Pregenerated sensors for VMN1R78 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061602Ensembl transcript IDs: ENSMUST00000078039.3, ENSMUST00000228244.2, ENSMUST00000228664.2
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTAAACCTTTGCAGCTTCTGCTTTACCTACAAGTCATTGTCACTTaGCTGAGCACTAGAGGAGTGAAAGATGGCCTTTTCAGAGTTCAC | + |
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Preference number: 1 (lower is better) Translates to: PKPLQLLLYLQVIVT*LSTRGVKDGLFRVH Trigger: GTGAACTCTGAAAAGGCCATCTTTCACTCCTCTAGTGCTCAGCCAAGTGACAATGACTTGTAGGTAAAGCAGAAGCTGCAAAGGTTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR TCA 90 bp | CACTCAACAGTCAGACCCTCCATGAATCTCCATGTTTCTCTCCGTTaGTTCCCACTTCTCTACCATGGCAAATTTATCTTTGCAATGTCC | + |
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Preference number: 1 (lower is better) Translates to: HSTVRPSMNLHVSLR*FPLLYHGKFIFAMS Trigger: GGACATTGCAAAGATAAATTTGCCATGGTAGAGAAGTGGGAATCAACGGAGAGAAACATGGAGATTCATGGAGGGTCTGACTGTTGAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR CCA 90 bp | GATTTTGCAAAGGAACTGAGTTCTGTTCCCAGCAAGTACACCAGGTaGCTCACAACTGCATATAACTCCAGTTCCATAGGATTCAACATG | + |
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Preference number: 1 (lower is better) Translates to: DFAKELSSVPSKYTR*LTTAYNSSSIGFNM Trigger: CATGTTGAATCCTATGGAACTGGAGTTATATGCAGTTGTGAGCCACCTGGTGTACTTGCTGGGAACAGAACTCAGTTCCTTTGCAAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR TCA 90 bp | ACCCCAGTTTCTGCCTTCCATGTAATGGGACCAATGCAAATGTTTTaGACCATATTTGTAAGTGTACACAGATGTTCCAACTCAGTCTTC | + |
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Preference number: 1 (lower is better) Translates to: TPVSAFHVMGPMQMF*TIFVSVHRCSNSVF Trigger: GAAGACTGAGTTGGAACATCTGTGTACACTTACAAATATGGTTCAAAACATTTGCATTGGTCCCATTACATGGAAGGCAGAAACTGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR TCA 90 bp | TGCTCCTGTACCCCATTCCACTTCAAAGAAGATGATGAACATCAATaGCCTCCATGTTGCTTCAATTATTGCAAGCTAGCAATTGGACAA | + |
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Preference number: 1 (lower is better) Translates to: CSCTPFHFKEDDEHQ*PPCCFNYCKLAIGQ Trigger: TTGTCCAATTGCTAGCTTGCAATAATTGAAGCAACATGGAGGTCATTGATGTTCATCATCTTCTTTGAAGTGGAATGGGGTACAGGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR TCA 90 bp | TCTATAACTCCAGTTCTAGTGGGTTTAAGGCTATCTTCTGCTCTCTaGAGGAATATTATGCATGTGGTGTACAGACATACATGCAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: SITPVLVGLRLSSAL*RNIMHVVYRHTCRK Trigger: TTTCCTGCATGTATGTCTGTACACCACATGCATAATATTCCTTCAGAGAGCAGAAGATAGCCTTAAACCCACTAGAACTGGAGTTATAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR GCA 90 bp | ACAAAATATCTGTCAGATATACTAGGCCAGAAGGCTGAAGATGGGTaGTCCATTGTTATAAAAACAATATTTGGGACTGTCCAGGCATTC | + |
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Preference number: 1 (lower is better) Translates to: TKYLSDILGQKAEDG*SIVIKTIFGTVQAF Trigger: GAATGCCTGGACAGTCCCAAATATTGTTTTTATAACAATGGAGCACCCATCTTCAGCCTTCTGGCCTAGTATATCTGACAGATATTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR CCA 90 bp | CCAACACCTATATGGTGCATATGTACACAATTAGAAATGTTAGTGTaGCAGAAATGTCCCAGGCAGATATATAAATATCCCCCTGCCTTT | + |
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Preference number: 1 (lower is better) Translates to: PTPIWCICTQLEMLV*QKCPRQIYKYPPAF Trigger: AAAGGCAGGGGGATATTTATATATCTGCCTGGGACATTTCTGCCACACTAACATTTCTAATTGTGTACATATGCACCATATAGGTGTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR TCA 90 bp | GTAAACGCCGCAGAATTGGGTGCAAAGTTAATTGCAACTTCTTATTaGGTTGTGGAGCATGCCAATCTAAAAGACACACTTTTGCAAAAA | + |
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Preference number: 1 (lower is better) Translates to: VNAAELGAKLIATSY*VVEHANLKDTLLQK Trigger: TTTTTGCAAAAGTGTGTCTTTTAGATTGGCATGCTCCACAACTCAATAAGAAGTTGCAATTAACTTTGCACCCAATTCTGCGGCGTTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR GCA 90 bp | CTGAGAACACTGATAGCTCTTCTAGAATACCCAGGTTTTATTTCCTaGACTAAATGTTGGCACACAAATGTCTATAACTCCAGTTCTAGT | + |
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Preference number: 1 (lower is better) Translates to: LRTLIALLEYPGFIS*TKCWHTNVYNSSSS Trigger: ACTAGAACTGGAGTTATAGACATTTGTGTGCCAACATTTAGTGCAGGAAATAAAACCTGGGTATTCTAGAAGAGCTATCAGTGTTCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR TCA 90 bp | AACAGTAAGTTGATCCCTCATAAGAATGTCACTAAAGTCAGATGTTaGAGGTCTCCCCACCAAATTCCATGTTATATATGTTACAATCAA | + |
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Preference number: 1 (lower is better) Translates to: NSKLIPHKNVTKVRC*RSPHQIPCYICYNQ Trigger: TTGATTGTAACATATATAACATGGAATTTGGTGGGGAGACCTTCAACATCTGACTTTAGTGACATTCTTATGAGGGATCAACTTACTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGAATGCTGTACTGGGGGTAAACGCCGCAGAATTGGGTGCAAAGTTAATTGCGTAGGCATCAGGCAATaGACATGGTGCATATACATG | + |
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Preference number: 2 (lower is better) Translates to: LECCTGGKRRRIGCKVNCVGIRQ*TWCIYM Trigger: CATGTATATGCACCATGTGCATTGCCTGATGCCTAC...GCAATTAACTTTGCACCCAATTCTGCGGCGTTTACCCCCAGTACAGCATTCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGAATGCTGTACTGGGGGTAAACGCCGCAGAATTGGGTGCAAAGTTAATTGCATTTTGCAAAGGAACTaGGTTCTGTTCCCAGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: LECCTGGKRRRIGCKVNCILQRN*VLFPAS Trigger: ACTTGCTGGGAACAGAACTCAGTTCCTTTGCAAAAT...GCAATTAACTTTGCACCCAATTCTGCGGCGTTTACCCCCAGTACAGCATTCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR GCA 90 bp | CCGTGGATAGGAAGTCACTGTGGTAAAAGGGGACAGTACCATACTGGAAGAAATTCAACATGCTCTTCTTaGAGCTGTAGGCATCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: PWIGSHCGKRGQYHTGRNSTCSS*SCRHQA Trigger: TGCCTGATGCCTACAGCTGCAAGAAGAGCATGTTGA...ATTTCTTCCAGTATGGTACTGTCCCCTTTTACCACAGTGACTTCCTATCCACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAATGCTGTACTGGGGGTAAACGCCGCAGAATTGGGTGCAAAGTTAATTGCAACTAAAGTCAGATGTTaGAGGTCTCCCCACCAAATT | + |
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Preference number: 2 (lower is better) Translates to: WNAVLGVNAAELGAKLIATKVRC*RSPHQI Trigger: AATTTGGTGGGGAGACCTTCAACATCTGACTTTAGT...TGCAATTAACTTTGCACCCAATTCTGCGGCGTTTACCCCCAGTACAGCATTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR CAA 90 bp | CAGATGTTCCAACTCAGTCTTCCTGATTACAATGTGAGTACATCCTaGACTAGGCCATCACCCATACCTACGGCATCTCTTCTAGATTGT | + |
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Preference number: 2 (lower is better) Translates to: QMFQLSLPDYNVSTS*TRPSPIPTASLLDC Trigger: ACAATCTAGAAGAGATGCCGTAGGTATGGGTGATGGCCTAGTCAAGGATGTACTCACATTGTAATCAGGAAGACTGAGTTGGAACATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAATGCTGTACTGGGGGTAAACGCCGCAGAATTGGGTGCAAAGTTAATTGCAGATCAGGTACCTGAATaGAACAAACCTCTAAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: WNAVLGVNAAELGAKLIADQVPE*NKPLSV Trigger: TACACTTAGAGGTTTGTTTCATTCAGGTACCTGATC...TGCAATTAACTTTGCACCCAATTCTGCGGCGTTTACCCCCAGTACAGCATTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR CCA 90 bp | CCGTGGATAGGAAGTCACTGTGGTAAAAGGGGACAGTACCATACTGGAAGAAATCCATTTTACTCTCTCTaGGGTTCTTTTGACCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: PWIGSHCGKRGQYHTGRNPFYSL*GSFDLS Trigger: ACTGAGGTCAAAAGAACCCCAGAGAGAGTAAAATGG...ATTTCTTCCAGTATGGTACTGTCCCCTTTTACCACAGTGACTTCCTATCCACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR TCA 90 bp | CCGTGGATAGGAAGTCACTGTGGTAAAAGGGGACAGTACCATACTGGAAGAAATATTGCAACTTCTTATTaGGTTGTGGAGCATGCCAAT | + |
