RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN1R90 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000100586

Ensembl transcript IDs: ENSMUST00000185220.3, ENSMUST00000226264.2, ENSMUST00000226510.2, ENSMUST00000226802.2, ENSMUST00000227566.2, ENSMUST00000227692.2, ENSMUST00000227788.2, ENSMUST00000227855.2

Found 485 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATTTCTAATGCTATCCTGAAAGCTCCCTATACCCTCCCCATGCCCTaGTCCCCTACCTACCCACTCACACTTCTTGGCCCTGGCACTCCC +
Preference number: 1 (lower is better)
Translates to: ISNAILKAPYTLPMP*SPTYPLTLLGPGTP
Trigger: GGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGTAGGTAGGGGAGCAGGGCATGGGGAGGGTATAGGGAGCTTTCAGGATAGCATTAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR GCA 90 bp CACTGCACTACATTTCCACCCCACACTTCAAATGCCCCCAAATCCTaGCATCTCTTTAACACACTTTCTCTCTCTCTCCATCCCACCCTA +
Preference number: 1 (lower is better)
Translates to: HCTTFPPHTSNAPKS*HLFNTLSLSLHPTL
Trigger: TAGGGTGGGATGGAGAGAGAGAGAAAGTGTGTTAAAGAGATGGCAGGATTTGGGGGCATTTGAAGTGTGGGGTGGAAATGTAGTGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR TCA 90 bp AACTTGTTGGCATCTGCAATAGTGTCTGGGTTTGGTGATTGTATATaGGATGGATGCCCAGGTGGAGCAATCTGTGGATGGCCTTTCCTT +
Preference number: 1 (lower is better)
Translates to: NLLASAIVSGFGDCI*DGCPGGAICGWPFL
Trigger: AAGGAAAGGCCATCCACAGATTGCTCCACCTGGGCATCCATCTCATATACAATCACCAAACCCAGACACTATTGCAGATGCCAACAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR GCA 90 bp TGGAGCATGTGCATTTATTACCAGTTGGAACATCTTCTGGGTATATaGCCAGGACAGGTATTGCTGGATCTTCCGGTAGTACTACATCCA +
Preference number: 1 (lower is better)
Translates to: WSMCIYYQLEHLLGI*PGQVLLDLPVVLHP
Trigger: TGGATGTAGTACTACCGGAAGATCCAGCAATACCTGTCCTGGGCATATACCCAGAAGATGTTCCAACTGGTAATAAATGCACATGCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 90 bp GGTGATTGTATATGGGACAGATCCTCAGGTGGATCAATCTCTGAATaGTCATTCCCTCAGTCTCTAGTCCACACTTTGTCTTGTAACTCC +
Preference number: 1 (lower is better)
Translates to: GDCIWDRSSGGSISE*SFPQSLVHTLSCNS
Trigger: GGAGTTACAAGACAAAGTGTGGACTAGAGACTGAGGGAATGACCATTCAGAGATTGATCCACCTGAGGATCTGTCCCATATACAATCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR TCA 90 bp CCTCTCTTCCCAACGAGTACATACACTTCTGCATTTGTCAGAAACTaGAAGAGCTTCTTTGGAGACTATATAAGGCTCCTGTCAGAAAGC +
Preference number: 1 (lower is better)
Translates to: PLFPTSTYTSAFVRN*KSFFGDYIRLLSES
Trigger: GCTTTCTGACAGGAGCCTTATATAGTCTCCAAAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAGAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR GCA 90 bp GCAACAAGTGCTGCTGGCTCAACTGGTGGTAAGCATGTAGAAGAATaGAAATTGATCCATTTTTATCTCCGTGTACAAAGCTCAAGTCCA +
Preference number: 1 (lower is better)
Translates to: ATSAAGSTGGKHVEE*KLIHFYLRVQSSSP
Trigger: TGGACTTGAGCTTTGTACACGGAGATAAAAATGGATCAATTTGCATTCTTCTACATGCTTACCACCAGTTGAGCCAGCAGCACTTGTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 90 bp GAGTACATACACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTTaGAGACTATATAAGGCTCCTGTCAGAAAGCACTTTTGGGCATCC +
Preference number: 1 (lower is better)
Translates to: EYIHFCICQKLKELL*RLYKAPVRKHFWAS
Trigger: GGATGCCCAAAAGTGCTTTCTGACAGGAGCCTTATATAGTCTCCAAAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 90 bp GTCCTTTCTCTAGATCCTTCACTGGGAATCATGTGTTTTGTCCAATaGATAGAAGTGAGTATCCAGTTCTGTATTTGTCAGGTACTGGCA +
Preference number: 1 (lower is better)
Translates to: VLSLDPSLGIMCFVQ*IEVSIQFCICQVLA
Trigger: TGCCAGTACCTGACAAATACAGAACTGGATACTCACTTCTATCCATTGGACAAAACACATGATTCCCAGTGAAGGATCTAGAGAAAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR TCA 90 bp TGTCACAGGTTGGACTTAAACTCCCTCTTTACTCAGTGCTATTATTaGTTACATAGCAATTGTACTACCCCAGCTTACATAGTGCTGGAC +
Preference number: 1 (lower is better)
Translates to: CHRLDLNSLFTQCYY*LHSNCTTPAYIVLD
Trigger: GTCCAGCACTATGTAAGCTGGGGTAGTACAATTGCTATGTAATCAATAATAGCACTGAGTAAAGAGGGAGTTTAAGTCCAACCTGTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 90 bp TATCCTCTTATCAGTGAGTGCATTTCATGTGTGTTCTTTTGTGATTaGGTTACCTCACTTAGGATGATATCCTGTAGATCCATCCATTTG +
Preference number: 1 (lower is better)
Translates to: YPLISECISCVFFCD*VTSLRMISCRSIHL
Trigger: CAAATGGATGGATCTACAGGATATCATCCTAAGTGAGGTAACCCAATCACAAAAGAACACACATGAAATGCACTCACTGATAAGAGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 90 bp AGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACTaGGCTAATATTCTATTATCAGTGAGTGCATATCATGTGTGCTCT +
Preference number: 1 (lower is better)
Translates to: SFMWFVNCILGIPSY*ANILLSVSAYHVCS
Trigger: AGAGCACACATGATATGCACTCACTGATAATAGAATATTAGCCCAGTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR TCA 90 bp CAAATAATAACAAACATGGTTTTGTTTAGACAGCTCAGAAGGTACTaGCCAGAGTTTATTAGGAGAGTAGAACCCATTCAGCATATTTGC +
Preference number: 1 (lower is better)
Translates to: QIITNMVLFRQLRRY*PEFIRRVEPIQHIC
Trigger: GCAAATATGCTGAATGGGTTCTACTCTCCTAATAAACTCTGGTCAGTACCTTCTGAGCTGTCTAAACAAAACCATGTTTGTTATTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR TCA 90 bp CTCTTTGGAAATACCCCATTAATTTCCATTATGACTGTACATGCTTaGAATTCTACCAACAATAGACTACTTACCTTCTCCACATTCCTG +
Preference number: 1 (lower is better)
Translates to: LFGNTPLISIMTVHA*NSTNNRLLTFSTFL
Trigger: CAGGAATGTGGAGAAGGTAAGTAGTCTATTGTTGGTAGAATTTCAAGCATGTACAGTCATAATGGAAATTAATGGGGTATTTCCAAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 90 bp CATATTGTCTTCATCCATTCTTCAACTGAGGGATATAGGAAAATGTaGTGCATTGGAAAATTCATGGCATTTATGAGGGATATTAGGGAT +
Preference number: 1 (lower is better)
Translates to: HIVFIHSSTEGYRKM*CIGKFMAFMRDIRD
Trigger: ATCCCTAATATCCCTCATAAATGCCATGAATTTTCCAATGCACCACATTTTCCTATATCCCTCAGTTGAAGAATGGATGAAGACAATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 90 bp AGTTTCATATGGTGTATGAATTGCATCTTGGGTATTGCAATTTTCTaGGCTAATATCCTCTTATCAGTGAGTGCATTTCATGTGTGTTCT +
Preference number: 1 (lower is better)
Translates to: SFIWCMNCILGIAIF*ANILLSVSAFHVCS
Trigger: AGAACACACATGAAATGCACTCACTGATAAGAGGATATTAGCCCAGAAAATTGCAATACCCAAGATGCAATTCATACACCATATGAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR GCA 90 bp ACATTTTGGTCTTCCTTCATCTTGAGTTTCATATGGTGTATGAATTaGATCTTGGGTATTGCAATTTTCTGGGCTAATATCCTCTTATCA +
Preference number: 1 (lower is better)
Translates to: TFWSSFILSFIWCMN*ILGIAIFWANILLS
Trigger: TGATAAGAGGATATTAGCCCAGAAAATTGCAATACCCAAGATGCAATTCATACACCATATGAAACTCAAGATGAAGGAAGACCAAAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 90 bp ATCAAAGAATCCACATTTTGGTCTTCCTTCATCTTGAGTTTCATATaGTGTATGAATTGCATCTTGGGTATTGCAATTTTCTGGGCTAAT +
Preference number: 1 (lower is better)
Translates to: IKESTFWSSFILSFI*CMNCILGIAIFWAN
Trigger: ATTAGCCCAGAAAATTGCAATACCCAAGATGCAATTCATACACCATATGAAACTCAAGATGAAGGAAGACCAAAATGTGGATTCTTTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 90 bp CCTCCCCTTAACCCTCCCCCTGATCACCAACCCACCCACTGGCCCTaGAATTCCCTTACACTGGGAAACAGAGCCTTCACAAGACCAAGG +
Preference number: 2 (lower is better)
Translates to: PPLNPPPDHQPTHWP*NSLTLGNRAFTRPR
Trigger: CCTTGGTCTTGTGAAGGCTCTGTTTCCCAGTGTAAGGGAATTCAAGGGCCAGTGGGTGGGTTGGTGATCAGGGGGAGGGTTAAGGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGCCTATACCCTCCCCATaGCCTGCTCCCCTACCTACC +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLPIPSP*PAPLPT
Trigger: GGTAGGTAGGGGAGCAGGGCATGGGGAGGGTATAGG...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp CCTACCTACCCACTCACACTTCTTGGCCCTGGCACTCCCCTTACTGGGACATATGTGGTTGTACCAGCTTaGAATCCCACCTACAGAGCA +
Preference number: 2 (lower is better)
Translates to: PTYPLTLLGPGTPLTGTYVVVPA*NPTYRA
Trigger: TGCTCTGTAGGTGGGATTGCAAGCTGGTACAACCAC...ATATGTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGTAGGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGCCCACTCACACTTCTTaGCCCTGGCACTCCCCTTAC +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLPTHTS*PWHSPY
Trigger: GTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGG...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp CCTACCTACCCACTCACACTTCTTGGCCCTGGCACTCCCCTTACTGGGACATATTTGAAGACCCAGAAATaGACCAACACACCTGTGGTC +
Preference number: 2 (lower is better)
Translates to: PTYPLTLLGPGTPLTGTYLKTQK*TNTPVV
Trigger: GACCACAGGTGTGTTGGTTCATTTCTGGGTCTTCAA...ATATGTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGTAGGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp TTCATATGGTTGTCCCTTCTATGGGACTGCAAATCCTTCTGCTCCTTAGGTCCTCCTATACCCTCCCCATaGCCTGCTCCCCTACCTACC +
Preference number: 2 (lower is better)
Translates to: FIWLSLLWDCKSFCSLGPPIPSP*PAPLPT
Trigger: GGTAGGTAGGGGAGCAGGGCATGGGGAGGGTATAGG...AGGACCTAAGGAGCAGAAGGATTTGCAGTCCCATAGAAGGGACAACCATATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGTGGTGGTTTAGTCCCTaGGAGCTCTGGGGCTTACTG +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLWWFSP*ELWGLL
Trigger: CAGTAAGCCCCAGAGCTCCCAGGGACTAAACCACCA...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGACCCTCCCCATGCCCTaGTCCCCTACCTACCCACTC +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWTLPMP*SPTYPL
Trigger: GAGTGGGTAGGTAGGGGAGCAGGGCATGGGGAGGGT...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCCCTATACCCTCCCCATaGCCTGCTCCCCTACCTACC +
Preference number: 2 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIPIPSP*PAPLPT
Trigger: GGTAGGTAGGGGAGCAGGGCATGGGGAGGGTATAGG...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGCACACTTCTTGGCCCTaGCACTCCCCTTACTGGGAC +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLHTSWP*HSPYWD
Trigger: GTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTG...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TTCATATGGTTGTCCCTTCTATGGGACTGCAAATCCTTCTGCTCCTTAGGTCCTCCCACTCACACTTCTTaGCCCTGGCACTCCCCTTAC +
Preference number: 2 (lower is better)
Translates to: FIWLSLLWDCKSFCSLGPPTHTS*PWHSPY
Trigger: GTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGG...AGGACCTAAGGAGCAGAAGGATTTGCAGTCCCATAGAAGGGACAACCATATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGCCCACTCACACTTCTTaGCCCTGGCACTCCCCTTAC +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLPTHTS*PWHSPY
Trigger: GTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGG...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 90 bp GGTTTAGGCCCTGGGAACTCTAGGAGTACTGGTTGGTTTATATTGTaGTTCCTCATATGGGGCTCCAAACCCCTTCAGCTCCTTTGGTCC +
Preference number: 2 (lower is better)
Translates to: GLGPGNSRSTGWFIL*FLIWGSKPLQLLWS
Trigger: GGACCAAAGGAGCTGAAGGGGTTTGGAGCCCCATATGAGGAACAACAATATAAACCAACCAGTACTCCTAGAGTTCCCAGGGCCTAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp CCTACCTACCCACTCACACTTCTTGGCCCTGGCACTCCCCTTACTGGGACATATGCATTTGTCAGAAACTaGAAGAGCTTCTTTGGAGAC +
Preference number: 2 (lower is better)
Translates to: PTYPLTLLGPGTPLTGTYAFVRN*KSFFGD
Trigger: GTCTCCAAAGAAGCTCTTTCAGTTTCTGACAAATGC...ATATGTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGTAGGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGGTGGTTGTACCAGCTTaGAATCCCACCTACAGAGCA +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLVVVPA*NPTYRA
Trigger: TGCTCTGTAGGTGGGATTGCAAGCTGGTACAACCAC...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp CCTACCTACCCACTCACACTTCTTGGCCCTGGCACTCCCCTTACTGGGACATATCCTTCTCCACATTCCTaGCACAATGAACTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: PTYPLTLLGPGTPLTGTYPSPHS*HNELFF
Trigger: AAAGAAGAGTTCATTGTGCCAGGAATGTGGAGAAGG...ATATGTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGTAGGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCCACACTTCTTGGCCCTaGCACTCCCCTTACTGGGAC +
Preference number: 2 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIHTSWP*HSPYWD
Trigger: GTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTG...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGCCCACTCACACTTCTTaGCCCTGGCACTCCCCTTAC +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQPTHTS*PWHSPY
Trigger: GTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGG...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGTGGTGGTTTAGTCCCTaGGAGCTCTGGGGCTTACTG +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLWWFSP*ELWGLL
Trigger: CAGTAAGCCCCAGAGCTCCCAGGGACTAAACCACCA...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGAGGTGGAGCAATCTGTaGATGGCCTTTCCTTCAGTC +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLRWSNL*MAFPSV
Trigger: GACTGAAGGAAAGGCCATCCACAGATTGCTCCACCT...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGGCCACTTCCACTTCCTaGCCCTGTCATTCCCCTACA +
Preference number: 2 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQATSTS*PCHSPT
Trigger: TGTAGGGGAATGACAGGGCCAGGAAGTGGAAGTGGC...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 90 bp GAGACATGGGATGCTTCTTGTGTGAGCATCAAATTAGACCAGTCATaGGATGTGATAGCTGTAAGCTGTGAGCCACCATTGCCCCCAGCA +
Preference number: 2 (lower is better)
Translates to: ETWDASCVSIKLDQS*DVIAVSCEPPLPPA
Trigger: TGCTGGGGGCAATGGTGGCTCACAGCTTACAGCTATCACATCCAATGACTGGTCTAATTTGATGCTCACACAAGAAGCATCCCATGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 90 bp TTTCTGAGGAACCGCCGGACTGACTTCCAGAGTGGTTGTACAAGCTaGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: FLRNRRTDFQSGCTS*QSHQQWKIVPISLQ
Trigger: CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAGTCAGTCCGGCGGTTCCTCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGCAGCTTCTGGTAGTGTaGCTAAAGCCACTGAAAGCA +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLQLLVV*LKPLKA
Trigger: TGCTTTCAGTGGCTTTAGTCACACTACCAGAAGCTG...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGTTGAAGACCCAGAAATaGACCAACACACCTGTGGTC +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLLKTQK*TNTPVV
Trigger: GACCACAGGTGTGTTGGTTCATTTCTGGGTCTTCAA...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp CCTACCTACCCACTCACACTTCTTGGCCCTGGCACTCCCCTTACTGGGACATATGTGATAAAAACTGCATaGCATTGTTACACTGACAGG +
Preference number: 2 (lower is better)
Translates to: PTYPLTLLGPGTPLTGTYVIKTA*HCYTDR
Trigger: CCTGTCAGTGTAACAATGTCATGCAGTTTTTATCAC...ATATGTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGTAGGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGATGCTGTCGAGGGTGTaGAGAAAGAGAAACACTCCT +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLMLSRV*RKRNTP
Trigger: AGGAGTGTTTCTCTTTCTCCACACCCTCGACAGCAT...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGCACACTTCTTGGCCCTaGCACTCCCCTTACTGGGAC +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWHTSWP*HSPYWD
Trigger: GTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTG...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGCTGTGCTCTGTCCAATaGATGGCTGTGAGCATACTA +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLLCSVQ*MAVSIL
Trigger: TAGTATGCTCACAGCCATCCATTGGACAGAGCACAG...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCTGGTGGTTTAGTCCCTaGGAGCTCTGGGGCTTACTG +
Preference number: 2 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIWWFSP*ELWGLL
Trigger: CAGTAAGCCCCAGAGCTCCCAGGGACTAAACCACCA...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTTGGTGGTTTAGTCCCTaGGAGCTCTGGGGCTTACTG +
Preference number: 2 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSWWFSP*ELWGLL
Trigger: CAGTAAGCCCCAGAGCTCCCAGGGACTAAACCACCA...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGGGAGCAATCTGTGGATaGCCTTTCCTTCAGTCTCTA +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLGAICG*PFLQSL
Trigger: TAGAGACTGAAGGAAAGGCCATCCACAGATTGCTCC...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGAAATCAAAACAACCCTaGGATGACACCTCACACCAG +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLKSKQP*DDTSHQ
Trigger: CTGGTGTGAGGTGTCATCTCAGGGTTGTTTTGATTT...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp CCTACCTACCCACTCACACTTCTTGGCCCTGGCACTCCCCTTACTGGGACATATGGAATACTGAATGAATaGGAAGCACCTAAAGAAATG +
Preference number: 2 (lower is better)
Translates to: PTYPLTLLGPGTPLTGTYGILNE*EAPKEM
Trigger: CATTTCTTTAGGTGCTTCTCATTCATTCAGTATTCC...ATATGTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGTAGGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp CCTACCTACCCACTCACACTTCTTGGCCCTGGCACTCCCCTTACTGGGACATATGTTTCATGTGGTTTGTaGATTGTATCTTGGGTATTC +
Preference number: 2 (lower is better)
Translates to: PTYPLTLLGPGTPLTGTYVSCGL*IVSWVF
Trigger: GAATACCCAAGATACAATTCACAAACCACATGAAAC...ATATGTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGTAGGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGTTTCTAATGCTATCCTaGAAGCTCCCTATACCCTCC +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLFLMLS*KLPIPS
Trigger: GGAGGGTATAGGGAGCTTTCAGGATAGCATTAGAAA...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGTCCTGGTTTCACCTTTaGAACACCACTTTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQSWFHL*NTTFPS
