Pregenerated sensors for VMN1R79 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096735Ensembl transcript IDs: ENSMUST00000062811.6, ENSMUST00000226953.2, ENSMUST00000227530.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTTTCCACAAATGCATCTCTCCCACTGCTTCTACCTTATCACGATaGACAGAACTTTCAGATGAGAGGGTGAAAGAAACCTTTCCACCT | + |
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Preference number: 1 (lower is better) Translates to: SFHKCISPTASTLSR*TELSDERVKETFPP Trigger: AGGTGGAAAGGTTTCTTTCACCCTCTCATCTGAAAGTTCTGTCCATCGTGATAAGGTAGAAGCAGTGGGAGAGATGCATTTGTGGAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR CCA 90 bp | TGGGATTTTTATGCCTGTGTTATCTCTGTTGTTTGGGTGTCACTGTaGTTCAAAGTACCTGTGAGGCCTCTTGGGTTTCTAGAACAGAAT | + |
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Preference number: 1 (lower is better) Translates to: WDFYACVISVVWVSL*FKVPVRPLGFLEQN Trigger: ATTCTGTTCTAGAAACCCAAGAGGCCTCACAGGTACTTTGAACCACAGTGACACCCAAACAACAGAGATAACACAGGCATAAAAATCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR CCA 90 bp | AAGTGCCTGGTAACCCCAATAGTAGTTGGGCTACCAATGTTGAAATaGGAGTATCTTACTAAAGTGGTCATTGTTGAAGTGCACAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: KCLVTPIVVGLPMLK*EYLTKVVIVEVHSV Trigger: AACACTGTGCACTTCAACAATGACCACTTTAGTAAGATACTCCCATTTCAACATTGGTAGCCCAACTACTATTGGGGTTACCAGGCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR TCA 90 bp | ATAAATCTCTATATTGTTTCTGATTCCCTCTCTGGTGATCTGACCTaGAGGGCCTGTGCTTTTGGTGACCAGCAAATCTTCAGATCAATT | + |
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Preference number: 1 (lower is better) Translates to: INLYIVSDSLSGDLT*RACAFGDQQIFRSI Trigger: AATTGATCTGAAGATTTGCTGGTCACCAAAAGCACAGGCCCTTCAGGTCAGATCACCAGAGAGGGAATCAGAAACAATATAGAGATTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR GCA 90 bp | GTGCTTTTGGTGACCAGCAAATCTTCAGATCAATTAGAATGTCTTTaGTGGGATTTTTATGCCTGTGTTATCTCTGTTGTTTGGGTGTCA | + |
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Preference number: 1 (lower is better) Translates to: VLLVTSKSSDQLECL*WDFYACVISVVWVS Trigger: TGACACCCAAACAACAGAGATAACACAGGCATAAAAATCCCAGCAAAGACATTCTAATTGATCTGAAGATTTGCTGGTCACCAAAAGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR CCA 90 bp | CTTTTGGTGACCAGCAAATCTTCAGATCAATTAGAATGTCTTTGCTaGGATTTTTATGCCTGTGTTATCTCTGTTGTTTGGGTGTCACTG | + |
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Preference number: 1 (lower is better) Translates to: LLVTSKSSDQLECLC*DFYACVISVVWVSL Trigger: CAGTGACACCCAAACAACAGAGATAACACAGGCATAAAAATCCCAGCAAAGACATTCTAATTGATCTGAAGATTTGCTGGTCACCAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCTGTGTTATCTCTGTTGTTTGGGTGTCACTGTGGTTCAAAGTACCTGTGAGTCCCTAGGACATCCTTaGTCCATGGGAAAACAGCTG | + |
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Preference number: 2 (lower is better) Translates to: CLCYLCCLGVTVVQSTCESLGHP*SMGKQL Trigger: CAGCTGTTTTCCCATGGACCAAGGATGTCCTAGGGA...CTCACAGGTACTTTGAACCACAGTGACACCCAAACAACAGAGATAACACAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR GCA 90 bp | GATAAGTCCAAAGAAACACTCACACAGGTAGACATGCAGAGACCTTCCATACGGGTGTGCCCTTATGGCTaGTCTTTCATCATGACCTCA | + |
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Preference number: 2 (lower is better) Translates to: DKSKETLTQVDMQRPSIRVCPYG*SFIMTS Trigger: TGAGGTCATGATGAAAGAGCAGCCATAAGGGCACAC...CCGTATGGAAGGTCTCTGCATGTCTACCTGTGTGAGTGTTTCTTTGGACTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR TCA 90 bp | GTTATCTCTGTTGTTTGGGTGTCACTGTGGTTCAAAGTACCTGTGAGGCCTCTTGATGAAGGCCATCTTTaGATCTGGATGACACCATAC | + |
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Preference number: 2 (lower is better) Translates to: VISVVWVSLWFKVPVRPLDEGHL*IWMTPY Trigger: GTATGGTGTCATCCAGATTCAAAGATGGCCTTCATC...AAGAGGCCTCACAGGTACTTTGAACCACAGTGACACCCAAACAACAGAGATAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCTGTGTTATCTCTGTTGTTTGGGTGTCACTGTGGTTCAAAGTACCTGTGAGTCCTCTTTCCACAAATaGATCTCTCCCACTGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: CLCYLCCLGVTVVQSTCESSFHK*ISPTAS Trigger: AGAAGCAGTGGGAGAGATGCATTTGTGGAAAGAGGA...CTCACAGGTACTTTGAACCACAGTGACACCCAAACAACAGAGATAACACAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAAGGATAAGTCCAAAGAAACACTCACACAGGTAGACATGCAGAGACCTTCCCGATGTGTGCCCTTATaGCTGCTCTTTCATCATGAC | + |
