Pregenerated sensors for VMN1R84 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066803Ensembl transcript IDs: ENSMUST00000086228.3, ENSMUST00000226408.2, ENSMUST00000227427.2, ENSMUST00000228653.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGGTTTATTTTAGCTTGAAGTTTCAGGCAAGAAGTTTCATGGCATaGAAGTCGTGGAATCAGGAGGCTGAGGCAGCAGATCACTTTGCA | + |
|
Preference number: 1 (lower is better) Translates to: RVYFSLKFQARSFMA*KSWNQEAEAADHFA Trigger: TGCAAAGTGATCTGCTGCCTCAGCCTCCTGATTCCACGACTTTCATGCCATGAAACTTCTTGCCTGAAACTTCAAGCTAAAATAAACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR CCA 90 bp | AGATCACTTTGCATCTGTAGCCATAGAGCAGGGACAGATACACACTaGTTCTCAGTTTTCCTCATTTTATTCAGCCCTGCACTCTTAACC | + |
|
Preference number: 1 (lower is better) Translates to: RSLCICSHRAGTDTH*FSVFLILFSPALLT Trigger: GGTTAAGAGTGCAGGGCTGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGCTACAGATGCAAAGTGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR TCA 90 bp | AATCTGAAATGTGCCTACACAGCAGTTCATACCTCAAGACCTGGTTaGCTATCTGAAGGCATAAGAAATTCTGCAATACATGATGACCCC | + |
|
Preference number: 1 (lower is better) Translates to: NLKCAYTAVHTSRPG*LSEGIRNSAIHDDP Trigger: GGGGTCATCATGTATTGCAGAATTTCTTATGCCTTCAGATAGTCAACCAGGTCTTGAGGTATGAACTGCTGTGTAGGCACATTTCAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCATCGAACTCAGAAATCTaGCTGCCTCTGCCTCCCGAG | + |
|
Preference number: 2 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSSNSEI*LPLPPE Trigger: CTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGA...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCAAGGGGAATTTGGAAGTaGGACCACCAGCCCAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSRGIWK*DHQPRK Trigger: TTTTCTGGGCTGGTGGTCCCACTTCCAAATTCCCCT...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCTGCTTTTCTACAGATCAGTTGAAGCAGTGGGACAGGAATCTGAAATGTGCCACCTGGTTGACTATCTaGAGGCATAAGAAATTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LCFSTDQLKQWDRNLKCATWLTI*RHKKFC Trigger: GCAGAATTTCTTATGCCTTCAGATAGTCAACCAGGT...GGCACATTTCAGATTCCTGTCCCACTGCTTCAACTGATCTGTAGAAAAGCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCAACCTCAAGACCTGGTTaGCTATCTGAAGGCATAAGA | + |
|
Preference number: 2 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSTSRPG*LSEGIR Trigger: TCTTATGCCTTCAGATAGTCAACCAGGTCTTGAGGT...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGGATGGTTAGGGGTGTCTCTGATTTCAAGTGTAACTCTAAGAAAAACAGTAGGGGAATTTGGAAGTaGGACCACCAGCCCAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: FGMVRGVSDFKCNSKKNSRGIWK*DHQPRK Trigger: TTTTCTGGGCTGGTGGTCCCACTTCCAAATTCCCCT...ACTGTTTTTCTTAGAGTTACACTTGAAATCAGAGACACCCCTAACCATCCCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCACAAATAGGTATTACTTaGTTCTTCTTCCCTCAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSQIGIT*FFFPQG Trigger: CCCCTGAGGGAAGAAGAATCAAGTAATACCTATTTG...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCAAGTGACGTTGATACATaGAGAGAAACAGAGCAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSSDVDT*RETEQL Trigger: CAACTGCTCTGTTTCTCTGCATGTATCAACGTCACT...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCAGATCAGTTGAAGCAGTaGGACAGGAATCTGAAATGT | + |
|
Preference number: 2 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSDQLKQ*DRNLKC Trigger: ACATTTCAGATTCCTGTCCCACTGCTTCAACTGATC...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGAAACAGAGCAGTTGTCCACATAAATATGTTATCATATGCCAGAGATCCTACCTCAAGACCTGGTTaGCTATCTGAAGGCATAAGA | + |
|
Preference number: 2 (lower is better) Translates to: QRNRAVVHINMLSYARDPTSRPG*LSEGIR Trigger: TCTTATGCCTTCAGATAGTCAACCAGGTCTTGAGGT...AGGATCTCTGGCATATGATAACATATTTATGTGGACAACTGCTCTGTTTCTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTGGGATGGTTAGGGGTGTCTCTGATTTCAAGTGTAACTCTAAGAAAAACAGTACCTCAAGACCTGGTTaGCTATCTGAAGGCATAAGA | + |
|
Preference number: 2 (lower is better) Translates to: FGMVRGVSDFKCNSKKNSTSRPG*LSEGIR Trigger: TCTTATGCCTTCAGATAGTCAACCAGGTCTTGAGGT...ACTGTTTTTCTTAGAGTTACACTTGAAATCAGAGACACCCCTAACCATCCCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCAATGCAAATAGGTATTACTTGATTCTTCTTCCCTCAGGGGAATTTGGAAGTTTTCTACAGATCAGTTaGAGCAGTGGGACAGGAATC | + |
