Pregenerated sensors for VMN1R76 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000115267Ensembl transcript IDs: ENSMUST00000058772.2, ENSMUST00000226300.2, ENSMUST00000226947.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCCATCACTGGGAGGAGATGCCCTTGGTCTTGCAAAGATTCTATaGCCCAGTACAGGGGAATGCCAGGGCCAGGAAGCAGGAGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: WPSLGGDALGLAKIL*PSTGECQGQEAGVG Trigger: ACCCACTCCTGCTTCCTGGCCCTGGCATTCCCCTGTACTGGGGCATAGAATCTTTGCAAGACCAAGGGCATCTCCTCCCAGTGATGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR CCA 90 bp | TCTCTAGCTGCATATGTAGCAGAAGATGGCCTAATTGGCCATCACTaGGAGGAGATGCCCTTGGTCTTGCAAAGATTCTATGCCCCAGTA | + |
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Preference number: 1 (lower is better) Translates to: SLAAYVAEDGLIGHH*EEMPLVLQRFYAPV Trigger: TACTGGGGCATAGAATCTTTGCAAGACCAAGGGCATCTCCTCCCAGTGATGGCCAATTAGGCCATCTTCTGCTACATATGCAGCTAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR GCA 90 bp | CACTACAAGACCTGTCTGCCTCTGAGTTTGCTTGTTTCTGTGCAATaGTATCTGCTAACAGGTGGCCCTTTTCAACTCAAATCTAGATCC | + |
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Preference number: 1 (lower is better) Translates to: HYKTCLPLSLLVSVQ*YLLTGGPFQLKSRS Trigger: GGATCTAGATTTGAGTTGAAAAGGGCCACCTGTTAGCAGATAGCATTGCACAGAAACAAGCAAACTCAGAGGCAGACAGGTCTTGTAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR CCA 90 bp | ACAGGACCCTTATATAGCTGTCTCTTGGTAGGCTATGCCAGTGCCTaGCAAATACAGAAGTCAATGCTCACAGTCATCCATTGTATGGAA | + |
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Preference number: 1 (lower is better) Translates to: TGPLYSCLLVGYASA*QIQKSMLTVIHCME Trigger: TTCCATACAATGGATGACTGTGAGCATTGACTTCTGTATTTGCCAGGCACTGGCATAGCCTACCAAGAGACAGCTATATAAGGGTCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR GCA 90 bp | CTAGGTACCCTATATGTGGCAGAGCATGGCAGAGTACACTTTCTTTaGAATTTGGTCTGTATGATAACCACCTGCACAATACTCAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: LGTLYVAEHGRVHFL*NLVCMITTCTILRN Trigger: GTTTCTGAGTATTGTGCAGGTGGTTATCATACAGACCAAATTGCAAAGAAAGTGTACTCTGCCATGCTCTGCCACATATAGGGTACCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR CCA 90 bp | GAAATCGAAGCAGATCTCAGAAGATTGAAAGCTCTCCCATGCTCATaGATAGGCAGGATTAATATAGTAAAAATGGCTATCCTGCCGAAA | + |
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Preference number: 1 (lower is better) Translates to: EIEADLRRLKALPCS*IGRINIVKMAILPK Trigger: TTTCGGCAGGATAGCCATTTTTACTATATTAATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGCTTCGATTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR TCA 90 bp | ATTTTGCTCTTTGAAAATTTCCATCATATTTACCATGATGTGACCTaGGCCTTCAAGGAGGAGAATGGTCTAGGTACCCTATATGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: ILLFENFHHIYHDVT*AFKEENGLGTLYVA Trigger: TGCCACATATAGGGTACCTAGACCATTCTCCTCCTTGAAGGCTCAGGTCACATCATGGTAAATATGATGGAAATTTTCAAAGAGCAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR GCA 90 bp | TCAGCAAATGGTGCTGGCACAACTGGCAGTTATCATGCAGAAGAATaGAAATTAATCCATTCTTATCTCCTTGTACAAAGCTCAAGTCTA | + |
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Preference number: 1 (lower is better) Translates to: SANGAGTTGSYHAEE*KLIHSYLLVQSSSL Trigger: TAGACTTGAGCTTTGTACAAGGAGATAAGAATGGATTAATTTGCATTCTTCTGCATGATAACTGCCAGTTGTGCCAGCACCATTTGCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR GCA 90 bp | CAGGTCCAATATCCAAAGTGTGTGATGTCTTCAGTAAGAGAGTTTTaGCATAAATTTCTGGTTGGTAACCAAGAGCAGTGGCAAAAGTAT | + |
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Preference number: 1 (lower is better) Translates to: QVQYPKCVMSSVREF*HKFLVGNQEQWQKY Trigger: ATACTTTTGCCACTGCTCTTGGTTACCAACCAGAAATTTATGGCAAAACTCTCTTACTGAAGACATCACACACTTTGGATATTGGACCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR CCA 90 bp | AGAAGAAGGAAGACCAAAGTGTGGATACTTCATCCCTCCTTAGAATaGGGAACAAAATACCCATGTAAGGAATTACAGAGACAACATTTG | + |
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Preference number: 1 (lower is better) Translates to: RRRKTKVWILHPSLE*GTKYPCKELQRQHL Trigger: CAAATGTTGTCTCTGTAATTCCTTACATGGGTATTTTGTTCCCCATTCTAAGGAGGGATGAAGTATCCACACTTTGGTCTTCCTTCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR GCA 90 bp | AAGAAAGAAATCGAAGCAGATCTCAGAAGATTGAAAGCTCTCCCATaGTCATGGATAGGCAGGATTAATATAGTAAAAATGGCTATCCTG | + |
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Preference number: 1 (lower is better) Translates to: KKEIEADLRRLKALP*SWIGRINIVKMAIL Trigger: CAGGATAGCCATTTTTACTATATTAATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGCTTCGATTTCTTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR GCA 90 bp | TTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTGGATCAAGGAATaGCAAATAAAACCAGAGACACTAAAACTTATAGAGGAGAAAGTC | + |
