better)
Translates to: TESYNHSRYLSCDLSCLGVPPWS*DFKSLK
Trigger: CTTAAGCGATTTAAAGTCTCAGGACCAGGGAGGAAC...ACCAAGGCAAGAAAGATCACAAGATAAATATCTGGAGTGGTTATAGCTTTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
3UTR-3UTR GCA 90 bp ACTGAAAGCTATAACCACTCCAGATATTTATCTTGTGATCTTTCTTGCCTTGGTCAGCCTGCAGCAGAATaGAGTTATATACAGGAGAAC +
Preference number: 2 (lower is better)
Translates to: TESYNHSRYLSCDLSCLGQPAAE*SYIQEN
Trigger: GTTCTCCTGTATATAACTGCATTCTGCTGCAGGCTG...ACCAAGGCAAGAAAGATCACAAGATAAATATCTGGAGTGGTTATAGCTTTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
3UTR-3UTR GCA 90 bp ACTGAAAGCTATAACCACTCCAGATATTTATCTTGTGATCTTTCTTGCCTTGGTCTCAGCAGATTGTACTaGTCTAGAAAGCACAAAGTT +
Preference number: 2 (lower is better)
Translates to: TESYNHSRYLSCDLSCLGLSRLY*SRKHKV
Trigger: AACTTTGTGCTTTCTAGAGCAGTACAATCTGCTGAG...ACCAAGGCAAGAAAGATCACAAGATAAATATCTGGAGTGGTTATAGCTTTCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
3UTR-3UTR CCA 90 bp GTTCACAGAAGTAAGTACCACAAGTCAGATTATAAGTTTCATCACACTGAAAGCGGTGTTTGTGATGACTaGAAAACAATTTCACCATGG +
Preference number: 2 (lower is better)
Translates to: VHRSKYHKSDYKFHHTESGVCDD*KTISPW
Trigger: CCATGGTGAAATTGTTTTCCAGTCATCACAAACACC...GCTTTCAGTGTGATGAAACTTATAATCTGACTTGTGGTACTTACTTCTGTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
3UTR-3UTR GCA 90 bp GTTCACAGAAGTAAGTACCACAAGTCAGATTATAAGTTTCATCACACTGAAAGCAGTGTGACCTGTTTCTaGCTCTTTTCCTATTTATTC +
Preference number: 2 (lower is better)
Translates to: VHRSKYHKSDYKFHHTESSVTCF*LFSYLF
Trigger: GAATAAATAGGAAAAGAGGCAGAAACAGGTCACACT...GCTTTCAGTGTGATGAAACTTATAATCTGACTTGTGGTACTTACTTCTGTGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
3UTR-3UTR CAA 90 bp CAGAGTGAAGTCTTTCAGGAGAAGATCTCCAGTGTGGATCCTGGGTTCCTCCCTTATGTTGTTCAGTGCTaGACTCTCACCTCAGTAGGG +
Preference number: 3 (lower is better)
Translates to: QSEVFQEKISSVDPGFLPYVVQC*TLTSVG
Trigger: CCCTACTGAGGTGAGAGTCAAGCACTGAACAACATA...AGGGAGGAACCCAGGATCCACACTGGAGATCTTCTCCTGAAAGACTTCACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
3UTR TCA 72 bp GTGATGACTGGAAAACAATTTCACCATGGCCCAGAGTaGAGTCTTTCAGGAGAAGATCTCCAGTGTGGATCC +
Preference number: 3 (lower is better)
Translates to: VMTGKQFHHGPE*SLSGEDLQCGS
Trigger: GGATCCACACTGGAGATCTTCTCCTGAAAGACTTCACTCTGGGCCATGGTGAAATTGTTTTCCAGTCATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
3UTR-3UTR CAA 90 bp CATCAGTTTCAGTCCAGCCTGCAGCAGAATGCAGTTATATACAGGAGAACAGAGAGATGTCTTCTGTATTaGGCAGTATTTAGGGGCTCT +
Preference number: 3 (lower is better)
Translates to: HQFQSSLQQNAVIYRRTERCLLY*AVFRGS
