Pregenerated sensors for VMN1R86 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070816Ensembl transcript IDs: ENSMUST00000094828.3, ENSMUST00000226604.2, ENSMUST00000227220.2, ENSMUST00000227700.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATTTCAAATGTTATCTCGAAAGTTCCCTATACCCTCCCCGCACCCTaGTCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGCATTCCC | + |
|
Preference number: 1 (lower is better) Translates to: ISNVISKVPYTLPAP*SPTHPLPLLGPGIP Trigger: GGGAATGCCAGGGCCAAGAAGTGGGAGTGGGTGGGTAGGGGAGCAGGGTGCGGGGAGGGTATAGGGAACTTTCGAGATAACATTTGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CCA 90 bp | GGTAGGCTACCTGTCATGGCATGGGTCTCAAGCTGGACCAGTCATTaGTGGGCCATGCCCTTATTTTCTGCTCCATCTTTACTCCTCCAC | + |
|
Preference number: 1 (lower is better) Translates to: GRLPVMAWVSSWTSH*WAMPLFSAPSLLLH Trigger: GTGGAGGAGTAAAGATGGAGCAGAAAATAAGGGCATGGCCCACCAATGACTGGTCCAGCTTGAGACCCATGCCATGACAGGTAGCCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR GCA 90 bp | GTAGGTGGGGTGGGAGAGTGTAAGGGCCTGAGTGGGAGTTGGGAATaGTGTAAATGTATTACAAGGATTTTCTTGGCAGACACTCTACTC | + |
|
Preference number: 1 (lower is better) Translates to: VGGVGECKGLSGSWE*CKCITRIFLADTLL Trigger: GAGTAGAGTGTCTGCCAAGAAAATCCTTGTAATACATTTACAGCATTCCCAACTCCCACTCAGGCCCTTACACTCTCCCACCCCACCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR GCA 90 bp | GGTCTCAAGCTGGACCAGTCATTGGTGGGCCATGCCCTTATTTTCTaGTCCATCTTTACTCCTCCACATCTTGTAAGCAGGGCAAATTGT | + |
|
Preference number: 1 (lower is better) Translates to: GLKLDQSLVGHALIF*SIFTPPHLVSRANC Trigger: ACAATTTGCCCTGCTTACAAGATGTGGAGGAGTAAAGATGGAGCAGAAAATAAGGGCATGGCCCACCAATGACTGGTCCAGCTTGAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CCA 90 bp | GAAAGAGTAGGTGGGGTGGGAGAGTGTAAGGGCCTGAGTGGGAGTTaGGAATGCTGTAAATGTATTACAAGGATTTTCTTGGCAGACACT | + |
|
Preference number: 1 (lower is better) Translates to: ERVGGVGECKGLSGS*ECCKCITRIFLADT Trigger: AGTGTCTGCCAAGAAAATCCTTGTAATACATTTACAGCATTCCCAACTCCCACTCAGGCCCTTACACTCTCCCACCCCACCTACTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CCA 90 bp | ATGAGATGGCCAGTTCAGTTTATTATCCCCCATTGCCAGAAATCTTaGCTAGGGTCACCTGGGAGTTACCAATGCCCTAGGTTTGTAGCT | + |
|
Preference number: 1 (lower is better) Translates to: MRWPVQFIIPHCQKS*LGSPGSYQCPRFVA Trigger: AGCTACAAACCTAGGGCATTGGTAACTCCCAGGTGACCCTAGCCAAGATTTCTGGCAATGGGGGATAATAAACTGAACTGGCCATCTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR TCA 90 bp | GGGTTGATATCGCAATCCCTCCATTGGAAGTCTTGCCAGGTTACATaGGATGGCCAGTTCAGTTTATTATCCCCCATTGCCAGAAATCTT | + |
|
Preference number: 1 (lower is better) Translates to: GLISQSLHWKSCQVT*DGQFSLLSPIARNL Trigger: AAGATTTCTGGCAATGGGGGATAATAAACTGAACTGGCCATCTCATGTAACCTGGCAAGACTTCCAATGGAGGGATTGCGATATCAACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR GCA 90 bp | TTGTGGAGAGCCCTGCTCCAATATCTACAACTACATCACAGCTCCTaGATCTATGCTTTAGGGAACATTGCAGAAGAGGGGGTAAAAACT | + |
|
Preference number: 1 (lower is better) Translates to: LWRALLQYLQLHHSS*IYALGNIAEEGVKT Trigger: AGTTTTTACCCCCTCTTCTGCAATGTTCCCTAAAGCATAGATGCAGGAGCTGTGATGTAGTTGTAGATATTGGAGCAGGGCTCTCCACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CCA 90 bp | GATATCGCAATCCCTCCATTGGAAGTCTTGCCAGGTTACATGAGATaGCCAGTTCAGTTTATTATCCCCCATTGCCAGAAATCTTGGCTA | + |
|
Preference number: 1 (lower is better) Translates to: DIAIPPLEVLPGYMR*PVQFIIPHCQKSWL Trigger: TAGCCAAGATTTCTGGCAATGGGGGATAATAAACTGAACTGGCCATCTCATGTAACCTGGCAAGACTTCCAATGGAGGGATTGCGATATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CCA 90 bp | TTTGAGGGAGGGTTGTTGGTAGGGTCTATAGGAAGGAAAAGGAGGTaGGAATATGATGTAATCCTATTGATGGCACATGCTTTTAACCCA | + |
|
Preference number: 1 (lower is better) Translates to: FEGGLLVGSIGRKRR*EYDVILLMAHAFNP Trigger: TGGGTTAAAAGCATGTGCCATCAATAGGATTACATCATATTCCCACCTCCTTTTCCTTCCTATAGACCCTACCAACAACCCTCCCTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR TCA 90 bp | AAGACCTCACCCCCAGATTTTGAGTTACAAGTAATCAATGGCTGTTaGGAGAAGAGGAAGCAGTATAAAGCCCTTGATAGTTTATTCAAT | + |
|
Preference number: 1 (lower is better) Translates to: KTSPPDFELQVINGC*EKRKQYKALDSLFN Trigger: ATTGAATAAACTATCAAGGGCTTTATACTGCTTCCTCTTCTCTCAACAGCCATTGATTACTTGTAACTCAAAATCTGGGGGTGAGGTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR GCA 90 bp | GGAGAATTAGCATCTTCCATGGATGAACTCTTTTTGGTTGTCCCATaGAGAGTTGTCATTATACATGCAAACAACAGAAACAAATTCAGC | + |
|
Preference number: 1 (lower is better) Translates to: GELASSMDELFLVVP*RVVIIHANNRNKFS Trigger: GCTGAATTTGTTTCTGTTGTTTGCATGTATAATGACAACTCTGCATGGGACAACCAAAAAGAGTTCATCCATGGAAGATGCTAATTCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CCA 90 bp | GAGCATACCAAGTGCTTCAACTCCAATTGTCTATTCAATACCAAATaGCCAGCTCTGATTACACACATATATGCAAGTCACATTATAGAG | + |
|
Preference number: 1 (lower is better) Translates to: EHTKCFNSNCLFNTK*PALITHIYASHIIE Trigger: CTCTATAATGTGACTTGCATATATGTGTGTAATCAGAGCTGGCCATTTGGTATTGAATAGACAATTGGAGTTGAAGCACTTGGTATGCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR TCA 90 bp | AGGCTACTGGAGAGATCTACAACTTTTCAAAATGCATTGAGTAATTaGCCTTTGGGTACCCATTATAGATTGATACATCTACAACACAAT | + |
|