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Preference number: 1 (lower is better) Translates to: FLSPCTKLKSKWIKE*QIKPETLKLIEEKV Trigger: GACTTTCTCCTCTATAAGTTTTAGTGTCTCTGGTTTTATTTGGCATTCCTTGATCCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR CCA 90 bp | ATATATATATATATTCATAGCTATATAAGTTTATTCACTAGTGCTTaGTTGACATACCCCTATGAAACCCTGCCTCTCCCTGCTCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: IYIYIHSYISLFTSA*LTYPYETLPLPAQK Trigger: CTTCTGAGCAGGGAGAGGCAGGGTTTCATAGGGGTATGTCAACCAAGCACTAGTGAATAAACTTATATAGCTATGAATATATATATATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR CAA 90 bp | GAAGATGGCCTAATTGGCCATCACTGGGAGGAGATGCCCTTGGTCTaGCAAAGATTCTATGCCCCAGTACAGGGGAATGCCAGGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: EDGLIGHHWEEMPLV*QRFYAPVQGNARAR Trigger: CCTGGCCCTGGCATTCCCCTGTACTGGGGCATAGAATCTTTGCAAGACCAAGGGCATCTCCTCCCAGTGATGGCCAATTAGGCCATCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR CAA 90 bp | GTAGCAGAAGATGGCCTAATTGGCCATCACTGGGAGGAGATGCCCTaGGTCTTGCAAAGATTCTATGCCCCAGTACAGGGGAATGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: VAEDGLIGHHWEEMP*VLQRFYAPVQGNAR Trigger: CCTGGCATTCCCCTGTACTGGGGCATAGAATCTTTGCAAGACCAAGGGCATCTCCTCCCAGTGATGGCCAATTAGGCCATCTTCTGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR CCA 90 bp | GAATTACAGAGACAACATTTGGAGCTGAGATTGAAGGAAGGACCATGCAGAGACCAGGAGTGGGTGGGTTaGGGAGCAGTTCAGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: ELQRQHLELRLKEGPCRDQEWVG*GAVQWG Trigger: CCCCCACTGAACTGCTCCCCAACCCACCCACTCCTG...GTCTCTGCATGGTCCTTCCTTCAATCTCAGCTCCAAATGTTGTCTCTGTAATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR CCA 90 bp | CAAACCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGGTCGGAAGCAGGAGTGGGTaGGTTGGGGAGCAGTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: QTKTTLRFYLTPVRMAKVGSRSG*VGEQFS Trigger: ACTGAACTGCTCCCCAACCCACCCACTCCTGCTTCC...GACCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR CAA 90 bp | GTGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTGGTGAGATaGCAAGCTTGTACCACCATCTGGAAATCAGTCTGGCAGTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: VRMWRKRNTPPLLVR*QACTTIWKSVWQFL Trigger: GAGGAACTGCCAGACTGATTTCCAGATGGTGGTACAAGCTTGCAATCTCACCAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR CAA 90 bp | CAGCAGATGCTAGTGAGGATGTGGAGAAAGAGGAACACTCCTCCATaGCTGGTGAGATTGCAAGCTTGTACCACCATCTGGAAATCAGTC | + |
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Preference number: 2 (lower is better) Translates to: QQMLVRMWRKRNTPP*LVRLQACTTIWKSV Trigger: GACTGATTTCCAGATGGTGGTACAAGCTTGCAATCTCACCAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCACTAGCATCTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCAGATCTCAGAAGATTGAAAGCTCTCCCATGCTCATGGATAGGCAGGATTCTAATTGGCCATCACTaGGAGGAGATGCCCTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: EADLRRLKALPCSWIGRILIGHH*EEMPLV Trigger: GACCAAGGGCATCTCCTCCCAGTGATGGCCAATTAG...AATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCAGATCTCAGAAGATTGAAAGCTCTCCCATGCTCATGGATAGGCAGGATTCAGTCATCCATTGTATaGAACACAGGGCCCCCAATG | + |
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Preference number: 2 (lower is better) Translates to: EADLRRLKALPCSWIGRIQSSIV*NTGPPM Trigger: CATTGGGGGCCCTGTGTTCCATACAATGGATGACTG...AATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR CCA 90 bp | CAAACCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGGTCCAGTCATCCATTGTATaGAACACAGGGCCCCCAATG | + |
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Preference number: 2 (lower is better) Translates to: QTKTTLRFYLTPVRMAKVQSSIV*NTGPPM Trigger: CATTGGGGGCCCTGTGTTCCATACAATGGATGACTG...GACCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGCAGATCTCAGAAGATTGAAAGCTCTCCCATGCTCATGGATAGGCAGGATTTTGAAAACCCAGAAATaGACCCACAGACCTGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: EADLRRLKALPCSWIGRILKTQK*THRPVV Trigger: GACCACAGGTCTGTGGGTTCATTTCTGGGTTTTCAA...AATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR CCA 90 bp | CAAACCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGGTCCCAGCAGACACACAGTaGTTATCCACCACCTATAAG | + |
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Preference number: 2 (lower is better) Translates to: QTKTTLRFYLTPVRMAKVPADTQ*LSTTYK Trigger: CTTATAGGTGGTGGATAACCACTGTGTGTCTGCTGG...GACCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGCAGATCTCAGAAGATTGAAAGCTCTCCCATGCTCATGGATAGGCAGGATTCAGGGGAAAAATTCCTaGACAGAAAGGCAATGGCTT | + |
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Preference number: 2 (lower is better) Translates to: EADLRRLKALPCSWIGRIQGKNS*TERQWL Trigger: AAGCCATTGCCTTTCTGTTCAGGAATTTTTCCCCTG...AATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR GCA 90 bp | CAAACCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGGTCGCTTGTGTCTCTAGCTaGATATGTAGCAGAAGATGG | + |
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Preference number: 2 (lower is better) Translates to: QTKTTLRFYLTPVRMAKVACVSS*ICSRRW Trigger: CCATCTTCTGCTACATATGCAGCTAGAGACACAAGC...GACCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCAGATCTCAGAAGATTGAAAGCTCTCCCATGCTCATGGATAGGCAGGATTATGCTAGTGAGGATGTaGAGAAAGAGGAACACTCCT | + |