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Preference number: 2 (lower is better) Translates to: VKDKSKETLTQVDMQRPSRCVPL*LLFHHD Trigger: GTCATGATGAAAGAGCAGCCATAAGGGCACACATCG...GGAAGGTCTCTGCATGTCTACCTGTGTGAGTGTTTCTTTGGACTTATCCTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR TCA 90 bp | GATAAGTCCAAAGAAACACTCACACAGGTAGACATGCAGAGACCTTCCATACGGGTGTTTCAGGAAGTTTaGATGAGTGATGAAGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: DKSKETLTQVDMQRPSIRVFQEV*MSDEGH Trigger: ATGGCCTTCATCACTCATTCAAACTTCCTGAAACAC...CCGTATGGAAGGTCTCTGCATGTCTACCTGTGTGAGTGTTTCTTTGGACTTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR TCA 90 bp | GTTATCTCTGTTGTTTGGGTGTCACTGTGGTTCAAAGTACCTGTGAGGCCTCTTGCAATAACCCATTTGTaGCTGGACATTACAGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: VISVVWVSLWFKVPVRPLAITHL*LDITES Trigger: TGACTCTGTAATGTCCAGTCACAAATGGGTTATTGC...AAGAGGCCTCACAGGTACTTTGAACCACAGTGACACCCAAACAACAGAGATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR CCA 90 bp | ACTAGTTTCTTTGAAACTTTAGCTGAAAGTACAGCAATGGTGTGGTATCCCACAGACATCCTTGGTCCATaGGAAAACAGCTGGAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: TSFFETLAESTAMVWYPTDILGP*ENSWSG Trigger: CCCACTCCAGCTGTTTTCCCATGGACCAAGGATGTC...TGTGGGATACCACACCATTGCTGTACTTTCAGCTAAAGTTTCAAAGAAACTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR CAA 90 bp | GGAAACTCTATTCTAAGATCTGACACCCTGTCCTTTTCTCTTCTCTaGCCCAGCTACTGGCTGATAAGCACTTTATTAACCAATGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: GNSILRSDTLSFSLL*PSYWLISTLLTNER Trigger: CCTCTCATTGGTTAATAAAGTGCTTATCAGCCAGTAGCTGGGCAAGAGAAGAGAAAAGGACAGGGTGTCAGATCTTAGAATAGAGTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCCCACTGCTTCTACCTTATCACGATGGACAGAACTTTCAGATGAGAGGGAAACCTTTCCACCTTTaGATTGCCCTTGTTATGTAT | + |
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Preference number: 2 (lower is better) Translates to: SLPLLLPYHDGQNFQMRGKPFHL*IALVMY Trigger: ATACATAACAAGGGCAATTCAAAGGTGGAAAGGTTT...CCCTCTCATCTGAAAGTTCTGTCCATCGTGATAAGGTAGAAGCAGTGGGAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGTTTTGCTACTGAGCAGTGTGTCAGTTCCTGAGACTATCAGAAATCTATGCGTGTTTCAGGAAGTTTaGATGAGTGATGAAGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: VVLLLSSVSVPETIRNLCVFQEV*MSDEGH Trigger: ATGGCCTTCATCACTCATTCAAACTTCCTGAAACAC...GCATAGATTTCTGATAGTCTCAGGAACTGACACACTGCTCAGTAGCAAAACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR GCA 90 bp | GTTATCTCTGTTGTTTGGGTGTCACTGTGGTTCAAAGTACCTGTGAGGCCTCTTTTTCAGGGTTTTCTTTaGCTCCTTTTCTCTCCCAAA | + |
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Preference number: 2 (lower is better) Translates to: VISVVWVSLWFKVPVRPLFQGFL*LLFSPK Trigger: TTTGGGAGAGAAAAGGAGGCAAAGAAAACCCTGAAA...AAGAGGCCTCACAGGTACTTTGAACCACAGTGACACCCAAACAACAGAGATAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR CCA 90 bp | GTTATCTCTGTTGTTTGGGTGTCACTGTGGTTCAAAGTACCTGTGAGGCCTCTTAACCCCAATAGTAGTTaGGCTACCAATGTTGAAATG | + |
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Preference number: 2 (lower is better) Translates to: VISVVWVSLWFKVPVRPLNPNSS*ATNVEM Trigger: CATTTCAACATTGGTAGCCCAACTACTATTGGGGTT...AAGAGGCCTCACAGGTACTTTGAACCACAGTGACACCCAAACAACAGAGATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR TCA 90 bp | GTTAAGGATAAGTCCAAAGAAACACTCACACAGGTAGACATGCAGAGACCTTCCTTTTTGACTGGGAACTaGATGTTACCACACAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: VKDKSKETLTQVDMQRPSFLTGN*MLPHSV Trigger: TACACTGTGTGGTAACATTCAGTTCCCAGTCAAAAA...GGAAGGTCTCTGCATGTCTACCTGTGTGAGTGTTTCTTTGGACTTATCCTTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGTTTTGCTACTGAGCAGTGTGTCAGTTCCTGAGACTATCAGAAATCTATGCTTCAGGAAGTTTGAATaGGTGATGAAGGCCATCTTT | + |
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Preference number: 2 (lower is better) Translates to: VVLLLSSVSVPETIRNLCFRKFE*VMKAIF Trigger: AAAGATGGCCTTCATCACTCATTCAAACTTCCTGAA...GCATAGATTTCTGATAGTCTCAGGAACTGACACACTGCTCAGTAGCAAAACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGTTTTGCTACTGAGCAGTGTGTCAGTTCCTGAGACTATCAGAAATCTATGCTTGGGCTACCAATGTTaGAATGGGAGTATCTTACTA | + |
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Preference number: 2 (lower is better) Translates to: VVLLLSSVSVPETIRNLCLGYQC*NGSILL Trigger: TAGTAAGATACTCCCATTTCAACATTGGTAGCCCAA...GCATAGATTTCTGATAGTCTCAGGAACTGACACACTGCTCAGTAGCAAAACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTATGGAAAGCTGCTTTTTCATGCCCAGACTCCATATAACTCCATTTCAGTGTGGTCATTGTTGAAGTaGACAGTGTTCTCAGATGGG | + |