Trigger: GGAGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGA...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGTCCTGGTTTCACCTTTaGAACACCACTTTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLSWFHL*NTTFPS
Trigger: GGAGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGA...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCTCCAGGTTTCCCCTCTaGAAACCCCTTATCCTCTCC +
Preference number: 2 (lower is better)
Translates to: VPLLEDLPGYKRRRESFISRFPL*KPLILS
Trigger: GGAGAGGATAAGGGGTTTTCAGAGGGGAAACCTGGA...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp TTCATATGGTTGTCCCTTCTATGGGACTGCAAATCCTTCTGCTCCTTAGGTCCTGTGGTTGTACCAGCTTaGAATCCCACCTACAGAGCA +
Preference number: 2 (lower is better)
Translates to: FIWLSLLWDCKSFCSLGPVVVPA*NPTYRA
Trigger: TGCTCTGTAGGTGGGATTGCAAGCTGGTACAACCAC...AGGACCTAAGGAGCAGAAGGATTTGCAGTCCCATAGAAGGGACAACCATATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTACCCTCCCCATGCCCTaGTCCCCTACCTACCCACTC +
Preference number: 2 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPTLPMP*SPTYPL
Trigger: GAGTGGGTAGGTAGGGGAGCAGGGCATGGGGAGGGT...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGATCATCTGCTACATATaGATCTGGAGCCATGAGTCC +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLIICYI*IWSHES
Trigger: GGACTCATGGCTCCAGATGCATATGTAGCAGATGAT...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp CCTACCTACCCACTCACACTTCTTGGCCCTGGCACTCCCCTTACTGGGACATATTCACACCAGTCAGAATaGCTAAGATCAAAAACTAAG +
Preference number: 2 (lower is better)
Translates to: PTYPLTLLGPGTPLTGTYSHQSE*LRSKTK
Trigger: CTTAGTTTTTGATCTTAGCCATTCTGACTGGTGTGA...ATATGTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGTAGGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGTGGTGGTTTAGTCCCTaGGAGCTCTGGGGCTTACTG +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWWWFSP*ELWGLL
Trigger: CAGTAAGCCCCAGAGCTCCCAGGGACTAAACCACCA...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGTTAACTTTCTGGGTCTaGGTTACCTCCTTCAGGTTG +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLLTFWV*VTSFRL
Trigger: CAACCTGAAGGAGGTAACCCAGACCCAGAAAGTTAA...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGAGGTGGAGCAATCTGTaGATGGCCTTTCCTTCAGTC +
Preference number: 2 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQRWSNL*MAFPSV
Trigger: GACTGAAGGAAAGGCCATCCACAGATTGCTCCACCT...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGCTGCTATCCCTTTCATaGTCACACAGGCAGTGTGAG +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLLLSLS*SHRQCE
Trigger: CTCACACTGCCTGTGTGACCATGAAAGGGATAGCAG...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TTCATATGGTTGTCCCTTCTATGGGACTGCAAATCCTTCTGCTCCTTAGGTCCTCAGCTTCTGGTAGTGTaGCTAAAGCCACTGAAAGCA +
Preference number: 2 (lower is better)
Translates to: FIWLSLLWDCKSFCSLGPQLLVV*LKPLKA
Trigger: TGCTTTCAGTGGCTTTAGTCACACTACCAGAAGCTG...AGGACCTAAGGAGCAGAAGGATTTGCAGTCCCATAGAAGGGACAACCATATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TTCATATGGTTGTCCCTTCTATGGGACTGCAAATCCTTCTGCTCCTTAGGTCCTTTGAAGACCCAGAAATaGACCAACACACCTGTGGTC +
Preference number: 2 (lower is better)
Translates to: FIWLSLLWDCKSFCSLGPLKTQK*TNTPVV
Trigger: GACCACAGGTGTGTTGGTTCATTTCTGGGTCTTCAA...AGGACCTAAGGAGCAGAAGGATTTGCAGTCCCATAGAAGGGACAACCATATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGTTGAAGACCCAGAAATaGACCAACACACCTGTGGTC +
Preference number: 2 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQLKTQK*TNTPVV
Trigger: GACCACAGGTGTGTTGGTTCATTTCTGGGTCTTCAA...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGTTGAAGACCCAGAAATaGACCAACACACCTGTGGTC +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLLKTQK*TNTPVV
Trigger: GACCACAGGTGTGTTGGTTCATTTCTGGGTCTTCAA...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGTTACCTCACTTAGGATaGTATCCTGTAGATCCATCC +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLLPHLG*YPVDPS
Trigger: GGATGGATCTACAGGATATCATCCTAAGTGAGGTAA...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGCTCTCCTCCCATGGATaGCTGATTACACCATCTTCT +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLLSSHG*LITPSS
Trigger: AGAAGATGGTGTAATCAGTCATCCATGGGAGGAGAG...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGTCCAGGTTTCCCCTCTaGAAACCCCTTATCCTCTCC +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWSRFPL*KPLILS
Trigger: GGAGAGGATAAGGGGTTTTCAGAGGGGAAACCTGGA...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGGTCACACAGGCAGTGTaGGACATGGGATGCTTCTTG +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWVTQAV*DMGCFL
Trigger: CAAGAAGCATCCCATGTCTCACACTGCCTGTGTGAC...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGGTGGTTGTACCAGCTTaGAATCCCACCTACAGAGCA +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQVVVPA*NPTYRA
Trigger: TGCTCTGTAGGTGGGATTGCAAGCTGGTACAACCAC...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGAGTGAACACATACCATaGTTAACTTTCTGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLSEHIP*LTFWVW
Trigger: CCAGACCCAGAAAGTTAAGCATGGTATGTGTTCACT...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGTTGCCTCTGTGTCTGTaGCTCTGCACACATCATCAG +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQLPLCL*LCTHHQ
Trigger: CTGATGATGTGTGCAGAGGCACAGACACAGAGGCAA...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGATGCTGTCGAGGGTGTaGAGAAAGAGAAACACTCCT +
Preference number: 2 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQMLSRV*RKRNTP
Trigger: AGGAGTGTTTCTCTTTCTCCACACCCTCGACAGCAT...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp CCTACCTACCCACTCACACTTCTTGGCCCTGGCACTCCCCTTACTGGGACATATTCTAAGATCAAGAATTaGCAAATGGGACCTCATAAA +
Preference number: 2 (lower is better)
Translates to: PTYPLTLLGPGTPLTGTYSKIKN*QMGPHK
Trigger: TTTATGAGGTCCCATTTGCCAATTCTTGATCTTAGA...ATATGTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGTAGGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGCTGTGCTCTGTCCAATaGATGGCTGTGAGCATACTA +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLLCSVQ*MAVSIL
Trigger: TAGTATGCTCACAGCCATCCATTGGACAGAGCACAG...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 90 bp AAGTTTTGGGACTGGGTTGGTGATACAGTTCCACTACTGGAAGACTaGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCACCTGGAGT +
Preference number: 2 (lower is better)
Translates to: KFWDWVGDTVPLLED*PGYKRRRESFITWS
Trigger: ACTCCAGGTGATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAACTGTATCACCAACCCAGTCCCAAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTCAGCTTCTGGTAGTGTaGCTAAAGCCACTGAAAGCA +
Preference number: 2 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSQLLVV*LKPLKA
Trigger: TGCTTTCAGTGGCTTTAGTCACACTACCAGAAGCTG...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCTTGAAGACCCAGAAATaGACCAACACACCTGTGGTC +
Preference number: 2 (lower is better)
Translates to: VPLLEDLPGYKRRRESFILKTQK*TNTPVV
Trigger: GACCACAGGTGTGTTGGTTCATTTCTGGGTCTTCAA...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGGTGATAAAAACTGCATaGCATTGTTACACTGACAGG +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLVIKTA*HCYTDR
Trigger: CCTGTCAGTGTAACAATGTCATGCAGTTTTTATCAC...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGTTTCTAATGCTATCCTaGAAGCTCCCTATACCCTCC +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLFLMLS*KLPIPS
Trigger: GGAGGGTATAGGGAGCTTTCAGGATAGCATTAGAAA...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGCTCTCCTCCCATGGATaGCTGATTACACCATCTTCT +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQLSSHG*LITPSS
Trigger: AGAAGATGGTGTAATCAGTCATCCATGGGAGGAGAG...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGGACTGCAAATCCTTCTaGTCCTTAGGTCCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLDCKSF*SLGPFS
Trigger: AGAGAAAGGACCTAAGGAGCAGAAGGATTTGCAGTC...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGATCATCTGCTACATATaGATCTGGAGCCATGAGTCC +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLIICYI*IWSHES
Trigger: GGACTCATGGCTCCAGATGCATATGTAGCAGATGAT...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGATGCTGTCGAGGGTGTaGAGAAAGAGAAACACTCCT +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQMLSRV*RKRNTP
Trigger: AGGAGTGTTTCTCTTTCTCCACACCCTCGACAGCAT...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCATGCTGTCGAGGGTGTaGAGAAAGAGAAACACTCCT +
Preference number: 2 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIMLSRV*RKRNTP
Trigger: AGGAGTGTTTCTCTTTCTCCACACCCTCGACAGCAT...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTCACACTTCTTGGCCCTaGCACTCCCCTTACTGGGAC +
Preference number: 2 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPHTSWP*HSPYWD
Trigger: GTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTG...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGTTAACTTTCTGGGTCTaGGTTACCTCCTTCAGGTTG +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLLTFWV*VTSFRL
Trigger: CAACCTGAAGGAGGTAACCCAGACCCAGAAAGTTAA...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCGGAGCAATCTGTGGATaGCCTTTCCTTCAGTCTCTA +
Preference number: 2 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIGAICG*PFLQSL
Trigger: TAGAGACTGAAGGAAAGGCCATCCACAGATTGCTCC...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCTTGTTGTTCCTCATATaGGGCTCCAAACCCCTTCAG +
Preference number: 2 (lower is better)
Translates to: VPLLEDLPGYKRRRESFILLFLI*GSKPLQ
Trigger: CTGAAGGGGTTTGGAGCCCCATATGAGGAACAACAA...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCGGTTCTCTCCTCCCATaGATGACTGATTACACCATC +
Preference number: 2 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIGSLLP*MTDYTI
Trigger: GATGGTGTAATCAGTCATCCATGGGAGGAGAGAACC...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 90 bp TTTCTGGGGAACTACCAAACTGGTTTCCAGAGTGGTTGTACCAGCTaGCAATCCCACCTACAGAGCAATTGTGATAAAAACTGCATGACA +
Preference number: 2 (lower is better)
Translates to: FLGNYQTGFQSGCTS*QSHLQSNCDKNCMT
Trigger: TGTCATGCAGTTTTTATCACAATTGCTCTGTAGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAACCAGTTTGGTAGTTCCCCAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTAAATCAAAACAACCCTaGGATGACACCTCACACCAG +
Preference number: 2 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSKSKQP*DDTSHQ
Trigger: CTGGTGTGAGGTGTCATCTCAGGGTTGTTTTGATTT...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCAAATCAAAACAACCCTaGGATGACACCTCACACCAG +
Preference number: 2 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIKSKQP*DDTSHQ
Trigger: CTGGTGTGAGGTGTCATCTCAGGGTTGTTTTGATTT...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGGCATTTGTCAGAAACTaGAAGAGCTTCTTTGGAGAC +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLAFVRN*KSFFGD
Trigger: GTCTCCAAAGAAGCTCTTTCAGTTTCTGACAAATGC...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TTCATATGGTTGTCCCTTCTATGGGACTGCAAATCCTTCTGCTCCTTAGGTCCTGCATTTGTCAGAAACTaGAAGAGCTTCTTTGGAGAC +
Preference number: 2 (lower is better)
Translates to: FIWLSLLWDCKSFCSLGPAFVRN*KSFFGD
Trigger: GTCTCCAAAGAAGCTCTTTCAGTTTCTGACAAATGC...AGGACCTAAGGAGCAGAAGGATTTGCAGTCCCATAGAAGGGACAACCATATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTTTTCTAATGCTATCCTaGAAGCTCCCTATACCCTCC +
Preference number: 2 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSFLMLS*KLPIPS
Trigger: GGAGGGTATAGGGAGCTTTCAGGATAGCATTAGAAA...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGTGCCTAGTTCACATCTaGAATCTATTCCATGTCCCT +
Preference number: 2 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQCLVHI*NLFHVP
Trigger: AGGGACATGGAATAGATTTCAGATGTGAACTAGGCA...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGGGGACATATAAAGTTTaGAAGATCAAGGGTCCTCTC +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLGTYKV*KIKGPL
Trigger: GAGAGGACCCTTGATCTTGCAAACTTTATATGTCCC...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp TTCATATGGTTGTCCCTTCTATGGGACTGCAAATCCTTCTGCTCCTTAGGTCCTGGGACATATAAAGTTTaGAAGATCAAGGGTCCTCTC +
Preference number: 2 (lower is better)
Translates to: FIWLSLLWDCKSFCSLGPGTYKV*KIKGPL
Trigger: GAGAGGACCCTTGATCTTGCAAACTTTATATGTCCC...AGGACCTAAGGAGCAGAAGGATTTGCAGTCCCATAGAAGGGACAACCATATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTATCATCTGCTACATATaGATCTGGAGCCATGAGTCC +
Preference number: 2 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSIICYI*IWSHES
Trigger: GGACTCATGGCTCCAGATGCATATGTAGCAGATGAT...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGCCTCTTATCAGTGAGTaGATTTCATGTGTGTTCTTT +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLPLISE*ISCVFF
Trigger: AAAGAACACACATGAAATGCACTCACTGATAAGAGG...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGATCTTCTGCTTTATATaGAGCTGGAACCATGAGTCC +
Preference number: 2 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQIFCFI*SWNHES
Trigger: GGACTCATGGTTCCAGCTGCATATAAAGCAGAAGAT...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGATCTTCTGCTTTATATaGAGCTGGAACCATGAGTCC +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLIFCFI*SWNHES
Trigger: GGACTCATGGTTCCAGCTGCATATAAAGCAGAAGAT...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGAATGCCCCCAAATCCTaGCATCTCTTTAACACACTT +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLNAPKS*HLFNTL
Trigger: AAGTGTGTTAAAGAGATGGCAGGATTTGGGGGCATT...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGGTGGTTGTACAAGCTTaGAATCCCACCAGCAATGGA +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWVVVQA*NPTSNG
Trigger: TCCATTGCTGGTGGGATTGCAAGCTTGTACAACCAC...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TTCATATGGTTGTCCCTTCTATGGGACTGCAAATCCTTCTGCTCCTTAGGTCCTCCTTCTCCACATTCCTaGCACAATGAACTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: FIWLSLLWDCKSFCSLGPPSPHS*HNELFF
Trigger: AAAGAAGAGTTCATTGTGCCAGGAATGTGGAGAAGG...AGGACCTAAGGAGCAGAAGGATTTGCAGTCCCATAGAAGGGACAACCATATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTTGGTGGTTTAGTCCCTaGGAGCTCTGGGGCTTACTG +
Preference number: 2 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPWWFSP*ELWGLL
Trigger: CAGTAAGCCCCAGAGCTCCCAGGGACTAAACCACCA...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGAGTTGGAACATCTTCTaGGTATATGCCCAGGACAGG +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWSWNIF*VYAQDR
Trigger: CCTGTCCTGGGCATATACCCAGAAGATGTTCCAACT...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 90 bp TCGAGGGTGTGGAGAAAGAGAAACACTCCTCCATTGCTAGTGGGATaGCAAGCTGGTAAAAACACTTTGGAAATCAGATTGGTAGTTGTT +
Preference number: 2 (lower is better)
Translates to: SRVWRKRNTPPLLVG*QAGKNTLEIRLVVV
Trigger: AACAACTACCAATCTGATTTCCAAAGTGTTTTTACCAGCTTGCAATCCCACTAGCAATGGAGGAGTGTTTCTCTTTCTCCACACCCTCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 90 bp GGATCAATCTCTGAATGGTCATTCCCTCAGTCTCTAGTCCACACTTaGTCTTGTAACTCCTTCCATGGATATTTTGTTCCCCCTTCTAAG +
Preference number: 2 (lower is better)
Translates to: GSISEWSFPQSLVHT*SCNSFHGYFVPPSK
Trigger: CTTAGAAGGGGGAACAAAATATCCATGGAAGGAGTTACAAGACAAAGTGTGGACTAGAGACTGAGGGAATGACCATTCAGAGATTGATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGTCAACTGTGGAATACTaGATGAATGAGAAGCACCTA +
Preference number: 2 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQSTVEY*MNEKHL
Trigger: TAGGTGCTTCTCATTCATTCAGTATTCCACAGTTGA...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TTCATATGGTTGTCCCTTCTATGGGACTGCAAATCCTTCTGCTCCTTAGGTCCTTCAACTGTGGAATACTaGATGAATGAGAAGCACCTA +
Preference number: 2 (lower is better)
Translates to: FIWLSLLWDCKSFCSLGPSTVEY*MNEKHL
Trigger: TAGGTGCTTCTCATTCATTCAGTATTCCACAGTTGA...AGGACCTAAGGAGCAGAAGGATTTGCAGTCCCATAGAAGGGACAACCATATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGTCAACTGTGGAATACTaGATGAATGAGAAGCACCTA +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLSTVEY*MNEKHL
Trigger: TAGGTGCTTCTCATTCATTCAGTATTCCACAGTTGA...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGAAGCTCAAGTCCAAGTaGATCAAGGATCTCCATATA +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLKLKSK*IKDLHI
Trigger: TATATGGAGATCCTTGATTCACTTGGACTTGAGCTT...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGGTGATAAAAACTGCATaGCATTGTTACACTGACAGG +
Preference number: 2 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQVIKTA*HCYTDR
Trigger: CCTGTCAGTGTAACAATGTCATGCAGTTTTTATCAC...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTGCATTTGTCAGAAACTaGAAGAGCTTCTTTGGAGAC +
Preference number: 2 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSAFVRN*KSFFGD
Trigger: GTCTCCAAAGAAGCTCTTTCAGTTTCTGACAAATGC...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTTTACCTCACTTAGGATaGTATCCTGTAGATCCATCC +
Preference number: 2 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSLPHLG*YPVDPS
Trigger: GGATGGATCTACAGGATATCATCCTAAGTGAGGTAA...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGAGTGTCTGGGTTTGGTaGTTGTATATGAGATGGATG +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQSVWVW*LYMRWM