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Preference number: 2 (lower is better) Translates to: EADLRRLKALPCSWIGRIMLVRM*RKRNTP Trigger: AGGAGTGTTCCTCTTTCTCCACATCCTCACTAGCAT...AATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGCAGATCTCAGAAGATTGAAAGCTCTCCCATGCTCATGGATAGGCAGGATTATTTTCAGCAAATGGTaGTGGCACAACTGGCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: EADLRRLKALPCSWIGRIIFSKW*WHNWQL Trigger: TAACTGCCAGTTGTGCCAGCACCATTTGCTGAAAAT...AATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR CCA 90 bp | AAAATTCCTGAACAGAAAGGCAATGGCTTATGCTCTAAGATTGAGAATCTACAAGGAAGCAGGAGTGGGTaGGTTGGGGAGCAGTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: KIPEQKGNGLCSKIENLQGSRSG*VGEQFS Trigger: ACTGAACTGCTCCCCAACCCACCCACTCCTGCTTCC...TTGTAGATTCTCAATCTTAGAGCATAAGCCATTGCCTTTCTGTTCAGGAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCAGATCTCAGAAGATTGAAAGCTCTCCCATGCTCATGGATAGGCAGGATTGGAAGAGAGGACCCTTaGTCTAGGAAACATTATATG | + |
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Preference number: 2 (lower is better) Translates to: EADLRRLKALPCSWIGRIGREDP*SRKHYM Trigger: CATATAATGTTTCCTAGACCAAGGGTCCTCTCTTCC...AATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR CAA 90 bp | AATCAGCCACCAAATACAGATACTATTGCATATGCCAGCAAGATTTaGCTGACAGGACCCTTATATAGCTGTCTCTTGGTAGGCTATGCC | + |
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Preference number: 2 (lower is better) Translates to: NQPPNTDTIAYASKI*LTGPLYSCLLVGYA Trigger: GGCATAGCCTACCAAGAGACAGCTATATAAGGGTCCTGTCAGCAAAATCTTGCTGGCATATGCAATAGTATCTGTATTTGGTGGCTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR CAA 90 bp | CTCATGCAAACAGACCTCAACTTATGGAATTTTCAAGGATTCAAATaGTTAGTTATCCTTCCCTACAACCCCACCTCTGGTCCATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: LMQTDLNLWNFQGFK*LVILPYNPTSGPCS Trigger: TGAGCATGGACCAGAGGTGGGGTTGTAGGGAAGGATAACTAACAATTTGAATCCTTGAAAATTCCATAAGTTGAGGTCTGTTTGCATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR CAA 90 bp | ACCCTATATGTGGCAGAGCATGGCAGAGTACACTTTCTTTGCAATTaGGTCTGTATGATAACCACCTGCACAATACTCAGAAACTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: TLYVAEHGRVHFLCN*VCMITTCTILRNFS Trigger: AGAGAAGTTTCTGAGTATTGTGCAGGTGGTTATCATACAGACCAAATTGCAAAGAAAGTGTACTCTGCCATGCTCTGCCACATATAGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR CAA 90 bp | TCTAGGTACCCTATATGTGGCAGAGCATGGCAGAGTACACTTTCTTaGCAATTTGGTCTGTATGATAACCACCTGCACAATACTCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: SRYPICGRAWQSTLS*QFGLYDNHLHNTQK Trigger: TTTCTGAGTATTGTGCAGGTGGTTATCATACAGACCAAATTGCAAAGAAAGTGTACTCTGCCATGCTCTGCCACATATAGGGTACCTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR TCA 90 bp | AGAATGCAAATTAATCCATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTGGAGAGTACCCAAGAGCTaGAGGGGTCTGGAACCCTAT | + |
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Preference number: 2 (lower is better) Translates to: RMQINPFLSPCTKLKSKWRVPKS*RGLEPY Trigger: ATAGGGTTCCAGACCCCTTCAGCTCTTGGGTACTCT...CCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGATTAATTTGCATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR CCA 90 bp | AAAATTCCTGAACAGAAAGGCAATGGCTTATGCTCTAAGATTGAGAATCTACAACTAATTGGCCATCACTaGGAGGAGATGCCCTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: KIPEQKGNGLCSKIENLQLIGHH*EEMPLV Trigger: GACCAAGGGCATCTCCTCCCAGTGATGGCCAATTAG...TTGTAGATTCTCAATCTTAGAGCATAAGCCATTGCCTTTCTGTTCAGGAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR CCA 90 bp | CAAACCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGGTCGTACTCACCAATAAGTaGATATTAGCCCAGAAACTT | + |
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Preference number: 2 (lower is better) Translates to: QTKTTLRFYLTPVRMAKVVLTNK*ILAQKL Trigger: AAGTTTCTGGGCTAATATCCACTTATTGGTGAGTAC...GACCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCAGATCTCAGAAGATTGAAAGCTCTCCCATGCTCATGGATAGGCAGGATTAGGTCACCAACAGATTaGGAAAGGATTTTTACCAAT | + |
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Preference number: 2 (lower is better) Translates to: EADLRRLKALPCSWIGRIRSPTD*ERIFTN Trigger: ATTGGTAAAAATCCTTTCCCAATCTGTTGGTGACCT...AATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCAGATCTCAGAAGATTGAAAGCTCTCCCATGCTCATGGATAGGCAGGATTCCATCAGATAATGTTTaGTATCTCCAGTGTATTTTC | + |
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Preference number: 2 (lower is better) Translates to: EADLRRLKALPCSWIGRIPSDNV*YLQCIF Trigger: GAAAATACACTGGAGATACCAAACATTATCTGATGG...AATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR CAA 90 bp | ATAGTTCCTCACCTCCCTCATGTTAGAACATTGACTGGCCTAATTTaGTGTGTATGTCTTATACAGGCAACCACAGATGTTTTGAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: IVPHLPHVRTLTGLI*CVCLIQATTDVLSS Trigger: TGAACTCAAAACATCTGTGGTTGCCTGTATAAGACATACACACAAAATTAGGCCAGTCAATGTTCTAACATGAGGGAGGTGAGGAACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR CAA 90 bp | AGTCATGAACTTTCAATAGTTCCTCACCTCCCTCATGTTAGAACATaGACTGGCCTAATTTTGTGTGTATGTCTTATACAGGCAACCACA | + |
