Pregenerated sensors for VMN1R82 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058132Ensembl transcript IDs: ENSMUST00000072801.5, ENSMUST00000191002.2, ENSMUST00000227672.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGTGAGATGGCAGAGTAGCATACAACCAGCTGAAAGGACAGGTTaGAGACTGAGGACAAGAAAAAGCAGTGATTGGACCTTCCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: GVRWQSSIQPAERTG*RLRTRKSSDWTFPS Trigger: GGAAGGGAAGGTCCAATCACTGCTTTTTCTTGTCCTCAGTCTCCAACCTGTCCTTTCAGCTGGTTGTATGCTACTCTGCCATCTCACACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR TCA 90 bp | CCATGGAGTGGTGTTGATTACTCTCTTGCTCCTCTTGGCTTCTTTTaGCCTTCCTTCTTGTATAACTCAGGACCATCAGCCCAGGGATGT | + |
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Preference number: 1 (lower is better) Translates to: PWSGVDYSLAPLGFF*PSFLYNSGPSAQGC Trigger: ACATCCCTGGGCTGATGGTCCTGAGTTATACAAGAAGGAAGGTCAAAAGAAGCCAAGAGGAGCAAGAGAGTAATCAACACCACTCCATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR TCA 90 bp | AGGAACCTGGAAGCAGGAGCTGATGCAATAGCCATGGAGTGGTGTTaGTTACTCTCTTGCTCCTCTTGGCTTCTTTTGACCTTCCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: RNLEAGADAIAMEWC*LLSCSSWLLLTFLL Trigger: AAGAAGGAAGGTCAAAAGAAGCCAAGAGGAGCAAGAGAGTAATCAACACCACTCCATGGCTATTGCATCAGCTCCTGCTTCCAGGTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR TCA 90 bp | GATGGCAGAGTAGCATACAACCAGCTGAAAGGACAGGTTGGAGACTaGGGACAAGAAAAAGCAGTGATTGGACCTTCCCTTCCTTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: DGRVAYNQLKGQVGD*GQEKAVIGPSLPFF Trigger: AAAGAAAGGAAGGGAAGGTCCAATCACTGCTTTTTCTTGTCCTCAGTCTCCAACCTGTCCTTTCAGCTGGTTGTATGCTACTCTGCCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR CCA 90 bp | AGAACCAAGGAATTTATTTGGCTTATTAATAGAGCAGGTGTGAGATaGCAGAGTAGCATACAACCAGCTGAAAGGACAGGTTGGAGACTG | + |
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Preference number: 1 (lower is better) Translates to: RTKEFIWLINRAGVR*QSSIQPAERTGWRL Trigger: CAGTCTCCAACCTGTCCTTTCAGCTGGTTGTATGCTACTCTGCCATCTCACACCTGCTCTATTAATAAGCCAAATAAATTCCTTGGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGGCTTATACTGCCCTTGCAGAGTACTCAAGTTTGGTTTGAAGCCCCTACGTAGCAGGGCAGGAACCTaGAAGCAGGAGCTGATGCAA | + |
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Preference number: 2 (lower is better) Translates to: KGLYCPCRVLKFGLKPLRSRAGT*KQELMQ Trigger: TTGCATCAGCTCCTGCTTCCAGGTTCCTGCCCTGCT...ACGTAGGGGCTTCAAACCAAACTTGAGTACTCTGCAAGGGCAGTATAAGCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTATAACTCCAATTTCAAGGGATTCCTATGTCCCAAGGTCTCACGAGCATTCCCTGGAAGCAGGAGCTaGTGCAATAGCCATGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: TYNSNFKGFLCPKVSRAFPGSRS*CNSHGV Trigger: CACTCCATGGCTATTGCATCAGCTCCTGCTTCCAGG...GAATGCTCGTGAGACCTTGGGACATAGGAATCCCTTGAAATTGGAGTTATAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTATCCCTGCAGGAATATCTCCTGGGACTGGCTTAAGAACTGGCAGCTCCTGGCAAGTAGACACAACTaGTCTTTTGAAACTGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: FYPCRNISWDWLKNWQLLASRHN*SFETGS Trigger: GCTGCCAGTTTCAAAAGATCAGTTGTGTCTACTTGC...CAGGAGCTGCCAGTTCTTAAGCCAGTCCCAGGAGATATTCCTGCAGGGATAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTATCCCTGCAGGAATATCTCCTGGGACTGGCTTAAGAACTGGCAGCTCCTGGGCTTATACTGCCCTTaGAGAGTACTCAAGTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: FYPCRNISWDWLKNWQLLGLYCP*RVLKFG Trigger: ACCAAACTTGAGTACTCTGCAAGGGCAGTATAAGCC...CAGGAGCTGCCAGTTCTTAAGCCAGTCCCAGGAGATATTCCTGCAGGGATAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR CCA 90 bp | ATATCTCCTGGGACTGGCTTAAGAACTGGCAGCTCCTGGGTAGGTAACTATAGCCAGAGTACTCAAGTTTaGTTTGAAGCCCCTACGTTG | + |
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Preference number: 2 (lower is better) Translates to: ISPGTGLRTGSSWVGNYSQSTQV*FEAPTL Trigger: CAACGTAGGGGCTTCAAACCAAACTTGAGTACTCTG...GCTATAGTTACCTACCCAGGAGCTGCCAGTTCTTAAGCCAGTCCCAGGAGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGGCTTATACTGCCCTTGCAGAGTACTCAAGTTTGGTTTGAAGCCCCTACGTGCAGTAGCAACATTCTaGATGAGTTCAGCAGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: KGLYCPCRVLKFGLKPLRAVATF*MSSAAS Trigger: AGAAGCTGCTGAACTCATTCAGAATGTTGCTACTGC...ACGTAGGGGCTTCAAACCAAACTTGAGTACTCTGCAAGGGCAGTATAAGCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTATCCCTGCAGGAATATCTCCTGGGACTGGCTTAAGAACTGGCAGCTCCTGTGTCCATGCTCTGCATaGAGTTCTGGAATAAAAATG | + |