Trigger: CATCCATCTCATATACAATCACCAAACCCAGACACT...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGTGCCTAGTTCACATCTaGAATCTATTCCATGTCCCT +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQCLVHI*NLFHVP
Trigger: AGGGACATGGAATAGATTTCAGATGTGAACTAGGCA...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp CATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACTGGTGGTTGTACCAGCTTaGAATCCCACCTACAGAGCA +
Preference number: 2 (lower is better)
Translates to: HLEFHVVCELYLGYSKLLVVVPA*NPTYRA
Trigger: TGCTCTGTAGGTGGGATTGCAAGCTGGTACAACCAC...CAGTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTGGGACATATAAAGTTTaGAAGATCAAGGGTCCTCTC +
Preference number: 2 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSGTYKV*KIKGPL
Trigger: GAGAGGACCCTTGATCTTGCAAACTTTATATGTCCC...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGAGTGAACACATACCATaGTTAACTTTCTGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQSEHIP*LTFWVW
Trigger: CCAGACCCAGAAAGTTAAGCATGGTATGTGTTCACT...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGATCTTCTGCTTTATATaGAGCTGGAACCATGAGTCC +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQIFCFI*SWNHES
Trigger: GGACTCATGGTTCCAGCTGCATATAAAGCAGAAGAT...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGGATTACACCATCTTCTaGTTTATATGCAGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQDYTIF*FICSWN
Trigger: GTTCCAGCTGCATATAAAGCAGAAGATGGTGTAATC...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGGATTACACCATCTTCTaGTTTATATGCAGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLDYTIF*FICSWN
Trigger: GTTCCAGCTGCATATAAAGCAGAAGATGGTGTAATC...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGAATGCCCCCAAATCCTaGCATCTCTTTAACACACTT +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQNAPKS*HLFNTL
Trigger: AAGTGTGTTAAAGAGATGGCAGGATTTGGGGGCATT...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTCCTTCTCCACATTCCTaGCACAATGAACTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSPSPHS*HNELFF
Trigger: AAAGAAGAGTTCATTGTGCCAGGAATGTGGAGAAGG...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGGGATATAGGAAAATGTaGTGCATTGGAAAATTCATG +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLGYRKM*CIGKFM
Trigger: CATGAATTTTCCAATGCACCACATTTTCCTATATCC...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGGTGTTCTTTTGTGATTaGGTTACCTCACTTAGGATG +
Preference number: 2 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQVFFCD*VTSLRM
Trigger: CATCCTAAGTGAGGTAACCCAATCACAAAAGAACAC...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGGTGTTCTTTTGTGATTaGGTTACCTCACTTAGGATG +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLVFFCD*VTSLRM
Trigger: CATCCTAAGTGAGGTAACCCAATCACAAAAGAACAC...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGGGTATTGCAATTTTCTaGGCTAATATCCTCTTATCA +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLGIAIF*ANILLS
Trigger: TGATAAGAGGATATTAGCCCAGAAAATTGCAATACC...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGAAAGAATCCACATTTTaGTCTTCCTTCATCTTGAGT +
Preference number: 2 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLKESTF*SSFILS
Trigger: ACTCAAGATGAAGGAAGACCAAAATGTGGATTCTTT...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp CTTCCCAACGAGTACATACACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTGATCAAAAACTAAGGTaGCATCAGATGCTGTCGAGG +
Preference number: 2 (lower is better)
Translates to: LPNEYIHFCICQKLKELLDQKLR*HQMLSR
Trigger: CCTCGACAGCATCTGATGTCACCTTAGTTTTTGATC...AAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGGGAATACTGAATGAATaGGAAGCACCTAAAGAAATG +
Preference number: 2 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQGILNE*EAPKEM
Trigger: CATTTCTTTAGGTGCTTCTCATTCATTCAGTATTCC...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCTCAACTGTGGAATACTaGATGAATGAGAAGCACCTA +
Preference number: 2 (lower is better)
Translates to: VPLLEDLPGYKRRRESFISTVEY*MNEKHL
Trigger: TAGGTGCTTCTCATTCATTCAGTATTCCACAGTTGA...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTAAGCTCAAGTCCAAGTaGATCAAGGATCTCCATATA +
Preference number: 2 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSKLKSK*IKDLHI
Trigger: TATATGGAGATCCTTGATTCACTTGGACTTGAGCTT...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGGTGATAAAAACTGCATaGCATTGTTACACTGACAGG +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQVIKTA*HCYTDR
Trigger: CCTGTCAGTGTAACAATGTCATGCAGTTTTTATCAC...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGGGGACATATAAAGTTTaGAAGATCAAGGGTCCTCTC +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWGTYKV*KIKGPL
Trigger: GAGAGGACCCTTGATCTTGCAAACTTTATATGTCCC...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGCCTCTTATCAGTGAGTaGATTTCATGTGTGTTCTTT +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLPLISE*ISCVFF
Trigger: AAAGAACACACATGAAATGCACTCACTGATAAGAGG...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGATCTTCTGCTTTATATaGAGCTGGAACCATGAGTCC +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWIFCFI*SWNHES
Trigger: GGACTCATGGTTCCAGCTGCATATAAAGCAGAAGAT...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGGATTACACCATCTTCTaGTTTATATGCAGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQDYTIF*FICSWN
Trigger: GTTCCAGCTGCATATAAAGCAGAAGATGGTGTAATC...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCGATTACACCATCTTCTaGTTTATATGCAGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIDYTIF*FICSWN
Trigger: GTTCCAGCTGCATATAAAGCAGAAGATGGTGTAATC...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGTATCTCTGGACTATCTaGTATCCCTTTCATGGTCAC +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWYLWTI*YPFHGH
Trigger: GTGACCATGAAAGGGATAGCAGATAGTCCAGAGATA...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp CATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACTGATGCTGTCGAGGGTGTaGAGAAAGAGAAACACTCCT +
Preference number: 2 (lower is better)
Translates to: HLEFHVVCELYLGYSKLLMLSRV*RKRNTP
Trigger: AGGAGTGTTTCTCTTTCTCCACACCCTCGACAGCAT...CAGTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTGTGTTCTTTTGTGATTaGGTTACCTCACTTAGGATG +
Preference number: 2 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSVFFCD*VTSLRM
Trigger: CATCCTAAGTGAGGTAACCCAATCACAAAAGAACAC...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGGTGTTCTTTTGTGATTaGGTTACCTCACTTAGGATG +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQVFFCD*VTSLRM
Trigger: CATCCTAAGTGAGGTAACCCAATCACAAAAGAACAC...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGTCTAGGAGTACTGGTTaGTTTATATTGTTGTTCCTC +
Preference number: 2 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQSRSTG*FILLFL
Trigger: GAGGAACAACAATATAAACCAACCAGTACTCCTAGA...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGATACAGTTCCACTACTaGAAGACTTGCCTGGTTACA +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWIQFHY*KTCLVT
Trigger: TGTAACCAGGCAAGTCTTCCAGTAGTGGAACTGTAT...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp CATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACTGAAATCAAAACAACCCTaGGATGACACCTCACACCAG +
Preference number: 2 (lower is better)
Translates to: HLEFHVVCELYLGYSKLLKSKQP*DDTSHQ
Trigger: CTGGTGTGAGGTGTCATCTCAGGGTTGTTTTGATTT...CAGTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCGGAATACTGAATGAATaGGAAGCACCTAAAGAAATG +
Preference number: 2 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIGILNE*EAPKEM
Trigger: CATTTCTTTAGGTGCTTCTCATTCATTCAGTATTCC...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTGGAATACTGAATGAATaGGAAGCACCTAAAGAAATG +
Preference number: 2 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSGILNE*EAPKEM
Trigger: CATTTCTTTAGGTGCTTCTCATTCATTCAGTATTCC...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGAAGCTCAAGTCCAAGTaGATCAAGGATCTCCATATA +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWKLKSK*IKDLHI
Trigger: TATATGGAGATCCTTGATTCACTTGGACTTGAGCTT...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGGTTTCATGTGGTTTGTaGATTGTATCTTGGGTATTC +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQVSCGL*IVSWVF
Trigger: GAATACCCAAGATACAATTCACAAACCACATGAAAC...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTGTTTCATGTGGTTTGTaGATTGTATCTTGGGTATTC +
Preference number: 2 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSVSCGL*IVSWVF
Trigger: GAATACCCAAGATACAATTCACAAACCACATGAAAC...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCGTTTCATGTGGTTTGTaGATTGTATCTTGGGTATTC +
Preference number: 2 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIVSCGL*IVSWVF
Trigger: GAATACCCAAGATACAATTCACAAACCACATGAAAC...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGTTCTGCACTGTAGCATaGTTATCTGTTACTAAACAG +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQFCTVA*LSVTKQ
Trigger: CTGTTTAGTAACAGATAATCATGCTACAGTGCAGAA...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGCTTGGTCCTTCTGCATaGACAAAAATTGGTCTTAAC +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWLGPSA*TKIGLN
Trigger: GTTAAGACCAATTTTTGTTCATGCAGAAGGACCAAG...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGCCTCTTATCAGTGAGTaGATTTCATGTGTGTTCTTT +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQPLISE*ISCVFF
Trigger: AAAGAACACACATGAAATGCACTCACTGATAAGAGG...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGGATTACACCATCTTCTaGTTTATATGCAGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWDYTIF*FICSWN
Trigger: GTTCCAGCTGCATATAAAGCAGAAGATGGTGTAATC...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp CTTCCCAACGAGTACATACACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTCCTTCTCCACATTCCTaGCACAATGAACTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: LPNEYIHFCICQKLKELLPSPHS*HNELFF
Trigger: AAAGAAGAGTTCATTGTGCCAGGAATGTGGAGAAGG...AAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGGGATATAGGAAAATGTaGTGCATTGGAAAATTCATG +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLGYRKM*CIGKFM
Trigger: CATGAATTTTCCAATGCACCACATTTTCCTATATCC...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACATGCTGTCGAGGGTGTaGAGAAAGAGAAACACTCCT +
Preference number: 2 (lower is better)
Translates to: FILSFMWFVNCILGIPSYMLSRV*RKRNTP
Trigger: AGGAGTGTTTCTCTTTCTCCACACCCTCGACAGCAT...GTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGTCACACCAGTCAGAATaGCTAAGATCAAAAACTAAG +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQSHQSE*LRSKTK
Trigger: CTTAGTTTTTGATCTTAGCCATTCTGACTGGTGTGA...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTTCACACCAGTCAGAATaGCTAAGATCAAAAACTAAG +
Preference number: 2 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSSHQSE*LRSKTK
Trigger: CTTAGTTTTTGATCTTAGCCATTCTGACTGGTGTGA...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGGTGTTCTTTTGTGATTaGGTTACCTCACTTAGGATG +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWVFFCD*VTSLRM
Trigger: CATCCTAAGTGAGGTAACCCAATCACAAAAGAACAC...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGGGTATTGCAATTTTCTaGGCTAATATCCTCTTATCA +
Preference number: 2 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLGIAIF*ANILLS
Trigger: TGATAAGAGGATATTAGCCCAGAAAATTGCAATACC...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGTCTAGGAGTACTGGTTaGTTTATATTGTTGTTCCTC +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQSRSTG*FILLFL
Trigger: GAGGAACAACAATATAAACCAACCAGTACTCCTAGA...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGCAATCCCACCAGCAATaGAAGATTGTTCCTATTTCT +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWQSHQQ*KIVPIS
Trigger: AGAAATAGGAACAATCTTCCATTGCTGGTGGGATTG...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATCAGCTTCTGGTAGTGTaGCTAAAGCCACTGAAAGCA +
Preference number: 2 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYQLLVV*LKPLKA
Trigger: TGCTTTCAGTGGCTTTAGTCACACTACCAGAAGCTG...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp CTTCCCAACGAGTACATACACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTAAGCTCAAGTCCAAGTaGATCAAGGATCTCCATATA +
Preference number: 2 (lower is better)
Translates to: LPNEYIHFCICQKLKELLKLKSK*IKDLHI
Trigger: TATATGGAGATCCTTGATTCACTTGGACTTGAGCTT...AAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTTGAAGACCCAGAAATaGACCAACACACCTGTGGTC +
Preference number: 2 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYLKTQK*TNTPVV
Trigger: GACCACAGGTGTGTTGGTTCATTTCTGGGTCTTCAA...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTTTTCTAATGCTATCCTaGAAGCTCCCTATACCCTCC +
Preference number: 2 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPFLMLS*KLPIPS
Trigger: GGAGGGTATAGGGAGCTTTCAGGATAGCATTAGAAA...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGTTCTGCACTGTAGCATaGTTATCTGTTACTAAACAG +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWFCTVA*LSVTKQ
Trigger: CTGTTTAGTAACAGATAATCATGCTACAGTGCAGAA...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTGACTGCAAATCCTTCTaGTCCTTAGGTCCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPDCKSF*SLGPFS
Trigger: AGAGAAAGGACCTAAGGAGCAGAAGGATTTGCAGTC...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR GCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGGTAACTTGGTCCTTCTaGATGAACAAAAATTGGTCT +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWVTWSF*MNKNWS
Trigger: AGACCAATTTTTGTTCATGCAGAAGGACCAAGTTAC...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGTCACACCAGTCAGAATaGCTAAGATCAAAAACTAAG +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWSHQSE*LRSKTK
Trigger: CTTAGTTTTTGATCTTAGCCATTCTGACTGGTGTGA...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTTCTAAGATCAAGAATTaGCAAATGGGACCTCATAAA +
Preference number: 2 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSSKIKN*QMGPHK
Trigger: TTTATGAGGTCCCATTTGCCAATTCTTGATCTTAGA...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGTCTAAGATCAAGAATTaGCAAATGGGACCTCATAAA +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQSKIKN*QMGPHK
Trigger: TTTATGAGGTCCCATTTGCCAATTCTTGATCTTAGA...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCTCTAAGATCAAGAATTaGCAAATGGGACCTCATAAA +
Preference number: 2 (lower is better)
Translates to: VPLLEDLPGYKRRRESFISKIKN*QMGPHK
Trigger: TTTATGAGGTCCCATTTGCCAATTCTTGATCTTAGA...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCGGTATTGCAATTTTCTaGGCTAATATCCTCTTATCA +
Preference number: 2 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIGIAIF*ANILLS
Trigger: TGATAAGAGGATATTAGCCCAGAAAATTGCAATACC...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGGGTATTGCAATTTTCTaGGCTAATATCCTCTTATCA +
Preference number: 2 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQGIAIF*ANILLS
Trigger: TGATAAGAGGATATTAGCCCAGAAAATTGCAATACC...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGATGTGTTTTGTCCAATaGATAGAAGTGAGTATCCAG +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWMCFVQ*IEVSIQ
Trigger: CTGGATACTCACTTCTATCCATTGGACAAAACACAT...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TTGATCCATTTTTATCTCCGTGTACAAAGCTCAAGTCCAAGTGAATCAAGGATCTCAACTGTGGAATACTaGATGAATGAGAAGCACCTA +
Preference number: 2 (lower is better)
Translates to: LIHFYLRVQSSSPSESRISTVEY*MNEKHL
Trigger: TAGGTGCTTCTCATTCATTCAGTATTCCACAGTTGA...GATCCTTGATTCACTTGGACTTGAGCTTTGTACACGGAGATAAAAATGGATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp CTTCCCAACGAGTACATACACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTGTTTCATGTGGTTTGTaGATTGTATCTTGGGTATTC +
Preference number: 2 (lower is better)
Translates to: LPNEYIHFCICQKLKELLVSCGL*IVSWVF
Trigger: GAATACCCAAGATACAATTCACAAACCACATGAAAC...AAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp CTTCCCAACGAGTACATACACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTTCACACCAGTCAGAATaGCTAAGATCAAAAACTAAG +
Preference number: 2 (lower is better)
Translates to: LPNEYIHFCICQKLKELLSHQSE*LRSKTK
Trigger: CTTAGTTTTTGATCTTAGCCATTCTGACTGGTGTGA...AAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGGGTATTGCAATTTTCTaGGCTAATATCCTCTTATCA +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWGIAIF*ANILLS
Trigger: TGATAAGAGGATATTAGCCCAGAAAATTGCAATACC...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGGCATTTATTACCAGTTaGAACATCTTCTGGGTATAT +
Preference number: 2 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWAFITS*NIFWVY
Trigger: ATATACCCAGAAGATGTTCCAACTGGTAATAAATGC...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACTCAACTGTGGAATACTaGATGAATGAGAAGCACCTA +
Preference number: 2 (lower is better)
Translates to: FILSFMWFVNCILGIPSYSTVEY*MNEKHL