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Preference number: 2 (lower is better) Translates to: SHELSIVPHLPHVRT*TGLILCVCLIQATT Trigger: TGTGGTTGCCTGTATAAGACATACACACAAAATTAGGCCAGTCAATGTTCTAACATGAGGGAGGTGAGGAACTATTGAAAGTTCATGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR GCA 90 bp | AAAATTCCTGAACAGAAAGGCAATGGCTTATGCTCTAAGATTGAGAATCTACAATCTCTTGGTAGGCTATaGCAGTGCCTGGCAAATACA | + |
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Preference number: 2 (lower is better) Translates to: KIPEQKGNGLCSKIENLQSLGRL*QCLANT Trigger: TGTATTTGCCAGGCACTGGCATAGCCTACCAAGAGA...TTGTAGATTCTCAATCTTAGAGCATAAGCCATTGCCTTTCTGTTCAGGAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR CCA 90 bp | AAAATTCCTGAACAGAAAGGCAATGGCTTATGCTCTAAGATTGAGAATCTACAACCAGCAGACACACAGTaGTTATCCACCACCTATAAG | + |
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Preference number: 2 (lower is better) Translates to: KIPEQKGNGLCSKIENLQPADTQ*LSTTYK Trigger: CTTATAGGTGGTGGATAACCACTGTGTGTCTGCTGG...TTGTAGATTCTCAATCTTAGAGCATAAGCCATTGCCTTTCTGTTCAGGAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| 3UTR-3UTR CCA 90 bp | AGAATGCAAATTAATCCATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTGGAGAAGATGGCCTAGTTaGCCATCTTTGGGAAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: RMQINPFLSPCTKLKSKWRRWPS*PSLGRE Trigger: CTCTCTTCCCAAAGATGGCCAACTAGGCCATCTTCT...CCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGATTAATTTGCATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CAA 90 bp | AACTTCAAGTCTCTGAAGAAAGAAATCGAAGCAGATCTCAGAAGATaGAAAGCTCTCCCATGCTCATGGATAGGCAGGATTAATATAGTA | + |
|
Preference number: 2 (lower is better) Translates to: NFKSLKKEIEADLRR*KALPCSWIGRINIV Trigger: TACTATATTAATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGCTTCGATTTCTTTCTTCAGAGACTTGAAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAATGCAAATTAATCCATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTGGCAGGGGAAAAATTCCTaGACAGAAAGGCAATGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: RMQINPFLSPCTKLKSKWQGKNS*TERQWL Trigger: AAGCCATTGCCTTTCTGTTCAGGAATTTTTCCCCTG...CCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGATTAATTTGCATTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAATGCAAATTAATCCATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTGGGCTTGTGTCTCTAGCTaGATATGTAGCAGAAGATGG | + |
|
Preference number: 2 (lower is better) Translates to: RMQINPFLSPCTKLKSKWACVSS*ICSRRW Trigger: CCATCTTCTGCTACATATGCAGCTAGAGACACAAGC...CCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGATTAATTTGCATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACACCATCAGATAATGTTTaGTATCTCCAGTGTATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: PRCPSTEEWIQKMWYIYTPSDNV*YLQCIF Trigger: GAAAATACACTGGAGATACCAAACATTATCTGATGG...TGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAATTCCTGAACAGAAAGGCAATGGCTTATGCTCTAAGATTGAGAATCTACAAATAATAGCCAGAAGCTaGAAAGAACCCAGATGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: KIPEQKGNGLCSKIENLQIIARS*KEPRCP Trigger: GGGACATCTGGGTTCTTTCCAGCTTCTGGCTATTAT...TTGTAGATTCTCAATCTTAGAGCATAAGCCATTGCCTTTCTGTTCAGGAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAATTCCTGAACAGAAAGGCAATGGCTTATGCTCTAAGATTGAGAATCTACAACATCCCTCCTTAGAATaGGGAACAAAATACCCATGT | + |
|
Preference number: 2 (lower is better) Translates to: KIPEQKGNGLCSKIENLQHPSLE*GTKYPC Trigger: ACATGGGTATTTTGTTCCCCATTCTAAGGAGGGATG...TTGTAGATTCTCAATCTTAGAGCATAAGCCATTGCCTTTCTGTTCAGGAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAATTCCTGAACAGAAAGGCAATGGCTTATGCTCTAAGATTGAGAATCTACAACAGCAATACCTCTCCTaGAAATATATCCAGAAGATG | + |
|
Preference number: 2 (lower is better) Translates to: KIPEQKGNGLCSKIENLQQQYLS*KYIQKM Trigger: CATCTTCTGGATATATTTCCAGGAGAGGTATTGCTG...TTGTAGATTCTCAATCTTAGAGCATAAGCCATTGCCTTTCTGTTCAGGAATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAATGCAAATTAATCCATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTGGCAGCAATACCTCTCCTaGAAATATATCCAGAAGATG | + |
|
Preference number: 2 (lower is better) Translates to: RMQINPFLSPCTKLKSKWQQYLS*KYIQKM Trigger: CATCTTCTGGATATATTTCCAGGAGAGGTATTGCTG...CCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGATTAATTTGCATTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAATTCCTGAACAGAAAGGCAATGGCTTATGCTCTAAGATTGAGAATCTACAAAAATACAGAAGTGGATaGTCACAGTCATCTATAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KIPEQKGNGLCSKIENLQKYRSG*SQSSIG Trigger: TCCTATAGATGACTGTGAGCATCCACTTCTGTATTT...TTGTAGATTCTCAATCTTAGAGCATAAGCCATTGCCTTTCTGTTCAGGAATTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAATTCCTGAACAGAAAGGCAATGGCTTATGCTCTAAGATTGAGAATCTACAAGTACTCACCAATAAGTaGATATTAGCCCAGAAACTT | + |
|