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Preference number: 2 (lower is better) Translates to: SYGKLLFHAQTPYNSISVWSLLK*TVFSDG Trigger: CCCATCTGAGAACACTGTGCACTTCAACAATGACCA...CACTGAAATGGAGTTATATGGAGTCTGGGCATGAAAAAGCAGCTTTCCATAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR CCA 90 bp | ACTAGTTTCTTTGAAACTTTAGCTGAAAGTACAGCAATGGTGTGGTATCCCACAGGCAGTGTCAAGATCTaGATCACAAGCAATCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: TSFFETLAESTAMVWYPTGSVKI*ITSNLW Trigger: CCAGAGATTGCTTGTGATCCAGATCTTGACACTGCC...TGTGGGATACCACACCATTGCTGTACTTTCAGCTAAAGTTTCAAAGAAACTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR CCA 90 bp | AATTTTTCCATCCTGTTTTCCATGATGTCACCTGAACCTTTGGTGAAGCAAAGCCTGCTGGCACTAAGCTaGGTAGTTTCTGATCTATTG | + |
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Preference number: 2 (lower is better) Translates to: NFSILFSMMSPEPLVKQSLLALS*VVSDLL Trigger: CAATAGATCAGAAACTACCCAGCTTAGTGCCAGCAG...GCTTTGCTTCACCAAAGGTTCAGGTGACATCATGGAAAACAGGATGGAAAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGTTTTGCTACTGAGCAGTGTGTCAGTTCCTGAGACTATCAGAAATCTATGCAAACCTTTCCACCTTTaGATTGCCCTTGTTATGTAT | + |
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Preference number: 2 (lower is better) Translates to: VVLLLSSVSVPETIRNLCKPFHL*IALVMY Trigger: ATACATAACAAGGGCAATTCAAAGGTGGAAAGGTTT...GCATAGATTTCTGATAGTCTCAGGAACTGACACACTGCTCAGTAGCAAAACCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR TCA 90 bp | ACTAGTTTCTTTGAAACTTTAGCTGAAAGTACAGCAATGGTGTGGTATCCCACAGATGAAGGCCATCTTTaGATCTGGATGACACCATAC | + |
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Preference number: 2 (lower is better) Translates to: TSFFETLAESTAMVWYPTDEGHL*IWMTPY Trigger: GTATGGTGTCATCCAGATTCAAAGATGGCCTTCATC...TGTGGGATACCACACCATTGCTGTACTTTCAGCTAAAGTTTCAAAGAAACTAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTATGGAAAGCTGCTTTTTCATGCCCAGACTCCATATAACTCCATTTCAGTGTCAATCAGTGGGTCATaGCCATTGGAGAACACATAT | + |
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Preference number: 2 (lower is better) Translates to: SYGKLLFHAQTPYNSISVSISGS*PLENTY Trigger: ATATGTGTTCTCCAATGGTCATGACCCACTGATTGA...CACTGAAATGGAGTTATATGGAGTCTGGGCATGAAAAAGCAGCTTTCCATAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR GCA 90 bp | AAACATCTTGGTCAATATGAACTTGATTTCTCATGTCCCATCTCCAGTTTGTGCATTGTAGTCGATGTGTaGCCTTATGGCTGCTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: KHLGQYELDFSCPISSLCIVVDV*PYGCSF Trigger: GAAAGAGCAGCCATAAGGGCACACATCGACTACAAT...GCACAAACTGGAGATGGGACATGAGAAATCAAGTTCATATTGACCAAGATGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR CCA 90 bp | ACTATCAATTATGCATTTTATGGTGTGAACCTGTGCCACTTTGACCTTAAGATGCGATGTGTGCCCTTATaGCTGCTCTTTCATCATGAC | + |
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Preference number: 2 (lower is better) Translates to: TINYAFYGVNLCHFDLKMRCVPL*LLFHHD Trigger: GTCATGATGAAAGAGCAGCCATAAGGGCACACATCG...CATCTTAAGGTCAAAGTGGCACAGGTTCACACCATAAAATGCATAATTGATAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR CAA 90 bp | TGTGCTTTTGGTGACCAGCAAATCTTCAGATCAATTAGAATGTCTTaGCTGGGATTTTTATGCCTGTGTTATCTCTGTTGTTTGGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: CAFGDQQIFRSIRMS*LGFLCLCYLCCLGV Trigger: GACACCCAAACAACAGAGATAACACAGGCATAAAAATCCCAGCAAAGACATTCTAATTGATCTGAAGATTTGCTGGTCACCAAAAGCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTATGGAAAGCTGCTTTTTCATGCCCAGACTCCATATAACTCCATTTCAGTGTTCAGGAAGTTTGAATaGGTGATGAAGGCCATCTTT | + |
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Preference number: 2 (lower is better) Translates to: SYGKLLFHAQTPYNSISVFRKFE*VMKAIF Trigger: AAAGATGGCCTTCATCACTCATTCAAACTTCCTGAA...CACTGAAATGGAGTTATATGGAGTCTGGGCATGAAAAAGCAGCTTTCCATAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR GCA 90 bp | ACTAGTTTCTTTGAAACTTTAGCTGAAAGTACAGCAATGGTGTGGTATCCCACATATGGTGTGAACCTGTaGCACTTTGACCTTAAGATG | + |
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Preference number: 2 (lower is better) Translates to: TSFFETLAESTAMVWYPTYGVNL*HFDLKM Trigger: CATCTTAAGGTCAAAGTGGCACAGGTTCACACCATA...TGTGGGATACCACACCATTGCTGTACTTTCAGCTAAAGTTTCAAAGAAACTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR CAA 90 bp | TCTTTGAATTTTTCCATCCTGTTTTCCATGATGTCACCTGAACCTTaGGTGAAGCAAAGCAATAACCCATTTGTGACTGGACATTACAGA | + |