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Preference number: 2 (lower is better) Translates to: FYPCRNISWDWLKNWQLLCPCSA*SSGIKM Trigger: CATTTTTATTCCAGAACTGCATGCAGAGCATGGACA...CAGGAGCTGCCAGTTCTTAAGCCAGTCCCAGGAGATATTCCTGCAGGGATAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR CCA 90 bp | AGTACTCAAGTTTGGTTTGAAGCCCCTACGTTGAGCAGTTTACAATCACCTATAAGCAGGGCAGGAACCTaGAAGCAGGAGCTGATGCAA | + |
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Preference number: 2 (lower is better) Translates to: STQVWFEAPTLSSLQSPISRAGT*KQELMQ Trigger: TTGCATCAGCTCCTGCTTCCAGGTTCCTGCCCTGCT...TATAGGTGATTGTAAACTGCTCAACGTAGGGGCTTCAAACCAAACTTGAGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR TCA 90 bp | AGTACTCAAGTTTGGTTTGAAGCCCCTACGTTGAGCAGTTTACAATCACCTATAGCCATGGAGTGGTGTTaGTTACTCTCTTGCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: STQVWFEAPTLSSLQSPIAMEWC*LLSCSS Trigger: AGAGGAGCAAGAGAGTAATCAACACCACTCCATGGC...TATAGGTGATTGTAAACTGCTCAACGTAGGGGCTTCAAACCAAACTTGAGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGGCTTATACTGCCCTTGCAGAGTACTCAAGTTTGGTTTGAAGCCCCTACGTTATGAAATGCTATCTTaGACCTTCAACCGGACCAAT | + |
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Preference number: 2 (lower is better) Translates to: KGLYCPCRVLKFGLKPLRYEMLS*TFNRTN Trigger: ATTGGTCCGGTTGAAGGTTCAAGATAGCATTTCATA...ACGTAGGGGCTTCAAACCAAACTTGAGTACTCTGCAAGGGCAGTATAAGCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR TCA 90 bp | CTATCTGAGTTACCTGATAGACACTGTCTTAGTTACATTCAACAAAACACCAGGGCCATGGAGTGGTGTTaGTTACTCTCTTGCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LSELPDRHCLSYIQQNTRAMEWC*LLSCSS Trigger: AGAGGAGCAAGAGAGTAATCAACACCACTCCATGGC...CCTGGTGTTTTGTTGAATGTAACTAAGACAGTGTCTATCAGGTAACTCAGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCCTTTCTTTATAGAATGTCAGCAGTCAACAAACCCATGTGTGATGATATTTCCTGGAAGCAGGAGCTaGTGCAATAGCCATGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: LPFFIECQQSTNPCVMIFPGSRS*CNSHGV Trigger: CACTCCATGGCTATTGCATCAGCTCCTGCTTCCAGG...AAATATCATCACACATGGGTTTGTTGACTGCTGACATTCTATAAAGAAAGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGATCCTCACCCACATGCCTACTCTCATAATTTCTTCTTCTCCTTCCCTATAGCATGGGTCTACCCCTaGAGCATATTTATTATACCT | + |
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Preference number: 2 (lower is better) Translates to: LDPHPHAYSHNFFFSFPIAWVYP*SIFIIP Trigger: AGGTATAATAAATATGCTTCAGGGGTAGACCCATGC...TATAGGGAAGGAGAAGAAGAAATTATGAGAGTAGGCATGTGGGTGAGGATCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR CCA 90 bp | AGTACTCAAGTTTGGTTTGAAGCCCCTACGTTGAGCAGTTTACAATCACCTATACTCTCTTGCTCCTCTTaGCTTCTTTTGACCTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: STQVWFEAPTLSSLQSPILSCSS*LLLTFL Trigger: AAGGAAGGTCAAAAGAAGCCAAGAGGAGCAAGAGAG...TATAGGTGATTGTAAACTGCTCAACGTAGGGGCTTCAAACCAAACTTGAGTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR TCA 90 bp | GGTTTATTCTGCTTACACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGATACAAAAGAATGGATCTaGGAACCCTCTGAACATGAA | + |
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Preference number: 2 (lower is better) Translates to: GLFCLHFHIAVHHQGSQDTKEWI*EPSEHE Trigger: TTCATGTTCAGAGGGTTCTCAGATCCATTCTTTTGT...ATCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAGCAGAATAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGATCCTCACCCACATGCCTACTCTCATAATTTCTTCTTCTCCTTCCCTATAATTCCCCTCATTCTGTaGTTCCAAAGACAAACCAAA | + |
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Preference number: 2 (lower is better) Translates to: LDPHPHAYSHNFFFSFPIIPLIL*FQRQTK Trigger: TTTGGTTTGTCTTTGGAATCACAGAATGAGGGGAAT...TATAGGGAAGGAGAAGAAGAAATTATGAGAGTAGGCATGTGGGTGAGGATCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR GCA 90 bp | GTGATTCCAAAGACAAACCAAAGCTCAATCCAACCACTGGAGAACCAAGGAATTTGTCCATGCTCTGCATaGAGTTCTGGAATAAAAATG | + |
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Preference number: 2 (lower is better) Translates to: VIPKTNQSSIQPLENQGICPCSA*SSGIKM Trigger: CATTTTTATTCCAGAACTGCATGCAGAGCATGGACA...AATTCCTTGGTTCTCCAGTGGTTGGATTGAGCTTTGGTTTGTCTTTGGAATCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR CCA 90 bp | AGTACTCAAGTTTGGTTTGAAGCCCCTACGTTGAGCAGTTTACAATCACCTATAAGGCTGAGATGGCCATaGCTTTCTAATTTACTAATG | + |
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Preference number: 2 (lower is better) Translates to: STQVWFEAPTLSSLQSPIRLRWP*LSNLLM Trigger: CATTAGTAAATTAGAAAGCCATGGCCATCTCAGCCT...TATAGGTGATTGTAAACTGCTCAACGTAGGGGCTTCAAACCAAACTTGAGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGATCCTCACCCACATGCCTACTCTCATAATTTCTTCTTCTCCTTCCCTATACTCTGCATGCAGTTCTaGAATAAAAATGCTGTTAGA | + |