Preference number: 2 (lower is better) Translates to: KIPEQKGNGLCSKIENLQVLTNK*ILAQKL Trigger: AAGTTTCTGGGCTAATATCCACTTATTGGTGAGTAC...TTGTAGATTCTCAATCTTAGAGCATAAGCCATTGCCTTTCTGTTCAGGAATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAATTCCTGAACAGAAAGGCAATGGCTTATGCTCTAAGATTGAGAATCTACAAAAATACAGAAGTCAATaGTCACAGTCATCCATTGTA | + |
|
Preference number: 2 (lower is better) Translates to: KIPEQKGNGLCSKIENLQKYRSQ*SQSSIV Trigger: TACAATGGATGACTGTGAGCATTGACTTCTGTATTT...TTGTAGATTCTCAATCTTAGAGCATAAGCCATTGCCTTTCTGTTCAGGAATTTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAATGCAAATTAATCCATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTGGAAATACAGAAGTCAATaGTCACAGTCATCCATTGTA | + |
|
Preference number: 2 (lower is better) Translates to: RMQINPFLSPCTKLKSKWKYRSQ*SQSSIV Trigger: TACAATGGATGACTGTGAGCATTGACTTCTGTATTT...CCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGATTAATTTGCATTCT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR GCA 72 bp | GGAAACATTATATGCCTCAGTACAGGGGAAAGCCAGTaGCAGGAAGTGAAAGTGAGTGGGTATGGGAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GNIICLSTGESQ*QEVKVSGYGSR Trigger: CCTGCTCCCATACCCACTCACTTTCACTTCCTGGCACTGGCTTTCCCCTGTACTGAGGCATATAATGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR GCA 72 bp | TGGGAAGAGAGGACCCTTGGTCTAGGAAACATTATATaGCTCAGTACAGGGGAAAGCCAGTGCCAGGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: WEERTLGLGNII*LSTGESQCQEV Trigger: CACTTCCTGGCACTGGCTTTCCCCTGTACTGAGGCATATAATGTTTCCTAGACCAAGGGTCCTCTCTTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCAGATCTCAGAAGATTGAAAGCTCTCCCATGCTCATGGATAGGCAGGATTGTCTCCTGTGAGGCTTaGCCAGTGCCTGGCAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: EADLRRLKALPCSWIGRIVSCEA*PVPGKY Trigger: GTATTTGCCAGGCACTGGCAAAGCCTCACAGGAGAC...AATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CCA 72 bp | TGGCCTAGTTGGCCATCTTTGGGAAGAGAGGACCCTTaGTCTAGGAAACATTATATGCCTCAGTACAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: WPSWPSLGREDP*SRKHYMPQYRG Trigger: TCCCCTGTACTGAGGCATATAATGTTTCCTAGACCAAGGGTCCTCTCTTCCCAAAGATGGCCAACTAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CCA 72 bp | GTCTCTAGCTGCATATGTAGTAGAAGATGGCCTAGTTaGCCATCTTTGGGAAGAGAGGACCCTTGGTCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: VSSCICSRRWPS*PSLGREDPWSR Trigger: CCTAGACCAAGGGTCCTCTCTTCCCAAAGATGGCCAACTAGGCCATCTTCTACTACATATGCAGCTAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATTACAGAGACAACATTTGGAGCTGAGATTGAAGGAAGGACCATGCAGAGACGCTCACAGTCATCCATaGTATGGAACACAGGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: ELQRQHLELRLKEGPCRDAHSHP*YGTQGP Trigger: GGGGCCCTGTGTTCCATACAATGGATGACTGTGAGC...GTCTCTGCATGGTCCTTCCTTCAATCTCAGCTCCAAATGTTGTCTCTGTAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CCA 72 bp | CATGAGTGCAGAGGTCCTATCATAGCCAGTAGATACTaGCTCTGTCTGATCCTCCCTCGCATTTTGCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HECRGPIIASRY*LCLILPRILLF Trigger: AAAGAGCAAAATGCGAGGGAGGATCAGACAGAGCCAGTATCTACTGGCTATGATAGGACCTCTGCACTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAGCTCACAGTCATCCATaGTATGGAACACAGGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: PRCPSTEEWIQKMWYIYTAHSHP*YGTQGP Trigger: GGGGCCCTGTGTTCCATACAATGGATGACTGTGAGC...TGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAACCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGGTCCATTTGGAGCTGAGATaGAAGGAAGGACCATGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QTKTTLRFYLTPVRMAKVHLELR*KEGPCR Trigger: TCTGCATGGTCCTTCCTTCAATCTCAGCTCCAAATG...GACCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CCA 72 bp | GCATATGTAGCAGAAGATGGCCTAATTGGCCATCACTaGGAGGAGATGCCCTTGGTCTTGCAAAGATTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: AYVAEDGLIGHH*EEMPLVLQRFY Trigger: ATAGAATCTTTGCAAGACCAAGGGCATCTCCTCCCAGTGATGGCCAATTAGGCCATCTTCTGCTACATATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR TCA 72 bp | ACACAGACACTATCACATATGCCAGCAAGATTTTGCTaGAAGGACCCTGATATAGCTGTCTCCTGTGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TQTLSHMPARFC*KDPDIAVSCEA Trigger: AGCCTCACAGGAGACAGCTATATCAGGGTCCTTTCAGCAAAATCTTGCTGGCATATGTGATAGTGTCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR GCA 72 bp | ACCTGTCTGCCTCTGAGTTTGCTTGTTTCTGTGCAATaGTATCTGCTAACAGGTGGCCCTTTTCAACTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TCLPLSLLVSVQ*YLLTGGPFQLK Trigger: TTTGAGTTGAAAAGGGCCACCTGTTAGCAGATAGCATTGCACAGAAACAAGCAAACTCAGAGGCAGACAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAACCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGGTCACTGCTGCATTAGCATaGCACAACAGCATATACCAA | + |
|
