Pregenerated sensors for VMN1R87 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070815Ensembl transcript IDs: ENSMUST00000094827.2, ENSMUST00000211249.3, ENSMUST00000227443.2, ENSMUST00000228800.2
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AACCTGAGTTCAATTATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACCAGTTCCAGGGACTCTaGCTTTCACATATTAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: NLSSIICPELTWQLTTVYQFQGL*LSHIKK Trigger: TTTCTTAATATGTGAAAGTCAGAGTCCCTGGAACTG...GTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATAATTGAACTCAGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| 3UTR-3UTR GCA 90 bp | TATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACAATTCCAGTTCCAGTTATATACTCAGGCATaGTATGGCTATTTTGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: YMPRTHMAAHNCLQFQFQLYTQA*YGYFAH Trigger: ATGAGCAAAATAGCCATAGCATGCCTGAGTATATAA...CTGGAACTGGAATTGTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| 3UTR-3UTR CCA 90 bp | TATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACAATTCCAGTTCCAGTCAATTCCTACTACCTaGATATTATATACTCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: YMPRTHMAAHNCLQFQFQSIPTT*ILYTQA Trigger: TGCCTGAGTATATAATATCCAGGTAGTAGGAATTGA...CTGGAACTGGAATTGTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| 3UTR-3UTR GCA 90 bp | AACCTGAGTTCAATTATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACTTATATACTCAGGCATaGTATGGCTATTTTGCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: NLSSIICPELTWQLTTVYLYTQA*YGYFAH Trigger: ATGAGCAAAATAGCCATAGCATGCCTGAGTATATAA...GTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATAATTGAACTCAGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGGCACTGGTTGTTCTCCCATAGAACCTGAGTTCAATTATATGCCCAGAACTTTATATACTCAGGCATaGTATGGCTATTTTGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: KGTGCSPIEPEFNYMPRTLYTQA*YGYFAH Trigger: ATGAGCAAAATAGCCATAGCATGCCTGAGTATATAA...AGTTCTGGGCATATAATTGAACTCAGGTTCTATGGGAGAACAACCAGTGCCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| 3UTR-3UTR CCA 90 bp | AACCTGAGTTCAATTATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACTCAATTCCTACTACCTaGATATTATATACTCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: NLSSIICPELTWQLTTVYSIPTT*ILYTQA Trigger: TGCCTGAGTATATAATATCCAGGTAGTAGGAATTGA...GTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATAATTGAACTCAGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CCA 90 bp | AAGGGCACTGGTTGTTCTCCCATAGAACCTGAGTTCAATTATATGCCCAGAACTGACTTGGTGGTGTGGTaGCGAACCTGGCTACTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KGTGCSPIEPEFNYMPRTDLVVW*RTWLLR Trigger: CCGAAGTAGCCAGGTTCGCCACCACACCACCAAGTC...AGTTCTGGGCATATAATTGAACTCAGGTTCTATGGGAGAACAACCAGTGCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CCA 90 bp | CTACTACCTGGATATTATATACTCAGGCATGCTATGGCTATTTTGCTCATGTGGGACTTGGTGGTGTGGTaGCGAACCTGGCTACTTCGG | + |
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Preference number: 4 (lower is better) Translates to: LLPGYYILRHAMAILLMWDLVVW*RTWLLR Trigger: CCGAAGTAGCCAGGTTCGCCACCACACCACCAAGTC...CCACATGAGCAAAATAGCCATAGCATGCCTGAGTATATAATATCCAGGTAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CCA 90 bp | TATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACAATTCCAGTTCCAGCAGTTACAAGTGACTTaGTGGTGTGGTGGCGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: YMPRTHMAAHNCLQFQFQQLQVT*WCGGEP Trigger: AGGTTCGCCACCACACCACCAAGTCACTTGTAACTG...CTGGAACTGGAATTGTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR TCA 90 bp | TATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACAATTCCAGTTCCAGGGCTGGACCATATCATaGGAAACACAAACAGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: YMPRTHMAAHNCLQFQFQGWTIS*ETQTGR Trigger: ACGTCCTGTTTGTGTTTCTCATGATATGGTCCAGCC...CTGGAACTGGAATTGTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CCA 90 bp | TATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACAATTCCAGTTCCAGAGCAGAAGGATGCTGTaGGTGGCTCTCTTTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YMPRTHMAAHNCLQFQFQSRRML*VALFSE Trigger: TTCTGAAAAGAGAGCCACCCACAGCATCCTTCTGCT...CTGGAACTGGAATTGTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR TCA 90 bp | AAGGGCACTGGTTGTTCTCCCATAGAACCTGAGTTCAATTATATGCCCAGAACTGGCTGGACCATATCATaGGAAACACAAACAGGACGT | + |