|
Preference number: 2 (lower is better) Translates to: INANRYYLILLPSGEFGSFLQIS*SSGTGI Trigger: GATTCCTGTCCCACTGCTTCAACTGATCTGTAGAAA...ACTTCCAAATTCCCCTGAGGGAAGAAGAATCAAGTAATACCTATTTGCATTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTGGGATGGTTAGGGGTGTCTCTGATTTCAAGTGTAACTCTAAGAAAAACAGTCAGGAATCTGAAATGTaGCTACACAGCAGTTCATAC | + |
|
Preference number: 2 (lower is better) Translates to: FGMVRGVSDFKCNSKKNSQESEM*LHSSSY Trigger: GTATGAACTGCTGTGTAGGCACATTTCAGATTCCTG...ACTGTTTTTCTTAGAGTTACACTTGAAATCAGAGACACCCCTAACCATCCCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGAAACAGAGCAGTTGTCCACATAAATATGTTATCATATGCCAGAGATCCTGATCAGTTGAAGCAGTaGGACAGGAATCTGAAATGT | + |
|
Preference number: 2 (lower is better) Translates to: QRNRAVVHINMLSYARDPDQLKQ*DRNLKC Trigger: ACATTTCAGATTCCTGTCCCACTGCTTCAACTGATC...AGGATCTCTGGCATATGATAACATATTTATGTGGACAACTGCTCTGTTTCTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCAATGCAAATAGGTATTACTTGATTCTTCTTCCCTCAGGGGAATTTGGAAGTCAGGAATCTGAAATGTaGCTACACAGCAGTTCATAC | + |
|
Preference number: 2 (lower is better) Translates to: INANRYYLILLPSGEFGSQESEM*LHSSSY Trigger: GTATGAACTGCTGTGTAGGCACATTTCAGATTCCTG...ACTTCCAAATTCCCCTGAGGGAAGAAGAATCAAGTAATACCTATTTGCATTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTaGCTCTGCCTCCCGAGTGCTGGGATTAAAGGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*LCLPSAGIKGN Trigger: ATTGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCAGAAATCTGCCTGCCTCTaGCTCCCGAGTGCTGGGATTAAAGGCAATTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: PGWPRTQKSACL*LPSAGIKGNFK Trigger: TTTAAAATTGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR TCA 72 bp | AAGTTTCATGGCATGAAAGTCGTGGAATCAGGAGGCTaGGGCAGCAGATCACTTTGCATCTGTAGCCATAGA | + |
|
Preference number: 3 (lower is better) Translates to: KFHGMKVVESGG*GSRSLCICSHR Trigger: TCTATGGCTACAGATGCAAAGTGATCTGCTGCCTCAGCCTCCTGATTCCACGACTTTCATGCCATGAAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR GCA 72 bp | AGATCAGTTGAAGCAGTGGGACAGGAATCTGAAATGTaGCTACACAGCAGTTCATACCTCAAGACCTGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: RSVEAVGQESEM*LHSSSYLKTWL Trigger: CAACCAGGTCTTGAGGTATGAACTGCTGTGTAGGCACATTTCAGATTCCTGTCCCACTGCTTCAACTGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR CCA 72 bp | TTTTTGCTCTGCTTTTCTACAGATCAGTTGAAGCAGTaGGACAGGAATCTGAAATGTGCCTACACAGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: FLLCFSTDQLKQ*DRNLKCAYTAV Trigger: AACTGCTGTGTAGGCACATTTCAGATTCCTGTCCCACTGCTTCAACTGATCTGTAGAAAAGCAGAGCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCATTTTCTACAGATCAGTaGAAGCAGTGGGACAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSFSTDQ*KQWDRN Trigger: ATTCCTGTCCCACTGCTTCAACTGATCTGTAGAAAA...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCAGCAAATAGGTATTACTaGATTCTTCTTCCCTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSANRYY*ILLPSG Trigger: CCCTGAGGGAAGAAGAATCAAGTAATACCTATTTGC...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGGATGGTTAGGGGTGTCTCTGATTTCAAGTGTAACTCTAAGAAAAACAGTTTTTCTACAGATCAGTaGAAGCAGTGGGACAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: FGMVRGVSDFKCNSKKNSFSTDQ*KQWDRN Trigger: ATTCCTGTCCCACTGCTTCAACTGATCTGTAGAAAA...ACTGTTTTTCTTAGAGTTACACTTGAAATCAGAGACACCCCTAACCATCCCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGGATGGTTAGGGGTGTCTCTGATTTCAAGTGTAACTCTAAGAAAAACAGTGCAAATAGGTATTACTaGATTCTTCTTCCCTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: FGMVRGVSDFKCNSKKNSANRYY*ILLPSG Trigger: CCCTGAGGGAAGAAGAATCAAGTAATACCTATTTGC...ACTGTTTTTCTTAGAGTTACACTTGAAATCAGAGACACCCCTAACCATCCCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR TCA 72 bp | TTTATTCAGCCCTGCACTCTTAACCAATGGATTAATTaGTATGAAGAACTAGATTGGGTCCTCCTACCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: FIQPCTLNQWIN*YEELDWVLLPP Trigger: TGGAGGTAGGAGGACCCAATCTAGTTCTTCATATCAATTAATCCATTGGTTAAGAGTGCAGGGCTGAATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTTTTCTACAGATCAGTTGAAGCAGTGGGACAGGAATCTGAAATGTGCCTGCAGTGCAGGGAAATaGCCCGGGACACTCGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: LCFSTDQLKQWDRNLKCACSAGK*PGTLDC Trigger: GCAATCGAGTGTCCCGGGGCATTTCCCTGCACTGCA...GGCACATTTCAGATTCCTGTCCCACTGCTTCAACTGATCTGTAGAAAAGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR TCA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCACTTCAGGGGAGACTCTaGGGGGATGGTGGGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSLQGRL*GDGGHC Trigger: ACAGTGCCCACCATCCCCTCAGAGTCTCCCCTGAAG...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR TCA 90 bp | TTTGGGATGGTTAGGGGTGTCTCTGATTTCAAGTGTAACTCTAAGAAAAACAGTCTTCAGGGGAGACTCTaGGGGGATGGTGGGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FGMVRGVSDFKCNSKKNSLQGRL*GDGGHC Trigger: ACAGTGCCCACCATCCCCTCAGAGTCTCCCCTGAAG...ACTGTTTTTCTTAGAGTTACACTTGAAATCAGAGACACCCCTAACCATCCCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR GCA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCAAACTCAAGAGGCAGGTaGAGTGCAGGGAAATGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSNSRGR*SAGKCP Trigger: GGGGCATTTCCCTGCACTGCACCTGCCTCTTGAGTT...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR TCA 90 bp | ATCAATGCAAATAGGTATTACTTGATTCTTCTTCCCTCAGGGGAATTTGGAAGTCTTCAGGGGAGACTCTaGGGGGATGGTGGGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: INANRYYLILLPSGEFGSLQGRL*GDGGHC Trigger: ACAGTGCCCACCATCCCCTCAGAGTCTCCCCTGAAG...ACTTCCAAATTCCCCTGAGGGAAGAAGAATCAAGTAATACCTATTTGCATTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR GCA 90 bp | TTTGGGATGGTTAGGGGTGTCTCTGATTTCAAGTGTAACTCTAAGAAAAACAGTTGCAGTGCAGGGAAATaGCCCGGGACACTCGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: FGMVRGVSDFKCNSKKNSCSAGK*PGTLDC Trigger: GCAATCGAGTGTCCCGGGGCATTTCCCTGCACTGCA...ACTGTTTTTCTTAGAGTTACACTTGAAATCAGAGACACCCCTAACCATCCCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CCA 90 bp | AAGCAGTGGGACAGGAATCTGAAATGTGCCTACACAGCAGTTCATACCTCAAGAGAACAAAATCCCCACTaGCAAGTTCTCAGGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KQWDRNLKCAYTAVHTSREQNPH*QVLRSH Trigger: ATGGCTCCTGAGAACTTGCCAGTGGGGATTTTGTTC...TCTTGAGGTATGAACTGCTGTGTAGGCACATTTCAGATTCCTGTCCCACTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR TCA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCAGTCATCAGCCTGGAGTaGCTGAGGCTGATTGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSVISLE*LRLIVI Trigger: AATCACAATCAGCCTCAGTCACTCCAGGCTGATGAC...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR GCA 90 bp | ATCAATGCAAATAGGTATTACTTGATTCTTCTTCCCTCAGGGGAATTTGGAAGTTGCAGTGCAGGGAAATaGCCCGGGACACTCGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: INANRYYLILLPSGEFGSCSAGK*PGTLDC Trigger: GCAATCGAGTGTCCCGGGGCATTTCCCTGCACTGCA...ACTTCCAAATTCCCCTGAGGGAAGAAGAATCAAGTAATACCTATTTGCATTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR GCA 90 bp | AAGCAGTGGGACAGGAATCTGAAATGTGCCTACACAGCAGTTCATACCTCAAGAGAGGCTGATTGTGATTaGTTGGAAGCAACTCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KQWDRNLKCAYTAVHTSREADCD*LEATQE Trigger: CTCTTGAGTTGCTTCCAAGCAATCACAATCAGCCTC...TCTTGAGGTATGAACTGCTGTGTAGGCACATTTCAGATTCCTGTCCCACTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTTTTCTACAGATCAGTTGAAGCAGTGGGACAGGAATCTGAAATGTGCCGAGGCTGATTGTGATTaGTTGGAAGCAACTCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCFSTDQLKQWDRNLKCAEADCD*LEATQE Trigger: CTCTTGAGTTGCTTCCAAGCAATCACAATCAGCCTC...GGCACATTTCAGATTCCTGTCCCACTGCTTCAACTGATCTGTAGAAAAGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCTTTTCTACAGATCAGTTGAAGCAGTGGGACAGGAATCTGAAATGTGCCCTGATTGTGATTGCTTaGAAGCAACTCAAGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCFSTDQLKQWDRNLKCALIVIA*KQLKRQ Trigger: CTGCCTCTTGAGTTGCTTCCAAGCAATCACAATCAG...GGCACATTTCAGATTCCTGTCCCACTGCTTCAACTGATCTGTAGAAAAGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR GCA 90 bp | ATCAATGCAAATAGGTATTACTTGATTCTTCTTCCCTCAGGGGAATTTGGAAGTAACTCAAGAGGCAGGTaGAGTGCAGGGAAATGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: INANRYYLILLPSGEFGSNSRGR*SAGKCP Trigger: GGGGCATTTCCCTGCACTGCACCTGCCTCTTGAGTT...ACTTCCAAATTCCCCTGAGGGAAGAAGAATCAAGTAATACCTATTTGCATTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CCA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCAGAACAAAATCCCCACTaGCAAGTTCTCAGGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSEQNPH*QVLRSH Trigger: ATGGCTCCTGAGAACTTGCCAGTGGGGATTTTGTTC...