Trigger: TAGGTGCTTCTCATTCATTCAGTATTCCACAGTTGA...GTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTAAGCTCAAGTCCAAGTaGATCAAGGATCTCCATATA +
Preference number: 2 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPKLKSK*IKDLHI
Trigger: TATATGGAGATCCTTGATTCACTTGGACTTGAGCTT...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTGTGATAAAAACTGCATaGCATTGTTACACTGACAGG +
Preference number: 2 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPVIKTA*HCYTDR
Trigger: CCTGTCAGTGTAACAATGTCATGCAGTTTTTATCAC...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATCCTTCTCCACATTCCTaGCACAATGAACTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYPSPHS*HNELFF
Trigger: AAAGAAGAGTTCATTGTGCCAGGAATGTGGAGAAGG...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp CTTCCCAACGAGTACATACACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTGGATATAGGAAAATGTaGTGCATTGGAAAATTCATG +
Preference number: 2 (lower is better)
Translates to: LPNEYIHFCICQKLKELLGYRKM*CIGKFM
Trigger: CATGAATTTTCCAATGCACCACATTTTCCTATATCC...AAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp CTTCCCAACGAGTACATACACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTTCTAAGATCAAGAATTaGCAAATGGGACCTCATAAA +
Preference number: 2 (lower is better)
Translates to: LPNEYIHFCICQKLKELLSKIKN*QMGPHK
Trigger: TTTATGAGGTCCCATTTGCCAATTCTTGATCTTAGA...AAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 90 bp TTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTaGGGTATTCCAAGCTACTGGGCTAATATTCTATTATCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: LSSFILSFMWFVNCI*GIPSYWANILLSVS
Trigger: ACTCACTGATAATAGAATATTAGCCCAGTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTGGAATACTGAATGAATaGGAAGCACCTAAAGAAATG +
Preference number: 2 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPGILNE*EAPKEM
Trigger: CATTTCTTTAGGTGCTTCTCATTCATTCAGTATTCC...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCAACTGTGGAATACTaGATGAATGAGAAGCACCTA +
Preference number: 2 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYSTVEY*MNEKHL
Trigger: TAGGTGCTTCTCATTCATTCAGTATTCCACAGTTGA...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp CATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACTGGGATATAGGAAAATGTaGTGCATTGGAAAATTCATG +
Preference number: 2 (lower is better)
Translates to: HLEFHVVCELYLGYSKLLGYRKM*CIGKFM
Trigger: CATGAATTTTCCAATGCACCACATTTTCCTATATCC...CAGTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR TCA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATGGAATACTGAATGAATaGGAAGCACCTAAAGAAATG +
Preference number: 2 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYGILNE*EAPKEM
Trigger: CATTTCTTTAGGTGCTTCTCATTCATTCAGTATTCC...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCACACCAGTCAGAATaGCTAAGATCAAAAACTAAG +
Preference number: 2 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYSHQSE*LRSKTK
Trigger: CTTAGTTTTTGATCTTAGCCATTCTGACTGGTGTGA...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTTCTAAGATCAAGAATTaGCAAATGGGACCTCATAAA +
Preference number: 2 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPSKIKN*QMGPHK
Trigger: TTTATGAGGTCCCATTTGCCAATTCTTGATCTTAGA...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATGGATATAGGAAAATGTaGTGCATTGGAAAATTCATG +
Preference number: 2 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYGYRKM*CIGKFM
Trigger: CATGAATTTTCCAATGCACCACATTTTCCTATATCC...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CCA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCTAAGATCAAGAATTaGCAAATGGGACCTCATAAA +
Preference number: 2 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYSKIKN*QMGPHK
Trigger: TTTATGAGGTCCCATTTGCCAATTCTTGATCTTAGA...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR GCA 72 bp GCTATCCTGAAAGCTCCCTATACCCTCCCCATGCCCTaGTCCCCTACCTACCCACTCACACTTCTTGGCCCT +
Preference number: 3 (lower is better)
Translates to: AILKAPYTLPMP*SPTYPLTLLGP
Trigger: AGGGCCAAGAAGTGTGAGTGGGTAGGTAGGGGAGCAGGGCATGGGGAGGGTATAGGGAGCTTTCAGGATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp CCTACCTACCCACTCACACTTCTTGGCCCTGGCACTCCCCTTACTGGGACATATGTATCCAGTCCTCAGTaGAGGTACATCTGGGTTTTT +
Preference number: 3 (lower is better)
Translates to: PTYPLTLLGPGTPLTGTYVSSPQ*RYIWVF
Trigger: AAAAACCCAGATGTACCTCAACTGAGGACTGGATAC...ATATGTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGTAGGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGACCCACTCACACTTCTaGGCCCTGGCACTCCCCTTA +
Preference number: 3 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLTHSHF*ALALPL
Trigger: TAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGT...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp GTTGGTGGTTTAGTCCCTGGGAGCTCTGGGGCTTACTaGTTAGTTCATATGGTTGTCCCTTCTATGGGACTG +
Preference number: 3 (lower is better)
Translates to: VGGLVPGSSGAY*LVHMVVPSMGL
Trigger: CAGTCCCATAGAAGGGACAACCATATGAACTAACCAGTAAGCCCCAGAGCTCCCAGGGACTAAACCACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGTGGTTTCCAGAGTGGTaGTACCAGCTTGCAATCCCA +
Preference number: 3 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLWFPEW*YQLAIP
Trigger: TGGGATTGCAAGCTGGTACAACCACTCTGGAAACCA...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTACCCACTCACACTTCTaGGCCCTGGCACTCCCCTTA +
Preference number: 3 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSTHSHF*ALALPL
Trigger: TAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGT...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGACCCACTCACACTTCTaGGCCCTGGCACTCCCCTTA +
Preference number: 3 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQTHSHF*ALALPL
Trigger: TAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGT...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGAGCTGTGAGCCACCATaGCCCCCAGCAAACCTTGAA +
Preference number: 3 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQSCEPP*PPANLE
Trigger: TTCAAGGTTTGCTGGGGGCAATGGTGGCTCACAGCT...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp CCACCATGTGTACTCTATGGTTGGTGGTTTAGTCCCTaGGAGCTCTGGGGCTTACTGGTTAGTTCATATGGT +
Preference number: 3 (lower is better)
Translates to: PPCVLYGWWFSP*ELWGLLVSSYG
Trigger: ACCATATGAACTAACCAGTAAGCCCCAGAGCTCCCAGGGACTAAACCACCAACCATAGAGTACACATGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGACCCACTCACACTTCTaGGCCCTGGCACTCCCCTTA +
Preference number: 3 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWTHSHF*ALALPL
Trigger: TAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGT...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGTTCCTGGTTTCACCTTaGAAACACCACTTTCCCCTC +
Preference number: 3 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLFLVSP*KHHFPL
Trigger: GAGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAA...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR TCA 72 bp GCATCTGCAATAGTGTCTGGGTTTGGTGATTGTATATaGGATGGATGCCCAGGTGGAGCAATCTGTGGATGG +
Preference number: 3 (lower is better)
Translates to: ASAIVSGFGDCI*DGCPGGAICGW
Trigger: CCATCCACAGATTGCTCCACCTGGGCATCCATCTCATATACAATCACCAAACCCAGACACTATTGCAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR GCA 72 bp ACTAGGGACACCCTCACAAATTCAGAAAGTTACCACTaGACTACATTTCCACCCCACACTTCAAATGCCCCC +
Preference number: 3 (lower is better)
Translates to: TRDTLTNSESYH*TTFPPHTSNAP
Trigger: GGGGGCATTTGAAGTGTGGGGTGGAAATGTAGTGCAGTGGTAACTTTCTGAATTTGTGAGGGTGTCCCTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR GCA 72 bp ACCGCCGGACTGACTTCCAGAGTGGTTGTACAAGCTTaGAATCCCACCAGCAATGGAAGATTGTTCCTATTT +
Preference number: 3 (lower is better)
Translates to: TAGLTSRVVVQA*NPTSNGRLFLF
Trigger: AAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAGTCAGTCCGGCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGTGGTTTCCAGAGTGGTaGTACCAGCTTGCAATCCCA +
Preference number: 3 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQWFPEW*YQLAIP
Trigger: TGGGATTGCAAGCTGGTACAACCACTCTGGAAACCA...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp CCTACCTACCCACTCACACTTCTTGGCCCTGGCACTCCCCTTACTGGGACATATTCAAAGTATCCAGTTTaGTCTTCCTTCATCTTGAGT +
Preference number: 3 (lower is better)
Translates to: PTYPLTLLGPGTPLTGTYSKYPV*SSFILS
Trigger: ACTCAAGATGAAGGAAGACAAAACTGGATACTTTGA...ATATGTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGTAGGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGTGGTTTCCAGAGTGGTaGTACCAGCTTGCAATCCCA +
Preference number: 3 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQWFPEW*YQLAIP
Trigger: TGGGATTGCAAGCTGGTACAACCACTCTGGAAACCA...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGTATCCAGTTCTGTATTaGTCAGGTACTGGCAGAGCC +
Preference number: 3 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLYPVLY*SGTGRA
Trigger: GGCTCTGCCAGTACCTGACAAATACAGAACTGGATA...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR GCA 72 bp TCTCTCCTCCCATGGATGACTGATTACACCATCTTCTaGTTTATATGCAGCTGGAACCATGAGTCCTACCGT +
Preference number: 3 (lower is better)
Translates to: SLLPWMTDYTIF*FICSWNHESYR
Trigger: ACGGTAGGACTCATGGTTCCAGCTGCATATAAAGCAGAAGATGGTGTAATCAGTCATCCATGGGAGGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp CTATCCCTTTCATGGTCACACAGGCAGTGTGAGACATaGGATGCTTCTTGTGTGAGCATCAAATTAGACCAG +
Preference number: 3 (lower is better)
Translates to: LSLSWSHRQCET*DASCVSIKLDQ
Trigger: CTGGTCTAATTTGATGCTCACACAAGAAGCATCCCATGTCTCACACTGCCTGTGTGACCATGAAAGGGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGGCTAATACATCTGCATaGTTATACTCACACAGAGGA +
Preference number: 3 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLANTSA*LYSHRG
Trigger: TCCTCTGTGTGAGTATAACAATGCAGATGTATTAGC...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGCCATTGCTAGTGGGATaGCAAGCTGGTAAAAACACT +
Preference number: 3 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLPLLVG*QAGKNT
Trigger: AGTGTTTTTACCAGCTTGCAATCCCACTAGCAATGG...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGCCATTGCTAGTGGGATaGCAAGCTGGTAAAAACACT +
Preference number: 3 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQPLLVG*QAGKNT
Trigger: AGTGTTTTTACCAGCTTGCAATCCCACTAGCAATGG...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGGTATCCAGTCCTCAGTaGAGGTACATCTGGGTTTTT +
Preference number: 3 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLVSSPQ*RYIWVF
Trigger: AAAAACCCAGATGTACCTCAACTGAGGACTGGATAC...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGCATACACTTCTGCATTaGTCAGAAACTGAAAGAGCT +
Preference number: 3 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLHTLLH*SETERA
Trigger: AGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATG...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGTTCCTGGTTTCACCTTaGAAACACCACTTTCCCCTC +
Preference number: 3 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQFLVSP*KHHFPL
Trigger: GAGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAA...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCTATCCAGTTCTGTATTaGTCAGGTACTGGCAGAGCC +
Preference number: 3 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIYPVLY*SGTGRA
Trigger: GGCTCTGCCAGTACCTGACAAATACAGAACTGGATA...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGTGTTTCTTAGCCTGTTaGGGTTTCTGCACTGTAGCA +
Preference number: 3 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLCFLAC*GFCTVA
Trigger: TGCTACAGTGCAGAAACCCAAACAGGCTAAGAAACA...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGTGTTTCTTAGCCTGTTaGGGTTTCTGCACTGTAGCA +
Preference number: 3 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQCFLAC*GFCTVA
Trigger: TGCTACAGTGCAGAAACCCAAACAGGCTAAGAAACA...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGCCACTACTGGAAGACTaGCCTGGTTACAAAAGAAGG +
Preference number: 3 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQPLLED*PGYKRR
Trigger: CCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGG...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR TCA 72 bp GAACTTGTTGGCATCTGCAATAGTGTCTGGGTTTGGTaGTTGTATATGAGATGGATGCCCAGGTGGAGCAAT +
Preference number: 3 (lower is better)
Translates to: ELVGICNSVWVW*LYMRWMPRWSN
Trigger: ATTGCTCCACCTGGGCATCCATCTCATATACAATCACCAAACCCAGACACTATTGCAGATGCCAACAAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR TCA 72 bp CTATCTGCTATCCCTTTCATGGTCACACAGGCAGTGTaGGACATGGGATGCTTCTTGTGTGAGCATCAAATT +
Preference number: 3 (lower is better)
Translates to: LSAIPFMVTQAV*DMGCFLCEHQI
Trigger: AATTTGATGCTCACACAAGAAGCATCCCATGTCTCACACTGCCTGTGTGACCATGAAAGGGATAGCAGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR GCA 72 bp CCATGGATGACTGATTACACCATCTTCTGCTTTATATaGAGCTGGAACCATGAGTCCTACCGTGTGTACTCT +
Preference number: 3 (lower is better)
Translates to: PWMTDYTIFCFI*SWNHESYRVYS
Trigger: AGAGTACACACGGTAGGACTCATGGTTCCAGCTGCATATAAAGCAGAAGATGGTGTAATCAGTCATCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR GCA 72 bp ACATTTCCACCCCACACTTCAAATGCCCCCAAATCCTaGCATCTCTTTAACACACTTTCTCTCTCTCTCCAT +
Preference number: 3 (lower is better)
Translates to: TFPPHTSNAPKS*HLFNTLSLSLH
Trigger: ATGGAGAGAGAGAGAAAGTGTGTTAAAGAGATGGCAGGATTTGGGGGCATTTGAAGTGTGGGGTGGAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp ATATGGGACAGATCCTCAGGTGGATCAATCTCTGAATaGTCATTCCCTCAGTCTCTAGTCCACACTTTGTCT +
Preference number: 3 (lower is better)
Translates to: IWDRSSGGSISE*SFPQSLVHTLS
Trigger: AGACAAAGTGTGGACTAGAGACTGAGGGAATGACCATTCAGAGATTGATCCACCTGAGGATCTGTCCCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp GCATCCAAAATAGCGTCTGGGTTTGGTGATTGTATATaGGACAGATCCTCAGGTGGATCAATCTCTGAATGG +
Preference number: 3 (lower is better)
Translates to: ASKIASGFGDCI*DRSSGGSISEW
Trigger: CCATTCAGAGATTGATCCACCTGAGGATCTGTCCCATATACAATCACCAAACCCAGACGCTATTTTGGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp AGTGGTTTAGGCCCTGGGAACTCTAGGAGTACTGGTTaGTTTATATTGTTGTTCCTCATATGGGGCTCCAAA +
Preference number: 3 (lower is better)
Translates to: SGLGPGNSRSTG*FILLFLIWGSK
Trigger: TTTGGAGCCCCATATGAGGAACAACAATATAAACCAACCAGTACTCCTAGAGTTCCCAGGGCCTAAACCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGATAACAAACATGGTTTaGTTTAGACAGCTCAGAAGG +
Preference number: 3 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLITNMV*FRQLRR
Trigger: CCTTCTGAGCTGTCTAAACAAAACCATGTTTGTTAT...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGCCATTGCTAGTGGGATaGCAAGCTGGTAAAAACACT +
Preference number: 3 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQPLLVG*QAGKNT
Trigger: AGTGTTTTTACCAGCTTGCAATCCCACTAGCAATGG...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCCCATTGCTAGTGGGATaGCAAGCTGGTAAAAACACT +
Preference number: 3 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIPLLVG*QAGKNT
Trigger: AGTGTTTTTACCAGCTTGCAATCCCACTAGCAATGG...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp CTTCCCAACGAGTACATACACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTTGGTTTCCAGAGTGGTaGTACCAGCTTGCAATCCCA +
Preference number: 3 (lower is better)
Translates to: LPNEYIHFCICQKLKELLWFPEW*YQLAIP
Trigger: TGGGATTGCAAGCTGGTACAACCACTCTGGAAACCA...AAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTGTATCCAGTCCTCAGTaGAGGTACATCTGGGTTTTT +
Preference number: 3 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSVSSPQ*RYIWVF
Trigger: AAAAACCCAGATGTACCTCAACTGAGGACTGGATAC...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGGTGAGTAGTACTCCATaGTGTAAATGTACCACATTT +
Preference number: 3 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLVSSTP*CKCTTF
Trigger: AAATGTGGTACATTTACACAATGGAGTACTACTCAC...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGTTCCTGGTTTCACCTTaGAAACACCACTTTCCCCTC +
Preference number: 3 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWFLVSP*KHHFPL
Trigger: GAGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAA...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGCATATGGTGTATGAATaGCATCTTGGGTATTGCAAT +
Preference number: 3 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLHMVYE*HLGYCN
Trigger: ATTGCAATACCCAAGATGCAATTCATACACCATATG...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGTATCCAGTTCTGTATTaGTCAGGTACTGGCAGAGCC +
Preference number: 3 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWYPVLY*SGTGRA
Trigger: GGCTCTGCCAGTACCTGACAAATACAGAACTGGATA...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGACTGGTTGGTTTATATaGTTGTTCCTCATATGGGGC +
Preference number: 3 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLTGWFI*LFLIWG
Trigger: GCCCCATATGAGGAACAACAATATAAACCAACCAGT...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGCCCACCCTACCTTGCTaGATAATTTACTCTTCCCTT +
Preference number: 3 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQPTLPC*IIYSSL