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Preference number: 4 (lower is better) Translates to: KGTGCSPIEPEFNYMPRTGWTIS*ETQTGR Trigger: ACGTCCTGTTTGTGTTTCTCATGATATGGTCCAGCC...AGTTCTGGGCATATAATTGAACTCAGGTTCTATGGGAGAACAACCAGTGCCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR TCA 90 bp | AAGGGCACTGGTTGTTCTCCCATAGAACCTGAGTTCAATTATATGCCCAGAACTTACTCCTATTGTGTCTaGAGAGGAGGCTCACCATGT | + |
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Preference number: 4 (lower is better) Translates to: KGTGCSPIEPEFNYMPRTYSYCV*RGGSPC Trigger: ACATGGTGAGCCTCCTCTTCAGACACAATAGGAGTA...AGTTCTGGGCATATAATTGAACTCAGGTTCTATGGGAGAACAACCAGTGCCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR TCA 90 bp | AACCTGAGTTCAATTATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACTACTCCTATTGTGTCTaGAGAGGAGGCTCACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: NLSSIICPELTWQLTTVYYSYCV*RGGSPC Trigger: ACATGGTGAGCCTCCTCTTCAGACACAATAGGAGTA...GTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATAATTGAACTCAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CCA 90 bp | AACCTGAGTTCAATTATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACAGCAGAAGGATGCTGTaGGTGGCTCTCTTTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLSSIICPELTWQLTTVYSRRML*VALFSE Trigger: TTCTGAAAAGAGAGCCACCCACAGCATCCTTCTGCT...GTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATAATTGAACTCAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CCA 90 bp | AAGGGCACTGGTTGTTCTCCCATAGAACCTGAGTTCAATTATATGCCCAGAACTAGCAGAAGGATGCTGTaGGTGGCTCTCTTTTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: KGTGCSPIEPEFNYMPRTSRRML*VALFSE Trigger: TTCTGAAAAGAGAGCCACCCACAGCATCCTTCTGCT...AGTTCTGGGCATATAATTGAACTCAGGTTCTATGGGAGAACAACCAGTGCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR GCA 90 bp | TATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACAATTCCAGTTCCAGGAAAAGGATCCTGACTaGAAAGGATCTCATGACATC | + |
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Preference number: 4 (lower is better) Translates to: YMPRTHMAAHNCLQFQFQEKDPD*KGSHDI Trigger: GATGTCATGAGATCCTTTGCAGTCAGGATCCTTTTC...CTGGAACTGGAATTGTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR TCA 90 bp | TATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACAATTCCAGTTCCAGTGTACATGTATAGTATaGAGAGGAGCAAGTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: YMPRTHMAAHNCLQFQFQCTCIV*RGASFP Trigger: TGGGAAACTTGCTCCTCTTCATACTATACATGTACA...CTGGAACTGGAATTGTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR TCA 90 bp | AAGGGCACTGGTTGTTCTCCCATAGAACCTGAGTTCAATTATATGCCCAGAACTCAAGCATTAGATGTGTaGAGATCATATCTACGGGCT | + |
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Preference number: 4 (lower is better) Translates to: KGTGCSPIEPEFNYMPRTQALDV*RSYLRA Trigger: AGCCCGTAGATATGATCTTCACACATCTAATGCTTG...AGTTCTGGGCATATAATTGAACTCAGGTTCTATGGGAGAACAACCAGTGCCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR TCA 90 bp | AACCTGAGTTCAATTATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACCTGAGAGTGATGGCTTaGAATACACTTAGTAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: NLSSIICPELTWQLTTVYLRVMA*NTLSSK Trigger: CTTGCTACTAAGTGTATTTCAAGCCATCACTCTCAG...GTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATAATTGAACTCAGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR TCA 90 bp | CTACTACCTGGATATTATATACTCAGGCATGCTATGGCTATTTTGCTCATGTGGGGCTGGACCATATCATaGGAAACACAAACAGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: LLPGYYILRHAMAILLMWGWTIS*ETQTGR Trigger: ACGTCCTGTTTGTGTTTCTCATGATATGGTCCAGCC...CCACATGAGCAAAATAGCCATAGCATGCCTGAGTATATAATATCCAGGTAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR GCA 90 bp | AACCTGAGTTCAATTATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACGAAAAGGATCCTGACTaGAAAGGATCTCATGACATC | + |