Trigger: AGAGCCCCTAAATACTGCCAAATACAGAAGACATCT...CTCTGTTCTCCTGTATATAACTGCATTCTGCTGCAGGCTGGACTGAAACTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
3UTR TCA 72 bp GCAGAATGCAGTTATATACAGGAGAACAGAGGATGGTaGATAACTTCACTTACCATGTCAGTCAGATTCCAA +
Preference number: 3 (lower is better)
Translates to: AECSYIQENRGW*ITSLTMSVRFQ
Trigger: TTGGAATCTGACTGACATGGTAAGTGAAGTTATTCACCATCCTCTGTTCTCCTGTATATAACTGCATTCTGC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
3UTR TCA 72 bp GCCTCCTCATTGTTCGGATATATATTGTCTCCTGTCTaGTTGGTAGGTGTTTGTGATGACTGGAAAACAATT +
Preference number: 3 (lower is better)
Translates to: ASSLFGYILSPV*LVGVCDDWKTI
Trigger: AATTGTTTTCCAGTCATCACAAACACCTACCAATCAGACAGGAGACAATATATATCCGAACAATGAGGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
3UTR GCA 72 bp ACCTGTTTCTGCCTCTTTTCCTATTTATTCTCGATATaGTCAGCAGATTGTACTGCTCTAGAAAGCACAAAG +
Preference number: 3 (lower is better)
Translates to: TCFCLFSYLFSI*SADCTALESTK
Trigger: CTTTGTGCTTTCTAGAGCAGTACAATCTGCTGAGCATATCGAGAATAAATAGGAAAAGAGGCAGAAACAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
3UTR GCA 72 bp TTAAATCGCTTAAGGATTCTGAGTGTGACCTGTTTCTaGCTCTTTTCCTATTTATTCTCGATATGCTCAGCA +
Preference number: 3 (lower is better)
Translates to: LNRLRILSVTCF*LFSYLFSICSA
Trigger: TGCTGAGCATATCGAGAATAAATAGGAAAAGAGGCAGAAACAGGTCACACTCAGAATCCTTAAGCGATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
CDS-3UTR CCA 90 bp CCCAGAGTGAAGTCTTTCAGGAGAAGATCTCCAGTGTGGATCCTGGGTTCCTCCCAAACAGAAAGACATTaGCCACGGTCCCAACCACAA +
Preference number: 4 (lower is better)
Translates to: PRVKSFRRRSPVWILGSSQTERH*PRSQPQ
Trigger: TTGTGGTTGGGACCGTGGCCAATGTCTTTCTGTTTG...GGAGGAACCCAGGATCCACACTGGAGATCTTCTCCTGAAAGACTTCACTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
CDS-3UTR GCA 90 bp CATCAGTTTCAGTCCAGCCTGCAGCAGAATGCAGTTATATACAGGAGAACAGAGGACACTGGGGAAGACTaGAGCCAGAACCTCACTGAC +
Preference number: 4 (lower is better)
Translates to: HQFQSSLQQNAVIYRRTEDTGED*SQNLTD
Trigger: GTCAGTGAGGTTCTGGCTGCAGTCTTCCCCAGTGTC...CTCTGTTCTCCTGTATATAACTGCATTCTGCTGCAGGCTGGACTGAAACTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
CDS-3UTR CCA 90 bp CATCAGTTTCAGTCCAGCCTGCAGCAGAATGCAGTTATATACAGGAGAACAGAGCTAAAGGGCAGACACTaGGGAAGACTGCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: HQFQSSLQQNAVIYRRTELKGRH*GRLQPE
Trigger: TTCTGGCTGCAGTCTTCCCCAGTGTCTGCCCTTTAG...CTCTGTTCTCCTGTATATAACTGCATTCTGCTGCAGGCTGGACTGAAACTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
CDS-3UTR CCA 90 bp GTTCACAGAAGTAAGTACCACAAGTCAGATTATAAGTTTCATCACACTGAAAGCAGCATCAGGATAGTATaGGTTGCTCTGGACCCAGCT +
Preference number: 4 (lower is better)