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Preference number: 2 (lower is better) Translates to: LDPHPHAYSHNFFFSFPILCMQF*NKNAVR Trigger: TCTAACAGCATTTTTATTCCAGAACTGCATGCAGAG...TATAGGGAAGGAGAAGAAGAAATTATGAGAGTAGGCATGTGGGTGAGGATCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCAATTAGCTTATCAATATGCACATGGATATGAGGCCATCTGTTGTAATACACTCTCTTGCTCCTCTTaGCTTCTTTTGACCTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LQLAYQYAHGYEAICCNTLSCSS*LLLTFL Trigger: AAGGAAGGTCAAAAGAAGCCAAGAGGAGCAAGAGAG...TGTATTACAACAGATGGCCTCATATCCATGTGCATATTGATAAGCTAATTGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCAATTAGCTTATCAATATGCACATGGATATGAGGCCATCTGTTGTAATACAGCTGAAAGGACAGGTTaGAGACTGAGGACAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: LQLAYQYAHGYEAICCNTAERTG*RLRTRK Trigger: TTTTCTTGTCCTCAGTCTCCAACCTGTCCTTTCAGC...TGTATTACAACAGATGGCCTCATATCCATGTGCATATTGATAAGCTAATTGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCCTTTCTTTATAGAATGTCAGCAGTCAACAAACCCATGTGTGATGATATTTCCTCTTGGCTTCTTTTaGCCTTCCTTCTTGTATAAC | + |
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Preference number: 2 (lower is better) Translates to: LPFFIECQQSTNPCVMIFPLGFF*PSFLYN Trigger: GTTATACAAGAAGGAAGGTCAAAAGAAGCCAAGAGG...AAATATCATCACACATGGGTTTGTTGACTGCTGACATTCTATAAAGAAAGGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCAATTAGCTTATCAATATGCACATGGATATGAGGCCATCTGTTGTAATACAACAAAAGAATGGATCTaGGAACCCTCTGAACATGAA | + |
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Preference number: 2 (lower is better) Translates to: LQLAYQYAHGYEAICCNTTKEWI*EPSEHE Trigger: TTCATGTTCAGAGGGTTCTCAGATCCATTCTTTTGT...TGTATTACAACAGATGGCCTCATATCCATGTGCATATTGATAAGCTAATTGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCAATTAGCTTATCAATATGCACATGGATATGAGGCCATCTGTTGTAATACATGTTCTGAAATTGCCTaGATTCCTAGGTGTTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: LQLAYQYAHGYEAICCNTCSEIA*IPRCFQ Trigger: TTGAAAACACCTAGGAATTCAGGCAATTTCAGAACA...TGTATTACAACAGATGGCCTCATATCCATGTGCATATTGATAAGCTAATTGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCAATTAGCTTATCAATATGCACATGGATATGAGGCCATCTGTTGTAATACACTCTGCATGCAGTTCTaGAATAAAAATGCTGTTAGA | + |
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Preference number: 2 (lower is better) Translates to: LQLAYQYAHGYEAICCNTLCMQF*NKNAVR Trigger: TCTAACAGCATTTTTATTCCAGAACTGCATGCAGAG...TGTATTACAACAGATGGCCTCATATCCATGTGCATATTGATAAGCTAATTGCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCAATTAGCTTATCAATATGCACATGGATATGAGGCCATCTGTTGTAATACAATAATTTCAGTGTCTTaGATGGCATGGATTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LQLAYQYAHGYEAICCNTIISVS*MAWIVL Trigger: AAGAACAATCCATGCCATGCAAGACACTGAAATTAT...TGTATTACAACAGATGGCCTCATATCCATGTGCATATTGATAAGCTAATTGCAA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR CAA 90 bp | TTCTATCCCTGCAGGAATATCTCCTGGGACTGGCTTAAGAACTGGCAGCTCCTGCTTGCATGGCATGGATaGTTCTTATGTCTCTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: FYPCRNISWDWLKNWQLLLAWHG*FLCLSP Trigger: AGGAGAGAGACATAAGAACAATCCATGCCATGCAAG...CAGGAGCTGCCAGTTCTTAAGCCAGTCCCAGGAGATATTCCTGCAGGGATAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR TCA 72 bp | GAAGCAGGAGCTGATGCAATAGCCATGGAGTGGTGTTaGTTACTCTCTTGCTCCTCTTGGCTTCTTTTGACC | + |
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Preference number: 3 (lower is better) Translates to: EAGADAIAMEWC*LLSCSSWLLLT Trigger: GGTCAAAAGAAGCCAAGAGGAGCAAGAGAGTAATCAACACCACTCCATGGCTATTGCATCAGCTCCTGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR GCA 72 bp | GTCTGGAGAGATGGATCAGTGGTTAAGGGCTTATACTaGCCTTGCAGAGTACTCAAGTTTGGTTTGAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: VWRDGSVVKGLY*PCRVLKFGLKP Trigger: GGGCTTCAAACCAAACTTGAGTACTCTGCAAGGGCAGTATAAGCCCTTAACCACTGATCCATCTCTCCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR CCA 72 bp | TGGCAGAGTAGCATACAACCAGCTGAAAGGACAGGTTaGAGACTGAGGACAAGAAAAAGCAGTGATTGGACC | + |