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Preference number: 2 (lower is better) Translates to: PWIGSHCGKRGQYHTGRNIATSY*VVEHAN Trigger: ATTGGCATGCTCCACAACTCAATAAGAAGTTGCAAT...ATTTCTTCCAGTATGGTACTGTCCCCTTTTACCACAGTGACTTCCTATCCACGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGTGAACAAGGTCACTGTGTTGGTATTCATTCCTGTGGATTATATTCTGCATAACAGAAAGGATGCATaGAGTAGTGAGGCAGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: SVNKVTVLVFIPVDYILHNRKDA*SSEAAL Trigger: CAGGGCTGCCTCACTACTTCATGCATCCTTTCTGTT...ATGCAGAATATAATCCACAGGAATGAATACCAACACAGTGACCTTGTTCACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGAGGGGGTTACTCCCAGGGATaGGAAAATCTGCACATAGAC | + |
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Preference number: 2 (lower is better) Translates to: LDKENVHGSAINKSVQRGGYSQG*ENLHID Trigger: GTCTATGTGCAGATTTTCTCATCCCTGGGAGTAACC...CCCTCTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR GCA 90 bp | ACACAGAGCTTACTATGCATATCCTACCTAAATCACACATTGCGTCACATAACCTCAACATGCTCTTCTTaGAGCTGTAGGCATCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: TQSLLCISYLNHTLRHITSTCSS*SCRHQA Trigger: TGCCTGATGCCTACAGCTGCAAGAAGAGCATGTTGA...GGTTATGTGACGCAATGTGTGATTTAGGTAGGATATGCATAGTAAGCTCTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAATGCTGTACTGGGGGTAAACGCCGCAGAATTGGGTGCAAAGTTAATTGCATCCTGCACTAAATGTTaGCACACAAATGTCTATAAC | + |
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Preference number: 2 (lower is better) Translates to: WNAVLGVNAAELGAKLIASCTKC*HTNVYN Trigger: GTTATAGACATTTGTGTGCCAACATTTAGTGCAGGA...TGCAATTAACTTTGCACCCAATTCTGCGGCGTTTACCCCCAGTACAGCATTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR CCA 90 bp | CCGTGGATAGGAAGTCACTGTGGTAAAAGGGGACAGTACCATACTGGAAGAAATACAAGGTCACTGTGTTaGTATTCATTCCTGTGGATT | + |
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Preference number: 2 (lower is better) Translates to: PWIGSHCGKRGQYHTGRNTRSLC*YSFLWI Trigger: AATCCACAGGAATGAATACCAACACAGTGACCTTGT...ATTTCTTCCAGTATGGTACTGTCCCCTTTTACCACAGTGACTTCCTATCCACGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR TCA 90 bp | GCATCTTACTTACTCTTACCTTACAACATCTTACCTTACTCTACCATTGTACCAAACAGAAAGGATGCATaGAGTAGTGAGGCAGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: ASYLLLPYNILPYSTIVPNRKDA*SSEAAL Trigger: CAGGGCTGCCTCACTACTTCATGCATCCTTTCTGTT...TGGTACAATGGTAGAGTAAGGTAAGATGTTGTAAGGTAAGAGTAAGTAAGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR GCA 90 bp | ACCAAATTGGAGTTAAGAGTTGCCCAGATGGAACATGTCAAATTATACCTTGGGCGCCGCAGAATTGGGTaGAAAGTTAATTGCAACTTC | + |
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Preference number: 2 (lower is better) Translates to: TKLELRVAQMEHVKLYLGRRRIG*KVNCNF Trigger: GAAGTTGCAATTAACTTTGCACCCAATTCTGCGGCG...CCCAAGGTATAATTTGACATGTTCCATCTGGGCAACTCTTAACTCCAATTTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGAGGGCACAGAGAAGTCAACTaGCAAGCTCTTTCAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: LDKENVHGSAINKSVQRGHREVN*QALSRQ Trigger: CTGTCTTGAAAGAGCTTGGCAGTTGACTTCTCTGTG...CCCTCTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR CCA 90 bp | CCGTGGATAGGAAGTCACTGTGGTAAAAGGGGACAGTACCATACTGGAAGAAATGGAATATTATGCATGTaGTGTACAGACATACATGCA | + |
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Preference number: 2 (lower is better) Translates to: PWIGSHCGKRGQYHTGRNGILCM*CTDIHA Trigger: TGCATGTATGTCTGTACACCACATGCATAATATTCC...ATTTCTTCCAGTATGGTACTGTCCCCTTTTACCACAGTGACTTCCTATCCACGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR CAA 90 bp | AAGAAGCAAGCAAACAAAATGAGGGGAAGAACCCTTTGCTTCTGGTaGAATCACATAAGGTGTCATAACAGCTCCAGCTCTGTATCTTTA | + |
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Preference number: 2 (lower is better) Translates to: KKQANKMRGRTLCFW*NHIRCHNSSSSVSL Trigger: TAAAGATACAGAGCTGGAGCTGTTATGACACCTTATGTGATTCAACCAGAAGCAAAGGGTTCTTCCCCTCATTTTGTTTGCTTGCTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR CAA 90 bp | CACCCCAGTTTCTGCCTTCCATGTAATGGGACCAATGCAAATGTTTaGAACCATATTTGTAAGTGTACACAGATGTTCCAACTCAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: HPSFCLPCNGTNANV*NHICKCTQMFQLSL Trigger: AAGACTGAGTTGGAACATCTGTGTACACTTACAAATATGGTTCAAAACATTTGCATTGGTCCCATTACATGGAAGGCAGAAACTGGGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR TCA 90 bp | ACACAGAGCTTACTATGCATATCCTACCTAAATCACACATTGCGTCACATAACCACTAAAGTCAGATGTTaGAGGTCTCCCCACCAAATT | + |
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Preference number: 2 (lower is better) Translates to: TQSLLCISYLNHTLRHITTKVRC*RSPHQI Trigger: AATTTGGTGGGGAGACCTTCAACATCTGACTTTAGT...GGTTATGTGACGCAATGTGTGATTTAGGTAGGATATGCATAGTAAGCTCTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR GCA 90 bp | CCGTGGATAGGAAGTCACTGTGGTAAAAGGGGACAGTACCATACTGGAAGAAATTTGACATTTTCAGACTaGAGTCTTAGCATTCTACAA | + |
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Preference number: 2 (lower is better) Translates to: PWIGSHCGKRGQYHTGRNLTFSD*SLSILQ Trigger: TTGTAGAATGCTAAGACTGCAGTCTGAAAATGTCAA...ATTTCTTCCAGTATGGTACTGTCCCCTTTTACCACAGTGACTTCCTATCCACGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR GCA 90 bp | ACCAAATTGGAGTTAAGAGTTGCCCAGATGGAACATGTCAAATTATACCTTGGGAGGGGAAGAACCCTTTaGTTCTGGTTGAATCACATA | + |
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Preference number: 2 (lower is better) Translates to: TKLELRVAQMEHVKLYLGRGRTL*FWLNHI Trigger: TATGTGATTCAACCAGAAGCAAAGGGTTCTTCCCCT...CCCAAGGTATAATTTGACATGTTCCATCTGGGCAACTCTTAACTCCAATTTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR GCA 90 bp | GCAATTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGCACAGAGAAGTCAACTaGCAAGCTCTTTCAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: AIGQRKCPWFSYKQICPEHREVN*QALSRQ Trigger: CTGTCTTGAAAGAGCTTGGCAGTTGACTTCTCTGTG...CTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCTTGACAATTCAGATATACAATGGTCTTCAAAACCCACAGAAAGTTGCATTCAAGTCATTGTCACTTaGCTGAGCACTAGAGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: VLDNSDIQWSSKPTESCIQVIVT*LSTRGV Trigger: CACTCCTCTAGTGCTCAGCCAAGTGACAATGACTTG...AATGCAACTTTCTGTGGGTTTTGAAGACCATTGTATATCTGAATTGTCAAGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR CAA 90 bp | GGTAAACGCCGCAGAATTGGGTGCAAAGTTAATTGCAACTTCTTATaGAGTTGTGGAGCATGCCAATCTAAAAGACACACTTTTGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: GKRRRIGCKVNCNFL*SCGACQSKRHTFAK Trigger: TTTTGCAAAAGTGTGTCTTTTAGATTGGCATGCTCCACAACTCAATAAGAAGTTGCAATTAACTTTGCACCCAATTCTGCGGCGTTTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR TCA 90 bp | GCAATTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGAACAATGAACAACAGTaGGAAACTGGAGAGCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: AIGQRKCPWFSYKQICPENNEQQ*ETGELV Trigger: AACCAGCTCTCCAGTTTCTCACTGTTGTTCATTGTT...CTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCTTGACAATTCAGATATACAATGGTCTTCAAAACCCACAGAAAGTTGCATTAGCAAGCAAACAAAATaGGGGGAAGAACCCTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: VLDNSDIQWSSKPTESCISKQTK*GEEPFA Trigger: AGCAAAGGGTTCTTCCCCTCATTTTGTTTGCTTGCT...AATGCAACTTTCTGTGGGTTTTGAAGACCATTGTATATCTGAATTGTCAAGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGAGGGTATCTGTTTTGTGAGTaGGGATCTGTTTCAACGGTT | + |
