Pregenerated sensors for VMN1R89 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095629

Ensembl transcript IDs: ENSMUST00000053008.5, ENSMUST00000226717.2, ENSMUST00000227176.2, ENSMUST00000227239.2, ENSMUST00000227276.2, ENSMUST00000227319.2, ENSMUST00000227390.2, ENSMUST00000228587.2

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GGCTTCTACTGTGGAGATGCTGGGATCTCTTGTAGTGTCTCCTCTTaGTCTGAGTGTGGAGTGCTTCAAACCCTCGTTCAGCGCAGTGTG	+
Preference number: 5 (lower is better) Translates to: GFYCGDAGISCSVSS*SECGVLQTLVQRSV Trigger: CACACTGCGCTGAACGAGGGTTTGAAGCACTCCACACTCAGAGCAAGAGGAGACACTACAAGAGATCCCAGCATCTCCACAGTAGAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227319.2
CDS GCA 90 bp	TTAACACAAAGCAGCTCACCAGAGACAGGATGTTATGAGTGGCTTTaGGCTCAGGAGATGACTGGGAGGAAAGGCTTCTACTGTGGAGAT	+
Preference number: 5 (lower is better) Translates to: LTQSSSPETGCYEWL*AQEMTGRKGFYCGD Trigger: ATCTCCACAGTAGAAGCCTTTCCTCCCAGTCATCTCCTGAGCGCAAAGCCACTCATAACATCCTGTCTCTGGTGAGCTGCTTTGTGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000053008.5 ENSMUST00000226717.2 ENSMUST00000227176.2 ENSMUST00000227239.2 ENSMUST00000227276.2 ENSMUST00000227319.2 ENSMUST00000227390.2 ENSMUST00000228587.2
CDS CCA 90 bp	AATAAATTAACACAAAGCAGCTCACCAGAGACAGGATGTTATGAGTaGCTTTGCGCTCAGGAGATGACTGGGAGGAAAGGCTTCTACTGT	+
Preference number: 5 (lower is better) Translates to: NKLTQSSSPETGCYE*LCAQEMTGRKGFYC Trigger: ACAGTAGAAGCCTTTCCTCCCAGTCATCTCCTGAGCGCAAAGCCACTCATAACATCCTGTCTCTGGTGAGCTGCTTTGTGTTAATTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000053008.5 ENSMUST00000226717.2 ENSMUST00000227176.2 ENSMUST00000227239.2 ENSMUST00000227276.2 ENSMUST00000227319.2 ENSMUST00000227390.2 ENSMUST00000228587.2
CDS TCA 72 bp	TCTGACACCTTTTCCTGGCTTCCTGGAGTCCTGAACTaGTGTGCTCCTCTTGCTCTGAGTGTGGAGTGCTTC	+
Preference number: 6 (lower is better) Translates to: SDTFSWLPGVLN*CAPLALSVECF Trigger: GAAGCACTCCACACTCAGAGCAAGAGGAGCACATCAGTTCAGGACTCCAGGAAGCCAGGAAAAGGTGTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227276.2
CDS GCA 72 bp	AGCAGCTCACCAGAGACAGGATGTTATGAGTGGCTTTaGGCTCAGGAGATGACTGGGAGGAAAGGCTTCTAC	+
Preference number: 6 (lower is better) Translates to: SSSPETGCYEWL*AQEMTGRKGFY Trigger: GTAGAAGCCTTTCCTCCCAGTCATCTCCTGAGCGCAAAGCCACTCATAACATCCTGTCTCTGGTGAGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000053008.5 ENSMUST00000226717.2 ENSMUST00000227176.2 ENSMUST00000227239.2 ENSMUST00000227276.2 ENSMUST00000227319.2 ENSMUST00000227390.2 ENSMUST00000228587.2
CDS GCA 72 bp	TCTCTTGTAGTGTCTCCTCTTGCTCTGAGTGTGGAGTaGTTCAAACCCTCGTTCAGCGCAGTGTGGATCCAC	+