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Preference number: 3 (lower is better) Translates to: WQSSIQPAERTG*RLRTRKSSDWT Trigger: GGTCCAATCACTGCTTTTTCTTGTCCTCAGTCTCCAACCTGTCCTTTCAGCTGGTTGTATGCTACTCTGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR CAA 90 bp | ATATCTCCTGGGACTGGCTTAAGAACTGGCAGCTCCTGGGTAGGTAACTATAGCGACACAACTGATCTTTaGAAACTGGCAGCTGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: ISPGTGLRTGSSWVGNYSDTTDL*KLAAVW Trigger: CCAAACAGCTGCCAGTTTCAAAAGATCAGTTGTGTC...GCTATAGTTACCTACCCAGGAGCTGCCAGTTCTTAAGCCAGTCCCAGGAGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR CAA 90 bp | TTCTATCCCTGCAGGAATATCTCCTGGGACTGGCTTAAGAACTGGCAGCTCCTGGCTTCCAGGAAAGTGTaGAACAAGAAATACTTGTCA | + |
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Preference number: 3 (lower is better) Translates to: FYPCRNISWDWLKNWQLLASRKV*NKKYLS Trigger: TGACAAGTATTTCTTGTTCAACACTTTCCTGGAAGC...CAGGAGCTGCCAGTTCTTAAGCCAGTCCCAGGAGATATTCCTGCAGGGATAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR TCA 72 bp | GTAGCATACAACCAGCTGAAAGGACAGGTTGGAGACTaGGGACAAGAAAAAGCAGTGATTGGACCTTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: VAYNQLKGQVGD*GQEKAVIGPSL Trigger: AAGGGAAGGTCCAATCACTGCTTTTTCTTGTCCTCAGTCTCCAACCTGTCCTTTCAGCTGGTTGTATGCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR GCA 72 bp | AGAGATGGATCAGTGGTTAAGGGCTTATACTGCCCTTaGAGAGTACTCAAGTTTGGTTTGAAGCCCCTACGT | + |
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Preference number: 3 (lower is better) Translates to: RDGSVVKGLYCP*RVLKFGLKPLR Trigger: ACGTAGGGGCTTCAAACCAAACTTGAGTACTCTGCAAGGGCAGTATAAGCCCTTAACCACTGATCCATCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR CCA 72 bp | ACCATCAGCCCAGGGATGTCACCACTCACAATAGGCTaGGCCATACTCAACTGTTCACTAATTGAGAAAATG | + |
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Preference number: 3 (lower is better) Translates to: TISPGMSPLTIG*AILNCSLIEKM Trigger: CATTTTCTCAATTAGTGAACAGTTGAGTATGGCCCAGCCTATTGTGAGTGGTGACATCCCTGGGCTGATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGGCTTATACTGCCCTTGCAGAGTACTCAAGTTTGGTTTGAAGCCCCTACGTGTGTTGATTACTCTCTaGCTCCTCTTGGCTTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: KGLYCPCRVLKFGLKPLRVLITL*LLLASF Trigger: AAAAGAAGCCAAGAGGAGCAAGAGAGTAATCAACAC...ACGTAGGGGCTTCAAACCAAACTTGAGTACTCTGCAAGGGCAGTATAAGCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR TCA 72 bp | GGTGTTGATTACTCTCTTGCTCCTCTTGGCTTCTTTTaGCCTTCCTTCTTGTATAACTCAGGACCATCAGCC | + |
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Preference number: 3 (lower is better) Translates to: GVDYSLAPLGFF*PSFLYNSGPSA Trigger: GGCTGATGGTCCTGAGTTATACAAGAAGGAAGGTCAAAAGAAGCCAAGAGGAGCAAGAGAGTAATCAACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR TCA 72 bp | GAAACTGGCAGCTGTTTGGGGCTTCCAGGAAAGTGTTaGACAAGAAATACTTGTCACTTAACAATCACTCCC | + |
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Preference number: 3 (lower is better) Translates to: ETGSCLGLPGKC*TRNTCHLTITP Trigger: GGGAGTGATTGTTAAGTGACAAGTATTTCTTGTTCAACACTTTCCTGGAAGCCCCAAACAGCTGCCAGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR GCA 72 bp | CATTTATCTGGAACAGTAGGACAAGGGAAAAGCCTATaGATGGAGTGGATTCTATGTCACAACTGCTGGGTA | + |
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Preference number: 3 (lower is better) Translates to: HLSGTVGQGKSL*MEWILCHNCWV Trigger: TACCCAGCAGTTGTGACATAGAATCCACTCCATGCATAGGCTTTTCCCTTGTCCTACTGTTCCAGATAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
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| 3UTR TCA 72 bp | ACTCAGTGTATGATATCTTCTGCAGTAGCAACATTCTaGATGAGTTCAGCAGCTTCTATGAGGCTGAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: TQCMISSAVATF*MSSAASMRLRW Trigger: CCATCTCAGCCTCATAGAAGCTGCTGAACTCATTCAGAATGTTGCTACTGCAGAAGATATCATACACTGAGT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| 3UTR CCA 72 bp | GCTCAATCCAACCACTGGAGAACCAAGGAATTTATTTaGCTTATTAATAGAGCAGGTGTGAGATGGCAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: AQSNHWRTKEFI*LINRAGVRWQS Trigger: ACTCTGCCATCTCACACCTGCTCTATTAATAAGCCAAATAAATTCCTTGGTTCTCCAGTGGTTGGATTGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAGATCCTCACCCACATGCCTACTCTCATAATTTCTTCTTCTCCTTCCCTATACTAACTTGTGTCAAGTaGACACACAAAACCAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LDPHPHAYSHNFFFSFPILTCVK*THKTRE Trigger: CTCTCTGGTTTTGTGTGTCAACTTGACACAAGTTAG...TATAGGGAAGGAGAAGAAGAAATTATGAGAGTAGGCATGTGGGTGAGGATCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGTTACCTGATAGACACTGTCTTAGTTACATTCAACAAAACACCAGGACTACTAACTTGTGTCAAGTaGACACACAAAACCAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSYLIDTVLVTFNKTPGLLTCVK*THKTRE Trigger: CTCTCTGGTTTTGTGTGTCAACTTGACACAAGTTAG...TAGTCCTGGTGTTTTGTTGAATGTAACTAAGACAGTGTCTATCAGGTAACTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGATTCCAAAGACAAACCAAAGCTCAATCCAACCACTGGAGAACCAAGGAATTTCTAATGACTCTAACTaGTGTCAAGTTGACACACAA | + |