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Preference number: 2 (lower is better) Translates to: LDKENVHGSAINKSVQRGYLFCE*GSVSTV Trigger: AACCGTTGAAACAGATCCTCACTCACAAAACAGATA...CCCTCTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAAATTGGAGTTAAGAGTTGCCCAGATGGAACATGTCAAATTATACCTTGGGTTGGTATCTGTTTTGTaGGTGAGGATCTGTTTCAAC | + |
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Preference number: 2 (lower is better) Translates to: TKLELRVAQMEHVKLYLGLVSVL*VRICFN Trigger: GTTGAAACAGATCCTCACTCACAAAACAGATACCAA...CCCAAGGTATAATTTGACATGTTCCATCTGGGCAACTCTTAACTCCAATTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR TCA 90 bp | GCATCTTACTTACTCTTACCTTACAACATCTTACCTTACTCTACCATTGTACCACATGTTTCTCTCCGTTaGTTCCCACTTCTCTACCAT | + |
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Preference number: 2 (lower is better) Translates to: ASYLLLPYNILPYSTIVPHVSLR*FPLLYH Trigger: ATGGTAGAGAAGTGGGAATCAACGGAGAGAAACATG...TGGTACAATGGTAGAGTAAGGTAAGATGTTGTAAGGTAAGAGTAAGTAAGATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCTTGACAATTCAGATATACAATGGTCTTCAAAACCCACAGAAAGTTGCATTCATGTTTCTCTCCGTTaGTTCCCACTTCTCTACCAT | + |
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Preference number: 2 (lower is better) Translates to: VLDNSDIQWSSKPTESCIHVSLR*FPLLYH Trigger: ATGGTAGAGAAGTGGGAATCAACGGAGAGAAACATG...AATGCAACTTTCTGTGGGTTTTGAAGACCATTGTATATCTGAATTGTCAAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR TCA 90 bp | GCAATTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGAGTCTAGAAGAGCACTaGTACCAACACCTATATGGT | + |
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Preference number: 2 (lower is better) Translates to: AIGQRKCPWFSYKQICPESLEEH*YQHLYG Trigger: ACCATATAGGTGTTGGTATCAGTGCTCTTCTAGACT...CTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGAGGGCCAGGTTTTATTTCCTaGACTAAATGTTGGCACACA | + |
|
Preference number: 2 (lower is better) Translates to: LDKENVHGSAINKSVQRGPGFIS*TKCWHT Trigger: TGTGTGCCAACATTTAGTGCAGGAAATAAAACCTGG...CCCTCTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGCTTGACAATTCAGATATACAATGGTCTTCAAAACCCACAGAAAGTTGCATTGTAGGCATCAGGCAATaGACATGGTGCATATACATG | + |
|
Preference number: 2 (lower is better) Translates to: VLDNSDIQWSSKPTESCIVGIRQ*TWCIYM Trigger: CATGTATATGCACCATGTGCATTGCCTGATGCCTAC...AATGCAACTTTCTGTGGGTTTTGAAGACCATTGTATATCTGAATTGTCAAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGAGGGAACCTTTGCAGCTTCTaGTTTACCTACAAGTCATTG | + |
|
Preference number: 2 (lower is better) Translates to: LDKENVHGSAINKSVQRGNLCSF*FTYKSL Trigger: CAATGACTTGTAGGTAAAGCAGAAGCTGCAAAGGTT...CCCTCTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCAAATTGGAGTTAAGAGTTGCCCAGATGGAACATGTCAAATTATACCTTGGGGGATTACATTATTTCTaGGACAGTCTGAGCTGCATA | + |
|
Preference number: 2 (lower is better) Translates to: TKLELRVAQMEHVKLYLGGLHYF*DSLSCI Trigger: TATGCAGCTCAGACTGTCCCAGAAATAATGTAATCC...CCCAAGGTATAATTTGACATGTTCCATCTGGGCAACTCTTAACTCCAATTTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCAAATTGGAGTTAAGAGTTGCCCAGATGGAACATGTCAAATTATACCTTGGGGAGTTCTGTCTCAGTTaGTTTCATCCTTACATGACA | + |
|
Preference number: 2 (lower is better) Translates to: TKLELRVAQMEHVKLYLGEFCLS*FHPYMT Trigger: TGTCATGTAAGGATGAAACCAACTGAGACAGAACTC...CCCAAGGTATAATTTGACATGTTCCATCTGGGCAACTCTTAACTCCAATTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGAGGGGAGTTCTGTCTCAGTTaGTTTCATCCTTACATGACA | + |
|
Preference number: 2 (lower is better) Translates to: LDKENVHGSAINKSVQRGEFCLS*FHPYMT Trigger: TGTCATGTAAGGATGAAACCAACTGAGACAGAACTC...CCCTCTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR CAA 90 bp | AAAGCACTAGTATGCACAAAGCCATTTCTTATGCTAGTGTCACTGTaGTGTATGCATGTGAGAGCATCTTACTTACTCTTACCTTACAAC | + |
|
Preference number: 2 (lower is better) Translates to: KALVCTKPFLMLVSL*CMHVRASYLLLPYN Trigger: GTTGTAAGGTAAGAGTAAGTAAGATGCTCTCACATGCATACACAACAGTGACACTAGCATAAGAAATGGCTTTGTGCATACTAGTGCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGAGGGCTGTTAAAAGAAGATTaGCATTTTCAGACTGCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LDKENVHGSAINKSVQRGLLKED*HFQTAV Trigger: GACTGCAGTCTGAAAATGTCAATCTTCTTTTAACAG...CCCTCTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGCTTGACAATTCAGATATACAATGGTCTTCAAAACCCACAGAAAGTTGCATTAACAATGAACAACAGTaGGAAACTGGAGAGCTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: VLDNSDIQWSSKPTESCINNEQQ*ETGELV Trigger: AACCAGCTCTCCAGTTTCTCACTGTTGTTCATTGTT...AATGCAACTTTCTGTGGGTTTTGAAGACCATTGTATATCTGAATTGTCAAGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAATTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGGATCAGGTACCTGAATaGAACAAACCTCTAAGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: AIGQRKCPWFSYKQICPEDQVPE*NKPLSV Trigger: TACACTTAGAGGTTTGTTTCATTCAGGTACCTGATC...CTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAATTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGCTTGACAATTCAGATATACAATGGTCTTCAAAACCCACAGAAAGTTGCATTGGGATAGGTGAATTATaGAAACGTAACTATGTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: VLDNSDIQWSSKPTESCIGIGEL*KRNYVG Trigger: GCCCACATAGTTACGTTTTCATAATTCACCTATCCC...AATGCAACTTTCTGTGGGTTTTGAAGACCATTGTATATCTGAATTGTCAAGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAATTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGAAGAGGGGAAATTATTaGGGTTTGGTGTTTGCTATC | + |
|
Preference number: 2 (lower is better) Translates to: AIGQRKCPWFSYKQICPEKRGNY*GLVFAI Trigger: GATAGCAAACACCAAACCTCAATAATTTCCCCTCTT...CTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAATTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR GCA 90 bp | GCATCTTACTTACTCTTACCTTACAACATCTTACCTTACTCTACCATTGTACCAATCTCCCTAAACCTTTaGAGCTTCTGCTTTACCTAC | + |
|
Preference number: 2 (lower is better) Translates to: ASYLLLPYNILPYSTIVPISLNL*SFCFTY Trigger: GTAGGTAAAGCAGAAGCTGCAAAGGTTTAGGGAGAT...TGGTACAATGGTAGAGTAAGGTAAGATGTTGTAAGGTAAGAGTAAGTAAGATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGCTTGACAATTCAGATATACAATGGTCTTCAAAACCCACAGAAAGTTGCATTATCTCCCTAAACCTTTaGAGCTTCTGCTTTACCTAC | + |
|
Preference number: 2 (lower is better) Translates to: VLDNSDIQWSSKPTESCIISLNL*SFCFTY Trigger: GTAGGTAAAGCAGAAGCTGCAAAGGTTTAGGGAGAT...AATGCAACTTTCTGTGGGTTTTGAAGACCATTGTATATCTGAATTGTCAAGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCAAATTGGAGTTAAGAGTTGCCCAGATGGAACATGTCAAATTATACCTTGGGTCCTGCACTAAATGTTaGCACACAAATGTCTATAAC | + |
|
Preference number: 2 (lower is better) Translates to: TKLELRVAQMEHVKLYLGSCTKC*HTNVYN Trigger: GTTATAGACATTTGTGTGCCAACATTTAGTGCAGGA...CCCAAGGTATAATTTGACATGTTCCATCTGGGCAACTCTTAACTCCAATTTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTGAACAAGGTCACTGTGTTGGTATTCATTCCTGTGGATTATATTCTGCATGGATTACATTATTTCTaGGACAGTCTGAGCTGCATA | + |
|