Trigger: AAGGGAAGAGTAAATTATCAAGCAAGGTAGGGTGGG...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGGATCATTACCTAATGTaGCCTCTGTGTCTGTGCCTC +
Preference number: 3 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWDHYLM*PLCLCL
Trigger: GAGGCACAGACACAGAGGCAACATTAGGTAATGATC...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR TCA 72 bp TTGTATATGGGACAGATCCTCAGGTGGATCAATCTCTaGATGGTCATTCCCTCAGTCTCTAGTCCACACTTT +
Preference number: 3 (lower is better)
Translates to: LYMGQILRWINL*MVIPSVSSPHF
Trigger: AAAGTGTGGACTAGAGACTGAGGGAATGACCATTCAGAGATTGATCCACCTGAGGATCTGTCCCATATACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR TCA 72 bp AGCCTTAACAGGACTAAGGTTCTCTCCTCCCATGGATaGCTGATTACACCATCTTCTGCTTTATATGCAGCT +
Preference number: 3 (lower is better)
Translates to: SLNRTKVLSSHG*LITPSSALYAA
Trigger: AGCTGCATATAAAGCAGAAGATGGTGTAATCAGTCATCCATGGGAGGAGAGAACCTTAGTCCTGTTAAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR GCA 72 bp CAAGGGTCCTCTCTTCCCAACGAGTACATACACTTCTaGATTTGTCAGAAACTGAAAGAGCTTCTTTGGAGA +
Preference number: 3 (lower is better)
Translates to: QGSSLPNEYIHF*ICQKLKELLWR
Trigger: TCTCCAAAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAGAGAGGACCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR GCA 72 bp TGCATTTATTACCAGTTGGAACATCTTCTGGGTATATaGCCAGGACAGGTATTGCTGGATCTTCCGGTAGTA +
Preference number: 3 (lower is better)
Translates to: CIYYQLEHLLGI*PGQVLLDLPVV
Trigger: TACTACCGGAAGATCCAGCAATACCTGTCCTGGGCATATACCCAGAAGATGTTCCAACTGGTAATAAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp TGGAGACTATATAAGGCTCCTGTCAGAAAGCACTTTTaGGCATCCAAAATAGCGTCTGGGTTTGGTGATTGT +
Preference number: 3 (lower is better)
Translates to: WRLYKAPVRKHF*ASKIASGFGDC
Trigger: ACAATCACCAAACCCAGACGCTATTTTGGATGCCCAAAAGTGCTTTCTGACAGGAGCCTTATATAGTCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp AGTTTTGGGACTGGGTTGGTGATACAGTTCCACTACTaGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAAT +
Preference number: 3 (lower is better)
Translates to: SFGTGLVIQFHY*KTCLVTKEGEN
Trigger: ATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAACTGTATCACCAACCCAGTCCCAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp AACCTTGAAGCAAGGCAGATTGTAGATGGAAAGTTTTaGGACTGGGTTGGTGATACAGTTCCACTACTGGAA +
Preference number: 3 (lower is better)
Translates to: NLEARQIVDGKF*DWVGDTVPLLE
Trigger: TTCCAGTAGTGGAACTGTATCACCAACCCAGTCCCAAAACTTTCCATCTACAATCTGCCTTGCTTCAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp TGTGAGCATAGTGGAGCATGTGCATTTATTACCAGTTaGAACATCTTCTGGGTATATGCCCAGGACAGGTAT +
Preference number: 3 (lower is better)
Translates to: CEHSGACAFITS*NIFWVYAQDRY
Trigger: ATACCTGTCCTGGGCATATACCCAGAAGATGTTCCAACTGGTAATAAATGCACATGCTCCACTATGCTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGAATTGTGAATATTCTTaGGCTGGTGTAAGAGGAGAG +
Preference number: 3 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLNCEYS*AGVRGE
Trigger: CTCTCCTCTTACACCAGCCAAAGAATATTCACAATT...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGGCTAATACATCTGCATaGTTATACTCACACAGAGGA +
Preference number: 3 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQANTSA*LYSHRG
Trigger: TCCTCTGTGTGAGTATAACAATGCAGATGTATTAGC...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGCCATTGCTAGTGGGATaGCAAGCTGGTAAAAACACT +
Preference number: 3 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWPLLVG*QAGKNT
Trigger: AGTGTTTTTACCAGCTTGCAATCCCACTAGCAATGG...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGGTATCCAGTCCTCAGTaGAGGTACATCTGGGTTTTT +
Preference number: 3 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWVSSPQ*RYIWVF
Trigger: AAAAACCCAGATGTACCTCAACTGAGGACTGGATAC...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTCATATGGTTGTCCCTTCTATGGGACTGCAAATCCTTCTGCTCCTTAGGTCCTTTTGTGAATTGTATCTaGGGTATTCCAAGCTACTGG +
Preference number: 3 (lower is better)
Translates to: FIWLSLLWDCKSFCSLGPFVNCI*GIPSYW
Trigger: CCAGTAGCTTGGAATACCCAAGATACAATTCACAAA...AGGACCTAAGGAGCAGAAGGATTTGCAGTCCCATAGAAGGGACAACCATATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGTTTGTGAATTGTATCTaGGGTATTCCAAGCTACTGG +
Preference number: 3 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQFVNCI*GIPSYW
Trigger: CCAGTAGCTTGGAATACCCAAGATACAATTCACAAA...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGTTTGTGAATTGTATCTaGGGTATTCCAAGCTACTGG +
Preference number: 3 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLFVNCI*GIPSYW
Trigger: CCAGTAGCTTGGAATACCCAAGATACAATTCACAAA...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGTTGTCTTCCTTCATCTaGAGTTTCATGTGGTTTGTG +
Preference number: 3 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLLSSFI*SFMWFV
Trigger: CACAAACCACATGAAACTCAAGATGAAGGAAGACAA...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGTGGTCTTCCTTCATCTaGAGTTTCATATGGTGTATG +
Preference number: 3 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLWSSFI*SFIWCM
Trigger: CATACACCATATGAAACTCAAGATGAAGGAAGACCA...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGCAAAGAATCCACATTTaGGTCTTCCTTCATCTTGAG +
Preference number: 3 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQQRIHI*VFLHLE
Trigger: CTCAAGATGAAGGAAGACCAAAATGTGGATTCTTTG...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGAAATTAGACCAGTCATaGGATGTGATAGCTGTAAGC +
Preference number: 3 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLKLDQS*DVIAVS
Trigger: GCTTACAGCTATCACATCCAATGACTGGTCTAATTT...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGAAATTAGACCAGTCATaGGATGTGATAGCTGTAAGC +
Preference number: 3 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQKLDQS*DVIAVS
Trigger: GCTTACAGCTATCACATCCAATGACTGGTCTAATTT...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR TCA 72 bp TTAACAGGACTAAGGTTCTCTCCTCCCATGGATGACTaGTTACACCATCTTCTGCTTTATATGCAGCTGGAA +
Preference number: 3 (lower is better)
Translates to: LTGLRFSPPMDD*LHHLLLYMQLE
Trigger: TTCCAGCTGCATATAAAGCAGAAGATGGTGTAATCAGTCATCCATGGGAGGAGAGAACCTTAGTCCTGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR GCA 72 bp ACTACCAAACTGGTTTCCAGAGTGGTTGTACCAGCTTaGAATCCCACCTACAGAGCAATTGTGATAAAAACT +
Preference number: 3 (lower is better)
Translates to: TTKLVSRVVVPA*NPTYRAIVIKT
Trigger: AGTTTTTATCACAATTGCTCTGTAGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAACCAGTTTGGTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp ATGACTGATTACACCATCTTCTGCTTTATATGCAGCTaGAACCATGAGTCCTACCGTGTGTACTCTATGGTT +
Preference number: 3 (lower is better)
Translates to: MTDYTIFCFICS*NHESYRVYSMV
Trigger: AACCATAGAGTACACACGGTAGGACTCATGGTTCCAGCTGCATATAAAGCAGAAGATGGTGTAATCAGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTAATTGTGAATATTCTTaGGCTGGTGTAAGAGGAGAG +
Preference number: 3 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSNCEYS*AGVRGE
Trigger: CTCTCCTCTTACACCAGCCAAAGAATATTCACAATT...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGAATTGTGAATATTCTTaGGCTGGTGTAAGAGGAGAG +
Preference number: 3 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQNCEYS*AGVRGE
Trigger: CTCTCCTCTTACACCAGCCAAAGAATATTCACAATT...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGATAACAAACATGGTTTaGTTTAGACAGCTCAGAAGG +
Preference number: 3 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQITNMV*FRQLRR
Trigger: CCTTCTGAGCTGTCTAAACAAAACCATGTTTGTTAT...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGATAACAAACATGGTTTaGTTTAGACAGCTCAGAAGG +
Preference number: 3 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLITNMV*FRQLRR
Trigger: CCTTCTGAGCTGTCTAAACAAAACCATGTTTGTTAT...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTGCTAATACATCTGCATaGTTATACTCACACAGAGGA +
Preference number: 3 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSANTSA*LYSHRG
Trigger: TCCTCTGTGTGAGTATAACAATGCAGATGTATTAGC...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCGCTAATACATCTGCATaGTTATACTCACACAGAGGA +
Preference number: 3 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIANTSA*LYSHRG
Trigger: TCCTCTGTGTGAGTATAACAATGCAGATGTATTAGC...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGGGAAAATGTGGTGCATaGGAAAATTCATGGCATTTA +
Preference number: 3 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQGKCGA*ENSWHL
Trigger: TAAATGCCATGAATTTTCCAATGCACCACATTTTCC...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTCATATGGTTGTCCCTTCTATGGGACTGCAAATCCTTCTGCTCCTTAGGTCCTGGAAAATGTGGTGCATaGGAAAATTCATGGCATTTA +
Preference number: 3 (lower is better)
Translates to: FIWLSLLWDCKSFCSLGPGKCGA*ENSWHL
Trigger: TAAATGCCATGAATTTTCCAATGCACCACATTTTCC...AGGACCTAAGGAGCAGAAGGATTTGCAGTCCCATAGAAGGGACAACCATATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTCATATGGTTGTCCCTTCTATGGGACTGCAAATCCTTCTGCTCCTTAGGTCCTGCTGGTAAAAACACTTaGGAAATCAGATTGGTAGTT +
Preference number: 3 (lower is better)
Translates to: FIWLSLLWDCKSFCSLGPAGKNT*EIRLVV
Trigger: AACTACCAATCTGATTTCCAAAGTGTTTTTACCAGC...AGGACCTAAGGAGCAGAAGGATTTGCAGTCCCATAGAAGGGACAACCATATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACTGGTTTCCAGAGTGGTaGTACCAGCTTGCAATCCCA +
Preference number: 3 (lower is better)
Translates to: FILSFMWFVNCILGIPSYWFPEW*YQLAIP
Trigger: TGGGATTGCAAGCTGGTACAACCACTCTGGAAACCA...GTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTCATATGGTTGTCCCTTCTATGGGACTGCAAATCCTTCTGCTCCTTAGGTCCTGTGAGTAGTACTCCATaGTGTAAATGTACCACATTT +
Preference number: 3 (lower is better)
Translates to: FIWLSLLWDCKSFCSLGPVSSTP*CKCTTF
Trigger: AAATGTGGTACATTTACACAATGGAGTACTACTCAC...AGGACCTAAGGAGCAGAAGGATTTGCAGTCCCATAGAAGGGACAACCATATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGGTGAGTAGTACTCCATaGTGTAAATGTACCACATTT +
Preference number: 3 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLVSSTP*CKCTTF
Trigger: AAATGTGGTACATTTACACAATGGAGTACTACTCAC...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCTTTGTGAATTGTATCTaGGGTATTCCAAGCTACTGG +
Preference number: 3 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIFVNCI*GIPSYW
Trigger: CCAGTAGCTTGGAATACCCAAGATACAATTCACAAA...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTTTTGTGAATTGTATCTaGGGTATTCCAAGCTACTGG +
Preference number: 3 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSFVNCI*GIPSYW
Trigger: CCAGTAGCTTGGAATACCCAAGATACAATTCACAAA...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGTTGTCTTCCTTCATCTaGAGTTTCATGTGGTTTGTG +
Preference number: 3 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQLSSFI*SFMWFV
Trigger: CACAAACCACATGAAACTCAAGATGAAGGAAGACAA...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTTTGTCTTCCTTCATCTaGAGTTTCATGTGGTTTGTG +
Preference number: 3 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSLSSFI*SFMWFV
Trigger: CACAAACCACATGAAACTCAAGATGAAGGAAGACAA...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCCATACACTTCTGCATTaGTCAGAAACTGAAAGAGCT +
Preference number: 3 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIHTLLH*SETERA
Trigger: AGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATG...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCTGGTCTTCCTTCATCTaGAGTTTCATATGGTGTATG +
Preference number: 3 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIWSSFI*SFIWCM
Trigger: CATACACCATATGAAACTCAAGATGAAGGAAGACCA...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCCAAAGAATCCACATTTaGGTCTTCCTTCATCTTGAG +
Preference number: 3 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIQRIHI*VFLHLE
Trigger: CTCAAGATGAAGGAAGACCAAAATGTGGATTCTTTG...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR TCA 72 bp AATCCCACCTACAGAGCAATTGTGATAAAAACTGCATaGCATTGTTACACTGACAGGCAGGTAGATCAATGG +
Preference number: 3 (lower is better)
Translates to: NPTYRAIVIKTA*HCYTDRQVDQW
Trigger: CCATTGATCTACCTGCCTGTCAGTGTAACAATGTCATGCAGTTTTTATCACAATTGCTCTGTAGGTGGGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGAATTGTGAATATTCTTaGGCTGGTGTAAGAGGAGAG +
Preference number: 3 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWNCEYS*AGVRGE
Trigger: CTCTCCTCTTACACCAGCCAAAGAATATTCACAATT...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTATAACAAACATGGTTTaGTTTAGACAGCTCAGAAGG +
Preference number: 3 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSITNMV*FRQLRR
Trigger: CCTTCTGAGCTGTCTAAACAAAACCATGTTTGTTAT...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGGCTGGTAAAAACACTTaGGAAATCAGATTGGTAGTT +
Preference number: 3 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQAGKNT*EIRLVV
Trigger: AACTACCAATCTGATTTCCAAAGTGTTTTTACCAGC...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCGCTGGTAAAAACACTTaGGAAATCAGATTGGTAGTT +
Preference number: 3 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIAGKNT*EIRLVV
Trigger: AACTACCAATCTGATTTCCAAAGTGTTTTTACCAGC...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCGTGAGTAGTACTCCATaGTGTAAATGTACCACATTT +
Preference number: 3 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIVSSTP*CKCTTF
Trigger: AAATGTGGTACATTTACACAATGGAGTACTACTCAC...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGTTTGTGAATTGTATCTaGGGTATTCCAAGCTACTGG +
Preference number: 3 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWFVNCI*GIPSYW
Trigger: CCAGTAGCTTGGAATACCCAAGATACAATTCACAAA...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGTCAAAGTATCCAGTTTaGTCTTCCTTCATCTTGAGT +
Preference number: 3 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQSKYPV*SSFILS
Trigger: ACTCAAGATGAAGGAAGACAAAACTGGATACTTTGA...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCTCAAAGTATCCAGTTTaGTCTTCCTTCATCTTGAGT +
Preference number: 3 (lower is better)
Translates to: VPLLEDLPGYKRRRESFISKYPV*SSFILS
Trigger: ACTCAAGATGAAGGAAGACAAAACTGGATACTTTGA...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGCATACACTTCTGCATTaGTCAGAAACTGAAAGAGCT +
Preference number: 3 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWHTLLH*SETERA
Trigger: AGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATG...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCCATATGGTGTATGAATaGCATCTTGGGTATTGCAAT +
Preference number: 3 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIHMVYE*HLGYCN
Trigger: ATTGCAATACCCAAGATGCAATTCATACACCATATG...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTCCATTGCTAGTGGGATaGCAAGCTGGTAAAAACACT +
Preference number: 3 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPPLLVG*QAGKNT
Trigger: AGTGTTTTTACCAGCTTGCAATCCCACTAGCAATGG...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACCCATTGCTAGTGGGATaGCAAGCTGGTAAAAACACT +
Preference number: 3 (lower is better)
Translates to: FILSFMWFVNCILGIPSYPLLVG*QAGKNT
Trigger: AGTGTTTTTACCAGCTTGCAATCCCACTAGCAATGG...GTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACGTATCCAGTCCTCAGTaGAGGTACATCTGGGTTTTT +
Preference number: 3 (lower is better)
Translates to: FILSFMWFVNCILGIPSYVSSPQ*RYIWVF
Trigger: AAAAACCCAGATGTACCTCAACTGAGGACTGGATAC...GTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp CTTCCCAACGAGTACATACACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTTTTGTGAATTGTATCTaGGGTATTCCAAGCTACTGG +
Preference number: 3 (lower is better)
Translates to: LPNEYIHFCICQKLKELLFVNCI*GIPSYW
Trigger: CCAGTAGCTTGGAATACCCAAGATACAATTCACAAA...AAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR TCA 72 bp ACAAACATGGTTTTGTTTAGACAGCTCAGAAGGTACTaGCCAGAGTTTATTAGGAGAGTAGAACCCATTCAG +
Preference number: 3 (lower is better)
Translates to: TNMVLFRQLRRY*PEFIRRVEPIQ
Trigger: CTGAATGGGTTCTACTCTCCTAATAAACTCTGGTCAGTACCTTCTGAGCTGTCTAAACAAAACCATGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR TCA 72 bp GTAAATGTACCACATTTTCTGTACACATTCCTCTGTTaGGTGACATCTGGGTTCTATCCACTTTCTGGCTAT +
Preference number: 3 (lower is better)
Translates to: VNVPHFLYTFLC*VTSGFYPLSGY
Trigger: ATAGCCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAATGTGGTACATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR GCA 72 bp AGGGGAAATTTTCCTAAAGAGAACACCAATAGCCTATaGTCTAAGATCAAGAATTGGCAAATGGGACCTCAT +
Preference number: 3 (lower is better)
Translates to: RGNFPKENTNSL*SKIKNWQMGPH
Trigger: ATGAGGTCCCATTTGCCAATTCTTGATCTTAGAGCATAGGCTATTGGTGTTCTCTTTAGGAAAATTTCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp ATCAGTGAGTGCATATCATGTGTGCTCTTTTGTGAATaGGTTACATCACTCAGGATGTTATCATACAGATCC +
Preference number: 3 (lower is better)
Translates to: ISECISCVLFCE*VTSLRMLSYRS
Trigger: GGATCTGTATGATAACATCCTGAGTGATGTAACCCATTCACAAAAGAGCACACATGATATGCACTCACTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp CACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTTaGAGACTATATAAGGCTCCTGTCAGAAAGCACTTT +