|
Preference number: 3 (lower is better) Translates to: VIPKTNQSSIQPLENQGISNDSN*CQVDTQ Trigger: TTGTGTGTCAACTTGACACAAGTTAGAGTCATTAGA...AATTCCTTGGTTCTCCAGTGGTTGGATTGAGCTTTGGTTTGTCTTTGGAATCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| 3UTR GCA 72 bp | TACAGGTCTATACACTTGCTAACAATGTCCATGCTCTaGATGCAGTTCTGGAATAAAAATGCTGTTAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: YRSIHLLTMSML*MQFWNKNAVRR Trigger: TCTTCTAACAGCATTTTTATTCCAGAACTGCATGCAGAGCATGGACATTGTTAGCAAGTGTATAGACCTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| 3UTR CCA 72 bp | TGCATGCAGTTCTGGAATAAAAATGCTGTTAGAAGATaGCTTAAGGATCATTTCGAGAGGACTAAGAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: CMQFWNKNAVRR*LKDHFERTKNQ Trigger: CTGATTCTTAGTCCTCTCGAAATGATCCTTAAGCCATCTTCTAACAGCATTTTTATTCCAGAACTGCATGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCTTTCTTTATAGAATGTCAGCAGTCAACAAACCCATGTGTGATGATATTTGTGTTGATTACTCTCTaGCTCCTCTTGGCTTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LPFFIECQQSTNPCVMIFVLITL*LLLASF Trigger: AAAAGAAGCCAAGAGGAGCAAGAGAGTAATCAACAC...AAATATCATCACACATGGGTTTGTTGACTGCTGACATTCTATAAAGAAAGGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCTTTCTTTATAGAATGTCAGCAGTCAACAAACCCATGTGTGATGATATTTGCTTCCAGGAAAGTGTaGAACAAGAAATACTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LPFFIECQQSTNPCVMIFASRKV*NKKYLS Trigger: TGACAAGTATTTCTTGTTCAACACTTTCCTGGAAGC...AAATATCATCACACATGGGTTTGTTGACTGCTGACATTCTATAAAGAAAGGAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGTCAGGATAGGAATTCAAGCAGGGCAGGAACCTGGAAGCAGGAGCTGATGCACTGGCCCAGGACATaGGACTCAAACACAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: GSQDRNSSRAGTWKQELMHWPRT*DSNTEH Trigger: ATGTTCTGTGTTTGAGTCTCATGTCCTGGGCCAGTG...CATCAGCTCCTGCTTCCAGGTTCCTGCCCTGCTTGAATTCCTATCCTGACTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR TCA 90 bp | GTAGCTGGATCTCATGGAAGCATTTCCTCAACTGAGGCTCCTTATACTCTAATGGGAGGATGCTCAGCATaGAGACACTGGCCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: VAGSHGSISSTEAPYTLMGGCSA*RHWPRT Trigger: TGTCCTGGGCCAGTGTCTTCATGCTGAGCATCCTCC...CATTAGAGTATAAGGAGCCTCAGTTGAGGAAATGCTTCCATGAGATCCAGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR TCA 90 bp | ACCTATAACTCCAATTTCAAGGGATTCCTATGTCCCAAGGTCTCACGAGCATTCGGAGGATGCTCAGCATaGAGACACTGGCCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TYNSNFKGFLCPKVSRAFGGCSA*RHWPRT Trigger: TGTCCTGGGCCAGTGTCTTCATGCTGAGCATCCTCC...GAATGCTCGTGAGACCTTGGGACATAGGAATCCCTTGAAATTGGAGTTATAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGCTTATACTGCCCTTGCAGAGTACTCAAGTTTGGTTTGAAGCCCCTACGTTGCTTCTTGTGCCTGTaGAGGATGCTCAGCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KGLYCPCRVLKFGLKPLRCFLCL*RMLSMK Trigger: CTTCATGCTGAGCATCCTCCACAGGCACAAGAAGCA...ACGTAGGGGCTTCAAACCAAACTTGAGTACTCTGCAAGGGCAGTATAAGCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR TCA 90 bp | ACCTATAACTCCAATTTCAAGGGATTCCTATGTCCCAAGGTCTCACGAGCATTCCATAGGCCAACTGAGTaGGCAGGAAGGACCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: TYNSNFKGFLCPKVSRAFHRPTE*AGRTHV Trigger: TACATGGGTCCTTCCTGCTCACTCAGTTGGCCTATG...GAATGCTCGTGAGACCTTGGGACATAGGAATCCCTTGAAATTGGAGTTATAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTATTCTGCTTACACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGATTGGATGTACTGGACCTaGTTCTTGTGCCTGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLFCLHFHIAVHHQGSQDWMYWT*FLCLWR Trigger: CCTCCACAGGCACAAGAAGCAGGTCCAGTACATCCA...ATCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAGCAGAATAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR CCA 90 bp | CTATCTGAGTTACCTGATAGACACTGTCTTAGTTACATTCAACAAAACACCAGGTGGTTTGGGTGGCCCTaGCCTCAGGAGAGACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSELPDRHCLSYIQQNTRWFGWP*PQERLS Trigger: TGAGAGTCTCTCCTGAGGCCAGGGCCACCCAAACCA...CCTGGTGTTTTGTTGAATGTAACTAAGACAGTGTCTATCAGGTAACTCAGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR CCA 90 bp | CTAGATCCTCACCCACATGCCTACTCTCATAATTTCTTCTTCTCCTTCCCTATATTAGTATGGTTTGGGTaGCCCTGGCCTCAGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LDPHPHAYSHNFFFSFPILVWFG*PWPQER Trigger: TCTCTCCTGAGGCCAGGGCCACCCAAACCATACTAA...TATAGGGAAGGAGAAGAAGAAATTATGAGAGTAGGCATGTGGGTGAGGATCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTATTCTGCTTACACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGATTTAGTATGGTTTGGGTaGCCCTGGCCTCAGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLFCLHFHIAVHHQGSQDLVWFG*PWPQER Trigger: TCTCTCCTGAGGCCAGGGCCACCCAAACCATACTAA...ATCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAGCAGAATAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR CCA 90 bp | CTAGATCCTCACCCACATGCCTACTCTCATAATTTCTTCTTCTCCTTCCCTATAAGGATTAGTATGGTTTaGGTGGCCCTGGCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LDPHPHAYSHNFFFSFPIRISMV*VALASG Trigger: TCCTGAGGCCAGGGCCACCCAAACCATACTAATCCT...TATAGGGAAGGAGAAGAAGAAATTATGAGAGTAGGCATGTGGGTGAGGATCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR GCA 90 bp | CTATCTGAGTTACCTGATAGACACTGTCTTAGTTACATTCAACAAAACACCAGGTGGACCTGCTTCTTGTaGCTGTGGAGGATGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSELPDRHCLSYIQQNTRWTCFL*LWRMLS Trigger: GCTGAGCATCCTCCACAGGCACAAGAAGCAGGTCCA...CCTGGTGTTTTGTTGAATGTAACTAAGACAGTGTCTATCAGGTAACTCAGATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGTTACCTGATAGACACTGTCTTAGTTACATTCAACAAAACACCAGGACTATGGACCTGCTTCTTGTaGCTGTGGAGGATGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSYLIDTVLVTFNKTPGLWTCFL*LWRMLS Trigger: GCTGAGCATCCTCCACAGGCACAAGAAGCAGGTCCA...TAGTCCTGGTGTTTTGTTGAATGTAACTAAGACAGTGTCTATCAGGTAACTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR TCA 90 bp | AGTACTCAAGTTTGGTTTGAAGCCCCTACGTTGAGCAGTTTACAATCACCTATACACTGGCCCAGGACATaGGACTCAAACACAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: STQVWFEAPTLSSLQSPIHWPRT*DSNTEH Trigger: ATGTTCTGTGTTTGAGTCTCATGTCCTGGGCCAGTG...TATAGGTGATTGTAAACTGCTCAACGTAGGGGCTTCAAACCAAACTTGAGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGTTACCTGATAGACACTGTCTTAGTTACATTCAACAAAACACCAGGACTATGGATGTACTGGACCTaGTTCTTGTGCCTGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSYLIDTVLVTFNKTPGLWMYWT*FLCLWR Trigger: CCTCCACAGGCACAAGAAGCAGGTCCAGTACATCCA...TAGTCCTGGTGTTTTGTTGAATGTAACTAAGACAGTGTCTATCAGGTAACTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAACAGTAGGACAAGGGAAAAGCCTATGCATGGAGTGGATTCTATGTCAACTCTCAGGAAATGTTaGACACCATGGATGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: IWNSRTREKPMHGVDSMSTLRKC*TPWMYW Trigger: CCAGTACATCCATGGTGTCCAACATTTCCTGAGAGT...TGACATAGAATCCACTCCATGCATAGGCTTTTCCCTTGTCCTACTGTTCCAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCTTTCTTTATAGAATGTCAGCAGTCAACAAACCCATGTGTGATGATATTTTGGTTTGGGTGGCCCTaGCCTCAGGAGAGACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPFFIECQQSTNPCVMIFWFGWP*PQERLS Trigger: TGAGAGTCTCTCCTGAGGCCAGGGCCACCCAAACCA...AAATATCATCACACATGGGTTTGTTGACTGCTGACATTCTATAAAGAAAGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGGAACAGTAGGACAAGGGAAAAGCCTATGCATGGAGTGGATTCTATGTCACTGATTATGGCCGCTTaGAAACAACTCAAAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IWNSRTREKPMHGVDSMSLIMAA*KQLKRH Trigger: ATGCCTTTTGAGTTGTTTCCAAGCGGCCATAATCAG...TGACATAGAATCCACTCCATGCATAGGCTTTTCCCTTGTCCTACTGTTCCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072801.5 |
||
| CDS-3UTR CCA 90 bp | CTATCTGAGTTACCTGATAGACACTGTCTTAGTTACATTCAACAAAACACCAGGTGCTTCTTGTGCCTGTaGAGGATGCTCAGCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSELPDRHCLSYIQQNTRCFLCL*RMLSMK Trigger: CTTCATGCTGAGCATCCTCCACAGGCACAAGAAGCA...CCTGGTGTTTTGTTGAATGTAACTAAGACAGTGTCTATCAGGTAACTCAGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR CCA 90 bp | CTATCTGAGTTACCTGATAGACACTGTCTTAGTTACATTCAACAAAACACCAGGACACCATGGATGTACTaGACCTGCTTCTTGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSELPDRHCLSYIQQNTRTPWMY*TCFLCL Trigger: CAGGCACAAGAAGCAGGTCCAGTACATCCATGGTGT...CCTGGTGTTTTGTTGAATGTAACTAAGACAGTGTCTATCAGGTAACTCAGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| 3UTR CAA 72 bp | GCTCCTTATACTCTAATGACTCTAACTTGTGTCAAGTaGACACACAAAACCAGAGAGTTACCGACACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: APYTLMTLTCVK*THKTRELPTLS Trigger: GGACAGTGTCGGTAACTCTCTGGTTTTGTGTGTCAACTTGACACAAGTTAGAGTCATTAGAGTATAAGGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR TCA 90 bp | TTGCAATTAGCTTATCAATATGCACATGGATATGAGGCCATCTGTTGTAATACACATAGGCCAACTGAGTaGGCAGGAAGGACCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LQLAYQYAHGYEAICCNTHRPTE*AGRTHV Trigger: TACATGGGTCCTTCCTGCTCACTCAGTTGGCCTATG...TGTATTACAACAGATGGCCTCATATCCATGTGCATATTGATAAGCTAATTGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR CCA 90 bp | TTGCAATTAGCTTATCAATATGCACATGGATATGAGGCCATCTGTTGTAATACAAGGATTAGTATGGTTTaGGTGGCCCTGGCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQLAYQYAHGYEAICCNTRISMV*VALASG Trigger: TCCTGAGGCCAGGGCCACCCAAACCATACTAATCCT...TGTATTACAACAGATGGCCTCATATCCATGTGCATATTGATAAGCTAATTGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR CCA 90 bp | TTGCAATTAGCTTATCAATATGCACATGGATATGAGGCCATCTGTTGTAATACAACACCATGGATGTACTaGACCTGCTTCTTGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQLAYQYAHGYEAICCNTTPWMY*TCFLCL Trigger: CAGGCACAAGAAGCAGGTCCAGTACATCCATGGTGT...TGTATTACAACAGATGGCCTCATATCCATGTGCATATTGATAAGCTAATTGCAA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGTTACCTGATAGACACTGTCTTAGTTACATTCAACAAAACACCAGGACTAACTCTCAGGAAATGTTaGACACCATGGATGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSYLIDTVLVTFNKTPGLTLRKC*TPWMYW Trigger: CCAGTACATCCATGGTGTCCAACATTTCCTGAGAGT...TAGTCCTGGTGTTTTGTTGAATGTAACTAAGACAGTGTCTATCAGGTAACTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| 3UTR CAA 72 bp | TTGCAGAGTACTCAAGTTTGGTTTGAAGCCCCTACGTaGAGCAGTTTACAATCACCTATAACTCCAATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LQSTQVWFEAPT*SSLQSPITPIS Trigger: TGAAATTGGAGTTATAGGTGATTGTAAACTGCTCAACGTAGGGGCTTCAAACCAAACTTGAGTACTCTGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR TCA 90 bp | TTGCAATTAGCTTATCAATATGCACATGGATATGAGGCCATCTGTTGTAATACAGTAATGAAGCAGAACTaGGGAATTAACCAGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQLAYQYAHGYEAICCNTVMKQN*GINQDS Trigger: GGAATCCTGGTTAATTCCTCAGTTCTGCTTCATTAC...TGTATTACAACAGATGGCCTCATATCCATGTGCATATTGATAAGCTAATTGCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072801.5 |
||
| CDS-3UTR GCA 90 bp | CTGAGTTACCTGATAGACACTGTCTTAGTTACATTCAACAAAACACCAGGACTATTTCATCCCAAATTCTaGCATTATCTGTGGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSYLIDTVLVTFNKTPGLFHPKF*HYLWNS Trigger: GGAATTCCACAGATAATGGCAGAATTTGGGATGAAA...TAGTCCTGGTGTTTTGTTGAATGTAACTAAGACAGTGTCTATCAGGTAACTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072801.5 |
||
| 3UTR CAA 72 bp | GTGTCTTCATTTTTCTTTTTGCTAATGACTCCTAGGTaGCAATTAGCTTATCAATATGCACATGGATATGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSSFFFLLMTPR*QLAYQYAHGYE Trigger: CTCATATCCATGTGCATATTGATAAGCTAATTGCAACCTAGGAGTCATTAGCAAAAAGAAAAATGAAGACAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR CAA 90 bp | ATATCTCCTGGGACTGGCTTAAGAACTGGCAGCTCCTGGGTAGGTAACTATAGCTTTACAATTAGGGTTTaGAGCTTCAAACCTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ISPGTGLRTGSSWVGNYSFTIRV*SFKPFP Trigger: TGGGAAAGGTTTGAAGCTCAAAACCCTAATTGTAAA...GCTATAGTTACCTACCCAGGAGCTGCCAGTTCTTAAGCCAGTCCCAGGAGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072801.5 |
||
| CDS-3UTR CAA 90 bp | ATCTGGAACAGTAGGACAAGGGAAAAGCCTATGCATGGAGTGGATTCTATGTCAATAATAGACAAGGAGTaGGCCAGAGTTAAGTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IWNSRTREKPMHGVDSMSIIDKE*ARVKCF Trigger: AAAGCACTTAACTCTGGCCAACTCCTTGTCTATTAT...TGACATAGAATCCACTCCATGCATAGGCTTTTCCCTTGTCCTACTGTTCCAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072801.5 |
||
| CDS-3UTR CAA 90 bp | TTGCAATTAGCTTATCAATATGCACATGGATATGAGGCCATCTGTTGTAATACAGTGGCATTCCTTCTGTaGCTAGAGCTTGTCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LQLAYQYAHGYEAICCNTVAFLL*LELVTV Trigger: GACAGTGACAAGCTCTAGCAACAGAAGGAATGCCAC...TGTATTACAACAGATGGCCTCATATCCATGTGCATATTGATAAGCTAATTGCAA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS-3UTR CAA 90 bp | AGTACTCAAGTTTGGTTTGAAGCCCCTACGTTGAGCAGTTTACAATCACCTATAAAAACTGAGATGATGTaGATAACCCACAATCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: STQVWFEAPTLSSLQSPIKTEMM*ITHNPG Trigger: TCCAGGATTGTGGGTTATCAACATCATCTCAGTTTT...TATAGGTGATTGTAAACTGCTCAACGTAGGGGCTTCAAACCAAACTTGAGTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS GCA 90 bp | GGAATTCCTCTAGAGATAATAGACAAGGAGTTGGCCAGAGTTAAGTaGTTTACAATTAGGGTTTTGAGCTTCAAACCTTTCCCAGTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GIPLEIIDKELARVK*FTIRVLSFKPFPVN Trigger: ATTTACTGGGAAAGGTTTGAAGCTCAAAACCCTAATTGTAAAGCACTTAACTCTGGCCAACTCCTTGTCTATTATCTCTAGAGGAATTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000191002.2 |
||