Preference number: 2 (lower is better) Translates to: SVNKVTVLVFIPVDYILHGLHYF*DSLSCI Trigger: TATGCAGCTCAGACTGTCCCAGAAATAATGTAATCC...ATGCAGAATATAATCCACAGGAATGAATACCAACACAGTGACCTTGTTCACTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAATTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGACAGAAGAAGGAGGCTaGCACAATTTTGTGAGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: AIGQRKCPWFSYKQICPETEEGG*HNFVSL Trigger: TAAACTCACAAAATTGTGCCAGCCTCCTTCTTCTGT...CTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAATTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTGAACAAGGTCACTGTGTTGGTATTCATTCCTGTGGATTATATTCTGCATGTTGGAGAAAACCACTaGCATTTAATATCACCACAC | + |
|
Preference number: 2 (lower is better) Translates to: SVNKVTVLVFIPVDYILHVGENH*HLISPH Trigger: GTGTGGTGATATTAAATGCCAGTGGTTTTCTCCAAC...ATGCAGAATATAATCCACAGGAATGAATACCAACACAGTGACCTTGTTCACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAATTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGTCCTATCAATTAGAATaGTTGGAGAAAACCACTGGC | + |
|
Preference number: 2 (lower is better) Translates to: AIGQRKCPWFSYKQICPESYQLE*LEKTTG Trigger: GCCAGTGGTTTTCTCCAACCATTCTAATTGATAGGA...CTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAATTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR TCA 90 bp | TCAGTGAACAAGGTCACTGTGTTGGTATTCATTCCTGTGGATTATATTCTGCATCTGTTAAAAGAAGATTaGCATTTTCAGACTGCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SVNKVTVLVFIPVDYILHLLKED*HFQTAV Trigger: GACTGCAGTCTGAAAATGTCAATCTTCTTTTAACAG...ATGCAGAATATAATCCACAGGAATGAATACCAACACAGTGACCTTGTTCACTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR TCA 90 bp | GCATCTTACTTACTCTTACCTTACAACATCTTACCTTACTCTACCATTGTACCACTATCTTCTGCTCTCTaGAGGAATATTATGCATGTG | + |
|
Preference number: 2 (lower is better) Translates to: ASYLLLPYNILPYSTIVPLSSAL*RNIMHV Trigger: CACATGCATAATATTCCTTCAGAGAGCAGAAGATAG...TGGTACAATGGTAGAGTAAGGTAAGATGTTGTAAGGTAAGAGTAAGTAAGATGC 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGCTTGACAATTCAGATATACAATGGTCTTCAAAACCCACAGAAAGTTGCATTCTATCTTCTGCTCTCTaGAGGAATATTATGCATGTG | + |
|
Preference number: 2 (lower is better) Translates to: VLDNSDIQWSSKPTESCILSSAL*RNIMHV Trigger: CACATGCATAATATTCCTTCAGAGAGCAGAAGATAG...AATGCAACTTTCTGTGGGTTTTGAAGACCATTGTATATCTGAATTGTCAAGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAATTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGGTTAATTTAGAACAGTaGGTATTCTCCCATGTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: AIGQRKCPWFSYKQICPEVNLEQ*VFSHVR Trigger: CCTTACATGGGAGAATACTCACTGTTCTAAATTAAC...CTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAATTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGAGGGTTGACATTTTCAGACTaGAGTCTTAGCATTCTACAA | + |
|
Preference number: 2 (lower is better) Translates to: LDKENVHGSAINKSVQRGLTFSD*SLSILQ Trigger: TTGTAGAATGCTAAGACTGCAGTCTGAAAATGTCAA...CCCTCTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCAAATTGGAGTTAAGAGTTGCCCAGATGGAACATGTCAAATTATACCTTGGGTCTGAAGGAATATTATaGATGTGGTGTACAGACATA | + |
|
Preference number: 2 (lower is better) Translates to: TKLELRVAQMEHVKLYLGSEGIL*MWCTDI Trigger: TATGTCTGTACACCACATGCATAATATTCCTTCAGA...CCCAAGGTATAATTTGACATGTTCCATCTGGGCAACTCTTAACTCCAATTTGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGAGGGACTAAAGCACTAGTATaGACAAAGCCATTTCTTATG | + |
|
Preference number: 2 (lower is better) Translates to: LDKENVHGSAINKSVQRGTKALV*TKPFLM Trigger: CATAAGAAATGGCTTTGTGCATACTAGTGCTTTAGT...CCCTCTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCAAATTGGAGTTAAGAGTTGCCCAGATGGAACATGTCAAATTATACCTTGGGCCAACACCTATATGGTaGATATGTACACAATTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TKLELRVAQMEHVKLYLGPTPIW*ICTQLE Trigger: TTCTAATTGTGTACATATGCACCATATAGGTGTTGG...CCCAAGGTATAATTTGACATGTTCCATCTGGGCAACTCTTAACTCCAATTTGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGCTTGACAATTCAGATATACAATGGTCTTCAAAACCCACAGAAAGTTGCATTACAGAAGAAGGAGGCTaGCACAATTTTGTGAGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: VLDNSDIQWSSKPTESCITEEGG*HNFVSL Trigger: TAAACTCACAAAATTGTGCCAGCCTCCTTCTTCTGT...AATGCAACTTTCTGTGGGTTTTGAAGACCATTGTATATCTGAATTGTCAAGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR CCA 90 bp | GCATCTTACTTACTCTTACCTTACAACATCTTACCTTACTCTACCATTGTACCAAGAACCCTTTGCTTCTaGTTGAATCACATAAGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: ASYLLLPYNILPYSTIVPRTLCF*LNHIRC Trigger: ACACCTTATGTGATTCAACCAGAAGCAAAGGGTTCT...TGGTACAATGGTAGAGTAAGGTAAGATGTTGTAAGGTAAGAGTAAGTAAGATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR TCA 90 bp | GCATCTTACTTACTCTTACCTTACAACATCTTACCTTACTCTACCATTGTACCAGTTAATTTAGAACAGTaGGTATTCTCCCATGTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: ASYLLLPYNILPYSTIVPVNLEQ*VFSHVR Trigger: CCTTACATGGGAGAATACTCACTGTTCTAAATTAAC...TGGTACAATGGTAGAGTAAGGTAAGATGTTGTAAGGTAAGAGTAAGTAAGATGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR GCA 90 bp | GCAATTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGGGGTGCAAAGTTAATTaGAACTTCTTATTGAGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: AIGQRKCPWFSYKQICPEGCKVN*NFLLSC Trigger: ACAACTCAATAAGAAGTTGCAATTAACTTTGCACCC...CTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAATTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR GCA 90 bp | GCAATTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGACTAAAGCACTAGTATaGACAAAGCCATTTCTTATG | + |
|
Preference number: 2 (lower is better) Translates to: AIGQRKCPWFSYKQICPETKALV*TKPFLM Trigger: CATAAGAAATGGCTTTGTGCATACTAGTGCTTTAGT...CTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAATTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR CCA 90 bp | GCATCTTACTTACTCTTACCTTACAACATCTTACCTTACTCTACCATTGTACCAGGAATATTATGCATGTaGTGTACAGACATACATGCA | + |
|
Preference number: 2 (lower is better) Translates to: ASYLLLPYNILPYSTIVPGILCM*CTDIHA Trigger: TGCATGTATGTCTGTACACCACATGCATAATATTCC...TGGTACAATGGTAGAGTAAGGTAAGATGTTGTAAGGTAAGAGTAAGTAAGATGC 37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGCTTGACAATTCAGATATACAATGGTCTTCAAAACCCACAGAAAGTTGCATTCCCACTTCTCTACCATaGCAAATTTATCTTTGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: VLDNSDIQWSSKPTESCIPTSLP*QIYLCN Trigger: ATTGCAAAGATAAATTTGCCATGGTAGAGAAGTGGG...AATGCAACTTTCTGTGGGTTTTGAAGACCATTGTATATCTGAATTGTCAAGCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR CAA 90 bp | CAAGCTCTTTCAAGACAGGTTAAGCAAATCTTATATAATTTCTGCTaGACAAAATATCTGTCAGATATACTAGGCCAGAAGGCTGAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: QALSRQVKQILYNFC*TKYLSDILGQKAED Trigger: ATCTTCAGCCTTCTGGCCTAGTATATCTGACAGATATTTTGTCAAGCAGAAATTATATAAGATTTGCTTAACCTGTCTTGAAAGAGCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR GCA 90 bp | GCATCTTACTTACTCTTACCTTACAACATCTTACCTTACTCTACCATTGTACCATCTGAAGGAATATTATaGATGTGGTGTACAGACATA | + |
|
Preference number: 2 (lower is better) Translates to: ASYLLLPYNILPYSTIVPSEGIL*MWCTDI Trigger: TATGTCTGTACACCACATGCATAATATTCCTTCAGA...TGGTACAATGGTAGAGTAAGGTAAGATGTTGTAAGGTAAGAGTAAGTAAGATGC 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR GCA 90 bp | GCATCTTACTTACTCTTACCTTACAACATCTTACCTTACTCTACCATTGTACCAGGGTGCAAAGTTAATTaGAACTTCTTATTGAGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: ASYLLLPYNILPYSTIVPGCKVN*NFLLSC Trigger: ACAACTCAATAAGAAGTTGCAATTAACTTTGCACCC...TGGTACAATGGTAGAGTAAGGTAAGATGTTGTAAGGTAAGAGTAAGTAAGATGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGCTTGACAATTCAGATATACAATGGTCTTCAAAACCCACAGAAAGTTGCATTTATAAAAACAATATTTaGGACTGTCCAGGCATTCAG | + |