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Preference number: 2 (lower is better) Translates to: SLNFSILFSMMSPEP*VKQSNNPFVTGHYR Trigger: TCTGTAATGTCCAGTCACAAATGGGTTATTGCTTTGCTTCACCAAAGGTTCAGGTGACATCATGGAAAACAGGATGGAAAAATTCAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR TCA 90 bp | ACTAGTTTCTTTGAAACTTTAGCTGAAAGTACAGCAATGGTGTGGTATCCCACACAAAGAAAGGAGACCTaGGCACAGAAATTCATATCT | + |
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Preference number: 2 (lower is better) Translates to: TSFFETLAESTAMVWYPTQRKET*AQKFIS Trigger: AGATATGAATTTCTGTGCTCAGGTCTCCTTTCTTTG...TGTGGGATACCACACCATTGCTGTACTTTCAGCTAAAGTTTCAAAGAAACTAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR CCA 90 bp | AAACATCTTGGTCAATATGAACTTGATTTCTCATGTCCCATCTCCAGTTTGTGCTCTACCTTATCACGATaGACAGAACTTTCAGATGAG | + |
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Preference number: 2 (lower is better) Translates to: KHLGQYELDFSCPISSLCSTLSR*TELSDE Trigger: CTCATCTGAAAGTTCTGTCCATCGTGATAAGGTAGA...GCACAAACTGGAGATGGGACATGAGAAATCAAGTTCATATTGACCAAGATGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTATGGAAAGCTGCTTTTTCATGCCCAGACTCCATATAACTCCATTTCAGTGCAATTATGCATTTTATaGTGTGAACCTGTGCCACTT | + |
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Preference number: 2 (lower is better) Translates to: SYGKLLFHAQTPYNSISVQLCIL*CEPVPL Trigger: AAGTGGCACAGGTTCACACCATAAAATGCATAATTG...CACTGAAATGGAGTTATATGGAGTCTGGGCATGAAAAAGCAGCTTTCCATAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTATGGAAAGCTGCTTTTTCATGCCCAGACTCCATATAACTCCATTTCAGTGGAACAAATACTCAAGTaGAAGAACTCCACATATGAC | + |
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Preference number: 2 (lower is better) Translates to: SYGKLLFHAQTPYNSISVEQILK*KNSTYD Trigger: GTCATATGTGGAGTTCTTCCACTTGAGTATTTGTTC...CACTGAAATGGAGTTATATGGAGTCTGGGCATGAAAAAGCAGCTTTCCATAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR CCA 90 bp | AATTTTTCCATCCTGTTTTCCATGATGTCACCTGAACCTTTGGTGAAGCAAAGCTCGGTAGGAGAGTCTTaGTATAATGTTATAGTTGGT | + |
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Preference number: 2 (lower is better) Translates to: NFSILFSMMSPEPLVKQSSVGES*YNVIVG Trigger: ACCAACTATAACATTATACCAAGACTCTCCTACCGA...GCTTTGCTTCACCAAAGGTTCAGGTGACATCATGGAAAACAGGATGGAAAAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR TCA 90 bp | ACTATCAATTATGCATTTTATGGTGTGAACCTGTGCCACTTTGACCTTAAGATGCAAAGAAAGGAGACCTaGGCACAGAAATTCATATCT | + |
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Preference number: 2 (lower is better) Translates to: TINYAFYGVNLCHFDLKMQRKET*AQKFIS Trigger: AGATATGAATTTCTGTGCTCAGGTCTCCTTTCTTTG...CATCTTAAGGTCAAAGTGGCACAGGTTCACACCATAAAATGCATAATTGATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR CCA 90 bp | AAACATCTTGGTCAATATGAACTTGATTTCTCATGTCCCATCTCCAGTTTGTGCGAACAAATACTCAAGTaGAAGAACTCCACATATGAC | + |
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Preference number: 2 (lower is better) Translates to: KHLGQYELDFSCPISSLCEQILK*KNSTYD Trigger: GTCATATGTGGAGTTCTTCCACTTGAGTATTTGTTC...GCACAAACTGGAGATGGGACATGAGAAATCAAGTTCATATTGACCAAGATGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR-3UTR CCA 90 bp | AAACATCTTGGTCAATATGAACTTGATTTCTCATGTCCCATCTCCAGTTTGTGCTCGGTAGGAGAGTCTTaGTATAATGTTATAGTTGGT | + |
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Preference number: 2 (lower is better) Translates to: KHLGQYELDFSCPISSLCSVGES*YNVIVG Trigger: ACCAACTATAACATTATACCAAGACTCTCCTACCGA...GCACAAACTGGAGATGGGACATGAGAAATCAAGTTCATATTGACCAAGATGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR CAA 90 bp | TGGACAGAACTTTCAGATGAGAGGGTGAAAGAAACCTTTCCACCTTaGAATTGCCCTTGTTATGTATTTTGTCAAAGGAACAAGAAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: WTELSDERVKETFPP*NCPCYVFCQRNKKN Trigger: ATTTTTCTTGTTCCTTTGACAAAATACATAACAAGGGCAATTCAAAGGTGGAAAGGTTTCTTTCACCCTCTCATCTGAAAGTTCTGTCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR-3UTR GCA 90 bp | AAACATCTTGGTCAATATGAACTTGATTTCTCATGTCCCATCTCCAGTTTGTGCCCTCACTATCAATTATaGATTTTATGGTGTGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: KHLGQYELDFSCPISSLCPHYQL*ILWCEP Trigger: AGGTTCACACCATAAAATGCATAATTGATAGTGAGG...GCACAAACTGGAGATGGGACATGAGAAATCAAGTTCATATTGACCAAGATGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTAGTTTCTTTGAAACTTTAGCTGAAAGTACAGCAATGGTGTGGTATCCCACACTACCAATGTTGAAATaGGAGTATCTTACTAAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: TSFFETLAESTAMVWYPTLPMLK*EYLTKV Trigger: CACTTTAGTAAGATACTCCCATTTCAACATTGGTAG...TGTGGGATACCACACCATTGCTGTACTTTCAGCTAAAGTTTCAAAGAAACTAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTGTGTTATCTCTGTTGTTTGGGTGTCACTGTGGTTCAAAGTACCTGTGAGTGGGAAAGGGTAGAGTaGTGGGTGGTTTGGAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CLCYLCCLGVTVVQSTCEWERVE*WVVWRA Trigger: AGCCCTCCAAACCACCCACAACTCTACCCTTTCCCA...CTCACAGGTACTTTGAACCACAGTGACACCCAAACAACAGAGATAACACAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR GCA 72 bp | ACCCTCCAATGGCAGGTGAGGTGTGAAGTCAAAGGCTaGCTCCATTTAGAGCATGTTATGTATGGGCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: TLQWQVRCEVKG*LHLEHVMYGLT Trigger: TGTGAGCCCATACATAACATGCTCTAAATGGAGGCAGCCTTTGACTTCACACCTCACCTGCCATTGGAGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR GCA 72 bp | TTACTTGCCATCTCCTCAGTCATTGTAGTCGATGTGTaGCCTTATGGCTGCTCTTTCATCATGACCTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: LLAISSVIVVDV*PYGCSFIMTSW Trigger: CCATGAGGTCATGATGAAAGAGCAGCCATAAGGGCACACATCGACTACAATGACTGAGGAGATGGCAAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR TCA 72 bp | TATATTGTTTCTGATTCCCTCTCTGGTGATCTGACCTaGAGGGCCTGTGCTTTTGGTGACCAGCAAATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: YIVSDSLSGDLT*RACAFGDQQIF Trigger: GAAGATTTGCTGGTCACCAAAAGCACAGGCCCTTCAGGTCAGATCACCAGAGAGGGAATCAGAAACAATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR TCA 72 bp | ATCTCTATATTGTTTCTGATTCCCTCTCTGGTGATCTaGCCTGAAGGGCCTGTGCTTTTGGTGACCAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: ISILFLIPSLVI*PEGPVLLVTSK Trigger: TTTGCTGGTCACCAAAAGCACAGGCCCTTCAGGTCAGATCACCAGAGAGGGAATCAGAAACAATATAGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR CCA 72 bp | TATGCCTGTGTTATCTCTGTTGTTTGGGTGTCACTGTaGTTCAAAGTACCTGTGAGGCCTCTTGGGTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: YACVISVVWVSL*FKVPVRPLGFL Trigger: TAGAAACCCAAGAGGCCTCACAGGTACTTTGAACCACAGTGACACCCAAACAACAGAGATAACACAGGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR GCA 72 bp | ATGTTACCACACAGTGTATGTTCCTCTTTCCACAAATaGATCTCTCCCACTGCTTCTACCTTATCACGATGG | + |
|
Preference number: 3 (lower is better) Translates to: MLPHSVCSSFHK*ISPTASTLSRW Trigger: CCATCGTGATAAGGTAGAAGCAGTGGGAGAGATGCATTTGTGGAAAGAGGAACATACACTGTGTGGTAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR GCA 72 bp | ATCAGTATAGAGCAATCCTCAAATCCAAGCAGAAAGTaGCTGGTAACCCCAATAGTAGTTGGGCTACCAATG | + |
|
Preference number: 3 (lower is better) Translates to: ISIEQSSNPSRK*LVTPIVVGLPM Trigger: CATTGGTAGCCCAACTACTATTGGGGTTACCAGGCACTTTCTGCTTGGATTTGAGGATTGCTCTATACTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR CCA 72 bp | AAATGCATCTCTCCCACTGCTTCTACCTTATCACGATaGACAGAACTTTCAGATGAGAGGGTGAAAGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: KCISPTASTLSR*TELSDERVKET Trigger: GGTTTCTTTCACCCTCTCATCTGAAAGTTCTGTCCATCGTGATAAGGTAGAAGCAGTGGGAGAGATGCATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTTTTCCATCCTGTTTTCCATGATGTCACCTGAACCTTTGGTGAAGCAAAGCTCCTTTTCTCTTCTCTaGCCCAGCTACTGGCTGATA | + |
|
Preference number: 3 (lower is better) Translates to: NFSILFSMMSPEPLVKQSSFSLL*PSYWLI Trigger: TATCAGCCAGTAGCTGGGCAAGAGAAGAGAAAAGGA...GCTTTGCTTCACCAAAGGTTCAGGTGACATCATGGAAAACAGGATGGAAAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTGTGTTATCTCTGTTGTTTGGGTGTCACTGTGGTTCAAAGTACCTGTGAGTCTCATGCTAGAATGTaGACTAGCCTAAAAGTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: CLCYLCCLGVTVVQSTCESHARM*TSLKVS Trigger: ACTGACTTTTAGGCTAGTCAACATTCTAGCATGAGA...CTCACAGGTACTTTGAACCACAGTGACACCCAAACAACAGAGATAACACAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTAGTTTCTTTGAAACTTTAGCTGAAAGTACAGCAATGGTGTGGTATCCCACAGAAGGGCCTGTGCTTTaGGTGACCAGCAAATCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: TSFFETLAESTAMVWYPTEGPVL*VTSKSS Trigger: TGAAGATTTGCTGGTCACCAAAAGCACAGGCCCTTC...TGTGGGATACCACACCATTGCTGTACTTTCAGCTAAAGTTTCAAAGAAACTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR TCA 72 bp | GATCACAAGCAATCTCTGGGCATAGCAATCAGCATCTaGATACACTGTACACAAAAAGCATCCCCACTATGT | + |