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Preference number: 4 (lower is better) Translates to: NLSSIICPELTWQLTTVYEKDPD*KGSHDI Trigger: GATGTCATGAGATCCTTTGCAGTCAGGATCCTTTTC...GTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATAATTGAACTCAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CCA 90 bp | TATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACAATTCCAGTTCCAGATACTGGGTTGCTCTTaGGTTGGTAAAGTGAATAGA | + |
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Preference number: 4 (lower is better) Translates to: YMPRTHMAAHNCLQFQFQILGCS*VGKVNR Trigger: TCTATTCACTTTACCAACCCAAGAGCAACCCAGTAT...CTGGAACTGGAATTGTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR TCA 90 bp | AACCTGAGTTCAATTATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACTGTACATGTATAGTATaGAGAGGAGCAAGTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: NLSSIICPELTWQLTTVYCTCIV*RGASFP Trigger: TGGGAAACTTGCTCCTCTTCATACTATACATGTACA...GTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATAATTGAACTCAGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR GCA 90 bp | AAGGGCACTGGTTGTTCTCCCATAGAACCTGAGTTCAATTATATGCCCAGAACTCTTGGATTTAAGCCATaGCCACTTGGAATGTTTAGA | + |
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Preference number: 4 (lower is better) Translates to: KGTGCSPIEPEFNYMPRTLGFKP*PLGMFR Trigger: TCTAAACATTCCAAGTGGGCATGGCTTAAATCCAAG...AGTTCTGGGCATATAATTGAACTCAGGTTCTATGGGAGAACAACCAGTGCCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR GCA 90 bp | AAGGGCACTGGTTGTTCTCCCATAGAACCTGAGTTCAATTATATGCCCAGAACTTCTCTTTTCAGAAGATaGATGGAGAGAGACACTGAA | + |
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Preference number: 4 (lower is better) Translates to: KGTGCSPIEPEFNYMPRTSLFRR*MERDTE Trigger: TTCAGTGTCTCTCTCCATGCATCTTCTGAAAAGAGA...AGTTCTGGGCATATAATTGAACTCAGGTTCTATGGGAGAACAACCAGTGCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CCA 90 bp | TATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACAATTCCAGTTCCAGTTACATACAACATCATaGAAAAGGATCCTGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: YMPRTHMAAHNCLQFQFQLHTTS*KRILTA Trigger: TGCAGTCAGGATCCTTTTCCATGATGTTGTATGTAA...CTGGAACTGGAATTGTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CCA 90 bp | AAGGGCACTGGTTGTTCTCCCATAGAACCTGAGTTCAATTATATGCCCAGAACTATACTGGGTTGCTCTTaGGTTGGTAAAGTGAATAGA | + |
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Preference number: 4 (lower is better) Translates to: KGTGCSPIEPEFNYMPRTILGCS*VGKVNR Trigger: TCTATTCACTTTACCAACCCAAGAGCAACCCAGTAT...AGTTCTGGGCATATAATTGAACTCAGGTTCTATGGGAGAACAACCAGTGCCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR TCA 90 bp | CTACTACCTGGATATTATATACTCAGGCATGCTATGGCTATTTTGCTCATGTGGCAAGCATTAGATGTGTaGAGATCATATCTACGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LLPGYYILRHAMAILLMWQALDV*RSYLRA Trigger: AGCCCGTAGATATGATCTTCACACATCTAATGCTTG...CCACATGAGCAAAATAGCCATAGCATGCCTGAGTATATAATATCCAGGTAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR GCA 90 bp | TATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACAATTCCAGTTCCAGGTATGCATACAAAACTaGCTTACATACAACATCATG | + |
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Preference number: 4 (lower is better) Translates to: YMPRTHMAAHNCLQFQFQVCIQN*LTYNIM Trigger: CATGATGTTGTATGTAAGGCAGTTTTGTATGCATAC...CTGGAACTGGAATTGTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR GCA 90 bp | AACCTGAGTTCAATTATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACCCTAGTAACACTGTATaGATACAAAACTGCCTTACA | + |