|
Preference number: 2 (lower is better) Translates to: VLDNSDIQWSSKPTESCIYKNNI*DCPGIQ Trigger: CTGAATGCCTGGACAGTCCCAAATATTGTTTTTATA...AATGCAACTTTCTGTGGGTTTTGAAGACCATTGTATATCTGAATTGTCAAGCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR GCA 72 bp | CACGTAGTAGCCAAAATGGAAATTCATGGTGCCACGTaGCACCCCAGTTTCTGCCTTCCATGTAATGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: HVVAKMEIHGAT*HPSFCLPCNGT Trigger: GGTCCCATTACATGGAAGGCAGAAACTGGGGTGGCACGTGGCACCATGAATTTCCATTTTGGCTACTACGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR TCA 72 bp | GAGGAGTCTTCAAGCACTCAACAGTCAGACCCTCCATaGATCTCCATGTTTCTCTCCGTTGATTCCCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: EESSSTQQSDPP*ISMFLSVDSHF Trigger: GAAGTGGGAATCAACGGAGAGAAACATGGAGATTCATGGAGGGTCTGACTGTTGAGTGCTTGAAGACTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR CCA 72 bp | ACGTTACTAACACGTAGTAGCCAAAATGGAAATTCATaGTGCCACGTGCCACCCCAGTTTCTGCCTTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: TLLTRSSQNGNS*CHVPPQFLPSM Trigger: CATGGAAGGCAGAAACTGGGGTGGCACGTGGCACCATGAATTTCCATTTTGGCTACTACGTGTTAGTAACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR CCA 72 bp | AGAATTGAGGTAGGTGACATTTGGTGTTCCCAGACTTaGGGTCTGAGGAGAACTATAAGGAGGGCGAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RIEVGDIWCSQT*GLRRTIRRARR Trigger: TCTTCTCGCCCTCCTTATAGTTCTCCTCAGACCCCAAGTCTGGGAACACCAAATGTCACCTACCTCAATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAATGCTGTACTGGGGGTAAACGCCGCAGAATTGGGTGCAAAGTTAATTGCCTCTCTGGGGTTCTTTaGACCTCAGTAATCCATATT | + |
|
Preference number: 3 (lower is better) Translates to: LECCTGGKRRRIGCKVNCLSGVL*TSVIHI Trigger: AATATGGATTACTGAGGTCAAAAGAACCCCAGAGAG...GCAATTAACTTTGCACCCAATTCTGCGGCGTTTACCCCCAGTACAGCATTCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR TCA 72 bp | CCTGACTCAGCTATTTATCACCCCAGTTACTCACTATaGGAGGAGTCTTCAAGCACTCAACAGTCAGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: PDSAIYHPSYSL*EESSSTQQSDP Trigger: AGGGTCTGACTGTTGAGTGCTTGAAGACTCCTCTCATAGTGAGTAACTGGGGTGATAAATAGCTGAGTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR GCA 72 bp | ATGGAAATTCATGGTGCCACGTGCCACCCCAGTTTCTaGCTTCCATGTAATGGGACCAATGCAAATGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: MEIHGATCHPSF*LPCNGTNANVL Trigger: CAAAACATTTGCATTGGTCCCATTACATGGAAGGCAGAAACTGGGGTGGCACGTGGCACCATGAATTTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR CCA 72 bp | AAGGAACTGAGTTCTGTTCCCAGCAAGTACACCAGGTaGCTCACAACTGCATATAACTCCAGTTCCATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KELSSVPSKYTR*LTTAYNSSSIG Trigger: TCCTATGGAACTGGAGTTATATGCAGTTGTGAGCCACCTGGTGTACTTGCTGGGAACAGAACTCAGTTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR GCA 72 bp | GAATGCTGTACTGGGGGTAAACGCCGCAGAATTGGGTaGAAAGTTAATTGCAACTTCTTATTGAGTTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: ECCTGGKRRRIG*KVNCNFLLSCG Trigger: TCCACAACTCAATAAGAAGTTGCAATTAACTTTGCACCCAATTCTGCGGCGTTTACCCCCAGTACAGCATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR GCA 72 bp | TGTCCAGAGAGGGCAAACAGACACAGAGAAGTCAACTaGCAAGCTCTTTCAAGACAGGTTAAGCAAATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: CPERANRHREVN*QALSRQVKQIL Trigger: TAAGATTTGCTTAACCTGTCTTGAAAGAGCTTGGCAGTTGACTTCTCTGTGTCTGTTTGCCCTCTCTGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR CCA 72 bp | CAAGCAAACAAAATGAGGGGAAGAACCCTTTGCTTCTaGTTGAATCACATAAGGTGTCATAACAGCTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: QANKMRGRTLCF*LNHIRCHNSSS Trigger: GCTGGAGCTGTTATGACACCTTATGTGATTCAACCAGAAGCAAAGGGTTCTTCCCCTCATTTTGTTTGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR TCA 72 bp | GTCAGACCCTCCATGAATCTCCATGTTTCTCTCCGTTaGTTCCCACTTCTCTACCATGGCAAATTTATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VRPSMNLHVSLR*FPLLYHGKFIF Trigger: AAAGATAAATTTGCCATGGTAGAGAAGTGGGAATCAACGGAGAGAAACATGGAGATTCATGGAGGGTCTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR TCA 72 bp | TTGATGGAGGGAGTACATCCTCTAACGACAGAACTGTaGTACTATGTGATGTCAGAACTTCTTCCCAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: LMEGVHPLTTEL*YYVMSELLPKC Trigger: GCATTTGGGAAGAAGTTCTGACATCACATAGTATCACAGTTCTGTCGTTAGAGGATGTACTCCCTCCATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR GCA 72 bp | CGTAACTATGTGGGCTACCAAATTGGAGTTAAGAGTTaGCCAGATGGAACATGTCAAATTATACCTTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RNYVGYQIGVKS*PDGTCQIIPWG Trigger: ACCCCAAGGTATAATTTGACATGTTCCATCTGGGCAACTCTTAACTCCAATTTGGTAGCCCACATAGTTACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGAGGGAATGTGAGTACATCCTaGACTAGGCCATCACCCATA | + |
|
Preference number: 3 (lower is better) Translates to: LDKENVHGSAINKSVQRGNVSTS*TRPSPI Trigger: TATGGGTGATGGCCTAGTCAAGGATGTACTCACATT...CCCTCTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGAGGGATGCTAGTGTCACTGTaGTGTATGCATGTGAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LDKENVHGSAINKSVQRGMLVSL*CMHVRA Trigger: TGCTCTCACATGCATACACAACAGTGACACTAGCAT...CCCTCTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR TCA 72 bp | CCAGTTCTAGTGGGTTTAAGGCTATCTTCTGCTCTCTaGAGGAATATTATGCATGTGGTGTACAGACATACA | + |
|
Preference number: 3 (lower is better) Translates to: PVLVGLRLSSAL*RNIMHVVYRHT Trigger: TGTATGTCTGTACACCACATGCATAATATTCCTTCAGAGAGCAGAAGATAGCCTTAAACCCACTAGAACTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR GCA 72 bp | AAGAAGCAAGCAAACAAAATGAGGGGAAGAACCCTTTaGTTCTGGTTGAATCACATAAGGTGTCATAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: KKQANKMRGRTL*FWLNHIRCHNS Trigger: GCTGTTATGACACCTTATGTGATTCAACCAGAAGCAAAGGGTTCTTCCCCTCATTTTGTTTGCTTGCTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR GCA 72 bp | CTGTCAGATATACTAGGCCAGAAGGCTGAAGATGGGTaGTCCATTGTTATAAAAACAATATTTGGGACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LSDILGQKAEDG*SIVIKTIFGTV Trigger: GACAGTCCCAAATATTGTTTTTATAACAATGGAGCACCCATCTTCAGCCTTCTGGCCTAGTATATCTGACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR CCA 72 bp | TCGATCCTATCAATTAGAATGGTTGGAGAAAACCACTaGCATTTAATATCACCACACAGAAGAAGGAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SILSIRMVGENH*HLISPHRRRRL Trigger: CAGCCTCCTTCTTCTGTGTGGTGATATTAAATGCCAGTGGTTTTCTCCAACCATTCTAATTGATAGGATCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR CCA 72 bp | CTATCTATTGTAATGCTAAATACCGACTTCAAGGCCTaGTTACTCCCAGGGATGAGAAAATCTGCACATAGA | + |
|
Preference number: 3 (lower is better) Translates to: LSIVMLNTDFKA*LLPGMRKSAHR Trigger: TCTATGTGCAGATTTTCTCATCCCTGGGAGTAACCAGGCCTTGAAGTCGGTATTTAGCATTACAATAGATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTTGACAATTCAGATATACAATGGTCTTCAAAACCCACAGAAAGTTGCATTCATCTCCCTAAACCTTaGCAGCTTCTGCTTTACCTA | + |
|