Translates to: VHRSKYHKSDYKFHHTESSIRIV*VALDPA
Trigger: AGCTGGGTCCAGAGCAACCCATACTATCCTGATGCT...GCTTTCAGTGTGATGAAACTTATAATCTGACTTGTGGTACTTACTTCTGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
CDS-3UTR TCA 90 bp ATTAAACTGTTTAGTGAAAATTGGTTGCATCAGTTTCAGTCCAGCCTGCAGCAGTGTTTGGAAATATCGTaGGGAATAGAGTCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: IKLFSENWLHQFQSSLQQCLEIS*GIESRH
Trigger: ATGCCTTGACTCTATTCCTCACGATATTTCCAAACA...CTGCTGCAGGCTGGACTGAAACTGATGCAACCAATTTTCACTAAACAGTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
CDS-3UTR GCA 90 bp GTTCACAGAAGTAAGTACCACAAGTCAGATTATAAGTTTCATCACACTGAAAGCGCATCATGGGAAAACTaGAAGAAGACAATGCCTACA +
Preference number: 4 (lower is better)
Translates to: VHRSKYHKSDYKFHHTESASWEN*KKTMPT
Trigger: TGTAGGCATTGTCTTCTTGCAGTTTTCCCATGATGC...GCTTTCAGTGTGATGAAACTTATAATCTGACTTGTGGTACTTACTTCTGTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
CDS-3UTR CAA 90 bp CAGAGTGAAGTCTTTCAGGAGAAGATCTCCAGTGTGGATCCTGGGTTCCTCCCTTGCTCTGGACCCAGCTaGGCCTCTGGGGTCCTGATT +
Preference number: 5 (lower is better)
Translates to: QSEVFQEKISSVDPGFLPCSGPS*ASGVLI
Trigger: AATCAGGACCCCAGAGGCCAAGCTGGGTCCAGAGCA...AGGGAGGAACCCAGGATCCACACTGGAGATCTTCTCCTGAAAGACTTCACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
CDS CCA 90 bp TGTCTGGGTCTCTGTTTAGAACCAGTCAAGACTGGAGAGAAATTATaGACAAACAGAAAGACATTGGCCACGGTCCCAACCACAAACTGG +
Preference number: 5 (lower is better)
Translates to: CLGLCLEPVKTGEKL*TNRKTLATVPTTNW
Trigger: CCAGTTTGTGGTTGGGACCGTGGCCAATGTCTTTCTGTTTGTCCATAATTTCTCTCCAGTCTTGACTGGTTCTAAACAGAGACCCAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
CDS CCA 90 bp AACCAGTCAAGACTGGAGAGAAATTATGGACAAACAGAAAGACATTaGCCACGGTCCCAACCACAAACTGGCAAAGCAAGAGGATCTGAA +
Preference number: 5 (lower is better)
Translates to: NQSRLERNYGQTERH*PRSQPQTGKARGSE
Trigger: TTCAGATCCTCTTGCTTTGCCAGTTTGTGGTTGGGACCGTGGCCAATGTCTTTCTGTTTGTCCATAATTTCTCTCCAGTCTTGACTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
CDS-3UTR CAA 90 bp GTTCACAGAAGTAAGTACCACAAGTCAGATTATAAGTTTCATCACACTGAAAGCCCAAAAGCCATCATGTaGTTTGGAAATATCGTGAGG +
Preference number: 5 (lower is better)
Translates to: VHRSKYHKSDYKFHHTESPKAIM*FGNIVR
Trigger: CCTCACGATATTTCCAAACAACATGATGGCTTTTGG...GCTTTCAGTGTGATGAAACTTATAATCTGACTTGTGGTACTTACTTCTGTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
CDS CAA 72 bp CAGCATCAGGATAGTATGGGTTGCTCTGGACCCAGCTaGGCCTCTGGGGTCCTGATTGGGAGTGAGGATGTG +
Preference number: 6 (lower is better)
Translates to: QHQDSMGCSGPS*ASGVLIGSEDV