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR TCA 90 bp | TTTGGGATGGTTAGGGGTGTCTCTGATTTCAAGTGTAACTCTAAGAAAAACAGTGTCATCAGCCTGGAGTaGCTGAGGCTGATTGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: FGMVRGVSDFKCNSKKNSVISLE*LRLIVI Trigger: AATCACAATCAGCCTCAGTCACTCCAGGCTGATGAC...ACTGTTTTTCTTAGAGTTACACTTGAAATCAGAGACACCCCTAACCATCCCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGAAACAGAGCAGTTGTCCACATAAATATGTTATCATATGCCAGAGATCCTGTCATCAGCCTGGAGTaGCTGAGGCTGATTGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: QRNRAVVHINMLSYARDPVISLE*LRLIVI Trigger: AATCACAATCAGCCTCAGTCACTCCAGGCTGATGAC...AGGATCTCTGGCATATGATAACATATTTATGTGGACAACTGCTCTGTTTCTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR GCA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCATCATCCAGGAGATACTaGAACCCCAGTTGTACCATT | + |
|
Preference number: 4 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSSSRRY*NPSCTI Trigger: AATGGTACAACTGGGGTTGCAGTATCTCCTGGATGA...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR GCA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCAGAGGCTGATTGTGATTaGTTGGAAGCAACTCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSEADCD*LEATQE Trigger: CTCTTGAGTTGCTTCCAAGCAATCACAATCAGCCTC...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CCA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCACTGATTGTGATTGCTTaGAAGCAACTCAAGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSLIVIA*KQLKRQ Trigger: CTGCCTCTTGAGTTGCTTCCAAGCAATCACAATCAG...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR TCA 90 bp | AAGCAGTGGGACAGGAATCTGAAATGTGCCTACACAGCAGTTCATACCTCAAGAATAATGAAGAAGAATTaGCCAGTTACCAAGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: KQWDRNLKCAYTAVHTSRIMKKN*PVTKDS Trigger: GGAATCCTTGGTAACTGGTCAATTCTTCTTCATTAT...TCTTGAGGTATGAACTGCTGTGTAGGCACATTTCAGATTCCTGTCCCACTGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGCTTTTCTACAGATCAGTTGAAGCAGTGGGACAGGAATCTGAAATGTGCCATAATGAAGAAGAATTaGCCAGTTACCAAGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCFSTDQLKQWDRNLKCAIMKKN*PVTKDS Trigger: GGAATCCTTGGTAACTGGTCAATTCTTCTTCATTAT...GGCACATTTCAGATTCCTGTCCCACTGCTTCAACTGATCTGTAGAAAAGCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR TCA 90 bp | AAGCAGTGGGACAGGAATCTGAAATGTGCCTACACAGCAGTTCATACCTCAAGAGTGAGGTGTTACTCTTaGGATAATAACCAAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: KQWDRNLKCAYTAVHTSRVRCYS*DNNQGI Trigger: AATTCCTTGGTTATTATCTCAAGAGTAACACCTCAC...TCTTGAGGTATGAACTGCTGTGTAGGCACATTTCAGATTCCTGTCCCACTGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGCTTTTCTACAGATCAGTTGAAGCAGTGGGACAGGAATCTGAAATGTGCCAGTTGTACCATTATGTaGGGTGTTACTCTTGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: LCFSTDQLKQWDRNLKCASCTIM*GVTLEI Trigger: TATCTCAAGAGTAACACCTCACATAATGGTACAACT...GGCACATTTCAGATTCCTGTCCCACTGCTTCAACTGATCTGTAGAAAAGCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR TCA 90 bp | AAGCAGTGGGACAGGAATCTGAAATGTGCCTACACAGCAGTTCATACCTCAAGAAGTTGTACCATTATGTaGGGTGTTACTCTTGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: KQWDRNLKCAYTAVHTSRSCTIM*GVTLEI Trigger: TATCTCAAGAGTAACACCTCACATAATGGTACAACT...TCTTGAGGTATGAACTGCTGTGTAGGCACATTTCAGATTCCTGTCCCACTGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CCA 90 bp | TTTGGGATGGTTAGGGGTGTCTCTGATTTCAAGTGTAACTCTAAGAAAAACAGTGAACAAAATCCCCACTaGCAAGTTCTCAGGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FGMVRGVSDFKCNSKKNSEQNPH*QVLRSH Trigger: ATGGCTCCTGAGAACTTGCCAGTGGGGATTTTGTTC...ACTGTTTTTCTTAGAGTTACACTTGAAATCAGAGACACCCCTAACCATCCCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CCA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCATCAAGATGGTTTTTGTaGCTTTGTCTTCAGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSSRWFL*LCLQGR Trigger: TCTCCCCTGAAGACAAAGCCACAAAAACCATCTTGA...