Preference number: 3 (lower is better) Translates to: VLDNSDIQWSSKPTESCIHLPKP*QLLLYL Trigger: TAGGTAAAGCAGAAGCTGCAAAGGTTTAGGGAGATG...AATGCAACTTTCTGTGGGTTTTGAAGACCATTGTATATCTGAATTGTCAAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR TCA 72 bp | GAAAGAGGAAGAAACCACTCTGGGATAGGTGAATTATaGAAACGTAACTATGTGGGCTACCAAATTGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: ERGRNHSGIGEL*KRNYVGYQIGV Trigger: AACTCCAATTTGGTAGCCCACATAGTTACGTTTTCATAATTCACCTATCCCAGAGTGGTTTCTTCCTCTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR GCA 72 bp | TATAACTCCAGTTCTAGTGGGTTTAAGGCTATCTTCTaGTCTCTGAAGGAATATTATGCATGTGGTGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: YNSSSSGFKAIF*SLKEYYACGVQ Trigger: CTGTACACCACATGCATAATATTCCTTCAGAGAGCAGAAGATAGCCTTAAACCCACTAGAACTGGAGTTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR CCA 72 bp | CTAGAATACCCAGGTTTTATTTCCTGCACTAAATGTTaGCACACAAATGTCTATAACTCCAGTTCTAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LEYPGFISCTKC*HTNVYNSSSSG Trigger: CCCACTAGAACTGGAGTTATAGACATTTGTGTGCCAACATTTAGTGCAGGAAATAAAACCTGGGTATTCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTTGACAATTCAGATATACAATGGTCTTCAAAACCCACAGAAAGTTGCATTACCCTTTGCTTCTGGTaGAATCACATAAGGTGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VLDNSDIQWSSKPTESCITLCFW*NHIRCH Trigger: ATGACACCTTATGTGATTCAACCAGAAGCAAAGGGT...AATGCAACTTTCTGTGGGTTTTGAAGACCATTGTATATCTGAATTGTCAAGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR TCA 72 bp | TCTGCCTTCCATGTAATGGGACCAATGCAAATGTTTTaGACCATATTTGTAAGTGTACACAGATGTTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: SAFHVMGPMQMF*TIFVSVHRCSN Trigger: GTTGGAACATCTGTGTACACTTACAAATATGGTTCAAAACATTTGCATTGGTCCCATTACATGGAAGGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR GCA 72 bp | CTGATAGCTCTTCTAGAATACCCAGGTTTTATTTCCTaGACTAAATGTTGGCACACAAATGTCTATAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: LIALLEYPGFIS*TKCWHTNVYNS Trigger: GGAGTTATAGACATTTGTGTGCCAACATTTAGTGCAGGAAATAAAACCTGGGTATTCTAGAAGAGCTATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR TCA 72 bp | AAAGGGACACCCCAGAGGTATATTTCCCTAAACATGTaGATATATGCAAAGAACAGAATTTGCGCACAATTA | + |
|
Preference number: 3 (lower is better) Translates to: KGTPQRYISLNM*IYAKNRICAQL Trigger: TAATTGTGCGCAAATTCTGTTCTTTGCATATATTCACATGTTTAGGGAAATATACCTCTGGGGTGTCCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR TCA 72 bp | TTGATCCCTCATAAGAATGTCACTAAAGTCAGATGTTaGAGGTCTCCCCACCAAATTCCATGTTATATATGT | + |
|
Preference number: 3 (lower is better) Translates to: LIPHKNVTKVRC*RSPHQIPCYIC Trigger: ACATATATAACATGGAATTTGGTGGGGAGACCTTCAACATCTGACTTTAGTGACATTCTTATGAGGGATCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR TCA 72 bp | AAAAGATTCAACTATAGCAGATTGGTATCTGTTTTGTaGGTGAGGATCTGTTTCAACGGTTGGTGGATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: KRFNYSRLVSVL*VRICFNGWWMY Trigger: ATACATCCACCAACCGTTGAAACAGATCCTCACTCACAAAACAGATACCAATCTGCTATAGTTGAATCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR TCA 72 bp | CTATGTGAACTTGCAACCCAAGTTACCATTAGTTGGTaGATAAATATTCCTATAACCTATAGCTGGGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LCELATQVTISW*INIPITYSWAE Trigger: TTCTGCCCAGCTATAGGTTATAGGAATATTTATTCACCAACTAATGGTAACTTGGGTTGCAAGTTCACATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR CCA 72 bp | GGCTATCTTCTGCTCTCTGAAGGAATATTATGCATGTaGTGTACAGACATACATGCAGGAAAAATTAACATA | + |
|
Preference number: 3 (lower is better) Translates to: GYLLLSEGILCM*CTDIHAGKINI Trigger: TATGTTAATTTTTCCTGCATGTATGTCTGTACACCACATGCATAATATTCCTTCAGAGAGCAGAAGATAGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR TCA 72 bp | GATTATTTGCTTTTGACTCAAGGTTATATGATTCCCTaGGCTGTGAACCCATTCTTTTGTGAATCCCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: DYLLLTQGYMIP*AVNPFFCESQK Trigger: TTTTTGGGATTCACAAAAGAATGGGTTCACAGCTCAGGGAATCATATAACCTTGAGTCAAAAGCAAATAATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR GCA 72 bp | AATCACACATTACTATATGTCACACAGAGCTTACTATaGATATCCTACCTAAATCACACATTGCGTCACATA | + |
|
Preference number: 3 (lower is better) Translates to: NHTLLYVTQSLL*ISYLNHTLRHI Trigger: TATGTGACGCAATGTGTGATTTAGGTAGGATATGCATAGTAAGCTCTGTGTGACATATAGTAATGTGTGATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR GCA 72 bp | TTCCCAAATTTGAATATTTGCACTAAAGCACTAGTATaGACAAAGCCATTTCTTATGCTAGTGTCACTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: FPNLNICTKALV*TKPFLMLVSLL Trigger: CAACAGTGACACTAGCATAAGAAATGGCTTTGTGCATACTAGTGCTTTAGTGCAAATATTCAAATTTGGGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR CCA 72 bp | ATATGGTGCATATGTACACAATTAGAAATGTTAGTGTaGCAGAAATGTCCCAGGCAGATATATAAATATCCC | + |
|
Preference number: 3 (lower is better) Translates to: IWCICTQLEMLV*QKCPRQIYKYP Trigger: GGGATATTTATATATCTGCCTGGGACATTTCTGCCACACTAACATTTCTAATTGTGTACATATGCACCATAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| CDS-3UTR TCA 90 bp | TTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGAGGGTACTTGAGCAGGCCATaGGACCCAGGCACAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LDKENVHGSAINKSVQRGYLSRP*DPGTSH Trigger: ATGGCTTGTGCCTGGGTCTCATGGCCTGCTCAAGTA...CCCTCTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAATGCTGTACTGGGGGTAAACGCCGCAGAATTGGGTGCAAAGTTAATTGCCACTATGGATATGCTTaGCTTGTCTCTTGTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LECCTGGKRRRIGCKVNCHYGYA*LVSCVC Trigger: ACAGACACAAGAGACAAGTCAAGCATATCCATAGTG...GCAATTAACTTTGCACCCAATTCTGCGGCGTTTACCCCCAGTACAGCATTCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAATGCTGTACTGGGGGTAAACGCCGCAGAATTGGGTGCAAAGTTAATTGCATAGTTTTGGTGGCTTaGTCCTCAGGAGAGACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LECCTGGKRRRIGCKVNCIVLVA*SSGETF Trigger: AAAAGTCTCTCCTGAGGACCAAGCCACCAAAACTAT...GCAATTAACTTTGCACCCAATTCTGCGGCGTTTACCCCCAGTACAGCATTCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| CDS-3UTR TCA 90 bp | ACCAAATTGGAGTTAAGAGTTGCCCAGATGGAACATGTCAAATTATACCTTGGGTGTACACAAGCCAACTaGCTGAGCAGGAGGGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: TKLELRVAQMEHVKLYLGCTQAN*LSRRDQ Trigger: TTGGTCCCTCCTGCTCAGTCAGTTGGCTTGTGTACA...CCCAAGGTATAATTTGACATGTTCCATCTGGGCAACTCTTAACTCCAATTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR CAA 72 bp | CAACTCAGTCTTCCTGATTACAATGTGAGTACATCCTaGACTAGGCCATCACCCATACCTACGGCATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLSLPDYNVSTS*TRPSPIPTASL Trigger: AAGAGATGCCGTAGGTATGGGTGATGGCCTAGTCAAGGATGTACTCACATTGTAATCAGGAAGACTGAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAATGCTGTACTGGGGGTAAACGCCGCAGAATTGGGTGCAAAGTTAATTGCAGATTGAGTAAGAGATaGCAAATGTACAAACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LECCTGGKRRRIGCKVNCRLSKR*QMYKPG Trigger: TCCTGGTTTGTACATTTGTCATCTCTTACTCAATCT...GCAATTAACTTTGCACCCAATTCTGCGGCGTTTACCCCCAGTACAGCATTCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| CDS-3UTR TCA 90 bp | TCGATCCTATCAATTAGAATGGTTGGAGAAAACCACTGGCATTTAATATCACCATGTACACAAGCCAACTaGCTGAGCAGGAGGGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: SILSIRMVGENHWHLISPCTQAN*LSRRDQ Trigger: TTGGTCCCTCCTGCTCAGTCAGTTGGCTTGTGTACA...TGGTGATATTAAATGCCAGTGGTTTTCTCCAACCATTCTAATTGATAGGATCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR CAA 72 bp | TTGCTAAAACCACTGGGCAAACATCTCCCTAAACCTTaGCAGCTTCTGCTTTACCTACAAGTCATTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LLKPLGKHLPKP*QLLLYLQVIVT Trigger: AGTGACAATGACTTGTAGGTAAAGCAGAAGCTGCAAAGGTTTAGGGAGATGTTTGCCCAGTGGTTTTAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR CAA 72 bp | CAGTTGAGAAATCATGTGCTCCTGGCTATACTTTTGTaGCTAAAACCACTGGGCAAACATCTCCCTAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: QLRNHVLLAILL*LKPLGKHLPKP Trigger: AGGTTTAGGGAGATGTTTGCCCAGTGGTTTTAGCAACAAAAGTATAGCCAGGAGCACATGATTTCTCAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| CDS-3UTR