Preference number: 1 (lower is better) Translates to: RLLERSTTFQNALSN*PLGTHYRLIHLQHN Trigger: ATTGTGTTGTAGATGTATCAATCTATAATGGGTACCCAAAGGTCAATTACTCAATGCATTTTGAAAAGTTGTAGATCTCTCCAGTAGCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CAA 90 bp | CTCCACTTCAGTTGTCTTTCCCAGTACTCTCTCCCTCCTCCTCCCTaGCCTAATCCATCCGGTTCCCATCCCCAACTCCACTCCCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LHFSCLSQYSLPPPP*PNPSGSHPQLHSLS Trigger: GGACAGGGAGTGGAGTTGGGGATGGGAACCGGATGGATTAGGCAAGGGAGGAGGAGGGAGAGAGTACTGGGAAAGACAACTGAAGTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGGTGAGCATACCCAGAAAGACAAGTGCATATTCCTTTTCATCTTTGGTTCCTGCCTGGTCTACAGAGTaGGTTTCAGGACACCCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: WVSIPRKTSAYSFSSLVPAWSTE*VSGHPK Trigger: CTTTGGGTGTCCTGAAACTCACTCTGTAGACCAGGC...AGGAACCAAAGATGAAAAGGAATATGCACTTGTCTTTCTGGGTATGCTCACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTACAACTACATCACAGCTCCTGCATCTATGCTTTAGGGAACATTGCAGAAGAGTAACATGGGGGTGGTaGTTCTCAAGGGGTATGCTC | + |
|
Preference number: 2 (lower is better) Translates to: STTTSQLLHLCFREHCRRVTWGW*FSRGML Trigger: GAGCATACCCCTTGAGAATCACCACCCCCATGTTAC...TCTTCTGCAATGTTCCCTAAAGCATAGATGCAGGAGCTGTGATGTAGTTGTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTACAACTACATCACAGCTCCTGCATCTATGCTTTAGGGAACATTGCAGAAGAGCAGATAGATCTCTGTaGGTTCAAGGCAAGCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: STTTSQLLHLCFREHCRRADRSL*VQGKPG Trigger: ACCAGGCTTGCCTTGAACTCACAGAGATCTATCTGC...TCTTCTGCAATGTTCCCTAAAGCATAGATGCAGGAGCTGTGATGTAGTTGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTGAGCATACCCAGAAAGACAAGTGCATATTCCTTTTCATCTTTGGTTCCTATTAACAGCAAGGTCTaGAGGGAGGAAGAGGAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: WVSIPRKTSAYSFSSLVPINSKV*REEEEG Trigger: CCCTTCCTCTTCCTCCCTCCAGACCTTGCTGTTAAT...AGGAACCAAAGATGAAAAGGAATATGCACTTGTCTTTCTGGGTATGCTCACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTACAACTACATCACAGCTCCTGCATCTATGCTTTAGGGAACATTGCAGAAGAATTAACAGCAAGGTCTaGAGGGAGGAAGAGGAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: STTTSQLLHLCFREHCRRINSKV*REEEEG Trigger: CCCTTCCTCTTCCTCCCTCCAGACCTTGCTGTTAAT...TCTTCTGCAATGTTCCCTAAAGCATAGATGCAGGAGCTGTGATGTAGTTGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR TCA 90 bp | TTATCAAAGAAGATCATTTTGCAGCAGACAGAGGCTACTGGAGAGATCTACAACGCAGATAGATCTCTGTaGGTTCAAGGCAAGCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LSKKIILQQTEATGEIYNADRSL*VQGKPG Trigger: ACCAGGCTTGCCTTGAACTCACAGAGATCTATCTGC...GTTGTAGATCTCTCCAGTAGCCTCTGTCTGCTGCAAAATGATCTTCTTTGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCCTTCCTAGAGCTTTAGGTGCAGGATTTATTTTGTTGGTACATCTGTTGGGAACTCAAAGTCAGCGATaGTACAAGGACATCCATTGG | + |
|
Preference number: 2 (lower is better) Translates to: PLPRALGAGFILLVHLLGTQSQR*YKDIHW Trigger: CCAATGGATGTCCTTGTACCATCGCTGACTTTGAGT...TCCCAACAGATGTACCAACAAAATAAATCCTGCACCTAAAGCTCTAGGAAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CCA 90 bp | TTATCAAAGAAGATCATTTTGCAGCAGACAGAGGCTACTGGAGAGATCTACAACATTAACAGCAAGGTCTaGAGGGAGGAAGAGGAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LSKKIILQQTEATGEIYNINSKV*REEEEG Trigger: CCCTTCCTCTTCCTCCCTCCAGACCTTGCTGTTAAT...GTTGTAGATCTCTCCAGTAGCCTCTGTCTGCTGCAAAATGATCTTCTTTGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCCTTCCTAGAGCTTTAGGTGCAGGATTTATTTTGTTGGTACATCTGTTGGGACCAAATGGCCAGCTCTaGTTACACACATATATGCAA | + |
|
Preference number: 2 (lower is better) Translates to: PLPRALGAGFILLVHLLGPNGQL*LHTYMQ Trigger: TTGCATATATGTGTGTAATCAGAGCTGGCCATTTGG...TCCCAACAGATGTACCAACAAAATAAATCCTGCACCTAAAGCTCTAGGAAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTACAACTACATCACAGCTCCTGCATCTATGCTTTAGGGAACATTGCAGAAGATTTAACCCAGCAATGTaGAAGGAAGAGGCAGATAGA | + |
|
Preference number: 2 (lower is better) Translates to: STTTSQLLHLCFREHCRRFNPAM*KEEADR Trigger: TCTATCTGCCTCTTCCTTTCACATTGCTGGGTTAAA...TCTTCTGCAATGTTCCCTAAAGCATAGATGCAGGAGCTGTGATGTAGTTGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGGTGAGCATACCCAGAAAGACAAGTGCATATTCCTTTTCATCTTTGGTTCCTACAGAAAGCCACAACTaGCACAGTGTAGAAATCAAC | + |
|
Preference number: 2 (lower is better) Translates to: WVSIPRKTSAYSFSSLVPTESHN*HSVEIN Trigger: GTTGATTTCTACACTGTGTCAGTTGTGGCTTTCTGT...AGGAACCAAAGATGAAAAGGAATATGCACTTGTCTTTCTGGGTATGCTCACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCCTTCCTAGAGCTTTAGGTGCAGGATTTATTTTGTTGGTACATCTGTTGGGATGGGATTCACTATTTTaGATTTTGGTTGGTCGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: PLPRALGAGFILLVHLLGWDSLF*ILVGRG Trigger: ACCACGACCAACCAAAATGCAAAATAGTGAATCCCA...TCCCAACAGATGTACCAACAAAATAAATCCTGCACCTAAAGCTCTAGGAAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CCA 90 bp | TTATCAAAGAAGATCATTTTGCAGCAGACAGAGGCTACTGGAGAGATCTACAACACTCAAAGTCAGCGATaGTACAAGGACATCCATTGG | + |
|
Preference number: 2 (lower is better) Translates to: LSKKIILQQTEATGEIYNTQSQR*YKDIHW Trigger: CCAATGGATGTCCTTGTACCATCGCTGACTTTGAGT...GTTGTAGATCTCTCCAGTAGCCTCTGTCTGCTGCAAAATGATCTTCTTTGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CCA 90 bp | TTATCAAAGAAGATCATTTTGCAGCAGACAGAGGCTACTGGAGAGATCTACAACTCTCAGAGACCACTTTaGAAGAGGGGTCTGATAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LSKKIILQQTEATGEIYNSQRPL*KRGLID Trigger: ATCTATCAGACCCCTCTTCCAAAGTGGTCTCTGAGA...GTTGTAGATCTCTCCAGTAGCCTCTGTCTGCTGCAAAATGATCTTCTTTGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CAA 90 bp | CTGAGTGGGAGTTGGGAATGCTGTAAATGTATTACAAGGATTTTCTaGGCAGACACTCTACTCCAATTCAAGTGTGAATACCTGAAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LSGSWECCKCITRIF*ADTLLQFKCEYLKL Trigger: CAACTTCAGGTATTCACACTTGAATTGGAGTAGAGTGTCTGCCAAGAAAATCCTTGTAATACATTTACAGCATTCCCAACTCCCACTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR TCA 90 bp | TTATCAAAGAAGATCATTTTGCAGCAGACAGAGGCTACTGGAGAGATCTACAACCCAAATGGCCAGCTCTaGTTACACACATATATGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LSKKIILQQTEATGEIYNPNGQL*LHTYMQ Trigger: TTGCATATATGTGTGTAATCAGAGCTGGCCATTTGG...GTTGTAGATCTCTCCAGTAGCCTCTGTCTGCTGCAAAATGATCTTCTTTGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGGTGAGCATACCCAGAAAGACAAGTGCATATTCCTTTTCATCTTTGGTTCCTCATTACCAGATCAATTaGACAGCAAATTCTCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: WVSIPRKTSAYSFSSLVPHYQIN*TANSQV Trigger: GACCTGAGAATTTGCTGTGCAATTGATCTGGTAATG...AGGAACCAAAGATGAAAAGGAATATGCACTTGTCTTTCTGGGTATGCTCACCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTGAGCATACCCAGAAAGACAAGTGCATATTCCTTTTCATCTTTGGTTCCTTGTTGGTACATCTGTTaGGACTGGGATTCACTATTT | + |
|
Preference number: 2 (lower is better) Translates to: WVSIPRKTSAYSFSSLVPCWYIC*DWDSLF Trigger: AAATAGTGAATCCCAGTCCCAACAGATGTACCAACA...AGGAACCAAAGATGAAAAGGAATATGCACTTGTCTTTCTGGGTATGCTCACCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTACAACTACATCACAGCTCCTGCATCTATGCTTTAGGGAACATTGCAGAAGATGTTGGTACATCTGTTaGGACTGGGATTCACTATTT | + |
|
Preference number: 2 (lower is better) Translates to: STTTSQLLHLCFREHCRRCWYIC*DWDSLF Trigger: AAATAGTGAATCCCAGTCCCAACAGATGTACCAACA...TCTTCTGCAATGTTCCCTAAAGCATAGATGCAGGAGCTGTGATGTAGTTGTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTGAGCATACCCAGAAAGACAAGTGCATATTCCTTTTCATCTTTGGTTCCTCAGGATTTATTTTGTTaGTACATCTGTTGGGACTGG | + |
|
Preference number: 2 (lower is better) Translates to: WVSIPRKTSAYSFSSLVPQDLFC*YICWDW Trigger: CCAGTCCCAACAGATGTACCAACAAAATAAATCCTG...AGGAACCAAAGATGAAAAGGAATATGCACTTGTCTTTCTGGGTATGCTCACCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTACAACTACATCACAGCTCCTGCATCTATGCTTTAGGGAACATTGCAGAAGAGGAAGGAAAAGGAGGTaGGAATATGATGTAATCCTA | + |
|
Preference number: 2 (lower is better) Translates to: STTTSQLLHLCFREHCRRGRKRR*EYDVIL Trigger: TAGGATTACATCATATTCCCACCTCCTTTTCCTTCC...TCTTCTGCAATGTTCCCTAAAGCATAGATGCAGGAGCTGTGATGTAGTTGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGATGAACACAATGACAATAGCAATGGACACAGTAACATGGGGGTGGTGATTTACAAGGACATCCATTaGATAATTACCAGTTGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: QDEHNDNSNGHSNMGVVIYKDIH*IITSCS Trigger: GGAACAACTGGTAATTATCCAATGGATGTCCTTGTA...AATCACCACCCCCATGTTACTGTGTCCATTGCTATTGTCATTGTGTTCATCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTGAGCATACCCAGAAAGACAAGTGCATATTCCTTTTCATCTTTGGTTCCTTACAAGGACATCCATTaGATAATTACCAGTTGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: WVSIPRKTSAYSFSSLVPYKDIH*IITSCS Trigger: GGAACAACTGGTAATTATCCAATGGATGTCCTTGTA...AGGAACCAAAGATGAAAAGGAATATGCACTTGTCTTTCTGGGTATGCTCACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTACAACTACATCACAGCTCCTGCATCTATGCTTTAGGGAACATTGCAGAAGATACAAGGACATCCATTaGATAATTACCAGTTGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: STTTSQLLHLCFREHCRRYKDIH*IITSCS Trigger: GGAACAACTGGTAATTATCCAATGGATGTCCTTGTA...TCTTCTGCAATGTTCCCTAAAGCATAGATGCAGGAGCTGTGATGTAGTTGTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTGAGCATACCCAGAAAGACAAGTGCATATTCCTTTTCATCTTTGGTTCCTTACATCTGTTGGGACTaGGATTCACTATTTTGCATT | + |
|
Preference number: 2 (lower is better) Translates to: WVSIPRKTSAYSFSSLVPYICWD*DSLFCI Trigger: AATGCAAAATAGTGAATCCCAGTCCCAACAGATGTA...AGGAACCAAAGATGAAAAGGAATATGCACTTGTCTTTCTGGGTATGCTCACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CCA 90 bp | TTATCAAAGAAGATCATTTTGCAGCAGACAGAGGCTACTGGAGAGATCTACAACTGTTGGTACATCTGTTaGGACTGGGATTCACTATTT | + |
|
Preference number: 2 (lower is better) Translates to: LSKKIILQQTEATGEIYNCWYIC*DWDSLF Trigger: AAATAGTGAATCCCAGTCCCAACAGATGTACCAACA...GTTGTAGATCTCTCCAGTAGCCTCTGTCTGCTGCAAAATGATCTTCTTTGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CAA 90 bp | AATAGTTTTCCCCAGGAAAGAGCATACCAAGTGCTTCAACTCCAATaGTCTATTCAATACCAAATGGCCAGCTCTGATTACACACATATA | + |
|
Preference number: 2 (lower is better) Translates to: NSFPQERAYQVLQLQ*SIQYQMASSDYTHI Trigger: TATATGTGTGTAATCAGAGCTGGCCATTTGGTATTGAATAGACAATTGGAGTTGAAGCACTTGGTATGCTCTTTCCTGGGGAAAACTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CAA 90 bp | AATCTTTCTCTTCCCCTTCCTAGAGCTTTAGGTGCAGGATTTATTTaGTTGGTACATCTGTTGGGACTGGGATTCACTATTTTGCATTTT | + |
|
Preference number: 2 (lower is better) Translates to: NLSLPLPRALGAGFI*LVHLLGLGFTILHF Trigger: AAAATGCAAAATAGTGAATCCCAGTCCCAACAGATGTACCAACAAAATAAATCCTGCACCTAAAGCTCTAGGAAGGGGAAGAGAAAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CAA 90 bp | TTGCTTGAAGAAGGAGAATTAGCATCTTCCATGGATGAACTCTTTTaGGTTGTCCCATGCAGAGTTGTCATTATACATGCAAACAACAGA | + |
|
Preference number: 2 (lower is better) Translates to: LLEEGELASSMDELF*VVPCRVVIIHANNR Trigger: TCTGTTGTTTGCATGTATAATGACAACTCTGCATGGGACAACCAAAAAGAGTTCATCCATGGAAGATGCTAATTCTCCTTCTTCAAGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR TCA 90 bp | TTATCAAAGAAGATCATTTTGCAGCAGACAGAGGCTACTGGAGAGATCTACAACTTACAAATATATGGGTaGGCATACCCAGAAAGACAA | + |
|
Preference number: 2 (lower is better) Translates to: LSKKIILQQTEATGEIYNLQIYG*AYPERQ Trigger: TTGTCTTTCTGGGTATGCTCACCCATATATTTGTAA...GTTGTAGATCTCTCCAGTAGCCTCTGTCTGCTGCAAAATGATCTTCTTTGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTACAACTACATCACAGCTCCTGCATCTATGCTTTAGGGAACATTGCAGAAGATTTTTGGTTGTCCCATaGAGAGTTGTCATTATACAT | + |