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR GCA 90 bp | AAGCAGTGGGACAGGAATCTGAAATGTGCCTACACAGCAGTTCATACCTCAAGATTGGCTAAAGTCAGATaGTTTAAAATCTGGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KQWDRNLKCAYTAVHTSRLAKVR*FKIWSL Trigger: CAAAGACCAGATTTTAAAGCATCTGACTTTAGCCAA...TCTTGAGGTATGAACTGCTGTGTAGGCACATTTCAGATTCCTGTCCCACTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGAAACAGAGCAGTTGTCCACATAAATATGTTATCATATGCCAGAGATCCTGAGGCTGATTGTGATTaGTTGGAAGCAACTCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QRNRAVVHINMLSYARDPEADCD*LEATQE Trigger: CTCTTGAGTTGCTTCCAAGCAATCACAATCAGCCTC...AGGATCTCTGGCATATGATAACATATTTATGTGGACAACTGCTCTGTTTCTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCTTTTCTACAGATCAGTTGAAGCAGTGGGACAGGAATCTGAAATGTGCCAGATGCTTTAAAATCTaGTCTTTGGGCATCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LCFSTDQLKQWDRNLKCARCFKI*SLGIKL Trigger: AAGTTTGATGCCCAAAGACCAGATTTTAAAGCATCT...GGCACATTTCAGATTCCTGTCCCACTGCTTCAACTGATCTGTAGAAAAGCAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CCA 90 bp | TTTGGGATGGTTAGGGGTGTCTCTGATTTCAAGTGTAACTCTAAGAAAAACAGTCTGATTGTGATTGCTTaGAAGCAACTCAAGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FGMVRGVSDFKCNSKKNSLIVIA*KQLKRQ Trigger: CTGCCTCTTGAGTTGCTTCCAAGCAATCACAATCAG...ACTGTTTTTCTTAGAGTTACACTTGAAATCAGAGACACCCCTAACCATCCCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGAAACAGAGCAGTTGTCCACATAAATATGTTATCATATGCCAGAGATCCTCTGATTGTGATTGCTTaGAAGCAACTCAAGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRNRAVVHINMLSYARDPLIVIA*KQLKRQ Trigger: CTGCCTCTTGAGTTGCTTCCAAGCAATCACAATCAG...AGGATCTCTGGCATATGATAACATATTTATGTGGACAACTGCTCTGTTTCTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CCA 90 bp | AAGCAGTGGGACAGGAATCTGAAATGTGCCTACACAGCAGTTCATACCTCAAGAACACAAGAATCAAGATaGTTTTTGTGGCTTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQWDRNLKCAYTAVHTSRTQESR*FLWLCL Trigger: AAGACAAAGCCACAAAAACCATCTTGATTCTTGTGT...TCTTGAGGTATGAACTGCTGTGTAGGCACATTTCAGATTCCTGTCCCACTGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCTTTTCTACAGATCAGTTGAAGCAGTGGGACAGGAATCTGAAATGTGCCACACAAGAATCAAGATaGTTTTTGTGGCTTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCFSTDQLKQWDRNLKCATQESR*FLWLCL Trigger: AAGACAAAGCCACAAAAACCATCTTGATTCTTGTGT...GGCACATTTCAGATTCCTGTCCCACTGCTTCAACTGATCTGTAGAAAAGCAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR TCA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCAATAATGAAGAAGAATTaGCCAGTTACCAAGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSIMKKN*PVTKDS Trigger: GGAATCCTTGGTAACTGGTCAATTCTTCTTCATTAT...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR TCA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCAAGTTGTACCATTATGTaGGGTGTTACTCTTGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSSCTIM*GVTLEI Trigger: TATCTCAAGAGTAACACCTCACATAATGGTACAACT...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CCA 90 bp | TTTGGGATGGTTAGGGGTGTCTCTGATTTCAAGTGTAACTCTAAGAAAAACAGTTCAAGATGGTTTTTGTaGCTTTGTCTTCAGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FGMVRGVSDFKCNSKKNSSRWFL*LCLQGR Trigger: TCTCCCCTGAAGACAAAGCCACAAAAACCATCTTGA...ACTGTTTTTCTTAGAGTTACACTTGAAATCAGAGACACCCCTAACCATCCCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| 3UTR CAA 72 bp | TGTAGAAATGTAGAAGTTACTCTCCAAAGCTGTGTATaGTCTAGACTGCCCTACATAGTAATAGGGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CRNVEVTLQSCV*SRLPYIVIGCK Trigger: CTTGCACCCTATTACTATGTAGGGCAGTCTAGACAATACACAGCTTTGGAGAGTAACTTCTACATTTCTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR GCA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCATTGGCTAAAGTCAGATaGTTTAAAATCTGGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSLAKVR*FKIWSL Trigger: CAAAGACCAGATTTTAAAGCATCTGACTTTAGCCAA...