Trigger: CACATCCTCACTCCCAATCAGGACCCCAGAGGCCAAGCTGGGTCCAGAGCAACCCATACTATCCTGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
CDS CAA 90 bp TGTGATCACCAGCATCAGGATAGTATGGGTTGCTCTGGACCCAGCTaGGCCTCTGGGGTCCTGATTGGGAGTGAGGATGTGCTGCATTCG +
Preference number: 6 (lower is better)
Translates to: CDHQHQDSMGCSGPS*ASGVLIGSEDVLHS
Trigger: CGAATGCAGCACATCCTCACTCCCAATCAGGACCCCAGAGGCCAAGCTGGGTCCAGAGCAACCCATACTATCCTGATGCTGGTGATCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
CDS CCA 72 bp AAGCTAACAAATGTGATCACCAGCATCAGGATAGTATaGGTTGCTCTGGACCCAGCTTGGCCTCTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: KLTNVITSIRIV*VALDPAWPLGS
Trigger: GGACCCCAGAGGCCAAGCTGGGTCCAGAGCAACCCATACTATCCTGATGCTGGTGATCACATTTGTTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
CDS GCA 72 bp AACAAATGTGATCACCAGCATCAGGATAGTATGGGTTaGTCTGGACCCAGCTTGGCCTCTGGGGTCCTGATT +
Preference number: 6 (lower is better)
Translates to: NKCDHQHQDSMG*SGPSLASGVLI
Trigger: AATCAGGACCCCAGAGGCCAAGCTGGGTCCAGAGCAACCCATACTATCCTGATGCTGGTGATCACATTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
CDS TCA 72 bp TGGGACCAAAAGCCATCATGTTGTTTGGAAATATCGTaGGGAATAGAGTCAAGGCATTGGCCACAGCCATGT +
Preference number: 6 (lower is better)
Translates to: WDQKPSCCLEIS*GIESRHWPQPC
Trigger: ACATGGCTGTGGCCAATGCCTTGACTCTATTCCTCACGATATTTCCAAACAACATGATGGCTTTTGGTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
CDS CAA 72 bp AAGACTGGAGAGAAATTATGGACAAACAGAAAGACATaGGCCACGGTCCCAACCACAAACTGGCAAAGCAAG +
Preference number: 6 (lower is better)
Translates to: KTGEKLWTNRKT*ATVPTTNWQSK
Trigger: CTTGCTTTGCCAGTTTGTGGTTGGGACCGTGGCCAATGTCTTTCTGTTTGTCCATAATTTCTCTCCAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
CDS CAA 72 bp TTGTTTGGAAATATCGTGAGGAATAGAGTCAAGGCATaGGCCACAGCCATGTGGCTTAAAATCACCTGTCTG +
Preference number: 6 (lower is better)
Translates to: LFGNIVRNRVKA*ATAMWLKITCL
Trigger: CAGACAGGTGATTTTAAGCCACATGGCTGTGGCCAATGCCTTGACTCTATTCCTCACGATATTTCCAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
CDS TCA 72 bp CCTTTACCTCTATTAACAGGAACCAGAGTGACAAACTaGTGGACACTCAGGACACAGGTGGAACACAAATTT +
Preference number: 6 (lower is better)
Translates to: PLPLLTGTRVTN*WTLRTQVEHKF
Trigger: AAATTTGTGTTCCACCTGTGTCCTGAGTGTCCATCAGTTTGTCACTCTGGTTCCTGTTAATAGAGGTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3
CDS CAA 72 bp AATTCTAATTTACATTTGAGTTCAGTTGGAGGAGTTTaGGGACCAAAAGCCATCATGTTGTTTGGAAATATC +
Preference number: 6 (lower is better)
Translates to: NSNLHLSSVGGV*GPKAIMLFGNI
Trigger: GATATTTCCAAACAACATGATGGCTTTTGGTCCCAAAACTCCTCCAACTGAACTCAAATGTAAATTAGAATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165330.3