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Preference number: 4 (lower is better) Translates to: NLSSIICPELTWQLTTVYPSNTV*IQNCLT Trigger: TGTAAGGCAGTTTTGTATGCATACAGTGTTACTAGG...GTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATAATTGAACTCAGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CCA 90 bp | AAGGGCACTGGTTGTTCTCCCATAGAACCTGAGTTCAATTATATGCCCAGAACTTTACATACAACATCATaGAAAAGGATCCTGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: KGTGCSPIEPEFNYMPRTLHTTS*KRILTA Trigger: TGCAGTCAGGATCCTTTTCCATGATGTTGTATGTAA...AGTTCTGGGCATATAATTGAACTCAGGTTCTATGGGAGAACAACCAGTGCCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR GCA 90 bp | AAGGGCACTGGTTGTTCTCCCATAGAACCTGAGTTCAATTATATGCCCAGAACTGTATGCATACAAAACTaGCTTACATACAACATCATG | + |
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Preference number: 4 (lower is better) Translates to: KGTGCSPIEPEFNYMPRTVCIQN*LTYNIM Trigger: CATGATGTTGTATGTAAGGCAGTTTTGTATGCATAC...AGTTCTGGGCATATAATTGAACTCAGGTTCTATGGGAGAACAACCAGTGCCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR GCA 90 bp | CTACTACCTGGATATTATATACTCAGGCATGCTATGGCTATTTTGCTCATGTGGCTTGGATTTAAGCCATaGCCACTTGGAATGTTTAGA | + |
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Preference number: 4 (lower is better) Translates to: LLPGYYILRHAMAILLMWLGFKP*PLGMFR Trigger: TCTAAACATTCCAAGTGGGCATGGCTTAAATCCAAG...CCACATGAGCAAAATAGCCATAGCATGCCTGAGTATATAATATCCAGGTAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR GCA 90 bp | CTACTACCTGGATATTATATACTCAGGCATGCTATGGCTATTTTGCTCATGTGGTCTCTTTTCAGAAGATaGATGGAGAGAGACACTGAA | + |
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Preference number: 4 (lower is better) Translates to: LLPGYYILRHAMAILLMWSLFRR*MERDTE Trigger: TTCAGTGTCTCTCTCCATGCATCTTCTGAAAAGAGA...CCACATGAGCAAAATAGCCATAGCATGCCTGAGTATATAATATCCAGGTAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CCA 90 bp | CTACTACCTGGATATTATATACTCAGGCATGCTATGGCTATTTTGCTCATGTGGATACTGGGTTGCTCTTaGGTTGGTAAAGTGAATAGA | + |
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Preference number: 4 (lower is better) Translates to: LLPGYYILRHAMAILLMWILGCS*VGKVNR Trigger: TCTATTCACTTTACCAACCCAAGAGCAACCCAGTAT...CCACATGAGCAAAATAGCCATAGCATGCCTGAGTATATAATATCCAGGTAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS GCA 90 bp | AGCCACAAGCAGAAGGATGCTGTGGGTGGCTCTCTTTTCAGAAGATaGATGGAGAGAGACACTGAAACTGTGGACATGCCGTGTACTCCT | + |
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Preference number: 5 (lower is better) Translates to: SHKQKDAVGGSLFRR*MERDTETVDMPCTP Trigger: AGGAGTACACGGCATGTCCACAGTTTCAGTGTCTCTCTCCATGCATCTTCTGAAAAGAGAGCCACCCACAGCATCCTTCTGCTTGTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094827.2 ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS CCA 90 bp | GTGGCTCTCTTTTCAGAAGATGCATGGAGAGAGACACTGAAACTGTaGACATGCCGTGTACTCCTATTGTGTCTGAAGAGGAGGCTCACC | + |
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Preference number: 5 (lower is better) Translates to: VALFSEDAWRETLKL*TCRVLLLCLKRRLT Trigger: GGTGAGCCTCCTCTTCAGACACAATAGGAGTACACGGCATGTCCACAGTTTCAGTGTCTCTCTCCATGCATCTTCTGAAAAGAGAGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094827.2 ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CAA 90 bp | AAGGGCACTGGTTGTTCTCCCATAGAACCTGAGTTCAATTATATGCCCAGAACTGCAGTTACAAGTGACTaGGTGGTGTGGTGGCGAACC | + |
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Preference number: 5 (lower is better) Translates to: KGTGCSPIEPEFNYMPRTAVTSD*VVWWRT Trigger: GGTTCGCCACCACACCACCAAGTCACTTGTAACTGC...AGTTCTGGGCATATAATTGAACTCAGGTTCTATGGGAGAACAACCAGTGCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CAA 90 bp | CTACTACCTGGATATTATATACTCAGGCATGCTATGGCTATTTTGCTCATGTGGGCAGTTACAAGTGACTaGGTGGTGTGGTGGCGAACC | + |