|
Preference number: 2 (lower is better) Translates to: STTTSQLLHLCFREHCRRFLVVP*RVVIIH Trigger: ATGTATAATGACAACTCTGCATGGGACAACCAAAAA...TCTTCTGCAATGTTCCCTAAAGCATAGATGCAGGAGCTGTGATGTAGTTGTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CCA 90 bp | TTATCAAAGAAGATCATTTTGCAGCAGACAGAGGCTACTGGAGAGATCTACAACTACATCTGTTGGGACTaGGATTCACTATTTTGCATT | + |
|
Preference number: 2 (lower is better) Translates to: LSKKIILQQTEATGEIYNYICWD*DSLFCI Trigger: AATGCAAAATAGTGAATCCCAGTCCCAACAGATGTA...GTTGTAGATCTCTCCAGTAGCCTCTGTCTGCTGCAAAATGATCTTCTTTGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CAA 90 bp | TTTGCATTTTGGTTGGTCGTGGTTTTTCATAATTGTTTCCATCTATaGCAAAGAGAAGTATTCTTTATGCAGCATGGACCCTTAAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: FAFWLVVVFHNCFHL*QREVFFMQHGPLRR Trigger: CCTCCTTAAGGGTCCATGCTGCATAAAGAATACTTCTCTTTGCAATAGATGGAAACAATTATGAAAAACCACGACCAACCAAAATGCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR GCA 90 bp | TTATCAAAGAAGATCATTTTGCAGCAGACAGAGGCTACTGGAGAGATCTACAACTTTTTGGTTGTCCCATaGAGAGTTGTCATTATACAT | + |
|
Preference number: 2 (lower is better) Translates to: LSKKIILQQTEATGEIYNFLVVP*RVVIIH Trigger: ATGTATAATGACAACTCTGCATGGGACAACCAAAAA...GTTGTAGATCTCTCCAGTAGCCTCTGTCTGCTGCAAAATGATCTTCTTTGATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR GCA 90 bp | TTATCAAAGAAGATCATTTTGCAGCAGACAGAGGCTACTGGAGAGATCTACAACACCCAGAAAGACAAGTaGATATTCCTTTTCATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LSKKIILQQTEATGEIYNTQKDK*IFLFIF Trigger: AAAGATGAAAAGGAATATGCACTTGTCTTTCTGGGT...GTTGTAGATCTCTCCAGTAGCCTCTGTCTGCTGCAAAATGATCTTCTTTGATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR GCA 72 bp | CATGGGTCTCAAGCTGGACCAGTCATTGGTGGGCCATaGCCTTATTTTCTGCTCCATCTTTACTCCTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: HGSQAGPVIGGP*PYFLLHLYSST Trigger: TGTGGAGGAGTAAAGATGGAGCAGAAAATAAGGGCATGGCCCACCAATGACTGGTCCAGCTTGAGACCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CCA 72 bp | GTCATGGCATGGGTCTCAAGCTGGACCAGTCATTGGTaGGCCATGCCCTTATTTTCTGCTCCATCTTTACTC | + |
|
Preference number: 3 (lower is better) Translates to: VMAWVSSWTSHW*AMPLFSAPSLL Trigger: GAGTAAAGATGGAGCAGAAAATAAGGGCATGGCCCACCAATGACTGGTCCAGCTTGAGACCCATGCCATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CCA 72 bp | CCTGTCATGGCATGGGTCTCAAGCTGGACCAGTCATTaGTGGGCCATGCCCTTATTTTCTGCTCCATCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: PVMAWVSSWTSH*WAMPLFSAPSL Trigger: TAAAGATGGAGCAGAAAATAAGGGCATGGCCCACCAATGACTGGTCCAGCTTGAGACCCATGCCATGACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CCA 72 bp | ACCTGTATAATGCCAACACCAGTTGAAATGCTAACATaGTGGGGGCAGTCTGACAAGACCTCACCCCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: TCIMPTPVEMLT*WGQSDKTSPPD Trigger: ATCTGGGGGTGAGGTCTTGTCAGACTGCCCCCACCATGTTAGCATTTCAACTGGTGTTGGCATTATACAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CCA 72 bp | CCAGTTCAGTTTATTATCCCCCATTGCCAGAAATCTTaGCTAGGGTCACCTGGGAGTTACCAATGCCCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: PVQFIIPHCQKS*LGSPGSYQCPR Trigger: CCTAGGGCATTGGTAACTCCCAGGTGACCCTAGCCAAGATTTCTGGCAATGGGGGATAATAAACTGAACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR TCA 72 bp | TCGCAATCCCTCCATTGGAAGTCTTGCCAGGTTACATaGGATGGCCAGTTCAGTTTATTATCCCCCATTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SQSLHWKSCQVT*DGQFSLLSPIA Trigger: GGCAATGGGGGATAATAAACTGAACTGGCCATCTCATGTAACCTGGCAAGACTTCCAATGGAGGGATTGCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR GCA 72 bp | GCCCTGCTCCAATATCTACAACTACATCACAGCTCCTaGATCTATGCTTTAGGGAACATTGCAGAAGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ALLQYLQLHHSS*IYALGNIAEEG Trigger: CCCCTCTTCTGCAATGTTCCCTAAAGCATAGATGCAGGAGCTGTGATGTAGTTGTAGATATTGGAGCAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CCA 72 bp | GGTGGGGTGGGAGAGTGTAAGGGCCTGAGTGGGAGTTaGGAATGCTGTAAATGTATTACAAGGATTTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GGVGECKGLSGS*ECCKCITRIFL Trigger: CAAGAAAATCCTTGTAATACATTTACAGCATTCCCAACTCCCACTCAGGCCCTTACACTCTCCCACCCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR GCA 72 bp | TACATGAGATGGCCAGTTCAGTTTATTATCCCCCATTaGCAGAAATCTTGGCTAGGGTCACCTGGGAGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: YMRWPVQFIIPH*QKSWLGSPGSY Trigger: GTAACTCCCAGGTGACCCTAGCCAAGATTTCTGGCAATGGGGGATAATAAACTGAACTGGCCATCTCATGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CCA 72 bp | ATCCCTCCATTGGAAGTCTTGCCAGGTTACATGAGATaGCCAGTTCAGTTTATTATCCCCCATTGCCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: IPPLEVLPGYMR*PVQFIIPHCQK Trigger: TTTCTGGCAATGGGGGATAATAAACTGAACTGGCCATCTCATGTAACCTGGCAAGACTTCCAATGGAGGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR GCA 72 bp | CTGTTACATATGTGCAGAGGGTCTAGTTCAGTCCCATaGATATTTTCTTGTTGGTGGTTCAGTCTCTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLHMCRGSSSVP*IFSCWWFSLCE Trigger: CTCACAGAGACTGAACCACCAACAAGAAAATATGCATGGGACTGAACTAGACCCTCTGCACATATGTAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGTGAGCATACCCAGAAAGACAAGTGCATATTCCTTTTCATCTTTGGTTCCTCTGGGATTCACTATTTaGCATTTTGGTTGGTCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: WVSIPRKTSAYSFSSLVPLGFTI*HFGWSW Trigger: CCACGACCAACCAAAATGCAAAATAGTGAATCCCAG...AGGAACCAAAGATGAAAAGGAATATGCACTTGTCTTTCTGGGTATGCTCACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTTCCTAGAGCTTTAGGTGCAGGATTTATTTTGTTGGTACATCTGTTGGGATTGGATAATTACCAGTaGTTCCAGATAAGAGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PLPRALGAGFILLVHLLGLDNYQ*FQIRVP Trigger: TGGGACTCTTATCTGGAACAACTGGTAATTATCCAA...TCCCAACAGATGTACCAACAAAATAAATCCTGCACCTAAAGCTCTAGGAAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAGATGAACACAATGACAATAGCAATGGACACAGTAACATGGGGGTGGTGATTGCAGGATTTATTTTGTaGGTACATCTGTTGGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: QDEHNDNSNGHSNMGVVIAGFIL*VHLLGL Trigger: CAGTCCCAACAGATGTACCAACAAAATAAATCCTGC...AATCACCACCCCCATGTTACTGTGTCCATTGCTATTGTCATTGTGTTCATCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTACAACTACATCACAGCTCCTGCATCTATGCTTTAGGGAACATTGCAGAAGAGCAGGATTTATTTTGTaGGTACATCTGTTGGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: STTTSQLLHLCFREHCRRAGFIL*VHLLGL Trigger: CAGTCCCAACAGATGTACCAACAAAATAAATCCTGC...TCTTCTGCAATGTTCCCTAAAGCATAGATGCAGGAGCTGTGATGTAGTTGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGTGAGCATACCCAGAAAGACAAGTGCATATTCCTTTTCATCTTTGGTTCCTGGTGCAGGATTTATTTaGTTGGTACATCTGTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: WVSIPRKTSAYSFSSLVPGAGFI*LVHLLG Trigger: TCCCAACAGATGTACCAACAAAATAAATCCTGCACC...AGGAACCAAAGATGAAAAGGAATATGCACTTGTCTTTCTGGGTATGCTCACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR TCA 72 bp | GATTTTCTTGGCAGACACTCTACTCCAATTCAAGTGTaGATACCTGAAGTTGTGTTTAGTTGCCAGTGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: DFLGRHSTPIQV*IPEVVFSCQWL Trigger: CAACCACTGGCAACTAAACACAACTTCAGGTATTCACACTTGAATTGGAGTAGAGTGTCTGCCAAGAAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR TCA 72 bp | CCCCCAGATTTTGAGTTACAAGTAATCAATGGCTGTTaGGAGAAGAGGAAGCAGTATAAAGCCCTTGATAGT | + |
|
Preference number: 3 (lower is better) Translates to: PPDFELQVINGC*EKRKQYKALDS Trigger: ACTATCAAGGGCTTTATACTGCTTCCTCTTCTCTCAACAGCCATTGATTACTTGTAACTCAAAATCTGGGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CCA 72 bp | CCATCTATTGCAAAGAGAAGTATTCTTTATGCAGCATaGACCCTTAAGGAGGCCTCAATCCTACACAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PSIAKRSILYAA*TLKEASILHKE Trigger: TTCTTTGTGTAGGATTGAGGCCTCCTTAAGGGTCCATGCTGCATAAAGAATACTTCTCTTTGCAATAGATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTACAACTACATCACAGCTCCTGCATCTATGCTTTAGGGAACATTGCAGAAGATTGGATAATTACCAGTaGTTCCAGATAAGAGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: STTTSQLLHLCFREHCRRLDNYQ*FQIRVP Trigger: TGGGACTCTTATCTGGAACAACTGGTAATTATCCAA...TCTTCTGCAATGTTCCCTAAAGCATAGATGCAGGAGCTGTGATGTAGTTGTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAGATGAACACAATGACAATAGCAATGGACACAGTAACATGGGGGTGGTGATTTTGGATAATTACCAGTaGTTCCAGATAAGAGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: QDEHNDNSNGHSNMGVVILDNYQ*FQIRVP Trigger: TGGGACTCTTATCTGGAACAACTGGTAATTATCCAA...AATCACCACCCCCATGTTACTGTGTCCATTGCTATTGTCATTGTGTTCATCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CAA 90 bp | TTATCAAAGAAGATCATTTTGCAGCAGACAGAGGCTACTGGAGAGATCTACAACGGTGCAGGATTTATTTaGTTGGTACATCTGTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LSKKIILQQTEATGEIYNGAGFI*LVHLLG Trigger: TCCCAACAGATGTACCAACAAAATAAATCCTGCACC...GTTGTAGATCTCTCCAGTAGCCTCTGTCTGCTGCAAAATGATCTTCTTTGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTACAACTACATCACAGCTCCTGCATCTATGCTTTAGGGAACATTGCAGAAGATTGTCCCATGCAGAGTaGTCATTATACATGCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: STTTSQLLHLCFREHCRRLSHAE*SLYMQT Trigger: TGTTTGCATGTATAATGACAACTCTGCATGGGACAA...TCTTCTGCAATGTTCCCTAAAGCATAGATGCAGGAGCTGTGATGTAGTTGTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CAA 90 bp | TTATCAAAGAAGATCATTTTGCAGCAGACAGAGGCTACTGGAGAGATCTACAACTGTGAATACCTGAAGTaGTGTTTAGTTGCCAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSKKIILQQTEATGEIYNCEYLK*CLVASG Trigger: ACCACTGGCAACTAAACACAACTTCAGGTATTCACA...GTTGTAGATCTCTCCAGTAGCCTCTGTCTGCTGCAAAATGATCTTCTTTGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CAA 90 bp | TTATCAAAGAAGATCATTTTGCAGCAGACAGAGGCTACTGGAGAGATCTACAACGTACAAGGACATCCATaGGATAATTACCAGTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LSKKIILQQTEATGEIYNVQGHP*DNYQLF Trigger: GAACAACTGGTAATTATCCAATGGATGTCCTTGTAC...GTTGTAGATCTCTCCAGTAGCCTCTGTCTGCTGCAAAATGATCTTCTTTGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAGAGCATACCAAGTGCTTCAACTCCAATTGTCTATTCAATACCAAATGGCGTACAAGGACATCCATaGGATAATTACCAGTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: GKSIPSASTPIVYSIPNGVQGHP*DNYQLF Trigger: GAACAACTGGTAATTATCCAATGGATGTCCTTGTAC...GCCATTTGGTATTGAATAGACAATTGGAGTTGAAGCACTTGGTATGCTCTTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR GCA 72 bp | AGTAAAACTCTCATGCCTTATCAAAGAAGATCATTTTaGAGCAGACAGAGGCTACTGGAGAGATCTACAACT | + |
|