Preference number: 3 (lower is better)
Translates to: HFCICQKLKELL*RLYKAPVRKHF
Trigger: AAAGTGCTTTCTGACAGGAGCCTTATATAGTCTCCAAAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp CTAGATCCTTCACTGGGAATCATGTGTTTTGTCCAATaGATAGAAGTGAGTATCCAGTTCTGTATTTGTCAG +
Preference number: 3 (lower is better)
Translates to: LDPSLGIMCFVQ*IEVSIQFCICQ
Trigger: CTGACAAATACAGAACTGGATACTCACTTCTATCCATTGGACAAAACACATGATTCCCAGTGAAGGATCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTGATCCATTTTTATCTCCGTGTACAAAGCTCAAGTCCAAGTGAATCAAGGATCAATTGTGAATATTCTTaGGCTGGTGTAAGAGGAGAG +
Preference number: 3 (lower is better)
Translates to: LIHFYLRVQSSSPSESRINCEYS*AGVRGE
Trigger: CTCTCCTCTTACACCAGCCAAAGAATATTCACAATT...GATCCTTGATTCACTTGGACTTGAGCTTTGTACACGGAGATAAAAATGGATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TGGTGCATTGGAAAATTCATGGCATTTATGAGGGATATTAGGGATATTGTCTCCGCTAATACATCTGCATaGTTATACTCACACAGAGGA +
Preference number: 3 (lower is better)
Translates to: WCIGKFMAFMRDIRDIVSANTSA*LYSHRG
Trigger: TCCTCTGTGTGAGTATAACAATGCAGATGTATTAGC...GGAGACAATATCCCTAATATCCCTCATAAATGCCATGAATTTTCCAATGCACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTGATCCATTTTTATCTCCGTGTACAAAGCTCAAGTCCAAGTGAATCAAGGATCGCTAATACATCTGCATaGTTATACTCACACAGAGGA +
Preference number: 3 (lower is better)
Translates to: LIHFYLRVQSSSPSESRIANTSA*LYSHRG
Trigger: TCCTCTGTGTGAGTATAACAATGCAGATGTATTAGC...GATCCTTGATTCACTTGGACTTGAGCTTTGTACACGGAGATAAAAATGGATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATGTATCCAGTCCTCAGTaGAGGTACATCTGGGTTTTT +
Preference number: 3 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYVSSPQ*RYIWVF
Trigger: AAAAACCCAGATGTACCTCAACTGAGGACTGGATAC...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp CTTCCCAACGAGTACATACACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTGTGAGTAGTACTCCATaGTGTAAATGTACCACATTT +
Preference number: 3 (lower is better)
Translates to: LPNEYIHFCICQKLKELLVSSTP*CKCTTF
Trigger: AAATGTGGTACATTTACACAATGGAGTACTACTCAC...AAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp CTTCCCAACGAGTACATACACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTTCAAAGTATCCAGTTTaGTCTTCCTTCATCTTGAGT +
Preference number: 3 (lower is better)
Translates to: LPNEYIHFCICQKLKELLSKYPV*SSFILS
Trigger: ACTCAAGATGAAGGAAGACAAAACTGGATACTTTGA...AAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR TCA 72 bp GTGTGTTCTTTTGTGATTGGGTTACCTCACTTAGGATaGTATCCTGTAGATCCATCCATTTGCCTAAGAATT +
Preference number: 3 (lower is better)
Translates to: VCSFVIGLPHLG*YPVDPSICLRI
Trigger: AATTCTTAGGCAAATGGATGGATCTACAGGATATCATCCTAAGTGAGGTAACCCAATCACAAAAGAACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR TCA 72 bp ATGTACCACATTTTCTGTACACATTCCTCTGTTGAGTaGCATCTGGGTTCTATCCACTTTCTGGCTATTATA +
Preference number: 3 (lower is better)
Translates to: MYHIFCTHSSVE*HLGSIHFLAII
Trigger: TATAATAGCCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAATGTGGTACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp GAGAACACCAATAGCCTATGCTCTAAGATCAAGAATTaGCAAATGGGACCTCATAAAATTACAAAGCTTCTC +
Preference number: 3 (lower is better)
Translates to: ENTNSLCSKIKN*QMGPHKITKLL
Trigger: GAGAAGCTTTGTAATTTTATGAGGTCCCATTTGCCAATTCTTGATCTTAGAGCATAGGCTATTGGTGTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp ATAAGTGAACACATACCATGCTTAACTTTCTGGGTCTaGGTTACCTCCTTCAGGTTGCTTTATTTTTGCTTA +
Preference number: 3 (lower is better)
Translates to: ISEHIPCLTFWV*VTSFRLLYFCL
Trigger: TAAGCAAAAATAAAGCAACCTGAAGGAGGTAACCCAGACCCAGAAAGTTAAGCATGGTATGTGTTCACTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TGGTGCATTGGAAAATTCATGGCATTTATGAGGGATATTAGGGATATTGTCTCCATAACAAACATGGTTTaGTTTAGACAGCTCAGAAGG +
Preference number: 3 (lower is better)
Translates to: WCIGKFMAFMRDIRDIVSITNMV*FRQLRR
Trigger: CCTTCTGAGCTGTCTAAACAAAACCATGTTTGTTAT...GGAGACAATATCCCTAATATCCCTCATAAATGCCATGAATTTTCCAATGCACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp CATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACTGATAACAAACATGGTTTaGTTTAGACAGCTCAGAAGG +
Preference number: 3 (lower is better)
Translates to: HLEFHVVCELYLGYSKLLITNMV*FRQLRR
Trigger: CCTTCTGAGCTGTCTAAACAAAACCATGTTTGTTAT...CAGTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTGCTAATACATCTGCATaGTTATACTCACACAGAGGA +
Preference number: 3 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPANTSA*LYSHRG
Trigger: TCCTCTGTGTGAGTATAACAATGCAGATGTATTAGC...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTGATCCATTTTTATCTCCGTGTACAAAGCTCAAGTCCAAGTGAATCAAGGATCGGAAAATGTGGTGCATaGGAAAATTCATGGCATTTA +
Preference number: 3 (lower is better)
Translates to: LIHFYLRVQSSSPSESRIGKCGA*ENSWHL
Trigger: TAAATGCCATGAATTTTCCAATGCACCACATTTTCC...GATCCTTGATTCACTTGGACTTGAGCTTTGTACACGGAGATAAAAATGGATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTGATCCATTTTTATCTCCGTGTACAAAGCTCAAGTCCAAGTGAATCAAGGATCGCTGGTAAAAACACTTaGGAAATCAGATTGGTAGTT +
Preference number: 3 (lower is better)
Translates to: LIHFYLRVQSSSPSESRIAGKNT*EIRLVV
Trigger: AACTACCAATCTGATTTCCAAAGTGTTTTTACCAGC...GATCCTTGATTCACTTGGACTTGAGCTTTGTACACGGAGATAAAAATGGATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTCATACACTTCTGCATTaGTCAGAAACTGAAAGAGCT +
Preference number: 3 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPHTLLH*SETERA
Trigger: AGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATG...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR GCA 72 bp GCTAATATTCTATTATCAGTGAGTGCATATCATGTGTaGTCTTTTGTGAATGGGTTACATCACTCAGGATGT +
Preference number: 3 (lower is better)
Translates to: ANILLSVSAYHV*SFVNGLHHSGC
Trigger: ACATCCTGAGTGATGTAACCCATTCACAAAAGAGCACACATGATATGCACTCACTGATAATAGAATATTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp TGGTGTATGAATTGCATCTTGGGTATTGCAATTTTCTaGGCTAATATCCTCTTATCAGTGAGTGCATTTCAT +
Preference number: 3 (lower is better)
Translates to: WCMNCILGIAIF*ANILLSVSAFH
Trigger: ATGAAATGCACTCACTGATAAGAGGATATTAGCCCAGAAAATTGCAATACCCAAGATGCAATTCATACACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp CTAATGATGACTTGGCTAGGCACCAATCTACGAATATaGCAGAATATCATTAGGAATGATTTCAATAAGGCT +
Preference number: 3 (lower is better)
Translates to: LMMTWLGTNLRI*QNIIRNDFNKA
Trigger: AGCCTTATTGAAATCATTCCTAATGATATTCTGCCATATTCGTAGATTGGTGCCTAGCCAAGTCATCATTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACATAACAAACATGGTTTaGTTTAGACAGCTCAGAAGG +
Preference number: 3 (lower is better)
Translates to: FILSFMWFVNCILGIPSYITNMV*FRQLRR
Trigger: CCTTCTGAGCTGTCTAAACAAAACCATGTTTGTTAT...GTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACGGAAAATGTGGTGCATaGGAAAATTCATGGCATTTA +
Preference number: 3 (lower is better)
Translates to: FILSFMWFVNCILGIPSYGKCGA*ENSWHL
Trigger: TAAATGCCATGAATTTTCCAATGCACCACATTTTCC...GTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTGCTGGTAAAAACACTTaGGAAATCAGATTGGTAGTT +
Preference number: 3 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPAGKNT*EIRLVV
Trigger: AACTACCAATCTGATTTCCAAAGTGTTTTTACCAGC...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACGCTGGTAAAAACACTTaGGAAATCAGATTGGTAGTT +
Preference number: 3 (lower is better)
Translates to: FILSFMWFVNCILGIPSYAGKNT*EIRLVV
Trigger: AACTACCAATCTGATTTCCAAAGTGTTTTTACCAGC...GTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTGTGAGTAGTACTCCATaGTGTAAATGTACCACATTT +
Preference number: 3 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPVSSTP*CKCTTF
Trigger: AAATGTGGTACATTTACACAATGGAGTACTACTCAC...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR-3UTR CAA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATGGAAAATGTGGTGCATaGGAAAATTCATGGCATTTA +
Preference number: 3 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYGKCGA*ENSWHL
Trigger: TAAATGCCATGAATTTTCCAATGCACCACATTTTCC...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR TCA 72 bp TTGGACTTAAACTCCCTCTTTACTCAGTGCTATTATTaGTTACATAGCAATTGTACTACCCCAGCTTACATA +
Preference number: 3 (lower is better)
Translates to: LDLNSLFTQCYY*LHSNCTTPAYI
Trigger: TATGTAAGCTGGGGTAGTACAATTGCTATGTAATCAATAATAGCACTGAGTAAAGAGGGAGTTTAAGTCCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR TCA 72 bp GGTGATTGGATAGAACTTTCACAAGAGTTGTACAGCTaGGTTTTAGTACATCTTTTCACATTTCTCTTTGGA +
Preference number: 3 (lower is better)
Translates to: GDWIELSQELYS*VLVHLFTFLFG
Trigger: TCCAAAGAGAAATGTGAAAAGATGTACTAAAACTCAGCTGTACAACTCTTGTGAAAGTTCTATCCAATCACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR TCA 72 bp TGTTTCTTAGCCTGTTTGGGTTTCTGCACTGTAGCATaGTTATCTGTTACTAAACAGCTAATAACCACTTAT +
Preference number: 3 (lower is better)
Translates to: CFLACLGFCTVA*LSVTKQLITTY
Trigger: ATAAGTGGTTATTAGCTGTTTAGTAACAGATAATCATGCTACAGTGCAGAAACCCAAACAGGCTAAGAAACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR GCA 72 bp TCTTCCTTCATCTTGAGTTTCATATGGTGTATGAATTaGATCTTGGGTATTGCAATTTTCTGGGCTAATATC +
Preference number: 3 (lower is better)
Translates to: SSFILSFIWCMN*ILGIAIFWANI
Trigger: GATATTAGCCCAGAAAATTGCAATACCCAAGATGCAATTCATACACCATATGAAACTCAAGATGAAGGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp TGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACTaGGCTAATATTCTATTATCAGTGAGTGCATATCAT +
Preference number: 3 (lower is better)
Translates to: WFVNCILGIPSY*ANILLSVSAYH
Trigger: ATGATATGCACTCACTGATAATAGAATATTAGCCCAGTAGCTTGGAATACCCAAGATACAATTCACAAACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CCA 72 bp TCCACATTTTGGTCTTCCTTCATCTTGAGTTTCATATaGTGTATGAATTGCATCTTGGGTATTGCAATTTTC +
Preference number: 3 (lower is better)
Translates to: STFWSSFILSFI*CMNCILGIAIF
Trigger: GAAAATTGCAATACCCAAGATGCAATTCATACACCATATGAAACTCAAGATGAAGGAAGACCAAAATGTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp CCTACCTACCCACTCACACTTCTTGGCCCTGGCACTCCCCTTACTGGGACATATTGCTATGGGCTGCTCTaGTCTCAGCATAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PTYPLTLLGPGTPLTGTYCYGLL*SQHSPW
Trigger: CCAGGGGCTATGCTGAGATCAGAGCAGCCCATAGCA...ATATGTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGTAGGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp CCTACCTACCCACTCACACTTCTTGGCCCTGGCACTCCCCTTACTGGGACATATTCTCAGCATAGCCCCTaGTGCCTTGATGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PTYPLTLLGPGTPLTGTYSQHSP*CLDGEG
Trigger: TCCCTCCCCATCAAGGCACCAGGGGCTATGCTGAGA...ATATGTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGTAGGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp CCATGCCCTGCTCCCCTACCTACCCACTCACACTTCTaGGCCCTGGCACTCCCCTTACTGGGACATATAAAG +
Preference number: 4 (lower is better)
Translates to: PCPAPLPTHSHF*ALALPLLGHIK
Trigger: CTTTATATGTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGTAGGTAGGGGAGCAGGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TATTCTTTGGCTGGTGTAAGAGGAGAGGTCAGGGTCAAGGGCTCTGTGTCACAGTCTCAGCATAGCCCCTaGTGCCTTGATGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: YSLAGVRGEVRVKGSVSQSQHSP*CLDGEG
Trigger: TCCCTCCCCATCAAGGCACCAGGGGCTATGCTGAGA...CTGTGACACAGAGCCCTTGACCCTGACCTCTCCTCTTACACCAGCCAAAGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TCAGGGTCAAGGGCTCTGTGTCACAGGTTGGACTTAAACTCCCTCTTTACTCAGTCTCAGCATAGCCCCTaGTGCCTTGATGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SGSRALCHRLDLNSLFTQSQHSP*CLDGEG
Trigger: TCCCTCCCCATCAAGGCACCAGGGGCTATGCTGAGA...CTGAGTAAAGAGGGAGTTTAAGTCCAACCTGTGACACAGAGCCCTTGACCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR GCA 90 bp TCAGGGTCAAGGGCTCTGTGTCACAGGTTGGACTTAAACTCCCTCTTTACTCAGCAGCATAGCCCCTGGTaGCTTGATGGGGAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: SGSRALCHRLDLNSLFTQQHSPW*LDGEGK
Trigger: TTTTCCCTCCCCATCAAGGCACCAGGGGCTATGCTG...CTGAGTAAAGAGGGAGTTTAAGTCCAACCTGTGACACAGAGCCCTTGACCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR GCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGCAGCATAGCCCCTGGTaGCTTGATGGGGAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLQHSPW*LDGEGK
Trigger: TTTTCCCTCCCCATCAAGGCACCAGGGGCTATGCTG...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp CCTACCTACCCACTCACACTTCTTGGCCCTGGCACTCCCCTTACTGGGACATATAGCATAGCAATGCTATaGGCTGCTCTGATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PTYPLTLLGPGTPLTGTYSIAML*AALISA
Trigger: TGCTGAGATCAGAGCAGCCCATAGCATTGCTATGCT...ATATGTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGTAGGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGTGCTATGGGCTGCTCTaGTCTCAGCATAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLCYGLL*SQHSPW
Trigger: CCAGGGGCTATGCTGAGATCAGAGCAGCCCATAGCA...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp TTCATATGGTTGTCCCTTCTATGGGACTGCAAATCCTTCTGCTCCTTAGGTCCTTGCTATGGGCTGCTCTaGTCTCAGCATAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: FIWLSLLWDCKSFCSLGPCYGLL*SQHSPW
Trigger: CCAGGGGCTATGCTGAGATCAGAGCAGCCCATAGCA...AGGACCTAAGGAGCAGAAGGATTTGCAGTCCCATAGAAGGGACAACCATATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp CCTACCTACCCACTCACACTTCTTGGCCCTGGCACTCCCCTTACTGGGACATATGTGCCACTTCCTCAGTaGTTTTCATGGCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: PTYPLTLLGPGTPLTGTYVPLPQ*FSWLHS
Trigger: AGAATGAAGCCATGAAAACCACTGAGGAAGTGGCAC...ATATGTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGTAGGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGTCTCAGCATAGCCCCTaGTGCCTTGATGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLSQHSP*CLDGEG
Trigger: TCCCTCCCCATCAAGGCACCAGGGGCTATGCTGAGA...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTTGCTATGGGCTGCTCTaGTCTCAGCATAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSCYGLL*SQHSPW
Trigger: CCAGGGGCTATGCTGAGATCAGAGCAGCCCATAGCA...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR GCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGCAGCATAGCCCCTGGTaGCTTGATGGGGAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLQHSPW*LDGEGK
Trigger: TTTTCCCTCCCCATCAAGGCACCAGGGGCTATGCTG...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR GCA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGCAGCATAGCCCCTGGTaGCTTGATGGGGAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQQHSPW*LDGEGK
Trigger: TTTTCCCTCCCCATCAAGGCACCAGGGGCTATGCTG...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTTCTCAGCATAGCCCCTaGTGCCTTGATGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSSQHSP*CLDGEG
Trigger: TCCCTCCCCATCAAGGCACCAGGGGCTATGCTGAGA...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp GTTCCTCATATGGGGCTCCAAACCCCTTCAGCTCCTTaGGTCCTTTCTCTAGATCCTTCACTGGGAATCATG +
Preference number: 4 (lower is better)
Translates to: VPHMGLQTPSAP*VLSLDPSLGIM
Trigger: CATGATTCCCAGTGAAGGATCTAGAGAAAGGACCAAAGGAGCTGAAGGGGTTTGGAGCCCCATATGAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp GGCCCTGGGAACTCTAGGAGTACTGGTTGGTTTATATaGTTGTTCCTCATATGGGGCTCCAAACCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GPGNSRSTGWFI*LFLIWGSKPLQ
Trigger: CTGAAGGGGTTTGGAGCCCCATATGAGGAACAACAATATAAACCAACCAGTACTCCTAGAGTTCCCAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR GCA 90 bp TATTCTTTGGCTGGTGTAAGAGGAGAGGTCAGGGTCAAGGGCTCTGTGTCACAGCAACACGATCTGAAGTaGCACTTCCTCAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: YSLAGVRGEVRVKGSVSQQHDLK*HFLSGF
Trigger: AAAACCACTGAGGAAGTGGCACTTCAGATCGTGTTG...CTGTGACACAGAGCCCTTGACCCTGACCTCTCCTCTTACACCAGCCAAAGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TCAGGGTCAAGGGCTCTGTGTCACAGGTTGGACTTAAACTCCCTCTTTACTCAGAGCATAGCAATGCTATaGGCTGCTCTGATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SGSRALCHRLDLNSLFTQSIAML*AALISA
Trigger: TGCTGAGATCAGAGCAGCCCATAGCATTGCTATGCT...CTGAGTAAAGAGGGAGTTTAAGTCCAACCTGTGACACAGAGCCCTTGACCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp GAGGAGAGGTCAGGGTCAAGGGCTCTGTGTCACAGGTaGGACTTAAACTCCCTCTTTACTCAGTGCTATTAT +
Preference number: 4 (lower is better)
Translates to: EERSGSRALCHR*DLNSLFTQCYY
Trigger: ATAATAGCACTGAGTAAAGAGGGAGTTTAAGTCCAACCTGTGACACAGAGCCCTTGACCCTGACCTCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp CCTGGGAACTCTAGGAGTACTGGTTGGTTTATATTGTaGTTCCTCATATGGGGCTCCAAACCCCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: PGNSRSTGWFIL*FLIWGSKPLQL
Trigger: GAGCTGAAGGGGTTTGGAGCCCCATATGAGGAACAACAATATAAACCAACCAGTACTCCTAGAGTTCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp TCATTGGATGTGATAGCTGTAAGCTGTGAGCCACCATaGCCCCCAGCAAACCTTGAAGCAAGGCAGATTGTA +
Preference number: 4 (lower is better)
Translates to: SLDVIAVSCEPP*PPANLEARQIV
Trigger: TACAATCTGCCTTGCTTCAAGGTTTGCTGGGGGCAATGGTGGCTCACAGCTTACAGCTATCACATCCAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGAACAGGAATAGCTTATaGCCTTGGACCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLNRNSL*PWTFFL