CCA 90 bp | ACACAGAGCTTACTATGCATATCCTACCTAAATCACACATTGCGTCACATAACCCTGATTGTGATTGCTTaGAAGCAACTCAGTAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TQSLLCISYLNHTLRHITLIVIA*KQLSRH Trigger: GTGCCTACTGAGTTGCTTCCAAGCAATCACAATCAG...GGTTATGTGACGCAATGTGTGATTTAGGTAGGATATGCATAGTAAGCTCTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| CDS-3UTR CCA 90 bp | ACCAAATTGGAGTTAAGAGTTGCCCAGATGGAACATGTCAAATTATACCTTGGGCTGATTGTGATTGCTTaGAAGCAACTCAGTAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TKLELRVAQMEHVKLYLGLIVIA*KQLSRH Trigger: GTGCCTACTGAGTTGCTTCCAAGCAATCACAATCAG...CCCAAGGTATAATTTGACATGTTCCATCTGGGCAACTCTTAACTCCAATTTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| 3UTR CAA 72 bp | AACCAGTTGAGAAATCATGTGCTCCTGGCTATACTTTaGTTGCTAAAACCACTGGGCAAACATCTCCCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: NQLRNHVLLAIL*LLKPLGKHLPK Trigger: TTTAGGGAGATGTTTGCCCAGTGGTTTTAGCAACAAAAGTATAGCCAGGAGCACATGATTTCTCAACTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| CDS-3UTR TCA 90 bp | ACCAAATTGGAGTTAAGAGTTGCCCAGATGGAACATGTCAAATTATACCTTGGGTTTAAATCCCAAATCTaGCAGTGTCTCTGGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: TKLELRVAQMEHVKLYLGFKSQI*QCLWNA Trigger: GGCATTCCAGAGACACTGTCAGATTTGGGATTTAAA...CCCAAGGTATAATTTGACATGTTCCATCTGGGCAACTCTTAACTCCAATTTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| CDS-3UTR TCA 90 bp | GCAATTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGTTTAAATCCCAAATCTaGCAGTGTCTCTGGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: AIGQRKCPWFSYKQICPEFKSQI*QCLWNA Trigger: GGCATTCCAGAGACACTGTCAGATTTGGGATTTAAA...CTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
||
| CDS-3UTR TCA 90 bp | GTGCTTGACAATTCAGATATACAATGGTCTTCAAAACCCACAGAAAGTTGCATTCACTATGGATATGCTTaGCTTGTCTCTTGTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLDNSDIQWSSKPTESCIHYGYA*LVSCVC Trigger: ACAGACACAAGAGACAAGTCAAGCATATCCATAGTG...AATGCAACTTTCTGTGGGTTTTGAAGACCATTGTATATCTGAATTGTCAAGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR TCA 90 bp | ACCAAATTGGAGTTAAGAGTTGCCCAGATGGAACATGTCAAATTATACCTTGGGAGATTGAGTAAGAGATaGCAAATGTACAAACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TKLELRVAQMEHVKLYLGRLSKR*QMYKPG Trigger: TCCTGGTTTGTACATTTGTCATCTCTTACTCAATCT...CCCAAGGTATAATTTGACATGTTCCATCTGGGCAACTCTTAACTCCAATTTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR CCA 90 bp | TTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGAGGGCATTTTTGTTATAACTaGGTCCTAACACTCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LDKENVHGSAINKSVQRGHFCYN*VLTLLL Trigger: CAGCAAGAGTGTTAGGACCCAGTTATAACAAAAATG...CCCTCTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR CAA 72 bp | CAGAGCTTACTATGCATATCCTACCTAAATCACACATaGCGTCACATAACCCCAGCTGAGTTATTAAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: QSLLCISYLNHT*RHITPAELLKV Trigger: TACTTTTAATAACTCAGCTGGGGTTATGTGACGCAATGTGTGATTTAGGTAGGATATGCATAGTAAGCTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR TCA 90 bp | TCAGTGAACAAGGTCACTGTGTTGGTATTCATTCCTGTGGATTATATTCTGCATACTTTTAGAAAATGCTaGGCACTATGGATATGCTTG | + |
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Preference number: 4 (lower is better) Translates to: SVNKVTVLVFIPVDYILHTFRKC*ALWICL Trigger: CAAGCATATCCATAGTGCTCAGCATTTTCTAAAAGT...ATGCAGAATATAATCCACAGGAATGAATACCAACACAGTGACCTTGTTCACTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR GCA 90 bp | TTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGAGGGTCTTTGGGCATTAAATaGTTTCTGGTGGTTATCATA | + |
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Preference number: 4 (lower is better) Translates to: LDKENVHGSAINKSVQRGSLGIK*FLVVII Trigger: TATGATAACCACCAGAAAGCATTTAATGCCCAAAGA...CCCTCTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR GCA 90 bp | TCAGTGAACAAGGTCACTGTGTTGGTATTCATTCCTGTGGATTATATTCTGCATCATATACAGAGCAGTTaGCACATTTCTGGAAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: SVNKVTVLVFIPVDYILHHIQSS*HISGSK Trigger: TTTACTTCCAGAAATGTGGCAACTGCTCTGTATATG...ATGCAGAATATAATCCACAGGAATGAATACCAACACAGTGACCTTGTTCACTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR CAA 72 bp | AAAATCCAAAGTGTCTCAGTGAACAAGGTCACTGTGTaGGTATTCATTCCTGTGGATTATATTCTGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: KIQSVSVNKVTV*VFIPVDYILHL Trigger: AAGATGCAGAATATAATCCACAGGAATGAATACCAACACAGTGACCTTGTTCACTGAGACACTTTGGATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR CAA 72 bp | GTTGATTCCCACTTCTCTACCATGGCAAATTTATCTTaGCAATGTCCAGTGATGAGAAACCAATTTAAAACC | + |
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Preference number: 4 (lower is better) Translates to: VDSHFSTMANLS*QCPVMRNQFKT Trigger: GGTTTTAAATTGGTTTCTCATCACTGGACATTGCAAAGATAAATTTGCCATGGTAGAGAAGTGGGAATCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR GCA 90 bp | GTGCTTGACAATTCAGATATACAATGGTCTTCAAAACCCACAGAAAGTTGCATTCATATACAGAGCAGTTaGCACATTTCTGGAAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: VLDNSDIQWSSKPTESCIHIQSS*HISGSK Trigger: TTTACTTCCAGAAATGTGGCAACTGCTCTGTATATG...AATGCAACTTTCTGTGGGTTTTGAAGACCATTGTATATCTGAATTGTCAAGCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR CCA 90 bp | TCGATCCTATCAATTAGAATGGTTGGAGAAAACCACTGGCATTTAATATCACCACATTTTTGTTATAACTaGGTCCTAACACTCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SILSIRMVGENHWHLISPHFCYN*VLTLLL Trigger: CAGCAAGAGTGTTAGGACCCAGTTATAACAAAAATG...TGGTGATATTAAATGCCAGTGGTTTTCTCCAACCATTCTAATTGATAGGATCGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR GCA 90 bp | GCATCTTACTTACTCTTACCTTACAACATCTTACCTTACTCTACCATTGTACCATCTTTGGGCATTAAATaGTTTCTGGTGGTTATCATA | + |
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Preference number: 4 (lower is better) Translates to: ASYLLLPYNILPYSTIVPSLGIK*FLVVII Trigger: TATGATAACCACCAGAAAGCATTTAATGCCCAAAGA...TGGTACAATGGTAGAGTAAGGTAAGATGTTGTAAGGTAAGAGTAAGTAAGATGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| 3UTR CAA 72 bp | TATAAAAACAATATTTGGGACTGTCCAGGCATTCAGTaGTCTCTGTCATTTCAGCATTTCCTGAATACTCAA | + |
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Preference number: 4 (lower is better) Translates to: YKNNIWDCPGIQ*SLSFQHFLNTQ Trigger: TTGAGTATTCAGGAAATGCTGAAATGACAGAGACAACTGAATGCCTGGACAGTCCCAAATATTGTTTTTATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS TCA 90 bp | GACTTGTCTCTTGTGTCTGTAGAGGACACTCACCATGGAAATACTTaGGCAGGCCATGAGACCCAGGCACAAGCCATCAGAGAAGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: DLSLVSVEDTHHGNT*AGHETQAQAIREAE Trigger: CTCTGCTTCTCTGATGGCTTGTGCCTGGGTCTCATGGCCTGCTCAAGTATTTCCATGGTGAGTGTCCTCTACAGACACAAGAGACAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078039.3 ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR CAA 90 bp | CTGGAATGCTGTACTGGGGGTAAACGCCGCAGAATTGGGTGCAAAGTTAATTGCGATAGTTTTGGTGGCTaGGTCCTCAGGAGAGACTTT | + |
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Preference number: 5 (lower is better) Translates to: LECCTGGKRRRIGCKVNCDSFGG*VLRRDF Trigger: AAAGTCTCTCCTGAGGACCAAGCCACCAAAACTATC...GCAATTAACTTTGCACCCAATTCTGCGGCGTTTACCCCCAGTACAGCATTCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR CAA 90 bp | TGGAATGCTGTACTGGGGGTAAACGCCGCAGAATTGGGTGCAAAGTTAATTGCAAGGATGAGGATAGTTTaGGTGGCTTGGTCCTCAGGA | + |