Preference number: 3 (lower is better) Translates to: SKTLMPYQRRSF*SRQRLLERSTT Trigger: AGTTGTAGATCTCTCCAGTAGCCTCTGTCTGCTGCAAAATGATCTTCTTTGATAAGGCATGAGAGTTTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR-3UTR CAA 90 bp | TTATCAAAGAAGATCATTTTGCAGCAGACAGAGGCTACTGGAGAGATCTACAACTCACTATTTTGCATTTaGGTTGGTCGTGGTTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LSKKIILQQTEATGEIYNSLFCI*VGRGFS Trigger: TGAAAAACCACGACCAACCAAAATGCAAAATAGTGA...GTTGTAGATCTCTCCAGTAGCCTCTGTCTGCTGCAAAATGATCTTCTTTGATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR TCA 72 bp | ATAGCTATGTTGGAGATAATCTATTGGTGTAGCCTCTaGCATTACCAGATCAATTGCACAGCAAATTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: IAMLEIIYWCSL*HYQINCTANSQ Trigger: CTGAGAATTTGCTGTGCAATTGATCTGGTAATGTCAGAGGCTACACCAATAGATTATCTCCAACATAGCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CCA 72 bp | AAGTGCTTCAACTCCAATTGTCTATTCAATACCAAATaGCCAGCTCTGATTACACACATATATGCAAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: KCFNSNCLFNTK*PALITHIYASH Trigger: GTGACTTGCATATATGTGTGTAATCAGAGCTGGCCATTTGGTATTGAATAGACAATTGGAGTTGAAGCACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CCA 72 bp | GTTGGGAATGCTGTAAATGTATTACAAGGATTTTCTTaGCAGACACTCTACTCCAATTCAAGTGTGAATACC | + |
|
Preference number: 3 (lower is better) Translates to: VGNAVNVLQGFS*QTLYSNSSVNT Trigger: GGTATTCACACTTGAATTGGAGTAGAGTGTCTGCCAAGAAAATCCTTGTAATACATTTACAGCATTCCCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CCA 72 bp | CCCATCCATCTTTATGTATATTCTATTTACTTTTCCTaGGAAGATCCATATATACTCCTTCCCTCGAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PIHLYVYSIYFS*EDPYILLPSSL Trigger: AAGGCTCGAGGGAAGGAGTATATATGGATCTTCCCAGGAAAAGTAAATAGAATATACATAAAGATGGATGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR TCA 72 bp | GTTTCTTTTTCAAGGTCTGAATTACCTCACTCAGAATaGTCTTTTCTAGTTCCATCCATTTGCCTGCAAATT | + |
|
Preference number: 3 (lower is better) Translates to: VSFSRSELPHSE*SFLVPSICLQI Trigger: AATTTGCAGGCAAATGGATGGAACTAGAAAAGATCATTCTGAGTGAGGTAATTCAGACCTTGAAAAAGAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR GCA 72 bp | CTTTTTGGTTGTCCCATGCAGAGTTGTCATTATACATaGAAACAACAGAAACAAATTCAGCAGATTGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: LFGCPMQSCHYT*KQQKQIQQIVF Trigger: AAATACAATCTGCTGAATTTGTTTCTGTTGTTTGCATGTATAATGACAACTCTGCATGGGACAACCAAAAAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR GCA 90 bp | TGGGTGAGCATACCCAGAAAGACAAGTGCATATTCCTTTTCATCTTTGGTTCCTTGCTGTGAGTGGCTTTaGGCTCAGGAGATGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WVSIPRKTSAYSFSSLVPCCEWL*AQEMAG Trigger: CCCAGCCATCTCCTGAGCGCAAAGCCACTCACAGCA...AGGAACCAAAGATGAAAAGGAATATGCACTTGTCTTTCTGGGTATGCTCACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCAGGAAAGAGCATACCAAGTGCTTCAACTCCAATTGTCTATTCAATACCATGCTGTGAGTGGCTTTaGGCTCAGGAGATGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPGKSIPSASTPIVYSIPCCEWL*AQEMAG Trigger: CCCAGCCATCTCCTGAGCGCAAAGCCACTCACAGCA...TGGTATTGAATAGACAATTGGAGTTGAAGCACTTGGTATGCTCTTTCCTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR GCA 90 bp | TCTACAACTACATCACAGCTCCTGCATCTATGCTTTAGGGAACATTGCAGAAGATTAGAACAGAGGTGGTaGAGATGGACAGACCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: STTTSQLLHLCFREHCRRLEQRW*RWTDPG Trigger: GCCGGGGTCTGTCCATCTGCACCACCTCTGTTCTAA...TCTTCTGCAATGTTCCCTAAAGCATAGATGCAGGAGCTGTGATGTAGTTGTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR GCA 90 bp | CAAGATGAACACAATGACAATAGCAATGGACACAGTAACATGGGGGTGGTGATTTTAGAACAGAGGTGGTaGAGATGGACAGACCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QDEHNDNSNGHSNMGVVILEQRW*RWTDPG Trigger: GCCGGGGTCTGTCCATCTGCACCACCTCTGTTCTAA...AATCACCACCCCCATGTTACTGTGTCCATTGCTATTGTCATTGTGTTCATCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR GCA 90 bp | CAAGATGAACACAATGACAATAGCAATGGACACAGTAACATGGGGGTGGTGATTTTTGGGCTGTGGAGATaGTGGGCTGTCTTGCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QDEHNDNSNGHSNMGVVIFGLWR*WAVLRC Trigger: ACACCGCAAGACAGCCCAGCATCTCCACAGCCCAAA...AATCACCACCCCCATGTTACTGTGTCCATTGCTATTGTCATTGTGTTCATCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCAGGAAAGAGCATACCAAGTGCTTCAACTCCAATTGTCTATTCAATACCATTTGGGCTGTGGAGATaGTGGGCTGTCTTGCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGKSIPSASTPIVYSIPFGLWR*WAVLRC Trigger: ACACCGCAAGACAGCCCAGCATCTCCACAGCCCAAA...TGGTATTGAATAGACAATTGGAGTTGAAGCACTTGGTATGCTCTTTCCTGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR GCA 90 bp | TGGGTGAGCATACCCAGAAAGACAAGTGCATATTCCTTTTCATCTTTGGTTCCTTTTGGGCTGTGGAGATaGTGGGCTGTCTTGCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WVSIPRKTSAYSFSSLVPFGLWR*WAVLRC Trigger: ACACCGCAAGACAGCCCAGCATCTCCACAGCCCAAA...AGGAACCAAAGATGAAAAGGAATATGCACTTGTCTTTCTGGGTATGCTCACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR GCA 90 bp | GGAAAGAGCATACCAAGTGCTTCAACTCCAATTGTCTATTCAATACCAAATGGCTTAGAACAGAGGTGGTaGAGATGGACAGACCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKSIPSASTPIVYSIPNGLEQRW*RWTDPG Trigger: GCCGGGGTCTGTCCATCTGCACCACCTCTGTTCTAA...GCCATTTGGTATTGAATAGACAATTGGAGTTGAAGCACTTGGTATGCTCTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR GCA 90 bp | TGCAGGATTTATTTTGTTGGTACATCTGTTGGGACTGGGATTCACTATTTTGCATGCTGTGAGTGGCTTTaGGCTCAGGAGATGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CRIYFVGTSVGTGIHYFACCEWL*AQEMAG Trigger: CCCAGCCATCTCCTGAGCGCAAAGCCACTCACAGCA...TGCAAAATAGTGAATCCCAGTCCCAACAGATGTACCAACAAAATAAATCCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR CCA 90 bp | TTATCAAAGAAGATCATTTTGCAGCAGACAGAGGCTACTGGAGAGATCTACAACGAAAGGTTTGGGCTGTaGAGATGCTGGGCTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSKKIILQQTEATGEIYNERFGL*RCWAVL Trigger: CAAGACAGCCCAGCATCTCCACAGCCCAAACCTTTC...GTTGTAGATCTCTCCAGTAGCCTCTGTCTGCTGCAAAATGATCTTCTTTGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR CCA 90 bp | GGAAAGAGCATACCAAGTGCTTCAACTCCAATTGTCTATTCAATACCAAATGGCGAAAGGTTTGGGCTGTaGAGATGCTGGGCTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GKSIPSASTPIVYSIPNGERFGL*RCWAVL