Trigger: GAGGAAGAAGGTCCAAGGTCATAAGCTATTCCTGTT...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR GCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGCAGCATAGCCCCTGGTaGCTTGATGGGGAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWQHSPW*LDGEGK
Trigger: TTTTCCCTCCCCATCAAGGCACCAGGGGCTATGCTG...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TCAGGGTCAAGGGCTCTGTGTCACAGGTTGGACTTAAACTCCCTCTTTACTCAGGTGCCACTTCCTCAGTaGTTTTCATGGCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: SGSRALCHRLDLNSLFTQVPLPQ*FSWLHS
Trigger: AGAATGAAGCCATGAAAACCACTGAGGAAGTGGCAC...CTGAGTAAAGAGGGAGTTTAAGTCCAACCTGTGACACAGAGCCCTTGACCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp TATTCTTTGGCTGGTGTAAGAGGAGAGGTCAGGGTCAAGGGCTCTGTGTCACAGTTGGGAACACAGTCATaGATAGAATTAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: YSLAGVRGEVRVKGSVSQLGTQS*IELRCW
Trigger: CCAGCATCTTAATTCTATTCATGACTGTGTTCCCAA...CTGTGACACAGAGCCCTTGACCCTGACCTCTCCTCTTACACCAGCCAAAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp TGGTGCATTGGAAAATTCATGGCATTTATGAGGGATATTAGGGATATTGTCTCCTGCTATGGGCTGCTCTaGTCTCAGCATAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: WCIGKFMAFMRDIRDIVSCYGLL*SQHSPW
Trigger: CCAGGGGCTATGCTGAGATCAGAGCAGCCCATAGCA...GGAGACAATATCCCTAATATCCCTCATAAATGCCATGAATTTTCCAATGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp CATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACTGTGCTATGGGCTGCTCTaGTCTCAGCATAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: HLEFHVVCELYLGYSKLLCYGLL*SQHSPW
Trigger: CCAGGGGCTATGCTGAGATCAGAGCAGCCCATAGCA...CAGTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR GCA 90 bp CTTCCCAACGAGTACATACACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTCAGCATAGCCCCTGGTaGCTTGATGGGGAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: LPNEYIHFCICQKLKELLQHSPW*LDGEGK
Trigger: TTTTCCCTCCCCATCAAGGCACCAGGGGCTATGCTG...AAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGCCTCAGTGGTTTTCATaGCTTCATTCTGAGAAGACA +
Preference number: 4 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLPQWFS*LHSEKT
Trigger: TGTCTTCTCAGAATGAAGCCATGAAAACCACTGAGG...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TCAGGGTCAAGGGCTCTGTGTCACAGGTTGGACTTAAACTCCCTCTTTACTCAGTGCTCAAGACACAGGTaGAACACAAGTTTATGCTTC +
Preference number: 4 (lower is better)
Translates to: SGSRALCHRLDLNSLFTQCSRHR*NTSLCF
Trigger: GAAGCATAAACTTGTGTTCCACCTGTGTCTTGAGCA...CTGAGTAAAGAGGGAGTTTAAGTCCAACCTGTGACACAGAGCCCTTGACCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGTGCTCAAGACACAGGTaGAACACAAGTTTATGCTTC +
Preference number: 4 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLCSRHR*NTSLCF
Trigger: GAAGCATAAACTTGTGTTCCACCTGTGTCTTGAGCA...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TATTCTTTGGCTGGTGTAAGAGGAGAGGTCAGGGTCAAGGGCTCTGTGTCACAGATTATGTGTGTTCTGTaGACCACTGACTTTCATTGG +
Preference number: 4 (lower is better)
Translates to: YSLAGVRGEVRVKGSVSQIMCVL*TTDFHW
Trigger: CCAATGAAAGTCAGTGGTCCACAGAACACACATAAT...CTGTGACACAGAGCCCTTGACCCTGACCTCTCCTCTTACACCAGCCAAAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp CCTACCTACCCACTCACACTTCTTGGCCCTGGCACTCCCCTTACTGGGACATATATAAATATGGCATCATaGGCAAACCACAAGAACATA +
Preference number: 4 (lower is better)
Translates to: PTYPLTLLGPGTPLTGTYINMAS*ANHKNI
Trigger: TATGTTCTTGTGGTTTGCCCATGATGCCATATTTAT...ATATGTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGTAGGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TTGATCCATTTTTATCTCCGTGTACAAAGCTCAAGTCCAAGTGAATCAAGGATCTCTCAGCATAGCCCCTaGTGCCTTGATGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LIHFYLRVQSSSPSESRISQHSP*CLDGEG
Trigger: TCCCTCCCCATCAAGGCACCAGGGGCTATGCTGAGA...GATCCTTGATTCACTTGGACTTGAGCTTTGTACACGGAGATAAAAATGGATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TTCATATGGTTGTCCCTTCTATGGGACTGCAAATCCTTCTGCTCCTTAGGTCCTAGCATAGCAATGCTATaGGCTGCTCTGATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: FIWLSLLWDCKSFCSLGPSIAML*AALISA
Trigger: TGCTGAGATCAGAGCAGCCCATAGCATTGCTATGCT...AGGACCTAAGGAGCAGAAGGATTTGCAGTCCCATAGAAGGGACAACCATATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp CTGTCGAGGGTGTGGAGAAAGAGAAACACTCCTCCATaGCTAGTGGGATTGCAAGCTGGTAAAAACACTTTG +
Preference number: 4 (lower is better)
Translates to: LSRVWRKRNTPP*LVGLQAGKNTL
Trigger: CAAAGTGTTTTTACCAGCTTGCAATCCCACTAGCAATGGAGGAGTGTTTCTCTTTCTCCACACCCTCGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp TTTTCTGGGGAACTACCAAACTGGTTTCCAGAGTGGTaGTACCAGCTTGCAATCCCACCTACAGAGCAATTG +
Preference number: 4 (lower is better)
Translates to: FSGELPNWFPEW*YQLAIPPTEQL
Trigger: CAATTGCTCTGTAGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAACCAGTTTGGTAGTTCCCCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp TTCATATGGTTGTCCCTTCTATGGGACTGCAAATCCTTCTGCTCCTTAGGTCCTAACAGGAATAGCTTATaGCCTTGGACCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: FIWLSLLWDCKSFCSLGPNRNSL*PWTFFL
Trigger: GAGGAAGAAGGTCCAAGGTCATAAGCTATTCCTGTT...AGGACCTAAGGAGCAGAAGGATTTGCAGTCCCATAGAAGGGACAACCATATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR GCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGCAACACGATCTGAAGTaGCACTTCCTCAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLQHDLK*HFLSGF
Trigger: AAAACCACTGAGGAAGTGGCACTTCAGATCGTGTTG...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR GCA 90 bp CATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACTGCAGCATAGCCCCTGGTaGCTTGATGGGGAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: HLEFHVVCELYLGYSKLLQHSPW*LDGEGK
Trigger: TTTTCCCTCCCCATCAAGGCACCAGGGGCTATGCTG...CAGTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TCAGGGTCAAGGGCTCTGTGTCACAGGTTGGACTTAAACTCCCTCTTTACTCAGATTATGTGTGTTCTGTaGACCACTGACTTTCATTGG +
Preference number: 4 (lower is better)
Translates to: SGSRALCHRLDLNSLFTQIMCVL*TTDFHW
Trigger: CCAATGAAAGTCAGTGGTCCACAGAACACACATAAT...CTGAGTAAAGAGGGAGTTTAAGTCCAACCTGTGACACAGAGCCCTTGACCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGAGCATAGCAATGCTATaGGCTGCTCTGATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQSIAML*AALISA
Trigger: TGCTGAGATCAGAGCAGCCCATAGCATTGCTATGCT...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp TGTCCAATGGATAGAAGTGAGTATCCAGTTCTGTATTaGTCAGGTACTGGCAGAGCCTCTCATGAGACAGCT +
Preference number: 4 (lower is better)
Translates to: CPMDRSEYPVLY*SGTGRASHETA
Trigger: AGCTGTCTCATGAGAGGCTCTGCCAGTACCTGACAAATACAGAACTGGATACTCACTTCTATCCATTGGACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp GACTGGGTTGGTGATACAGTTCCACTACTGGAAGACTaGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATC +
Preference number: 4 (lower is better)
Translates to: DWVGDTVPLLED*PGYKRRRESFI
Trigger: GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAACTGTATCACCAACCCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTGCTATGGGCTGCTCTaGTCTCAGCATAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYCYGLL*SQHSPW
Trigger: CCAGGGGCTATGCTGAGATCAGAGCAGCCCATAGCA...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp TCAGGGTCAAGGGCTCTGTGTCACAGGTTGGACTTAAACTCCCTCTTTACTCAGCTGGCTTTCTATAGTTaGATATCAGAGAACAAGGAT +
Preference number: 4 (lower is better)
Translates to: SGSRALCHRLDLNSLFTQLAFYS*ISENKD
Trigger: ATCCTTGTTCTCTGATATTCAACTATAGAAAGCCAG...CTGAGTAAAGAGGGAGTTTAAGTCCAACCTGTGACACAGAGCCCTTGACCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTGTGCCACTTCCTCAGTaGTTTTCATGGCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSVPLPQ*FSWLHS
Trigger: AGAATGAAGCCATGAAAACCACTGAGGAAGTGGCAC...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGGTGCCACTTCCTCAGTaGTTTTCATGGCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQVPLPQ*FSWLHS
Trigger: AGAATGAAGCCATGAAAACCACTGAGGAAGTGGCAC...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGTGCTCAAGACACAGGTaGAACACAAGTTTATGCTTC +
Preference number: 4 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLCSRHR*NTSLCF
Trigger: GAAGCATAAACTTGTGTTCCACCTGTGTCTTGAGCA...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCTCAGCATAGCCCCTaGTGCCTTGATGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYSQHSP*CLDGEG
Trigger: TCCCTCCCCATCAAGGCACCAGGGGCTATGCTGAGA...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGAGCATAGCAATGCTATaGGCTGCTCTGATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWSIAML*AALISA
Trigger: TGCTGAGATCAGAGCAGCCCATAGCATTGCTATGCT...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp ACATTTCAAATGTTATCATCATTCCTGGTTTCACCTTaGAAACACCACTTTCCCCTCCCCTTAACCCTCCCC +
Preference number: 4 (lower is better)
Translates to: TFQMLSSFLVSP*KHHFPLPLTLP
Trigger: GGGGAGGGTTAAGGGGAGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp GATGCTTCTTGTGTGAGCATCAAATTAGACCAGTCATaGGATGTGATAGCTGTAAGCTGTGAGCCACCATTG +
Preference number: 4 (lower is better)
Translates to: DASCVSIKLDQS*DVIAVSCEPPL
Trigger: CAATGGTGGCTCACAGCTTACAGCTATCACATCCAATGACTGGTCTAATTTGATGCTCACACAAGAAGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp GTTGTACAAGCTTGCAATCCCACCAGCAATGGAAGATaGTTCCTATTTCTCTCCAGTATCTGCTGTCACCTA +
Preference number: 4 (lower is better)
Translates to: VVQACNPTSNGR*FLFLSSICCHL
Trigger: TAGGTGACAGCAGATACTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGTTGGGAACACAGTCATaGATAGAATTAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLLGTQS*IELRCW
Trigger: CCAGCATCTTAATTCTATTCATGACTGTGTTCCCAA...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR GCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGCAACACGATCTGAAGTaGCACTTCCTCAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWQHDLK*HFLSGF
Trigger: AAAACCACTGAGGAAGTGGCACTTCAGATCGTGTTG...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGTACAAATCACTTGTTTaGGTCTCAGTTGACATCCAG +
Preference number: 4 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQYKSLV*VSVDIQ
Trigger: CTGGATGTCAACTGAGACCCAAACAAGTGATTTGTA...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TTCATATGGTTGTCCCTTCTATGGGACTGCAAATCCTTCTGCTCCTTAGGTCCTTACAAATCACTTGTTTaGGTCTCAGTTGACATCCAG +
Preference number: 4 (lower is better)
Translates to: FIWLSLLWDCKSFCSLGPYKSLV*VSVDIQ
Trigger: CTGGATGTCAACTGAGACCCAAACAAGTGATTTGTA...AGGACCTAAGGAGCAGAAGGATTTGCAGTCCCATAGAAGGGACAACCATATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGATTATGTGTGTTCTGTaGACCACTGACTTTCATTGG +
Preference number: 4 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQIMCVL*TTDFHW
Trigger: CCAATGAAAGTCAGTGGTCCACAGAACACACATAAT...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGATTATGTGTGTTCTGTaGACCACTGACTTTCATTGG +
Preference number: 4 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLIMCVL*TTDFHW
Trigger: CCAATGAAAGTCAGTGGTCCACAGAACACACATAAT...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp CTTCCCAACGAGTACATACACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTAGCATAGCAATGCTATaGGCTGCTCTGATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LPNEYIHFCICQKLKELLSIAML*AALISA
Trigger: TGCTGAGATCAGAGCAGCCCATAGCATTGCTATGCT...AAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp TCTGAATGGTCATTCCCTCAGTCTCTAGTCCACACTTaGTCTTGTAACTCCTTCCATGGATATTTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: SEWSFPQSLVHT*SCNSFHGYFVP
Trigger: GGGAACAAAATATCCATGGAAGGAGTTACAAGACAAAGTGTGGACTAGAGACTGAGGGAATGACCATTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp TGTACAAGCTTGCAATCCCACCAGCAATGGAAGATTGTTCCTATTTCTCTCCAGTTGGGAACACAGTCATaGATAGAATTAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: CTSLQSHQQWKIVPISLQLGTQS*IELRCW
Trigger: CCAGCATCTTAATTCTATTCATGACTGTGTTCCCAA...CTGGAGAGAAATAGGAACAATCTTCCATTGCTGGTGGGATTGCAAGCTTGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp CTTCCCAACGAGTACATACACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTAACAGGAATAGCTTATaGCCTTGGACCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LPNEYIHFCICQKLKELLNRNSL*PWTFFL
Trigger: GAGGAAGAAGGTCCAAGGTCATAAGCTATTCCTGTT...AAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGCTGGCTTTCTATAGTTaGATATCAGAGAACAAGGAT +
Preference number: 4 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLLAFYS*ISENKD
Trigger: ATCCTTGTTCTCTGATATTCAACTATAGAAAGCCAG...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGCTGGCTTTCTATAGTTaGATATCAGAGAACAAGGAT +
Preference number: 4 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQLAFYS*ISENKD
Trigger: ATCCTTGTTCTCTGATATTCAACTATAGAAAGCCAG...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTATTATGTGTGTTCTGTaGACCACTGACTTTCATTGG +
Preference number: 4 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSIMCVL*TTDFHW
Trigger: CCAATGAAAGTCAGTGGTCCACAGAACACACATAAT...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TGGTGCATTGGAAAATTCATGGCATTTATGAGGGATATTAGGGATATTGTCTCCAGCATAGCAATGCTATaGGCTGCTCTGATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: WCIGKFMAFMRDIRDIVSSIAML*AALISA
Trigger: TGCTGAGATCAGAGCAGCCCATAGCATTGCTATGCT...GGAGACAATATCCCTAATATCCCTCATAAATGCCATGAATTTTCCAATGCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp TGGAGAAAGAGAAACACTCCTCCATTGCTAGTGGGATaGCAAGCTGGTAAAAACACTTTGGAAATCAGATTG +
Preference number: 4 (lower is better)
Translates to: WRKRNTPPLLVG*QAGKNTLEIRL
Trigger: CAATCTGATTTCCAAAGTGTTTTTACCAGCTTGCAATCCCACTAGCAATGGAGGAGTGTTTCTCTTTCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGTTGGGAACACAGTCATaGATAGAATTAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWLGTQS*IELRCW
Trigger: CCAGCATCTTAATTCTATTCATGACTGTGTTCCCAA...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp TTGATCCATTTTTATCTCCGTGTACAAAGCTCAAGTCCAAGTGAATCAAGGATCAACAGGAATAGCTTATaGCCTTGGACCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LIHFYLRVQSSSPSESRINRNSL*PWTFFL
Trigger: GAGGAAGAAGGTCCAAGGTCATAAGCTATTCCTGTT...GATCCTTGATTCACTTGGACTTGAGCTTTGTACACGGAGATAAAAATGGATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp CATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACTGAACAGGAATAGCTTATaGCCTTGGACCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HLEFHVVCELYLGYSKLLNRNSL*PWTFFL
Trigger: GAGGAAGAAGGTCCAAGGTCATAAGCTATTCCTGTT...CAGTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCCTGGCTTTCTATAGTTaGATATCAGAGAACAAGGAT +
Preference number: 4 (lower is better)
Translates to: VPLLEDLPGYKRRRESFILAFYS*ISENKD
Trigger: ATCCTTGTTCTCTGATATTCAACTATAGAAAGCCAG...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp TACTCCACACTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCCCTTCTCTGGCTTTCTATAGTTaGATATCAGAGAACAAGGAT +
Preference number: 4 (lower is better)
Translates to: YSTLCLCNSFHGYFVPPSLAFYS*ISENKD
Trigger: ATCCTTGTTCTCTGATATTCAACTATAGAAAGCCAG...AGAAGGGGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAAGTGTGGAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp CTTCCCAACGAGTACATACACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTCCTCAGTGGTTTTCATaGCTTCATTCTGAGAAGACA +
Preference number: 4 (lower is better)
Translates to: LPNEYIHFCICQKLKELLPQWFS*LHSEKT
Trigger: TGTCTTCTCAGAATGAAGCCATGAAAACCACTGAGG...AAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp GATCATTACCTAATGTTGCCTCTGTGTCTGTGCCTCTGCACACATCATCAGTTGATAAATATGGCATCATaGGCAAACCACAAGAACATA +
Preference number: 4 (lower is better)
Translates to: DHYLMLPLCLCLCTHHQLINMAS*ANHKNI
Trigger: TATGTTCTTGTGGTTTGCCCATGATGCCATATTTAT...CAACTGATGATGTGTGCAGAGGCACAGACACAGAGGCAACATTAGGTAATGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp GCTAGCAGTGTCTATATCTCTGGACTATCTGCTATCCCTTTCATGGTCACACAGATAAATATGGCATCATaGGCAAACCACAAGAACATA +
Preference number: 4 (lower is better)
Translates to: ASSVYISGLSAIPFMVTQINMAS*ANHKNI
Trigger: TATGTTCTTGTGGTTTGCCCATGATGCCATATTTAT...CTGTGTGACCATGAAAGGGATAGCAGATAGTCCAGAGATATAGACACTGCTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTAGCATAGCAATGCTATaGGCTGCTCTGATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPSIAML*AALISA
Trigger: TGCTGAGATCAGAGCAGCCCATAGCATTGCTATGCT...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTAACAGGAATAGCTTATaGCCTTGGACCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPNRNSL*PWTFFL
Trigger: GAGGAAGAAGGTCCAAGGTCATAAGCTATTCCTGTT...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR GCA 90 bp TTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACCAACACGATCTGAAGTaGCACTTCCTCAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: FILSFMWFVNCILGIPSYQHDLK*HFLSGF
Trigger: AAAACCACTGAGGAAGTGGCACTTCAGATCGTGTTG...GTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTGTGCCACTTCCTCAGTaGTTTTCATGGCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPVPLPQ*FSWLHS