Preference number: 3 (lower is better) Translates to: QTKTTLRFYLTPVRMAKVTAALA*HNSIYQ Trigger: TTGGTATATGCTGTTGTGCAATGCTAATGCAGCAGT...GACCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR GCA 72 bp | GTCTCAACAATAAAAGAACCTCTGGTGGAATCACCATaGCTGACCTCAAGCTGTACTACAGAACAATTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VSTIKEPLVESP*LTSSCTTEQLW Trigger: CCACAATTGTTCTGTAGTACAGCTTGAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTATTGTTGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CCA 72 bp | TTATATAGCTGTCTCTTGGTAGGCTATGCCAGTGCCTaGCAAATACAGAAGTCAATGCTCACAGTCATCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LYSCLLVGYASA*QIQKSMLTVIH Trigger: ATGGATGACTGTGAGCATTGACTTCTGTATTTGCCAGGCACTGGCATAGCCTACCAAGAGACAGCTATATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCAGATCTCAGAAGATTGAAAGCTCTCCCATGCTCATGGATAGGCAGGATTAAGGTCACCAACAGATaGGGAAAGGATTTTTACCAA | + |
|
Preference number: 3 (lower is better) Translates to: EADLRRLKALPCSWIGRIKVTNR*GKDFYQ Trigger: TTGGTAAAAATCCTTTCCCAATCTGTTGGTGACCTT...AATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR TCA 72 bp | TGTGTGTATGTCTTATACAGGCAACCACAGATGTTTTaGGTTCATGAGTGCAGAGGTCCTATCATAGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: CVYVLYRQPQMF*VHECRGPIIAS Trigger: ACTGGCTATGATAGGACCTCTGCACTCATGAACTCAAAACATCTGTGGTTGCCTGTATAAGACATACACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR GCA 72 bp | TTAGTTATCCTTCCCTACAACCCCACCTCTGGTCCATaGTCATCCATTTCTCTGATAATATGGTGGAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LVILPYNPTSGP*SSISLIIWWKT Trigger: TGTTTTCCACCATATTATCAGAGAAATGGATGAGCATGGACCAGAGGTGGGGTTGTAGGGAAGGATAACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CCA 72 bp | CAAATTGTTAGTTATCCTTCCCTACAACCCCACCTCTaGTCCATGCTCATCCATTTCTCTGATAATATGGTG | + |
|
Preference number: 3 (lower is better) Translates to: QIVSYPSLQPHL*SMLIHFSDNMV Trigger: CACCATATTATCAGAGAAATGGATGAGCATGGACCAGAGGTGGGGTTGTAGGGAAGGATAACTAACAATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CCA 72 bp | AATGACCCACGTGTGAGAACACAGGATCAGAATTCATaGGAGATAAATGACAATTCCAAGACTGCTATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: NDPRVRTQDQNS*EINDNSKTAML Trigger: CAGCATAGCAGTCTTGGAATTGTCATTTATCTCCCATGAATTCTGATCCTGTGTTCTCACACGTGGGTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCAGATCTCAGAAGATTGAAAGCTCTCCCATGCTCATGGATAGGCAGGATTTGGGACCTCATAAAATaGCAAAGCTTCTATAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: EADLRRLKALPCSWIGRIWDLIK*QSFYKT Trigger: TGTCTTATAGAAGCTTTGCAATTTTATGAGGTCCCA...AATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR GCA 72 bp | GAAGCAATCCCACTAAAATCAGGGACTAGACAATGCTaGCCACTTTCTCCCTACCTATTCAATATAGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: EAIPLKSGTRQC*PLSPYLFNIVL Trigger: AAGTACTATATTGAATAGGTAGGGAGAAAGTGGGCAGCATTGTCTAGTCCCTGATTTTAGTGGGATTGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR GCA 72 bp | CTATATGTGGCAGAGCATGGCAGAGTACACTTTCTTTaGAATTTGGTCTGTATGATAACCACCTGCACAATA | + |
|
Preference number: 3 (lower is better) Translates to: LYVAEHGRVHFL*NLVCMITTCTI Trigger: TATTGTGCAGGTGGTTATCATACAGACCAAATTGCAAAGAAAGTGTACTCTGCCATGCTCTGCCACATATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR GCA 72 bp | AGGGGAAAAATTCCTGAACAGAAAGGCAATGGCTTATaGTCTAAGATTGAGAATCTACAAATGGGACCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: RGKIPEQKGNGL*SKIENLQMGPH Trigger: ATGAGGTCCCATTTGTAGATTCTCAATCTTAGAGCATAAGCCATTGCCTTTCTGTTCAGGAATTTTTCCCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR GCA 72 bp | TTTGAAGCAATCCCACTAAAATCAGGGACTAGACAATaGTGCCCACTTTCTCCCTACCTATTCAATATAGTA | + |
|
Preference number: 3 (lower is better) Translates to: FEAIPLKSGTRQ*CPLSPYLFNIV Trigger: TACTATATTGAATAGGTAGGGAGAAAGTGGGCAGCATTGTCTAGTCCCTGATTTTAGTGGGATTGCTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR GCA 72 bp | TATCCAAAGTGTGTGATGTCTTCAGTAAGAGAGTTTTaGCATAAATTTCTGGTTGGTAACCAAGAGCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: YPKCVMSSVREF*HKFLVGNQEQW Trigger: CCACTGCTCTTGGTTACCAACCAGAAATTTATGGCAAAACTCTCTTACTGAAGACATCACACACTTTGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CCA 72 bp | GCAGATCTCAGAAGATTGAAAGCTCTCCCATGCTCATaGATAGGCAGGATTAATATAGTAAAAATGGCTATC | + |
|
Preference number: 3 (lower is better) Translates to: ADLRRLKALPCS*IGRINIVKMAI Trigger: GATAGCCATTTTTACTATATTAATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR GCA 72 bp | ATCGAAGCAGATCTCAGAAGATTGAAAGCTCTCCCATaGTCATGGATAGGCAGGATTAATATAGTAAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: IEADLRRLKALP*SWIGRINIVKM Trigger: CATTTTTACTATATTAATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGCTTCGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CCA 72 bp | AATTTCAGAGCATCCAACATGTTCTTCTCGCCAATGTaGGTACTAGACATGCATGTTTTGTACACACATATA | + |
|