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CCA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCATTAAAATCTGGTCTTTaGGCATCAAACTTTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSLKSGL*ASNFFQ Trigger: CTGGAAAAAGTTTGATGCCCAAAGACCAGATTTTAA...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CCA 90 bp | ATCAATGCAAATAGGTATTACTTGATTCTTCTTCCCTCAGGGGAATTTGGAAGTTCAAGATGGTTTTTGTaGCTTTGTCTTCAGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: INANRYYLILLPSGEFGSSRWFL*LCLQGR Trigger: TCTCCCCTGAAGACAAAGCCACAAAAACCATCTTGA...ACTTCCAAATTCCCCTGAGGGAAGAAGAATCAAGTAATACCTATTTGCATTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR TCA 90 bp | TTTGGGATGGTTAGGGGTGTCTCTGATTTCAAGTGTAACTCTAAGAAAAACAGTATAATGAAGAAGAATTaGCCAGTTACCAAGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FGMVRGVSDFKCNSKKNSIMKKN*PVTKDS Trigger: GGAATCCTTGGTAACTGGTCAATTCTTCTTCATTAT...ACTGTTTTTCTTAGAGTTACACTTGAAATCAGAGACACCCCTAACCATCCCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGAAACAGAGCAGTTGTCCACATAAATATGTTATCATATGCCAGAGATCCTTTGGCTAAAGTCAGATaGTTTAAAATCTGGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QRNRAVVHINMLSYARDPLAKVR*FKIWSL Trigger: CAAAGACCAGATTTTAAAGCATCTGACTTTAGCCAA...AGGATCTCTGGCATATGATAACATATTTATGTGGACAACTGCTCTGTTTCTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CCA 90 bp | TTTGGGATGGTTAGGGGTGTCTCTGATTTCAAGTGTAACTCTAAGAAAAACAGTTTAAAATCTGGTCTTTaGGCATCAAACTTTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FGMVRGVSDFKCNSKKNSLKSGL*ASNFFQ Trigger: CTGGAAAAAGTTTGATGCCCAAAGACCAGATTTTAA...ACTGTTTTTCTTAGAGTTACACTTGAAATCAGAGACACCCCTAACCATCCCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGAAACAGAGCAGTTGTCCACATAAATATGTTATCATATGCCAGAGATCCTAGATGCTTTAAAATCTaGTCTTTGGGCATCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: QRNRAVVHINMLSYARDPRCFKI*SLGIKL Trigger: AAGTTTGATGCCCAAAGACCAGATTTTAAAGCATCT...AGGATCTCTGGCATATGATAACATATTTATGTGGACAACTGCTCTGTTTCTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR GCA 90 bp | ATCAATGCAAATAGGTATTACTTGATTCTTCTTCCCTCAGGGGAATTTGGAAGTTTGGCTAAAGTCAGATaGTTTAAAATCTGGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: INANRYYLILLPSGEFGSLAKVR*FKIWSL Trigger: CAAAGACCAGATTTTAAAGCATCTGACTTTAGCCAA...ACTTCCAAATTCCCCTGAGGGAAGAAGAATCAAGTAATACCTATTTGCATTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CCA 90 bp | ATCAATGCAAATAGGTATTACTTGATTCTTCTTCCCTCAGGGGAATTTGGAAGTAGATGCTTTAAAATCTaGTCTTTGGGCATCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: INANRYYLILLPSGEFGSRCFKI*SLGIKL Trigger: AAGTTTGATGCCCAAAGACCAGATTTTAAAGCATCT...ACTTCCAAATTCCCCTGAGGGAAGAAGAATCAAGTAATACCTATTTGCATTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CCA 90 bp | ATCAATGCAAATAGGTATTACTTGATTCTTCTTCCCTCAGGGGAATTTGGAAGTACACAAGAATCAAGATaGTTTTTGTGGCTTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: INANRYYLILLPSGEFGSTQESR*FLWLCL Trigger: AAGACAAAGCCACAAAAACCATCTTGATTCTTGTGT...ACTTCCAAATTCCCCTGAGGGAAGAAGAATCAAGTAATACCTATTTGCATTGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CAA 90 bp | AAGCAGTGGGACAGGAATCTGAAATGTGCCTACACAGCAGTTCATACCTCAAGAGCTGATTGTGATTGCTaGGAAGCAACTCAAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KQWDRNLKCAYTAVHTSRADCDC*EATQEA Trigger: TGCCTCTTGAGTTGCTTCCAAGCAATCACAATCAGC...TCTTGAGGTATGAACTGCTGTGTAGGCACATTTCAGATTCCTGTCCCACTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CAA 90 bp | AAGCAGTGGGACAGGAATCTGAAATGTGCCTACACAGCAGTTCATACCTCAAGAAGGCCAGTAACACCATaGCTGAAAGCAAATGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KQWDRNLKCAYTAVHTSRRPVTP*LKANAE Trigger: TTCAGCATTTGCTTTCAGCAATGGTGTTACTGGCCT...TCTTGAGGTATGAACTGCTGTGTAGGCACATTTCAGATTCCTGTCCCACTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGCTTTTCTACAGATCAGTTGAAGCAGTGGGACAGGAATCTGAAATGTGCCAGGCCAGTAACACCATaGCTGAAAGCAAATGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LCFSTDQLKQWDRNLKCARPVTP*LKANAE