|
Preference number: 3 (lower is better) Translates to: DHKQSLGIAISI*IHCTQKASPLC Trigger: ACATAGTGGGGATGCTTTTTGTGTACAGTGTATTCAGATGCTGATTGCTATGCCCAGAGATTGCTTGTGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR GCA 72 bp | TGTATGTTCCTCTTTCCACAAATGCATCTCTCCCACTaGTTCTACCTTATCACGATGGACAGAACTTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: CMFLFPQMHLSH*FYLITMDRTFR Trigger: TCTGAAAGTTCTGTCCATCGTGATAAGGTAGAAGCAGTGGGAGAGATGCATTTGTGGAAAGAGGAACATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTGTGTTATCTCTGTTGTTTGGGTGTCACTGTGGTTCAAAGTACCTGTGAGCACTCATCTGGTTCTTaGAATTTTTCCATCCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: CLCYLCCLGVTVVQSTCEHSSGS*NFSILF Trigger: AAACAGGATGGAAAAATTCAAAGAACCAGATGAGTG...CTCACAGGTACTTTGAACCACAGTGACACCCAAACAACAGAGATAACACAGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTATCTCTGTTGTTTGGGTGTCACTGTGGTTCAAAGTACCTGTGAGGCCTCTTCACTCATCTGGTTCTTaGAATTTTTCCATCCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VISVVWVSLWFKVPVRPLHSSGS*NFSILF Trigger: AAACAGGATGGAAAAATTCAAAGAACCAGATGAGTG...AAGAGGCCTCACAGGTACTTTGAACCACAGTGACACCCAAACAACAGAGATAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTAGTTTCTTTGAAACTTTAGCTGAAAGTACAGCAATGGTGTGGTATCCCACACCTGTGTTATCTCTGTaGTTTGGGTGTCACTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TSFFETLAESTAMVWYPTPVLSL*FGCHCG Trigger: ACCACAGTGACACCCAAACAACAGAGATAACACAGG...TGTGGGATACCACACCATTGCTGTACTTTCAGCTAAAGTTTCAAAGAAACTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR TCA 72 bp | TGCTTCTACCTTATCACGATGGACAGAACTTTCAGATaGGAGGGTGAAAGAAACCTTTCCACCTTTGAATTG | + |
|
Preference number: 3 (lower is better) Translates to: CFYLITMDRTFR*EGERNLSTFEL Trigger: CAATTCAAAGGTGGAAAGGTTTCTTTCACCCTCTCATCTGAAAGTTCTGTCCATCGTGATAAGGTAGAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTAGTTTCTTTGAAACTTTAGCTGAAAGTACAGCAATGGTGTGGTATCCCACACAAATGCACAGTTACTaGCCATCTCCTCAGTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: TSFFETLAESTAMVWYPTQMHSY*PSPQSL Trigger: CAATGACTGAGGAGATGGCAAGTAACTGTGCATTTG...TGTGGGATACCACACCATTGCTGTACTTTCAGCTAAAGTTTCAAAGAAACTAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTAGTTTCTTTGAAACTTTAGCTGAAAGTACAGCAATGGTGTGGTATCCCACACTAAAGTGGTCATTGTaGAAGTGCACAGTGTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TSFFETLAESTAMVWYPTLKWSL*KCTVFS Trigger: TGAGAACACTGTGCACTTCAACAATGACCACTTTAG...TGTGGGATACCACACCATTGCTGTACTTTCAGCTAAAGTTTCAAAGAAACTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTATGGAAAGCTGCTTTTTCATGCCCAGACTCCATATAACTCCATTTCAGTGTCTCATGCTAGAATGTaGACTAGCCTAAAAGTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SYGKLLFHAQTPYNSISVSHARM*TSLKVS Trigger: ACTGACTTTTAGGCTAGTCAACATTCTAGCATGAGA...CACTGAAATGGAGTTATATGGAGTCTGGGCATGAAAAAGCAGCTTTCCATAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR CCA 72 bp | GTAACCCCAATAGTAGTTGGGCTACCAATGTTGAAATaGGAGTATCTTACTAAAGTGGTCATTGTTGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VTPIVVGLPMLK*EYLTKVVIVEV Trigger: CACTTCAACAATGACCACTTTAGTAAGATACTCCCATTTCAACATTGGTAGCCCAACTACTATTGGGGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTTTTCCATCCTGTTTTCCATGATGTCACCTGAACCTTTGGTGAAGCAAAGCCTTTCCACCTTTGAATaGCCCTTGTTATGTATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: NFSILFSMMSPEPLVKQSLSTFE*PLLCIL Trigger: CAAAATACATAACAAGGGCAATTCAAAGGTGGAAAG...GCTTTGCTTCACCAAAGGTTCAGGTGACATCATGGAAAACAGGATGGAAAAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR GCA 72 bp | TTCAGATCAATTAGAATGTCTTTGCTGGGATTTTTATaGCTGTGTTATCTCTGTTGTTTGGGTGTCACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FRSIRMSLLGFL*LCYLCCLGVTV Trigger: CACAGTGACACCCAAACAACAGAGATAACACAGGCATAAAAATCCCAGCAAAGACATTCTAATTGATCTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACATCTTGGTCAATATGAACTTGATTTCTCATGTCCCATCTCCAGTTTGTGCCTTTCCACCTTTGAATaGCCCTTGTTATGTATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: KHLGQYELDFSCPISSLCLSTFE*PLLCIL Trigger: CAAAATACATAACAAGGGCAATTCAAAGGTGGAAAG...GCACAAACTGGAGATGGGACATGAGAAATCAAGTTCATATTGACCAAGATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR CAA 72 bp | TGGGTGGTTTGGAGGGCTGTGATCCCTAGGACATCCTaGGTCCATGGGAAAACAGCTGGAGTGGGGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: WVVWRAVIPRTS*VHGKTAGVGCR Trigger: TCTACACCCCACTCCAGCTGTTTTCCCATGGACCAAGGATGTCCTAGGGATCACAGCCCTCCAAACCACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| CDS-3UTR TCA 90 bp | TCTTATGGAAAGCTGCTTTTTCATGCCCAGACTCCATATAACTCCATTTCAGTGGGTGCACAAGCCAACTaGCTGAGCAGGAGGGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: SYGKLLFHAQTPYNSISVGAQAN*LSRRDQ Trigger: TTGGTCCCTCCTGCTCAGTCAGTTGGCTTGTGCACC...CACTGAAATGGAGTTATATGGAGTCTGGGCATGAAAAAGCAGCTTTCCATAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| CDS-3UTR TCA 90 bp | AATTTTTCCATCCTGTTTTCCATGATGTCACCTGAACCTTTGGTGAAGCAAAGCGGTGCACAAGCCAACTaGCTGAGCAGGAGGGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: NFSILFSMMSPEPLVKQSGAQAN*LSRRDQ Trigger: TTGGTCCCTCCTGCTCAGTCAGTTGGCTTGTGCACC...GCTTTGCTTCACCAAAGGTTCAGGTGACATCATGGAAAACAGGATGGAAAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| CDS-3UTR CCA 90 bp | GTTATCTCTGTTGTTTGGGTGTCACTGTGGTTCAAAGTACCTGTGAGGCCTCTTAGGATGAGGATAGTTTaGGTGGCTCTGTCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VISVVWVSLWFKVPVRPLRMRIV*VALSSG Trigger: ACCTGAAGACAGAGCCACCCAAACTATCCTCATCCT...AAGAGGCCTCACAGGTACTTTGAACCACAGTGACACCCAAACAACAGAGATAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTCCCACTGCTTCTACCTTATCACGATGGACAGAACTTTCAGATGAGAGGGCACTGTGGATATGCTTaGCTTGTCTCTTATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLPLLLPYHDGQNFQMRGHCGYA*LVSYVC Trigger: ACAGACATAAGAGACAAGTCAAGCATATCCACAGTG...CCCTCTCATCTGAAAGTTCTGTCCATCGTGATAAGGTAGAAGCAGTGGGAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| CDS-3UTR CCA 90 bp | GTTAAGGATAAGTCCAAAGAAACACTCACACAGGTAGACATGCAGAGACCTTCCAGGATGAGGATAGTTTaGGTGGCTCTGTCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VKDKSKETLTQVDMQRPSRMRIV*VALSSG Trigger: ACCTGAAGACAGAGCCACCCAAACTATCCTCATCCT...GGAAGGTCTCTGCATGTCTACCTGTGTGAGTGTTTCTTTGGACTTATCCTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR CAA 72 bp | TTGCTGGGATTTTTATGCCTGTGTTATCTCTGTTGTTaGGGTGTCACTGTGGTTCAAAGTACCTGTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLGFLCLCYLCC*GVTVVQSTCEA Trigger: GGCCTCACAGGTACTTTGAACCACAGTGACACCCAAACAACAGAGATAACACAGGCATAAAAATCCCAGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| CDS-3UTR GCA 90 bp | GTTAAGGATAAGTCCAAAGAAACACTCACACAGGTAGACATGCAGAGACCTTCCATGTTTAGAAGCAGGTaGACAAGCCAACTGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VKDKSKETLTQVDMQRPSMFRSR*TSQLTE Trigger: CTCAGTCAGTTGGCTTGTGCACCTGCTTCTAAACAT...GGAAGGTCTCTGCATGTCTACCTGTGTGAGTGTTTCTTTGGACTTATCCTTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| CDS-3UTR CCA 90 bp | GTTATCTCTGTTGTTTGGGTGTCACTGTGGTTCAAAGTACCTGTGAGGCCTCTTCTGATGGTGATTGCTTaGAAACAACTCAATAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VISVVWVSLWFKVPVRPLLMVIA*KQLNRH Trigger: GTGCCTATTGAGTTGTTTCCAAGCAATCACCATCAG...AAGAGGCCTCACAGGTACTTTGAACCACAGTGACACCCAAACAACAGAGATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| CDS-3UTR GCA 90 bp | GAACTTTCAGATGAGAGGGTGAAAGAAACCTTTCCACCTTTGAATTGCCCTTGTATGTTTAGAAGCAGGTaGACAAGCCAACTGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ELSDERVKETFPPLNCPCMFRSR*TSQLTE Trigger: CTCAGTCAGTTGGCTTGTGCACCTGCTTCTAAACAT...ACAAGGGCAATTCAAAGGTGGAAAGGTTTCTTTCACCCTCTCATCTGAAAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTGTGTTATCTCTGTTGTTTGGGTGTCACTGTGGTTCAAAGTACCTGTGAGATTCCCACTGTAATCTaGCAGAAGAGAAAAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLCYLCCLGVTVVQSTCEIPTVI*QKRKVS Trigger: AGAAACTTTTCTCTTCTGCCAGATTACAGTGGGAAT...CTCACAGGTACTTTGAACCACAGTGACACCCAAACAACAGAGATAACACAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTCCCACTGCTTCTACCTTATCACGATGGACAGAACTTTCAGATGAGAGGGCATTTTTCTTGTAATTaGTGCCTGATTCTCTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLPLLLPYHDGQNFQMRGHFSCN*CLILLV Trigger: CACTAAGAGAATCAGGCACCAATTACAAGAAAAATG...CCCTCTCATCTGAAAGTTCTGTCCATCGTGATAAGGTAGAAGCAGTGGGAGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR CAA 72 bp | TTTTCCATCCTGTTTTCCATGATGTCACCTGAACCTTaGGTGAAGCAAAGCAATAACCCATTTGTGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSILFSMMSPEP*VKQSNNPFVTG Trigger: TCCAGTCACAAATGGGTTATTGCTTTGCTTCACCAAAGGTTCAGGTGACATCATGGAAAACAGGATGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR CAA 72 bp | ATGGGCTCACAGTACTGTGGAGAACTAAGCTTAGCTTaGTGTTTTGGCTTAGCAACTTTCCTTGGAACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MGSQYCGELSLA*CFGLATFLGTF Trigger: AAAAGTTCCAAGGAAAGTTGCTAAGCCAAAACACAAAGCTAAGCTTAGTTCTCCACAGTACTGTGAGCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| CDS-3UTR TCA 90 bp | AATTTTTCCATCCTGTTTTCCATGATGTCACCTGAACCTTTGGTGAAGCAAAGCCACTGTGGATATGCTTaGCTTGTCTCTTATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NFSILFSMMSPEPLVKQSHCGYA*LVSYVC Trigger: ACAGACATAAGAGACAAGTCAAGCATATCCACAGTG...GCTTTGCTTCACCAAAGGTTCAGGTGACATCATGGAAAACAGGATGGAAAAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| CDS-3UTR CCA 90 bp | TCTTATGGAAAGCTGCTTTTTCATGCCCAGACTCCATATAACTCCATTTCAGTGCTGATGGTGATTGCTTaGAAACAACTCAATAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SYGKLLFHAQTPYNSISVLMVIA*KQLNRH Trigger: GTGCCTATTGAGTTGTTTCCAAGCAATCACCATCAG...CACTGAAATGGAGTTATATGGAGTCTGGGCATGAAAAAGCAGCTTTCCATAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTTTTGCTACTGAGCAGTGTGTCAGTTCCTGAGACTATCAGAAATCTATGCCATTTTTCTTGTAATTaGTGCCTGATTCTCTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VVLLLSSVSVPETIRNLCHFSCN*CLILLV Trigger: CACTAAGAGAATCAGGCACCAATTACAAGAAAAATG...GCATAGATTTCTGATAGTCTCAGGAACTGACACACTGCTCAGTAGCAAAACCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
||
| 3UTR CAA 72 bp | CTTTCAGATGAGAGGGTGAAAGAAACCTTTCCACCTTaGAATTGCCCTTGTTATGTATTTTGTCAAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LSDERVKETFPP*NCPCYVFCQRN Trigger: GTTCCTTTGACAAAATACATAACAAGGGCAATTCAAAGGTGGAAAGGTTTCTTTCACCCTCTCATCTGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| 3UTR CAA 72 bp | GAACTTTTAGAAGACATGACAGCAGTTCCTTTAGCTTaGGAACTGTCATGGAGTCTATCAAAGAAAATAAAC | + |
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Preference number: 4 (lower is better) Translates to: ELLEDMTAVPLA*ELSWSLSKKIN Trigger: GTTTATTTTCTTTGATAGACTCCATGACAGTTCCAAAGCTAAAGGAACTGCTGTCATGTCTTCTAAAAGTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| CDS-3UTR CAA 90 bp | AAACATCTTGGTCAATATGAACTTGATTTCTCATGTCCCATCTCCAGTTTGTGCATCCACCTGGAGTTATaGGGACTGATGGTGATTGCT | + |
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Preference number: 5 (lower is better) Translates to: KHLGQYELDFSCPISSLCIHLEL*GLMVIA Trigger: AGCAATCACCATCAGTCCCAATAACTCCAGGTGGAT...GCACAAACTGGAGATGGGACATGAGAAATCAAGTTCATATTGACCAAGATGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| CDS GCA 72 bp | GATTCTCTTAGTGGAGTCAAGATGTTTAGAAGCAGGTaGACAAGCCAACTGACTGAGCAGGAGGGACCAATG | + |
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Preference number: 6 (lower is better) Translates to: DSLSGVKMFRSR*TSQLTEQEGPM Trigger: CATTGGTCCCTCCTGCTCAGTCAGTTGGCTTGTGCACCTGCTTCTAAACATCTTGACTCCACTAAGAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062811.6 ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| CDS CAA 90 bp | AGCAGGTGCACAAGCCAACTGACTGAGCAGGAGGGACCAATGTACTaGGTTGCTCTGTATTTAAGCTTTATCCACCTGGAGTTATTGGGA | + |
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Preference number: 6 (lower is better) Translates to: SRCTSQLTEQEGPMY*VALYLSFIHLELLG Trigger: TCCCAATAACTCCAGGTGGATAAAGCTTAAATACAGAGCAACCAAGTACATTGGTCCCTCCTGCTCAGTCAGTTGGCTTGTGCACCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062811.6 ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| CDS CAA 72 bp | AAGCATGGTAAAAACAGATTGGAACTAGATCTCATATaGGTGATGAGAACAAAGGGACAAAACATGGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: KHGKNRLELDLI*VMRTKGQNMGK Trigger: CTTTCCCATGTTTTGTCCCTTTGTTCTCATCACCAATATGAGATCTAGTTCCAATCTGTTTTTACCATGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062811.6 ENSMUST00000226953.2 ENSMUST00000227530.2 |
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| CDS CAA 90 bp | CTCTTACCTAAGCATGGTAAAAACAGATTGGAACTAGATCTCATATaGGTGATGAGAACAAAGGGACAAAACATGGGAAAGAATATTTCT | + |
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Preference number: 6 (lower is better) Translates to: LLPKHGKNRLELDLI*VMRTKGQNMGKNIS Trigger: AGAAATATTCTTTCCCATGTTTTGTCCCTTTGTTCTCATCACCAATATGAGATCTAGTTCCAATCTGTTTTTACCATGCTTAGGTAAGAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062811.6 ENSMUST00000226953.2 ENSMUST00000227530.2 |
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