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Preference number: 5 (lower is better) Translates to: WNAVLGVNAAELGAKLIARMRIV*VAWSSG Trigger: TCCTGAGGACCAAGCCACCAAAACTATCCTCATCCT...TGCAATTAACTTTGCACCCAATTCTGCGGCGTTTACCCCCAGTACAGCATTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS TCA 90 bp | TGTGTCTGTAGAGGACACTCACCATGGAAATACTTGAGCAGGCCATaGGACCCAGGCACAAGCCATCAGAGAAGCAGAGTAGAAACATAT | + |
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Preference number: 5 (lower is better) Translates to: CVCRGHSPWKYLSRP*DPGTSHQRSRVETY Trigger: ATATGTTTCTACTCTGCTTCTCTGATGGCTTGTGCCTGGGTCTCATGGCCTGCTCAAGTATTTCCATGGTGAGTGTCCTCTACAGACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078039.3 ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR CAA 90 bp | GCAATTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGGAGGGACCAATGTACTaGGTGGCTCTGTGTTTAAAC | + |
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Preference number: 5 (lower is better) Translates to: AIGQRKCPWFSYKQICPEEGPMY*VALCLN Trigger: GTTTAAACACAGAGCCACCAAGTACATTGGTCCCTC...CTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR CAA 90 bp | TCGATCCTATCAATTAGAATGGTTGGAGAAAACCACTGGCATTTAATATCACCAAGGATGAGGATAGTTTaGGTGGCTTGGTCCTCAGGA | + |
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Preference number: 5 (lower is better) Translates to: SILSIRMVGENHWHLISPRMRIV*VAWSSG Trigger: TCCTGAGGACCAAGCCACCAAAACTATCCTCATCCT...TGGTGATATTAAATGCCAGTGGTTTTCTCCAACCATTCTAATTGATAGGATCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR CAA 90 bp | GCAATTGGACAAAGAAAATGTCCATGGTTCAGCTATAAACAAATCTGTCCAGAGAAAAGAATATTCCCGTaGCCAAGCTTGCAGGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: AIGQRKCPWFSYKQICPEKRIFP*PSLQES Trigger: TGACTCCTGCAAGCTTGGCAACGGGAATATTCTTTT...CTCTGGACAGATTTGTTTATAGCTGAACCATGGACATTTTCTTTGTCCAATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR CAA 90 bp | GCATCTTACTTACTCTTACCTTACAACATCTTACCTTACTCTACCATTGTACCAATTATCCACCTGGTGTaGCTGGGGCTGATTGTGATT | + |
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Preference number: 5 (lower is better) Translates to: ASYLLLPYNILPYSTIVPIIHLV*LGLIVI Trigger: AATCACAATCAGCCCCAGCAACACCAGGTGGATAAT...TGGTACAATGGTAGAGTAAGGTAAGATGTTGTAAGGTAAGAGTAAGTAAGATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR CAA 90 bp | GTGCTTGACAATTCAGATATACAATGGTCTTCAAAACCCACAGAAAGTTGCATTATTATCCACCTGGTGTaGCTGGGGCTGATTGTGATT | + |
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Preference number: 5 (lower is better) Translates to: VLDNSDIQWSSKPTESCIIIHLV*LGLIVI Trigger: AATCACAATCAGCCCCAGCAACACCAGGTGGATAAT...AATGCAACTTTCTGTGGGTTTTGAAGACCATTGTATATCTGAATTGTCAAGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR CAA 90 bp | TCGATCCTATCAATTAGAATGGTTGGAGAAAACCACTGGCATTTAATATCACCAGATAGTTTTGGTGGCTaGGTCCTCAGGAGAGACTTT | + |
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Preference number: 5 (lower is better) Translates to: SILSIRMVGENHWHLISPDSFGG*VLRRDF Trigger: AAAGTCTCTCCTGAGGACCAAGCCACCAAAACTATC...TGGTGATATTAAATGCCAGTGGTTTTCTCCAACCATTCTAATTGATAGGATCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR CAA 90 bp | ACACAGAGCTTACTATGCATATCCTACCTAAATCACACATTGCGTCACATAACCAAGCTGCAACTAGACTaGAAACTGGTGATGAGAACA | + |
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Preference number: 5 (lower is better) Translates to: TQSLLCISYLNHTLRHITKLQLD*KLVMRT Trigger: TGTTCTCATCACCAGTTTCAAGTCTAGTTGCAGCTT...GGTTATGTGACGCAATGTGTGATTTAGGTAGGATATGCATAGTAAGCTCTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR CAA 90 bp | ACCAAATTGGAGTTAAGAGTTGCCCAGATGGAACATGTCAAATTATACCTTGGGAAGCTGCAACTAGACTaGAAACTGGTGATGAGAACA | + |
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Preference number: 5 (lower is better) Translates to: TKLELRVAQMEHVKLYLGKLQLD*KLVMRT Trigger: TGTTCTCATCACCAGTTTCAAGTCTAGTTGCAGCTT...CCCAAGGTATAATTTGACATGTTCCATCTGGGCAACTCTTAACTCCAATTTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR CAA 90 bp | GTGCTTGACAATTCAGATATACAATGGTCTTCAAAACCCACAGAAAGTTGCATTAAAAGAATATTCCCGTaGCCAAGCTTGCAGGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: VLDNSDIQWSSKPTESCIKRIFP*PSLQES Trigger: TGACTCCTGCAAGCTTGGCAACGGGAATATTCTTTT...AATGCAACTTTCTGTGGGTTTTGAAGACCATTGTATATCTGAATTGTCAAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS-3UTR CAA 90 bp | TCAGTGAACAAGGTCACTGTGTTGGTATTCATTCCTGTGGATTATATTCTGCATGGAAGCCATCTCTTTTaGCAGAAGGATAAAAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: SVNKVTVLVFIPVDYILHGSHLF*QKDKKK Trigger: CTTCTTTTTATCCTTCTGCAAAAAGAGATGGCTTCC...ATGCAGAATATAATCCACAGGAATGAATACCAACACAGTGACCTTGTTCACTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS CAA 90 bp | AGCATGTACACAAGCCAACTGACTGAGCAGGAGGGACCAATGTACTaGGTGGCTCTGTGTTTAAACATTATCCACCTGGTGTTGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SMYTSQLTEQEGPMY*VALCLNIIHLVLLG Trigger: CCCCAGCAACACCAGGTGGATAATGTTTAAACACAGAGCCACCAAGTACATTGGTCCCTCCTGCTCAGTCAGTTGGCTTGTGTACATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078039.3 ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS CAA 72 bp | ACAAGCCAACTGACTGAGCAGGAGGGACCAATGTACTaGGTGGCTCTGTGTTTAAACATTATCCACCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: TSQLTEQEGPMY*VALCLNIIHLV Trigger: CACCAGGTGGATAATGTTTAAACACAGAGCCACCAAGTACATTGGTCCCTCCTGCTCAGTCAGTTGGCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078039.3 ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS TCA 72 bp | GAGTCAAGATGTTTAAAAGCATGTACACAAGCCAACTaGCTGAGCAGGAGGGACCAATGTACTTGGTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: ESRCLKACTQAN*LSRRDQCTWWL Trigger: GAGCCACCAAGTACATTGGTCCCTCCTGCTCAGTCAGTTGGCTTGTGTACATGCTTTTAAACATCTTGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078039.3 ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS TCA 72 bp | AGACTTTTAGAAAATGCTGAGCACTATGGATATGCTTaGCTTGTCTCTTGTGTCTGTAGAGGACACTCACCA | + |
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Preference number: 6 (lower is better) Translates to: RLLENAEHYGYA*LVSCVCRGHSP Trigger: TGGTGAGTGTCCTCTACAGACACAAGAGACAAGTCAAGCATATCCATAGTGCTCAGCATTTTCTAAAAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078039.3 ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS CAA 72 bp | GAGATGACAAATGTACAAACCAGGATGAGGATAGTTTaGGTGGCTTGGTCCTCAGGAGAGACTTTTAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: EMTNVQTRMRIV*VAWSSGETFRK Trigger: TTTTCTAAAAGTCTCTCCTGAGGACCAAGCCACCAAAACTATCCTCATCCTGGTTTGTACATTTGTCATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078039.3 ENSMUST00000228244.2 ENSMUST00000228664.2 |
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| CDS CAA 72 bp | CAGTTAGCAAAAGTCAAGTGCTTTATAATCACATCTTaGGGCATTAAATGCTTTCTGGTGGTTATCATAAAG | + |
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Preference number: 6 (lower is better) Translates to: QLAKVKCFIITS*GIKCFLVVIIK Trigger: CTTTATGATAACCACCAGAAAGCATTTAATGCCCAAAGATGTGATTATAAAGCACTTGACTTTTGCTAACTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078039.3 ENSMUST00000228244.2 ENSMUST00000228664.2 |
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