Preference number: 6 (lower is better) Translates to: SLVVSPLALSVE*FKPSFSAVWIH Trigger: GTGGATCCACACTGCGCTGAACGAGGGTTTGAAGCACTCCACACTCAGAGCAAGAGGAGACACTACAAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227319.2
CDS CCA 72 bp	ACACAAAGCAGCTCACCAGAGACAGGATGTTATGAGTaGCTTTGCGCTCAGGAGATGACTGGGAGGAAAGGC	+
Preference number: 6 (lower is better) Translates to: TQSSSPETGCYE*LCAQEMTGRKG Trigger: GCCTTTCCTCCCAGTCATCTCCTGAGCGCAAAGCCACTCATAACATCCTGTCTCTGGTGAGCTGCTTTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000053008.5 ENSMUST00000226717.2 ENSMUST00000227176.2 ENSMUST00000227239.2 ENSMUST00000227276.2 ENSMUST00000227319.2 ENSMUST00000227390.2 ENSMUST00000228587.2
CDS GCA 72 bp	TGTGGAGATGCTGGGATCTCTTGTAGTGTCTCCTCTTaGTCTGAGTGTGGAGTGCTTCAAACCCTCGTTCAG	+
Preference number: 6 (lower is better) Translates to: CGDAGISCSVSS*SECGVLQTLVQ Trigger: CTGAACGAGGGTTTGAAGCACTCCACACTCAGAGCAAGAGGAGACACTACAAGAGATCCCAGCATCTCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227319.2
CDS TCA 72 bp	ATTAACACAAAGCAGCTCACCAGAGACAGGATGTTATaGGTGGCTTTGCGCTCAGGAGATGACTGGGAGGAA	+
Preference number: 6 (lower is better) Translates to: INTKQLTRDRML*VALRSGDDWEE Trigger: TTCCTCCCAGTCATCTCCTGAGCGCAAAGCCACTCATAACATCCTGTCTCTGGTGAGCTGCTTTGTGTTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000053008.5 ENSMUST00000226717.2 ENSMUST00000227176.2 ENSMUST00000227239.2 ENSMUST00000227276.2 ENSMUST00000227319.2 ENSMUST00000227390.2 ENSMUST00000228587.2
CDS CCA 72 bp	AACAGTGATGAGTTCCCTATCACACCAAGACAAAACTaGAATATGAGAAAGATCTGGAAGAATGTGTCACTT	+
Preference number: 6 (lower is better) Translates to: NSDEFPITPRQN*NMRKIWKNVSL Trigger: AAGTGACACATTCTTCCAGATCTTTCTCATATTCCAGTTTTGTCTTGGTGTGATAGGGAACTCATCACTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053008.5 ENSMUST00000226717.2 ENSMUST00000227176.2 ENSMUST00000227239.2 ENSMUST00000228587.2
CDS CCA 72 bp	AACCATCTGAATATCCATTGCCAACATGGGTTTTATTaGTTTTGGCTATTACCATGTCAAGCATATACCCGT	+
Preference number: 6 (lower is better) Translates to: NHLNIHCQHGFY*FWLLPCQAYTR Trigger: ACGGGTATATGCTTGACATGGTAATAGCCAAAACCAATAAAACCCATGTTGGCAATGGATATTCAGATGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000053008.5 ENSMUST00000226717.2 ENSMUST00000227176.2 ENSMUST00000227239.2 ENSMUST00000227276.2 ENSMUST00000227390.2 ENSMUST00000228587.2
CDS TCA 72 bp	ATGAGTTCCCTATCACACCAAGACAAAACTGGAATATaGGAAAGATCTGGAAGAATGTGTCACTTGAAAACA	+
Preference number: 6 (lower is better) Translates to: MSSLSHQDKTGI*ERSGRMCHLKT Trigger: TGTTTTCAAGTGACACATTCTTCCAGATCTTTCTCATATTCCAGTTTTGTCTTGGTGTGATAGGGAACTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000053008.5 ENSMUST00000226717.2 ENSMUST00000227176.2 ENSMUST00000227239.2 ENSMUST00000228587.2