| CDS-3UTR CAA 90 bp | CTATCTGAGTTACCTGATAGACACTGTCTTAGTTACATTCAACAAAACACCAGGAAAACTGAGATGATGTaGATAACCCACAATCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSELPDRHCLSYIQQNTRKTEMM*ITHNPG Trigger: TCCAGGATTGTGGGTTATCAACATCATCTCAGTTTT...CCTGGTGTTTTGTTGAATGTAACTAAGACAGTGTCTATCAGGTAACTCAGATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000227672.2 |
||
| CDS CCA 72 bp | AAGTGCATGCAAGGATTAGTATGGTTTGGGTGGCCCTaGCCTCAGGAGAGACTCTCAGGAAATGTTGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: KCMQGLVWFGWP*PQERLSGNVGH Trigger: GTGTCCAACATTTCCTGAGAGTCTCTCCTGAGGCCAGGGCCACCCAAACCATACTAATCCTTGCATGCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072801.5 ENSMUST00000191002.2 ENSMUST00000227672.2 |
||
| CDS CAA 72 bp | CTGAGTGAGCAGGAAGGACCCATGTACTTGATGGCTTaGTGTTTAAACTTCATCCATTTGGTGGTGCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSEQEGPMYLMA*CLNFIHLVVLE Trigger: CTCAAGCACCACCAAATGGATGAAGTTTAAACACAAAGCCATCAAGTACATGGGTCCTTCCTGCTCACTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000191002.2 |
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| CDS CAA 90 bp | ATAGGCCAACTGAGTGAGCAGGAAGGACCCATGTACTTGATGGCTTaGTGTTTAAACTTCATCCATTTGGTGGTGCTTGAGCTGATTATG | + |
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Preference number: 6 (lower is better) Translates to: IGQLSEQEGPMYLMA*CLNFIHLVVLELIM Trigger: CATAATCAGCTCAAGCACCACCAAATGGATGAAGTTTAAACACAAAGCCATCAAGTACATGGGTCCTTCCTGCTCACTCAGTTGGCCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000191002.2 |
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| CDS TCA 72 bp | ATACAAGGGAGTTGCAATAGTGCCAGAAACAGATGCTaGGCAGTACCCATAGGTCAGTTTCTTAGTGGCATT | + |
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Preference number: 6 (lower is better) Translates to: IQGSCNSARNRC*AVPIGQFLSGI Trigger: AATGCCACTAAGAAACTGACCTATGGGTACTGCTCAGCATCTGTTTCTGGCACTATTGCAACTCCCTTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072801.5 ENSMUST00000191002.2 ENSMUST00000227672.2 |
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| CDS CAA 72 bp | ATAGGCCAACTGAGTGAGCAGGAAGGACCCATGTACTaGATGGCTTTGTGTTTAAACTTCATCCATTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: IGQLSEQEGPMY*MALCLNFIHLV Trigger: CACCAAATGGATGAAGTTTAAACACAAAGCCATCAAGTACATGGGTCCTTCCTGCTCACTCAGTTGGCCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000191002.2 |
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| CDS CAA 72 bp | GAGTTGGCCAGAGTTAAGTGCTTTACAATTAGGGTTTaGAGCTTCAAACCTTTCCCAGTAAATCCTGGGACT | + |
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Preference number: 6 (lower is better) Translates to: ELARVKCFTIRV*SFKPFPVNPGT Trigger: AGTCCCAGGATTTACTGGGAAAGGTTTGAAGCTCAAAACCCTAATTGTAAAGCACTTAACTCTGGCCAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000191002.2 |
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| CDS GCA 72 bp | AGAACTGAGGAATTAACCAGGATTCCTACAGTAGTCTaGAGGATGAAGACTATACCCATTACCATGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RTEELTRIPTVV*RMKTIPITMFS Trigger: AGAGAACATGGTAATGGGTATAGTCTTCATCCTGCAGACTACTGTAGGAATCCTGGTTAATTCCTCAGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000191002.2 |
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| CDS CAA 90 bp | TCTGCCATTATCTGTGGAATTCCTCTAGAGATAATAGACAAGGAGTaGGCCAGAGTTAAGTGCTTTACAATTAGGGTTTTGAGCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: SAIICGIPLEIIDKE*ARVKCFTIRVLSFK Trigger: TTTGAAGCTCAAAACCCTAATTGTAAAGCACTTAACTCTGGCCAACTCCTTGTCTATTATCTCTAGAGGAATTCCACAGATAATGGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000191002.2 |
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| CDS GCA 72 bp | CTAGAGATAATAGACAAGGAGTTGGCCAGAGTTAAGTaGTTTACAATTAGGGTTTTGAGCTTCAAACCTTTC | + |
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Preference number: 6 (lower is better) Translates to: LEIIDKELARVK*FTIRVLSFKPF Trigger: GAAAGGTTTGAAGCTCAAAACCCTAATTGTAAAGCACTTAACTCTGGCCAACTCCTTGTCTATTATCTCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000191002.2 |
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| CDS GCA 72 bp | CCCAATGTCATCCAGAAAATATTTCATCCCAAATTCTaGCATTATCTGTGGAATTCCTCTAGAGATAATAGA | + |
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Preference number: 6 (lower is better) Translates to: PNVIQKIFHPKF*HYLWNSSRDNR Trigger: TCTATTATCTCTAGAGGAATTCCACAGATAATGGCAGAATTTGGGATGAAATATTTTCTGGATGACATTGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072801.5 ENSMUST00000191002.2 |
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