Trigger: CAAGACAGCCCAGCATCTCCACAGCCCAAACCTTTC...GCCATTTGGTATTGAATAGACAATTGGAGTTGAAGCACTTGGTATGCTCTTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CAA 72 bp | TTACATGAGATGGCCAGTTCAGTTTATTATCCCCCATaGCCAGAAATCTTGGCTAGGGTCACCTGGGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LHEMASSVYYPP*PEILARVTWEL Trigger: TAACTCCCAGGTGACCCTAGCCAAGATTTCTGGCAATGGGGGATAATAAACTGAACTGGCCATCTCATGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR GCA 90 bp | CAAGATGAACACAATGACAATAGCAATGGACACAGTAACATGGGGGTGGTGATTGATGCTGGGCTGTCTTaGGGTGTCTGTATAGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QDEHNDNSNGHSNMGVVIDAGLS*GVCIGK Trigger: TTTTCCTATACAGACACCGCAAGACAGCCCAGCATC...AATCACCACCCCCATGTTACTGTGTCCATTGCTATTGTCATTGTGTTCATCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CAA 72 bp | GCGATGGTACAAGGACATCCATTGGATAATTACCAGTaGTTCCAGATAAGAGTCCCACCCACACCAGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: AMVQGHPLDNYQ*FQIRVPPTPVF Trigger: AAATACTGGTGTGGGTGGGACTCTTATCTGGAACAACTGGTAATTATCCAATGGATGTCCTTGTACCATCGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CAA 72 bp | CCCCAGGAAAGAGCATACCAAGTGCTTCAACTCCAATaGTCTATTCAATACCAAATGGCCAGCTCTGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: PQERAYQVLQLQ*SIQYQMASSDY Trigger: GTAATCAGAGCTGGCCATTTGGTATTGAATAGACAATTGGAGTTGAAGCACTTGGTATGCTCTTTCCTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCAGGAAAGAGCATACCAAGTGCTTCAACTCCAATTGTCTATTCAATACCACCGGCTGACTCTGAATaGAAACAAAACTGCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: SPGKSIPSASTPIVYSIPPADSE*KQNCLT Trigger: TGTAAGGCAGTTTTGTTTTCATTCAGAGTCAGCCGG...TGGTATTGAATAGACAATTGGAGTTGAAGCACTTGGTATGCTCTTTCCTGGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR TCA 90 bp | CAAGATGAACACAATGACAATAGCAATGGACACAGTAACATGGGGGTGGTGATTCCGGCTGACTCTGAATaGAAACAAAACTGCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: QDEHNDNSNGHSNMGVVIPADSE*KQNCLT Trigger: TGTAAGGCAGTTTTGTTTTCATTCAGAGTCAGCCGG...AATCACCACCCCCATGTTACTGTGTCCATTGCTATTGTCATTGTGTTCATCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR TCA 90 bp | TTATCAAAGAAGATCATTTTGCAGCAGACAGAGGCTACTGGAGAGATCTACAACTTGACAGTAACCATGTaGATATCCACGGCCAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSKKIILQQTEATGEIYNLTVTM*ISTANV Trigger: CACGTTGGCCGTGGATATTCACATGGTTACTGTCAA...GTTGTAGATCTCTCCAGTAGCCTCTGTCTGCTGCAAAATGATCTTCTTTGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR GCA 90 bp | GGAAAGAGCATACCAAGTGCTTCAACTCCAATTGTCTATTCAATACCAAATGGCGATGCTGGGCTGTCTTaGGGTGTCTGTATAGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GKSIPSASTPIVYSIPNGDAGLS*GVCIGK Trigger: TTTTCCTATACAGACACCGCAAGACAGCCCAGCATC...GCCATTTGGTATTGAATAGACAATTGGAGTTGAAGCACTTGGTATGCTCTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CAA 72 bp | CTTCCCCTTCCTAGAGCTTTAGGTGCAGGATTTATTTaGTTGGTACATCTGTTGGGACTGGGATTCACTATT | + |
|
Preference number: 4 (lower is better) Translates to: LPLPRALGAGFI*LVHLLGLGFTI Trigger: AATAGTGAATCCCAGTCCCAACAGATGTACCAACAAAATAAATCCTGCACCTAAAGCTCTAGGAAGGGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR TCA 90 bp | GGAAAGAGCATACCAAGTGCTTCAACTCCAATTGTCTATTCAATACCAAATGGCCCGGCTGACTCTGAATaGAAACAAAACTGCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: GKSIPSASTPIVYSIPNGPADSE*KQNCLT Trigger: TGTAAGGCAGTTTTGTTTTCATTCAGAGTCAGCCGG...GCCATTTGGTATTGAATAGACAATTGGAGTTGAAGCACTTGGTATGCTCTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR TCA 90 bp | TGCAGGATTTATTTTGTTGGTACATCTGTTGGGACTGGGATTCACTATTTTGCATTGACAGTAACCATGTaGATATCCACGGCCAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: CRIYFVGTSVGTGIHYFALTVTM*ISTANV Trigger: CACGTTGGCCGTGGATATTCACATGGTTACTGTCAA...TGCAAAATAGTGAATCCCAGTCCCAACAGATGTACCAACAAAATAAATCCTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCAGGAAAGAGCATACCAAGTGCTTCAACTCCAATTGTCTATTCAATACCAAAAAGCCATAAAGGGTaGTGGAGTTGTTCAACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPGKSIPSASTPIVYSIPKSHKG*WSCSTN Trigger: ATTGGTTGAACAACTCCATCACCCTTTATGGCTTTT...TGGTATTGAATAGACAATTGGAGTTGAAGCACTTGGTATGCTCTTTCCTGGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR TCA 90 bp | TCTACAACTACATCACAGCTCCTGCATCTATGCTTTAGGGAACATTGCAGAAGAAAAAGCCATAAAGGGTaGTGGAGTTGTTCAACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: STTTSQLLHLCFREHCRRKSHKG*WSCSTN Trigger: ATTGGTTGAACAACTCCATCACCCTTTATGGCTTTT...TCTTCTGCAATGTTCCCTAAAGCATAGATGCAGGAGCTGTGATGTAGTTGTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTGAGCATACCCAGAAAGACAAGTGCATATTCCTTTTCATCTTTGGTTCCTCCATGGAGTGAACTTTaGAAACTGGTCATTCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WVSIPRKTSAYSFSSLVPPWSEL*KLVILK Trigger: TTTGAGAATGACCAGTTTTCAAAGTTCACTCCATGG...AGGAACCAAAGATGAAAAGGAATATGCACTTGTCTTTCTGGGTATGCTCACCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR TCA 90 bp | TCTACAACTACATCACAGCTCCTGCATCTATGCTTTAGGGAACATTGCAGAAGACCATGGAGTGAACTTTaGAAACTGGTCATTCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: STTTSQLLHLCFREHCRRPWSEL*KLVILK Trigger: TTTGAGAATGACCAGTTTTCAAAGTTCACTCCATGG...TCTTCTGCAATGTTCCCTAAAGCATAGATGCAGGAGCTGTGATGTAGTTGTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCAGGAAAGAGCATACCAAGTGCTTCAACTCCAATTGTCTATTCAATACCACCATGGAGTGAACTTTaGAAACTGGTCATTCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPGKSIPSASTPIVYSIPPWSEL*KLVILK