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Preference number: 5 (lower is better) Translates to: LLPGYYILRHAMAILLMWAVTSD*VVWWRT Trigger: GGTTCGCCACCACACCACCAAGTCACTTGTAACTGC...CCACATGAGCAAAATAGCCATAGCATGCCTGAGTATATAATATCCAGGTAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CAA 90 bp | AACCTGAGTTCAATTATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACCATAAGGGCAGACAGTaGGGTAGCCTGATGATAAAA | + |
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Preference number: 5 (lower is better) Translates to: NLSSIICPELTWQLTTVYHKGRQ*GSLMIK Trigger: TTTTATCATCAGGCTACCCAACTGTCTGCCCTTATG...GTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATAATTGAACTCAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CAA 90 bp | AAGGGCACTGGTTGTTCTCCCATAGAACCTGAGTTCAATTATATGCCCAGAACTCATAAGGGCAGACAGTaGGGTAGCCTGATGATAAAA | + |
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Preference number: 5 (lower is better) Translates to: KGTGCSPIEPEFNYMPRTHKGRQ*GSLMIK Trigger: TTTTATCATCAGGCTACCCAACTGTCTGCCCTTATG...AGTTCTGGGCATATAATTGAACTCAGGTTCTATGGGAGAACAACCAGTGCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS TCA 90 bp | TTAAGCCATGCCCACTTGGAATGTTTAGAACTGAGAGTGATGGCTTaGAATACACTTAGTAGCAAGATAGTACAGAGGGAAAGGCCCCTA | + |
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Preference number: 5 (lower is better) Translates to: LSHAHLECLELRVMA*NTLSSKIVQRERPL Trigger: TAGGGGCCTTTCCCTCTGTACTATCTTGCTACTAAGTGTATTTCAAGCCATCACTCTCAGTTCTAAACATTCCAAGTGGGCATGGCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094827.2 ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS CCA 90 bp | ATTATTAGTGCAGTTACAAGTGACTTGGTGGTGTGGTGGCGAACCTaGCTACTTCGGCAGTATATCTGGGAATACTTTGAATCCACAAAA | + |
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Preference number: 5 (lower is better) Translates to: IISAVTSDLVVWWRT*LLRQYIWEYFESTK Trigger: TTTTGTGGATTCAAAGTATTCCCAGATATACTGCCGAAGTAGCCAGGTTCGCCACCACACCACCAAGTCACTTGTAACTGCACTAATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094827.2 ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CAA 90 bp | AAGGGCACTGGTTGTTCTCCCATAGAACCTGAGTTCAATTATATGCCCAGAACTACATCTGGCATCAGCTaGAACATGATGCTCAAAACA | + |
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Preference number: 5 (lower is better) Translates to: KGTGCSPIEPEFNYMPRTTSGIS*NMMLKT Trigger: TGTTTTGAGCATCATGTTCAAGCTGATGCCAGATGT...AGTTCTGGGCATATAATTGAACTCAGGTTCTATGGGAGAACAACCAGTGCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CAA 90 bp | AACCTGAGTTCAATTATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACACATCTGGCATCAGCTaGAACATGATGCTCAAAACA | + |
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Preference number: 5 (lower is better) Translates to: NLSSIICPELTWQLTTVYTSGIS*NMMLKT Trigger: TGTTTTGAGCATCATGTTCAAGCTGATGCCAGATGT...GTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATAATTGAACTCAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CAA 90 bp | CTACTACCTGGATATTATATACTCAGGCATGCTATGGCTATTTTGCTCATGTGGATGCATGACTCAAGCTaGGATTTAAGCCATGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: LLPGYYILRHAMAILLMWMHDSS*DLSHAH Trigger: GTGGGCATGGCTTAAATCCAAGCTTGAGTCATGCAT...CCACATGAGCAAAATAGCCATAGCATGCCTGAGTATATAATATCCAGGTAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CAA 90 bp | TATATGCCCAGAACTCACATGGCAGCTCACAACTGTCTACAATTCCAGTTCCAGATGATGCTCAAAACATaGACAAGCATTAGATGTGTG | + |
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Preference number: 5 (lower is better) Translates to: YMPRTHMAAHNCLQFQFQMMLKT*TSIRCV Trigger: CACACATCTAATGCTTGTCAATGTTTTGAGCATCAT...CTGGAACTGGAATTGTAGACAGTTGTGAGCTGCCATGTGAGTTCTGGGCATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CAA 90 bp | CTACTACCTGGATATTATATACTCAGGCATGCTATGGCTATTTTGCTCATGTGGCATAAGGGCAGACAGTaGGGTAGCCTGATGATAAAA | + |