Trigger: TTCAGCATTTGCTTTCAGCAATGGTGTTACTGGCCT...GGCACATTTCAGATTCCTGTCCCACTGCTTCAACTGATCTGTAGAAAAGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGCTTTTCTACAGATCAGTTGAAGCAGTGGGACAGGAATCTGAAATGTGCCGAATCAAGATGGTTTTaGTGGCTTTGTCTTCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LCFSTDQLKQWDRNLKCAESRWF*WLCLQG Trigger: CCCCTGAAGACAAAGCCACAAAAACCATCTTGATTC...GGCACATTTCAGATTCCTGTCCCACTGCTTCAACTGATCTGTAGAAAAGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGCTTTTCTACAGATCAGTTGAAGCAGTGGGACAGGAATCTGAAATGTGCCGATTCCCACAGCTGTTaGAGAAAAGAACAAAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LCFSTDQLKQWDRNLKCADSHSC*RKEQNP Trigger: GGGATTTTGTTCTTTTCTCAAACAGCTGTGGGAATC...GGCACATTTCAGATTCCTGTCCCACTGCTTCAACTGATCTGTAGAAAAGCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CAA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCAGAATCAAGATGGTTTTaGTGGCTTTGTCTTCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSESRWF*WLCLQG Trigger: CCCCTGAAGACAAAGCCACAAAAACCATCTTGATTC...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGCTTTTCTACAGATCAGTTGAAGCAGTGGGACAGGAATCTGAAATGTGCCTTATTATCCACAGCCTaGGATTGTCAAAAACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LCFSTDQLKQWDRNLKCALLSTA*DCQKPQ Trigger: CTGTGGTTTTTGACAATCCAAGGCTGTGGATAATAA...GGCACATTTCAGATTCCTGTCCCACTGCTTCAACTGATCTGTAGAAAAGCAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CAA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCAGATTCCCACAGCTGTTaGAGAAAAGAACAAAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSDSHSC*RKEQNP Trigger: GGGATTTTGTTCTTTTCTCAAACAGCTGTGGGAATC...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGAAACAGAGCAGTTGTCCACATAAATATGTTATCATATGCCAGAGATCCTGCTGATTGTGATTGCTaGGAAGCAACTCAAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QRNRAVVHINMLSYARDPADCDC*EATQEA Trigger: TGCCTCTTGAGTTGCTTCCAAGCAATCACAATCAGC...AGGATCTCTGGCATATGATAACATATTTATGTGGACAACTGCTCTGTTTCTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CAA 90 bp | AAGCAGTGGGACAGGAATCTGAAATGTGCCTACACAGCAGTTCATACCTCAAGAACATCTATAGCTGTCTaGATGTTTAGAAGCAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: KQWDRNLKCAYTAVHTSRTSIAV*MFRSRC Trigger: ACATCTGCTTCTAAACATCAAGACAGCTATAGATGT...TCTTGAGGTATGAACTGCTGTGTAGGCACATTTCAGATTCCTGTCCCACTGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CAA 90 bp | TTTGGGATGGTTAGGGGTGTCTCTGATTTCAAGTGTAACTCTAAGAAAAACAGTGAATCAAGATGGTTTTaGTGGCTTTGTCTTCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FGMVRGVSDFKCNSKKNSESRWF*WLCLQG Trigger: CCCCTGAAGACAAAGCCACAAAAACCATCTTGATTC...ACTGTTTTTCTTAGAGTTACACTTGAAATCAGAGACACCCCTAACCATCCCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGAAACAGAGCAGTTGTCCACATAAATATGTTATCATATGCCAGAGATCCTGATTCCCACAGCTGTTaGAGAAAAGAACAAAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: QRNRAVVHINMLSYARDPDSHSC*RKEQNP Trigger: GGGATTTTGTTCTTTTCTCAAACAGCTGTGGGAATC...AGGATCTCTGGCATATGATAACATATTTATGTGGACAACTGCTCTGTTTCTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CAA 90 bp | GCCATAGAGCAGGGACAGATACACACTGGTTCTCAGTTTTCCTCATTTTATTCAACATCTATAGCTGTCTaGATGTTTAGAAGCAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: AIEQGQIHTGSQFSSFYSTSIAV*MFRSRC Trigger: ACATCTGCTTCTAAACATCAAGACAGCTATAGATGT...TGAATAAAATGAGGAAAACTGAGAACCAGTGTGTATCTGTCCCTGCTCTATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CAA 90 bp | ATCAATGCAAATAGGTATTACTTGATTCTTCTTCCCTCAGGGGAATTTGGAAGTAGGCCAGTAACACCATaGCTGAAAGCAAATGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: INANRYYLILLPSGEFGSRPVTP*LKANAE Trigger: TTCAGCATTTGCTTTCAGCAATGGTGTTACTGGCCT...ACTTCCAAATTCCCCTGAGGGAAGAAGAATCAAGTAATACCTATTTGCATTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS CCA 90 bp | AAATTCCTTCTACTACAGCAGGGTAAAGCGTTCTTAGGAGTAGATTaGTTATTACTGATAAGGATGAAGGGACAAAATGTGGGAAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KFLLLQQGKAFLGVD*LLLIRMKGQNVGKH