Trigger: TTTGAGAATGACCAGTTTTCAAAGTTCACTCCATGG...TGGTATTGAATAGACAATTGGAGTTGAAGCACTTGGTATGCTCTTTCCTGGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR TCA 90 bp | GGAAAGAGCATACCAAGTGCTTCAACTCCAATTGTCTATTCAATACCAAATGGCAAAAGCCATAAAGGGTaGTGGAGTTGTTCAACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GKSIPSASTPIVYSIPNGKSHKG*WSCSTN Trigger: ATTGGTTGAACAACTCCATCACCCTTTATGGCTTTT...GCCATTTGGTATTGAATAGACAATTGGAGTTGAAGCACTTGGTATGCTCTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTGAGCATACCCAGAAAGACAAGTGCATATTCCTTTTCATCTTTGGTTCCTAACCATCCTGAATCATaGCTCCCATATTTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WVSIPRKTSAYSFSSLVPNHPES*LPYFLF Trigger: AAACAAGAAATATGGGAGCCATGATTCAGGATGGTT...AGGAACCAAAGATGAAAAGGAATATGCACTTGTCTTTCTGGGTATGCTCACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCAGGAAAGAGCATACCAAGTGCTTCAACTCCAATTGTCTATTCAATACCAAACCATCCTGAATCATaGCTCCCATATTTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPGKSIPSASTPIVYSIPNHPES*LPYFLF Trigger: AAACAAGAAATATGGGAGCCATGATTCAGGATGGTT...TGGTATTGAATAGACAATTGGAGTTGAAGCACTTGGTATGCTCTTTCCTGGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CAA 72 bp | GAAGGAGAATTAGCATCTTCCATGGATGAACTCTTTTaGGTTGTCCCATGCAGAGTTGTCATTATACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: EGELASSMDELF*VVPCRVVIIHA Trigger: TGCATGTATAATGACAACTCTGCATGGGACAACCAAAAAGAGTTCATCCATGGAAGATGCTAATTCTCCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR CCA 90 bp | TGCAGGATTTATTTTGTTGGTACATCTGTTGGGACTGGGATTCACTATTTTGCAAACCATCCTGAATCATaGCTCCCATATTTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CRIYFVGTSVGTGIHYFANHPES*LPYFLF Trigger: AAACAAGAAATATGGGAGCCATGATTCAGGATGGTT...TGCAAAATAGTGAATCCCAGTCCCAACAGATGTACCAACAAAATAAATCCTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CAA 72 bp | CCATGGATGAACTCTTTTTGGTTGTCCCATGCAGAGTaGTCATTATACATGCAAACAACAGAAACAAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: PWMNSFWLSHAE*SLYMQTTETNS Trigger: TGAATTTGTTTCTGTTGTTTGCATGTATAATGACAACTCTGCATGGGACAACCAAAAAGAGTTCATCCATGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| 3UTR CAA 72 bp | AGTTGGGAATGCTGTAAATGTATTACAAGGATTTTCTaGGCAGACACTCTACTCCAATTCAAGTGTGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: SWECCKCITRIF*ADTLLQFKCEY Trigger: GTATTCACACTTGAATTGGAGTAGAGTGTCTGCCAAGAAAATCCTTGTAATACATTTACAGCATTCCCAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS CCA 90 bp | GCTCACCAGAAACAGGATGCTGTGAGTGGCTTTGCGCTCAGGAGATaGCTGGGAGGAAAGGTTTGGGCTGTGGAGATGCTGGGCTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AHQKQDAVSGFALRR*LGGKVWAVEMLGCL Trigger: AAGACAGCCCAGCATCTCCACAGCCCAAACCTTTCCTCCCAGCCATCTCCTGAGCGCAAAGCCACTCACAGCATCCTGTTTCTGGTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094828.3 ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGGATTTATTTTGTTGGTACATCTGTTGGGACTGGGATTCACTATTTTGCAATATCATCCAGAAAATaGGGTACTCTCCTCTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CRIYFVGTSVGTGIHYFAISSRK*GTLLLL Trigger: GAGCAAGAGGAGAGTACCCAATTTTCTGGATGATAT...TGCAAAATAGTGAATCCCAGTCCCAACAGATGTACCAACAAAATAAATCCTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000227700.2 |
||
| CDS CCA 72 bp | AAACAGGATGCTGTGAGTGGCTTTGCGCTCAGGAGATaGCTGGGAGGAAAGGTTTGGGCTGTGGAGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KQDAVSGFALRR*LGGKVWAVEML Trigger: CAGCATCTCCACAGCCCAAACCTTTCCTCCCAGCCATCTCCTGAGCGCAAAGCCACTCACAGCATCCTGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094828.3 ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS CCA 72 bp | ACACAAAGCAGCTCACCAGAAACAGGATGCTGTGAGTaGCTTTGCGCTCAGGAGATGGCTGGGAGGAAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TQSSSPETGCCE*LCAQEMAGRKG Trigger: ACCTTTCCTCCCAGCCATCTCCTGAGCGCAAAGCCACTCACAGCATCCTGTTTCTGGTGAGCTGCTTTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094828.3 ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS GCA 72 bp | AAAATTGGGTACTCTCCTCTTGCTCTGAGTGTGGAGTaGTTCAAACCCTGGTTCAGGGCAGTGTGTATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: KIGYSPLALSVE*FKPWFRAVCIH Trigger: GTGGATACACACTGCCCTGAACCAGGGTTTGAAGCACTCCACACTCAGAGCAAGAGGAGAGTACCCAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227700.2 |
||
| CDS TCA 72 bp | ATATCATCCAGAAAATTGGGTACTCTCCTCTTGCTCTaGGTGTGGAGTGCTTCAAACCCTGGTTCAGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ISSRKLGTLLLL*VWSASNPGSGQ Trigger: CTGCCCTGAACCAGGGTTTGAAGCACTCCACACTCAGAGCAAGAGGAGAGTACCCAATTTTCTGGATGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227700.2 |
||
| CDS CAA 72 bp | AACCATGTGAATATCCACGGCCAACGTGACTGTTATTaGTTTTCGCTATTACCAAATCAAGCATATACCCGT | + |
|
Preference number: 6 (lower is better) Translates to: NHVNIHGQRDCY*FSLLPNQAYTR Trigger: ACGGGTATATGCTTGATTTGGTAATAGCGAAAACAAATAACAGTCACGTTGGCCGTGGATATTCACATGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094828.3 ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||
| CDS TCA 72 bp | ATGGCTCCCATATTTCTTGTTTTGACAGTAACCATGTaGATATCCACGGCCAACGTGACTGTTATTTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: MAPIFLVLTVTM*ISTANVTVICF Trigger: AAAACAAATAACAGTCACGTTGGCCGTGGATATTCACATGGTTACTGTCAAAACAAGAAATATGGGAGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094828.3 ENSMUST00000226604.2 ENSMUST00000227220.2 ENSMUST00000227700.2 |
||