Trigger: AGAATGAAGCCATGAAAACCACTGAGGAAGTGGCAC...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TGGTGCATTGGAAAATTCATGGCATTTATGAGGGATATTAGGGATATTGTCTCCTGCTCAAGACACAGGTaGAACACAAGTTTATGCTTC +
Preference number: 4 (lower is better)
Translates to: WCIGKFMAFMRDIRDIVSCSRHR*NTSLCF
Trigger: GAAGCATAAACTTGTGTTCCACCTGTGTCTTGAGCA...GGAGACAATATCCCTAATATCCCTCATAAATGCCATGAATTTTCCAATGCACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp CTTCCCAACGAGTACATACACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTATTATGTGTGTTCTGTaGACCACTGACTTTCATTGG +
Preference number: 4 (lower is better)
Translates to: LPNEYIHFCICQKLKELLIMCVL*TTDFHW
Trigger: CCAATGAAAGTCAGTGGTCCACAGAACACACATAAT...AAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp GTTCCACTACTGGAAGACTTGCCTGGTTACAAAAGAAGGAGAGAATCCTTCATCATAAATATGGCATCATaGGCAAACCACAAGAACATA +
Preference number: 4 (lower is better)
Translates to: VPLLEDLPGYKRRRESFIINMAS*ANHKNI
Trigger: TATGTTCTTGTGGTTTGCCCATGATGCCATATTTAT...GATGAAGGATTCTCTCCTTCTTTTGTAACCAGGCAAGTCTTCCAGTAGTGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp TGGTGCATTGGAAAATTCATGGCATTTATGAGGGATATTAGGGATATTGTCTCCTTGGGAACACAGTCATaGATAGAATTAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: WCIGKFMAFMRDIRDIVSLGTQS*IELRCW
Trigger: CCAGCATCTTAATTCTATTCATGACTGTGTTCCCAA...GGAGACAATATCCCTAATATCCCTCATAAATGCCATGAATTTTCCAATGCACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATAACAGGAATAGCTTATaGCCTTGGACCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYNRNSL*PWTFFL
Trigger: GAGGAAGAAGGTCCAAGGTCATAAGCTATTCCTGTT...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp CTTCCCAACGAGTACATACACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTCTGGCTTTCTATAGTTaGATATCAGAGAACAAGGAT +
Preference number: 4 (lower is better)
Translates to: LPNEYIHFCICQKLKELLLAFYS*ISENKD
Trigger: ATCCTTGTTCTCTGATATTCAACTATAGAAAGCCAG...AAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR GCA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATCAACACGATCTGAAGTaGCACTTCCTCAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYQHDLK*HFLSGF
Trigger: AAAACCACTGAGGAAGTGGCACTTCAGATCGTGTTG...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACCCTCAGTGGTTTTCATaGCTTCATTCTGAGAAGACA +
Preference number: 4 (lower is better)
Translates to: FILSFMWFVNCILGIPSYPQWFS*LHSEKT
Trigger: TGTCTTCTCAGAATGAAGCCATGAAAACCACTGAGG...GTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTCCTCAGTGGTTTTCATaGCTTCATTCTGAGAAGACA +
Preference number: 4 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPPQWFS*LHSEKT
Trigger: TGTCTTCTCAGAATGAAGCCATGAAAACCACTGAGG...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATGTGCCACTTCCTCAGTaGTTTTCATGGCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYVPLPQ*FSWLHS
Trigger: AGAATGAAGCCATGAAAACCACTGAGGAAGTGGCAC...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TGGTGCATTGGAAAATTCATGGCATTTATGAGGGATATTAGGGATATTGTCTCCTACAAATCACTTGTTTaGGTCTCAGTTGACATCCAG +
Preference number: 4 (lower is better)
Translates to: WCIGKFMAFMRDIRDIVSYKSLV*VSVDIQ
Trigger: CTGGATGTCAACTGAGACCCAAACAAGTGATTTGTA...GGAGACAATATCCCTAATATCCCTCATAAATGCCATGAATTTTCCAATGCACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TTGATCCATTTTTATCTCCGTGTACAAAGCTCAAGTCCAAGTGAATCAAGGATCTACAAATCACTTGTTTaGGTCTCAGTTGACATCCAG +
Preference number: 4 (lower is better)
Translates to: LIHFYLRVQSSSPSESRIYKSLV*VSVDIQ
Trigger: CTGGATGTCAACTGAGACCCAAACAAGTGATTTGTA...GATCCTTGATTCACTTGGACTTGAGCTTTGTACACGGAGATAAAAATGGATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACTGCTCAAGACACAGGTaGAACACAAGTTTATGCTTC +
Preference number: 4 (lower is better)
Translates to: FILSFMWFVNCILGIPSYCSRHR*NTSLCF
Trigger: GAAGCATAAACTTGTGTTCCACCTGTGTCTTGAGCA...GTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp CATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACTGATTATGTGTGTTCTGTaGACCACTGACTTTCATTGG +
Preference number: 4 (lower is better)
Translates to: HLEFHVVCELYLGYSKLLIMCVL*TTDFHW
Trigger: CCAATGAAAGTCAGTGGTCCACAGAACACACATAAT...CAGTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp TCCACACTTTGTCTTGTAACTCCTTCCATGGATATTTaGTTCCCCCTTCTAAGAAGTATCAAAGTATCCAGT +
Preference number: 4 (lower is better)
Translates to: STLCLVTPSMDI*FPLLRSIKVSS
Trigger: ACTGGATACTTTGATACTTCTTAGAAGGGGGAACAAAATATCCATGGAAGGAGTTACAAGACAAAGTGTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp TGGTGCATTGGAAAATTCATGGCATTTATGAGGGATATTAGGGATATTGTCTCCCTGGCTTTCTATAGTTaGATATCAGAGAACAAGGAT +
Preference number: 4 (lower is better)
Translates to: WCIGKFMAFMRDIRDIVSLAFYS*ISENKD
Trigger: ATCCTTGTTCTCTGATATTCAACTATAGAAAGCCAG...GGAGACAATATCCCTAATATCCCTCATAAATGCCATGAATTTTCCAATGCACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATCCTCAGTGGTTTTCATaGCTTCATTCTGAGAAGACA +
Preference number: 4 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYPQWFS*LHSEKT
Trigger: TGTCTTCTCAGAATGAAGCCATGAAAACCACTGAGG...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTTACAAATCACTTGTTTaGGTCTCAGTTGACATCCAG +
Preference number: 4 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPYKSLV*VSVDIQ
Trigger: CTGGATGTCAACTGAGACCCAAACAAGTGATTTGTA...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTGCTCAAGACACAGGTaGAACACAAGTTTATGCTTC +
Preference number: 4 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYCSRHR*NTSLCF
Trigger: GAAGCATAAACTTGTGTTCCACCTGTGTCTTGAGCA...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp CCATTGCTAGTGGGATTGCAAGCTGGTAAAAACACTTaGGAAATCAGATTGGTAGTTGTTCAGAAAAATGAA +
Preference number: 4 (lower is better)
Translates to: PLLVGLQAGKNT*EIRLVVVQKNE
Trigger: TTCATTTTTCTGAACAACTACCAATCTGATTTCCAAAGTGTTTTTACCAGCTTGCAATCCCACTAGCAATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp TGGCAGAATATCATTAGGAATGATTTCAATAAGGCTTaGCTAGCAGTGTCTATATCTCTGGACTATCTGCTA +
Preference number: 4 (lower is better)
Translates to: WQNIIRNDFNKA*LAVSISLDYLL
Trigger: TAGCAGATAGTCCAGAGATATAGACACTGCTAGCAAAGCCTTATTGAAATCATTCCTAATGATATTCTGCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp GCTATCAAGAAGGAGCTTATAGATTGGTCATGTAACTaGGTCCTTCTGCATGAACAAAAATTGGTCTTAACT +
Preference number: 4 (lower is better)
Translates to: AIKKELIDWSCN*VLLHEQKLVLT
Trigger: AGTTAAGACCAATTTTTGTTCATGCAGAAGGACCAAGTTACATGACCAATCTATAAGCTCCTTCTTGATAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR TCA 90 bp TTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACCTGGCTTTCTATAGTTaGATATCAGAGAACAAGGAT +
Preference number: 4 (lower is better)
Translates to: FILSFMWFVNCILGIPSYLAFYS*ISENKD
Trigger: ATCCTTGTTCTCTGATATTCAACTATAGAAAGCCAG...GTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTACAAATCACTTGTTTaGGTCTCAGTTGACATCCAG +
Preference number: 4 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYYKSLV*VSVDIQ
Trigger: CTGGATGTCAACTGAGACCCAAACAAGTGATTTGTA...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp CATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACTGATAAATATGGCATCATaGGCAAACCACAAGAACATA +
Preference number: 4 (lower is better)
Translates to: HLEFHVVCELYLGYSKLLINMAS*ANHKNI
Trigger: TATGTTCTTGTGGTTTGCCCATGATGCCATATTTAT...CAGTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CCA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTATAAATATGGCATCATaGGCAAACCACAAGAACATA +
Preference number: 4 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPINMAS*ANHKNI
Trigger: TATGTTCTTGTGGTTTGCCCATGATGCCATATTTAT...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp TTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTaGGGTATTCCAAGCTACTGGGCTAATATTCTATTA +
Preference number: 4 (lower is better)
Translates to: FILSFMWFVNCI*GIPSYWANILL
Trigger: TAATAGAATATTAGCCCAGTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
3UTR CAA 72 bp TTCATCTTGAGTTTCATATGGTGTATGAATTGCATCTaGGGTATTGCAATTTTCTGGGCTAATATCCTCTTA +
Preference number: 4 (lower is better)
Translates to: FILSFIWCMNCI*GIAIFWANILL
Trigger: TAAGAGGATATTAGCCCAGAAAATTGCAATACCCAAGATGCAATTCATACACCATATGAAACTCAAGATGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CAA 90 bp CCTACCTACCCACTCACACTTCTTGGCCCTGGCACTCCCCTTACTGGGACATATATCATCTCACCAAAATaGCCAGGAAGAAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: PTYPLTLLGPGTPLTGTYIISPK*PGRRVT
Trigger: TGTCACTCTTCTTCCTGGCAATTTTGGTGAGATGAT...ATATGTCCCAGTAAGGGGAGTGCCAGGGCCAAGAAGTGTGAGTGGGTAGGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CAA 90 bp TATTCTTTGGCTGGTGTAAGAGGAGAGGTCAGGGTCAAGGGCTCTGTGTCACAGATCATCTCACCAAAATaGCCAGGAAGAAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: YSLAGVRGEVRVKGSVSQIISPK*PGRRVT
Trigger: TGTCACTCTTCTTCCTGGCAATTTTGGTGAGATGAT...CTGTGACACAGAGCCCTTGACCCTGACCTCTCCTCTTACACCAGCCAAAGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CAA 90 bp TATTCTTTGGCTGGTGTAAGAGGAGAGGTCAGGGTCAAGGGCTCTGTGTCACAGGTTAGTACAAATCACTaGTTTGGGTCTCAGTTGACA +
Preference number: 5 (lower is better)
Translates to: YSLAGVRGEVRVKGSVSQVSTNH*FGSQLT
Trigger: TGTCAACTGAGACCCAAACAAGTGATTTGTACTAAC...CTGTGACACAGAGCCCTTGACCCTGACCTCTCCTCTTACACCAGCCAAAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CAA 90 bp CTGGCAGAGCCTCTCATGAGACAGCTATATCAGGCTCCTGACAACAAGAACTTGATCATCTCACCAAAATaGCCAGGAAGAAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: LAEPLMRQLYQAPDNKNLIISPK*PGRRVT
Trigger: TGTCACTCTTCTTCCTGGCAATTTTGGTGAGATGAT...CAAGTTCTTGTTGTCAGGAGCCTGATATAGCTGTCTCATGAGAGGCTCTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CAA 90 bp TCAGGGTCAAGGGCTCTGTGTCACAGGTTGGACTTAAACTCCCTCTTTACTCAGATCATCTCACCAAAATaGCCAGGAAGAAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: SGSRALCHRLDLNSLFTQIISPK*PGRRVT
Trigger: TGTCACTCTTCTTCCTGGCAATTTTGGTGAGATGAT...CTGAGTAAAGAGGGAGTTTAAGTCCAACCTGTGACACAGAGCCCTTGACCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CAA 90 bp TCAGGGTCAAGGGCTCTGTGTCACAGGTTGGACTTAAACTCCCTCTTTACTCAGGTTAGTACAAATCACTaGTTTGGGTCTCAGTTGACA +
Preference number: 5 (lower is better)
Translates to: SGSRALCHRLDLNSLFTQVSTNH*FGSQLT
Trigger: TGTCAACTGAGACCCAAACAAGTGATTTGTACTAAC...CTGAGTAAAGAGGGAGTTTAAGTCCAACCTGTGACACAGAGCCCTTGACCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CAA 90 bp TTCATATGGTTGTCCCTTCTATGGGACTGCAAATCCTTCTGCTCCTTAGGTCCTATCATCTCACCAAAATaGCCAGGAAGAAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: FIWLSLLWDCKSFCSLGPIISPK*PGRRVT
Trigger: TGTCACTCTTCTTCCTGGCAATTTTGGTGAGATGAT...AGGACCTAAGGAGCAGAAGGATTTGCAGTCCCATAGAAGGGACAACCATATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CAA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGTTGTTTGGGTCTCAGTaGACATCCAGTCAAAAGTGG +
Preference number: 5 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWLFGSQ*TSSQKW
Trigger: CCACTTTTGACTGGATGTCAACTGAGACCCAAACAA...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CAA 90 bp CTTCCCAACGAGTACATACACTTCTGCATTTGTCAGAAACTGAAAGAGCTTCTTTTGTTTGGGTCTCAGTaGACATCCAGTCAAAAGTGG +
Preference number: 5 (lower is better)
Translates to: LPNEYIHFCICQKLKELLLFGSQ*TSSQKW
Trigger: CCACTTTTGACTGGATGTCAACTGAGACCCAAACAA...AAGAAGCTCTTTCAGTTTCTGACAAATGCAGAAGTGTATGTACTCGTTGGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS TCA 90 bp CTGGACACAGCCATGTTAGTACAAATCACTTGTTTGGGTCTCAGTTaGCATCCAGTCAAAAGTGGAGAGAAATTATGGATAAACAGAAGG +
Preference number: 5 (lower is better)
Translates to: LDTAMLVQITCLGLS*HPVKSGEKLWINRR
Trigger: CCTTCTGTTTATCCATAATTTCTCTCCACTTTTGACTGGATGTCAACTGAGACCCAAACAAGTGATTTGTACTAACATGGCTGTGTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CAA 90 bp CATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACTGTTGTTTGGGTCTCAGTaGACATCCAGTCAAAAGTGG +
Preference number: 5 (lower is better)
Translates to: HLEFHVVCELYLGYSKLLLFGSQ*TSSQKW
Trigger: CCACTTTTGACTGGATGTCAACTGAGACCCAAACAA...CAGTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CAA 90 bp TTTTCTGTACACATTCCTCTGTTGAGTGACATCTGGGTTCTATCCACTTTCTGGGTTAGTACAAATCACTaGTTTGGGTCTCAGTTGACA +
Preference number: 5 (lower is better)
Translates to: FSVHIPLLSDIWVLSTFWVSTNH*FGSQLT
Trigger: TGTCAACTGAGACCCAAACAAGTGATTTGTACTAAC...CCAGAAAGTGGATAGAACCCAGATGTCACTCAACAGAGGAATGTGTACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CAA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTTTGTTTGGGTCTCAGTaGACATCCAGTCAAAAGTGG +
Preference number: 5 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPLFGSQ*TSSQKW
Trigger: CCACTTTTGACTGGATGTCAACTGAGACCCAAACAA...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CAA 90 bp TTGATCCATTTTTATCTCCGTGTACAAAGCTCAAGTCCAAGTGAATCAAGGATCATCATCTCACCAAAATaGCCAGGAAGAAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: LIHFYLRVQSSSPSESRIIISPK*PGRRVT
Trigger: TGTCACTCTTCTTCCTGGCAATTTTGGTGAGATGAT...GATCCTTGATTCACTTGGACTTGAGCTTTGTACACGGAGATAAAAATGGATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CAA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTTGTTTGGGTCTCAGTaGACATCCAGTCAAAAGTGG +
Preference number: 5 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYLFGSQ*TSSQKW
Trigger: CCACTTTTGACTGGATGTCAACTGAGACCCAAACAA...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CAA 90 bp CATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACTGGTTAGTACAAATCACTaGTTTGGGTCTCAGTTGACA +
Preference number: 5 (lower is better)
Translates to: HLEFHVVCELYLGYSKLLVSTNH*FGSQLT
Trigger: TGTCAACTGAGACCCAAACAAGTGATTTGTACTAAC...CAGTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CAA 90 bp TTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATTCCAAGCTACGTTAGTACAAATCACTaGTTTGGGTCTCAGTTGACA +
Preference number: 5 (lower is better)
Translates to: FILSFMWFVNCILGIPSYVSTNH*FGSQLT
Trigger: TGTCAACTGAGACCCAAACAAGTGATTTGTACTAAC...GTAGCTTGGAATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CAA 90 bp ATTTCAAATGTTATCATCATTCCTGGTTTCACCTTTGAAACACCACTTTCCCCTGTTAGTACAAATCACTaGTTTGGGTCTCAGTTGACA +
Preference number: 5 (lower is better)
Translates to: ISNVIIIPGFTFETPLSPVSTNH*FGSQLT
Trigger: TGTCAACTGAGACCCAAACAAGTGATTTGTACTAAC...AGGGGAAAGTGGTGTTTCAAAGGTGAAACCAGGAATGATGATAACATTTGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS-3UTR CAA 90 bp TTTGTCTTCCTTCATCTTGAGTTTCATGTGGTTTGTGAATTGTATCTTGGGTATATCATCTCACCAAAATaGCCAGGAAGAAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: FVFLHLEFHVVCELYLGYIISPK*PGRRVT
Trigger: TGTCACTCTTCTTCCTGGCAATTTTGGTGAGATGAT...ATACCCAAGATACAATTCACAAACCACATGAAACTCAAGATGAAGGAAGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS GCA 72 bp CCCTATTCCAAACTGACAAAGCAACACGATCTGAAGTaGCACTTCCTCAGTGGTTTTCATGGCTTCATTCTG +
Preference number: 6 (lower is better)
Translates to: PYSKLTKQHDLK*HFLSGFHGFIL
Trigger: CAGAATGAAGCCATGAAAACCACTGAGGAAGTGGCACTTCAGATCGTGTTGCTTTGTCAGTTTGGAATAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS CCA 72 bp CTGGTCCAGATCATGATGCTGATAAATATGGCATCATaGGCAAACCACAAGAACATAATGCCTACACTGAAG +
Preference number: 6 (lower is better)
Translates to: LVQIMMLINMAS*ANHKNIMPTLK
Trigger: CTTCAGTGTAGGCATTATGTTCTTGTGGTTTGCCCATGATGCCATATTTATCAGCATCATGATCTGGACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS CAA 90 bp GCTGGACACAGCCATGTTAGTACAAATCACTTGTTTGGGTCTCAGTaGACATCCAGTCAAAAGTGGAGAGAAATTATGGATAAACAGAAG +
Preference number: 6 (lower is better)
Translates to: AGHSHVSTNHLFGSQ*TSSQKWREIMDKQK
Trigger: CTTCTGTTTATCCATAATTTCTCTCCACTTTTGACTGGATGTCAACTGAGACCCAAACAAGTGATTTGTACTAACATGGCTGTGTCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS GCA 72 bp CACAGGTGGAACACAAGTTTATGCTTCTTGCTACCATaGGTAGGAAGTATTCAAGTTTACATTGAAGGTCAT +
Preference number: 6 (lower is better)
Translates to: HRWNTSLCFLLP*VGSIQVYIEGH
Trigger: ATGACCTTCAATGTAAACTTGAATACTTCCTACGCATGGTAGCAAGAAGCATAAACTTGTGTTCCACCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226510.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS TCA 72 bp GCCATGTTAGTACAAATCACTTGTTTGGGTCTCAGTTaGCATCCAGTCAAAAGTGGAGAGAAATTATGGATA +
Preference number: 6 (lower is better)
Translates to: AMLVQITCLGLS*HPVKSGEKLWI
Trigger: TATCCATAATTTCTCTCCACTTTTGACTGGATGTCAACTGAGACCCAAACAAGTGATTTGTACTAACATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2
CDS CAA 72 bp AGCCATGTTAGTACAAATCACTTGTTTGGGTCTCAGTaGACATCCAGTCAAAAGTGGAGAGAAATTATGGAT +
Preference number: 6 (lower is better)
Translates to: SHVSTNHLFGSQ*TSSQKWREIMD
Trigger: ATCCATAATTTCTCTCCACTTTTGACTGGATGTCAACTGAGACCCAAACAAGTGATTTGTACTAACATGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000185220.3
ENSMUST00000226264.2
ENSMUST00000226802.2
ENSMUST00000227566.2
ENSMUST00000227692.2
ENSMUST00000227788.2
ENSMUST00000227855.2