Trigger: ATGCTTTCCCACATTTTGTCCCTTCATCCTTATCAGTAATAACCAATCTACTCCTAAGAACGCTTTACCCTGCTGTAGTAGAAGGAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGAAACAGAGCAGTTGTCCACATAAATATGTTATCATATGCCAGAGATCCTTTATTATCCACAGCCTaGGATTGTCAAAAACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: QRNRAVVHINMLSYARDPLLSTA*DCQKPQ Trigger: CTGTGGTTTTTGACAATCCAAGGCTGTGGATAATAA...AGGATCTCTGGCATATGATAACATATTTATGTGGACAACTGCTCTGTTTCTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGAAACAGAGCAGTTGTCCACATAAATATGTTATCATATGCCAGAGATCCTACATCTATAGCTGTCTaGATGTTTAGAAGCAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: QRNRAVVHINMLSYARDPTSIAV*MFRSRC Trigger: ACATCTGCTTCTAAACATCAAGACAGCTATAGATGT...AGGATCTCTGGCATATGATAACATATTTATGTGGACAACTGCTCTGTTTCTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS TCA 72 bp | TTTGAGACAGAGTGTGTAAGTGTCATCAGCCTGGAGTaGCTGAGGCTGATTGTGATTGCTTGGAAGCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: FETECVSVISLE*LRLIVIAWKQL Trigger: GAGTTGCTTCCAAGCAATCACAATCAGCCTCAGTCACTCCAGGCTGATGACACTTACACACTCTGTCTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS TCA 72 bp | AAGCCAGCTTATAGAGCAGAACTGAATCATGTATTTTaGGACAGAGTGTGTAAGTGTCATCAGCCTGGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: KPAYRAELNHVF*DRVCKCHQPGV Trigger: CACTCCAGGCTGATGACACTTACACACTCTGTCTCAAAATACATGATTCAGTTCTGCTCTATAAGCTGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS TCA 72 bp | TCCAGGAGATACTGCAACCCCAGTTGTACCATTATGTaGGGTGTTACTCTTGAGATAATAACCAAGGAATTG | + |
|
Preference number: 6 (lower is better) Translates to: SRRYCNPSCTIM*GVTLEIITKEL Trigger: CAATTCCTTGGTTATTATCTCAAGAGTAACACCTCACATAATGGTACAACTGGGGTTGCAGTATCTCCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS CAA 90 bp | CCATCAGTGAAACAAACAAAGAACAAATGTAGGCCAGTAACACCATaGCTGAAAGCAAATGCTGAACAGTATCCCAACATGATTTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSVKQTKNKCRPVTP*LKANAEQYPNMIFL Trigger: CAGGAAAATCATGTTGGGATACTGTTCAGCATTTGCTTTCAGCAATGGTGTTACTGGCCTACATTTGTTCTTTGTTTGTTTCACTGATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS TCA 72 bp | TCCAGTGATTACAGATGTGACATAATGAAGAAGAATTaGCCAGTTACCAAGGATTCCCACAGCTGTTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSDYRCDIMKKN*PVTKDSHSCLR Trigger: TCTCAAACAGCTGTGGGAATCCTTGGTAACTGGTCAATTCTTCTTCATTATGTCACATCTGTAATCACTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS TCA 72 bp | AGAAGCAGATGTAGAAGCCAGCTTATAGAGCAGAACTaGATCATGTATTTTGAGACAGAGTGTGTAAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RSRCRSQLIEQN*IMYFETECVSV Trigger: GACACTTACACACTCTGTCTCAAAATACATGATTCAGTTCTGCTCTATAAGCTGGCTTCTACATCTGCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS CCA 72 bp | CTACTACAGCAGGGTAAAGCGTTCTTAGGAGTAGATTaGTTATTACTGATAAGGATGAAGGGACAAAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLQQGKAFLGVD*LLLIRMKGQNV Trigger: CACATTTTGTCCCTTCATCCTTATCAGTAATAACCAATCTACTCCTAAGAACGCTTTACCCTGCTGTAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS CAA 72 bp | AAACAAACAAAGAACAAATGTAGGCCAGTAACACCATaGCTGAAAGCAAATGCTGAACAGTATCCCAACATG | + |
|
Preference number: 6 (lower is better) Translates to: KQTKNKCRPVTP*LKANAEQYPNM Trigger: CATGTTGGGATACTGTTCAGCATTTGCTTTCAGCAATGGTGTTACTGGCCTACATTTGTTCTTTGTTTGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS CAA 72 bp | GAATTGGCTAAAGTCAGATGCTTTAAAATCTGGTCTTaGGGCATCAAACTTTTTCCAGTGATTACAGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: ELAKVRCFKIWS*GIKLFPVITDV Trigger: CACATCTGTAATCACTGGAAAAAGTTTGATGCCCAAAGACCAGATTTTAAAGCATCTGACTTTAGCCAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||
| CDS CAA 72 bp | TTTATAGTATTTGGTCCAATCACATCTATAGCTGTCTaGATGTTTAGAAGCAGATGTAGAAGCCAGCTTATA | + |
|
Preference number: 6 (lower is better) Translates to: FIVFGPITSIAV*MFRSRCRSQLI Trigger: TATAAGCTGGCTTCTACATCTGCTTCTAAACATCAAGACAGCTATAGATGTGATTGGACCAAATACTATAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086228.3 ENSMUST00000226408.2 ENSMUST00000227427.2 ENSMUST00000228653.2 |
||