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Preference number: 5 (lower is better) Translates to: LLPGYYILRHAMAILLMWHKGRQ*GSLMIK Trigger: TTTTATCATCAGGCTACCCAACTGTCTGCCCTTATG...CCACATGAGCAAAATAGCCATAGCATGCCTGAGTATATAATATCCAGGTAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS-3UTR CAA 90 bp | CTACTACCTGGATATTATATACTCAGGCATGCTATGGCTATTTTGCTCATGTGGATGATGCTCAAAACATaGACAAGCATTAGATGTGTG | + |
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Preference number: 5 (lower is better) Translates to: LLPGYYILRHAMAILLMWMMLKT*TSIRCV Trigger: CACACATCTAATGCTTGTCAATGTTTTGAGCATCAT...CCACATGAGCAAAATAGCCATAGCATGCCTGAGTATATAATATCCAGGTAGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS CCA 72 bp | GCAGTTACAAGTGACTTGGTGGTGTGGTGGCGAACCTaGCTACTTCGGCAGTATATCTGGGAATACTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: AVTSDLVVWWRT*LLRQYIWEYFE Trigger: TTCAAAGTATTCCCAGATATACTGCCGAAGTAGCCAGGTTCGCCACCACACCACCAAGTCACTTGTAACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094827.2 ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS CCA 72 bp | GTGTGGTGGCGAACCTGGCTACTTCGGCAGTATATCTaGGAATACTTTGAATCCACAAAAGTGAAGTTGATT | + |
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Preference number: 6 (lower is better) Translates to: VWWRTWLLRQYI*EYFESTKVKLI Trigger: AATCAACTTCACTTTTGTGGATTCAAAGTATTCCCAGATATACTGCCGAAGTAGCCAGGTTCGCCACCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094827.2 ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS CCA 72 bp | GAAAAGGATCCTGACTGCAAAGGATCTCATGACATCTaGCATCAGCTTGAACATGATGCTCAAAACATTGAC | + |
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Preference number: 6 (lower is better) Translates to: EKDPDCKGSHDI*HQLEHDAQNID Trigger: GTCAATGTTTTGAGCATCATGTTCAAGCTGATGCCAGATGTCATGAGATCCTTTGCAGTCAGGATCCTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094827.2 ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS GCA 72 bp | GATAGTACAGAGGGAAAGGCCCCTAGTAACACTGTATaGATACAAAACTGCCTTACATACAACATCATGGAA | + |
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Preference number: 6 (lower is better) Translates to: DSTEGKAPSNTV*IQNCLTYNIME Trigger: TTCCATGATGTTGTATGTAAGGCAGTTTTGTATGCATACAGTGTTACTAGGGGCCTTTCCCTCTGTACTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094827.2 ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS CAA 90 bp | ATGATCCACATGATGAGGAATAAGGGAAAAATGCATGACTCAAGCTaGGATTTAAGCCATGCCCACTTGGAATGTTTAGAACTGAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: MIHMMRNKGKMHDSS*DLSHAHLECLELRV Trigger: CACTCTCAGTTCTAAACATTCCAAGTGGGCATGGCTTAAATCCAAGCTTGAGTCATGCATTTTTCCCTTATTCCTCATCATGTGGATCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094827.2 ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS CAA 72 bp | ACATCTGGCATCAGCTTGAACATGATGCTCAAAACATaGACAAGCATTAGATGTGTGAAGATCATATCTACG | + |
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Preference number: 6 (lower is better) Translates to: TSGISLNMMLKT*TSIRCVKIIST Trigger: CGTAGATATGATCTTCACACATCTAATGCTTGTCAATGTTTTGAGCATCATGTTCAAGCTGATGCCAGATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094827.2 ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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| CDS CAA 72 bp | ATGATGAGGAATAAGGGAAAAATGCATGACTCAAGCTaGGATTTAAGCCATGCCCACTTGGAATGTTTAGAA | + |
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Preference number: 6 (lower is better) Translates to: MMRNKGKMHDSS*DLSHAHLECLE Trigger: TTCTAAACATTCCAAGTGGGCATGGCTTAAATCCAAGCTTGAGTCATGCATTTTTCCCTTATTCCTCATCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094827.2 ENSMUST00000211249.3 ENSMUST00000227443.2 ENSMUST00000228800.2 |
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