Preference number: 3 (lower is better) Translates to: NFRASNMFFSPM*VLDMHVLYTHI Trigger: TATATGTGTGTACAAAACATGCATGTCTAGTACCCACATTGGCGAGAAGAACATGTTGGATGCTCTGAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CCA 72 bp | ATTAAAAAGAATGAATTTATAAAATTCCTAGGCAAATaGATGGACCTGGAGGGCCTCATCCTGAGTGAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: IKKNEFIKFLGK*MDLEGLILSEV Trigger: TACCTCACTCAGGATGAGGCCCTCCAGGTCCATCCATTTGCCTAGGAATTTTATAAATTCATTCTTTTTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CCA 72 bp | GACACTGTCAATAAGACAAAAAGGTCACCAACAGATTaGGAAAGGATTTTTACCAATCCTAAATCCAGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: DTVNKTKRSPTD*ERIFTNPKSSR Trigger: CCTACTGGATTTAGGATTGGTAAAAATCCTTTCCCAATCTGTTGGTGACCTTTTTGTCTTATTGACAGTGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CCA 72 bp | TATATTCATAGCTATATAAGTTTATTCACTAGTGCTTaGTTGACATACCCCTATGAAACCCTGCCTCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: YIHSYISLFTSA*LTYPYETLPLP Trigger: AGGGAGAGGCAGGGTTTCATAGGGGTATGTCAACCAAGCACTAGTGAATAAACTTATATAGCTATGAATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR GCA 72 bp | CCTTGTACAAAGCTCAAGTCTAAGTGGATCAAGGAATaGCAAATAAAACCAGAGACACTAAAACTTATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PCTKLKSKWIKE*QIKPETLKLIE Trigger: CTCTATAAGTTTTAGTGTCTCTGGTTTTATTTGGCATTCCTTGATCCACTTAGACTTGAGCTTTGTACAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR GCA 72 bp | GTCTTAGTAAAGTGCAACCATGAATTTACTTTTTGTTaGCATAGCTCTAATTTTGCTACTGAGTGGTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: VLVKCNHEFTFC*HSSNFATEWSL Trigger: GAGTGACCACTCAGTAGCAAAATTAGAGCTATGGCAACAAAAAGTAAATTCATGGTTGCACTTTACTAAGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAATGCAAATTAATCCATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTGGGCTTATGCTCTAAGATaGAGAATCTACAAATGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: RMQINPFLSPCTKLKSKWAYALR*RIYKWD Trigger: GTCCCATTTGTAGATTCTCAATCTTAGAGCATAAGC...CCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGATTAATTTGCATTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAATGCAAATTAATCCATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTGGTGGGACCTCATAAAATaGCAAAGCTTCTATAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: RMQINPFLSPCTKLKSKWWDLIK*QSFYKT Trigger: TGTCTTATAGAAGCTTTGCAATTTTATGAGGTCCCA...CCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGATTAATTTGCATTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CAA 72 bp | GATGGCCTAATTGGCCATCACTGGGAGGAGATGCCCTaGGTCTTGCAAAGATTCTATGCCCCAGTACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DGLIGHHWEEMP*VLQRFYAPVQG Trigger: CCCCTGTACTGGGGCATAGAATCTTTGCAAGACCAAGGGCATCTCCTCCCAGTGATGGCCAATTAGGCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CAA 72 bp | CTAATTGGCCATCACTGGGAGGAGATGCCCTTGGTCTaGCAAAGATTCTATGCCCCAGTACAGGGGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIGHHWEEMPLV*QRFYAPVQGNA Trigger: GGCATTCCCCTGTACTGGGGCATAGAATCTTTGCAAGACCAAGGGCATCTCCTCCCAGTGATGGCCAATTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR TCA 90 bp | CAAACCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGGTCCACCATGGAGACACTTaGGCCAGCCATGAGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QTKTTLRFYLTPVRMAKVHHGDT*ASHETQ Trigger: CTGGGTCTCATGGCTGGCTCAAGTGTCTCCATGGTG...GACCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CAA 72 bp | GAGGAACACTCCTCCATTGCTGGTGAGATTGCAAGCTaGTACCACCATCTGGAAATCAGTCTGGCAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EEHSSIAGEIAS*YHHLEISLAVP Trigger: AGGAACTGCCAGACTGATTTCCAGATGGTGGTACAAGCTTGCAATCTCACCAGCAATGGAGGAGTGTTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CAA 72 bp | CTAGTGAGGATGTGGAGAAAGAGGAACACTCCTCCATaGCTGGTGAGATTGCAAGCTTGTACCACCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVRMWRKRNTPP*LVRLQACTTIW Trigger: CCAGATGGTGGTACAAGCTTGCAATCTCACCAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCACTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR TCA 90 bp | CAAACCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGGTCCACAAGCCAACTGATTaGGCAGGAGGAACCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QTKTTLRFYLTPVRMAKVHKPTD*AGGTKV Trigger: TACTTTGGTTCCTCCTGCTCAATCAGTTGGCTTGTG...GACCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR CCA 90 bp | CAAACCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGGTCAGAGAATACTCACCATaGAGACACTTGAGCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTKTTLRFYLTPVRMAKVREYSP*RHLSQP Trigger: TGGCTGGCTCAAGTGTCTCCATGGTGAGTATTCTCT...GACCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CAA 72 bp | AAGATTTTGCTGACAGGACCCTTATATAGCTGTCTCTaGGTAGGCTATGCCAGTGCCTGGCAAATACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KILLTGPLYSCL*VGYASAWQIQK Trigger: CTTCTGTATTTGCCAGGCACTGGCATAGCCTACCAAGAGACAGCTATATAAGGGTCCTGTCAGCAAAATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CAA 72 bp | CTTCCTTCTCACTACAAGACCTGTCTGCCTCTGAGTTaGCTTGTTTCTGTGCAATGCTATCTGCTAACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPSHYKTCLPLS*LVSVQCYLLTG Trigger: ACCTGTTAGCAGATAGCATTGCACAGAAACAAGCAAACTCAGAGGCAGACAGGTCTTGTAGTGAGAAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR TCA 90 bp | GAAGCAGATCTCAGAAGATTGAAAGCTCTCCCATGCTCATGGATAGGCAGGATTAAGTCAAGTGCTCTATaGTCAGGTCTTTGGGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: EADLRRLKALPCSWIGRIKSSAL*SGLWAL Trigger: TAATGCCCAAAGACCTGATCATAGAGCACTTGACTT...AATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR TCA 90 bp | CAAACCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGGTCGAATGCCTTTTGAGATaGTACACAGGCAATTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QTKTTLRFYLTPVRMAKVECLLR*YTGNWQ Trigger: TTGCCAATTGCCTGTGTATCATCTCAAAAGGCATTC...GACCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR TCA 90 bp | GAAGCAGATCTCAGAAGATTGAAAGCTCTCCCATGCTCATGGATAGGCAGGATTCTGTGGAATGCCTTTTaGGATGATACACAGGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: EADLRRLKALPCSWIGRILWNAF*DDTQAI Trigger: AATTGCCTGTGTATCATCTCAAAAGGCATTCCACAG...AATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACACACAAGCCAACTGATTaGGCAGGAGGAACCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PRCPSTEEWIQKMWYIYTHKPTD*AGGTKV Trigger: TACTTTGGTTCCTCCTGCTCAATCAGTTGGCTTGTG...TGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR TCA 90 bp | AGAATGCAAATTAATCCATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTGGCACCATGGAGACACTTaGGCCAGCCATGAGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RMQINPFLSPCTKLKSKWHHGDT*ASHETQ Trigger: CTGGGTCTCATGGCTGGCTCAAGTGTCTCCATGGTG...CCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGATTAATTTGCATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR GCA 90 bp | CAAACCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGGTCGGGGCTGATTGTGATTaGTTGGAAACAACTCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QTKTTLRFYLTPVRMAKVGADCD*LETTQK Trigger: CTTTTGAGTTGTTTCCAAGCAATCACAATCAGCCCC...GACCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CAA 72 bp | TGCATATGTAGTAGAAGATGGCCTAGTTGGCCATCTTaGGGAAGAGAGGACCCTTGGTCTAGGAAACATTAT | + |
|
Preference number: 4 (lower is better) Translates to: CICSRRWPSWPS*GREDPWSRKHY Trigger: ATAATGTTTCCTAGACCAAGGGTCCTCTCTTCCCAAAGATGGCCAACTAGGCCATCTTCTACTACATATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CAA 72 bp | GTGGCAGAGCATGGCAGAGTACACTTTCTTTGCAATTaGGTCTGTATGATAACCACCTGCACAATACTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VAEHGRVHFLCN*VCMITTCTILR Trigger: TCTGAGTATTGTGCAGGTGGTTATCATACAGACCAAATTGCAAAGAAAGTGTACTCTGCCATGCTCTGCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR TCA 90 bp | GAATTACAGAGACAACATTTGGAGCTGAGATTGAAGGAAGGACCATGCAGAGACCACTGTGGATATGCTTaGCTCGTTTCTTATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ELQRQHLELRLKEGPCRDHCGYA*LVSYVC Trigger: ACAGACATAAGAAACGAGTCAAGCATATCCACAGTG...GTCTCTGCATGGTCCTTCCTTCAATCTCAGCTCCAAATGTTGTCTCTGTAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR TCA 90 bp | CAAACCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGGTCACTTTTAAAAAGTGCTaGGCACTGTGGATATGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QTKTTLRFYLTPVRMAKVTFKKC*ALWICL Trigger: CAAGCATATCCACAGTGCTCAGCACTTTTTAAAAGT...GACCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAGAATGCCTTTTGAGATaGTACACAGGCAATTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PRCPSTEEWIQKMWYIYTECLLR*YTGNWQ Trigger: TTGCCAATTGCCTGTGTATCATCTCAAAAGGCATTC...TGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CAA 72 bp | CACCTCCCTCATGTTAGAACATTGACTGGCCTAATTTaGTGTGTATGTCTTATACAGGCAACCACAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: HLPHVRTLTGLI*CVCLIQATTDV Trigger: AACATCTGTGGTTGCCTGTATAAGACATACACACAAAATTAGGCCAGTCAATGTTCTAACATGAGGGAGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CAA 72 bp | ATTCATAGCTATATAAGTTTATTCACTAGTGCTTGGTaGACATACCCCTATGAAACCCTGCCTCTCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IHSYISLFTSAW*TYPYETLPLPA Trigger: AGCAGGGAGAGGCAGGGTTTCATAGGGGTATGTCAACCAAGCACTAGTGAATAAACTTATATAGCTATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAACTTTTAAAAAGTGCTaGGCACTGTGGATATGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PRCPSTEEWIQKMWYIYTTFKKC*ALWICL Trigger: CAAGCATATCCACAGTGCTCAGCACTTTTTAAAAGT...TGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR GCA 90 bp | GAATTACAGAGACAACATTTGGAGCTGAGATTGAAGGAAGGACCATGCAGAGACATAGTATTAAGGAATTaGCAAACATTCCCACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELQRQHLELRLKEGPCRDIVLRN*QTFPLS Trigger: TGACAGTGGGAATGTTTGGCAATTCCTTAATACTAT...GTCTCTGCATGGTCCTTCCTTCAATCTCAGCTCCAAATGTTGTCTCTGTAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CAA 72 bp | ACAGACCTCAACTTATGGAATTTTCAAGGATTCAAATaGTTAGTTATCCTTCCCTACAACCCCACCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TDLNLWNFQGFK*LVILPYNPTSG Trigger: ACCAGAGGTGGGGTTGTAGGGAAGGATAACTAACAATTTGAATCCTTGAAAATTCCATAAGTTGAGGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATAGTATTAAGGAATTaGCAAACATTCCCACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PRCPSTEEWIQKMWYIYTIVLRN*QTFPLS Trigger: TGACAGTGGGAATGTTTGGCAATTCCTTAATACTAT...TGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CAA 72 bp | AGTAGATACTGGCTCTGTCTGATCCTCCCTCGCATTTaGCTCTTTGAAAATTTCCATCATATTTACCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRYWLCLILPRI*LFENFHHIYHD Trigger: ATCATGGTAAATATGATGGAAATTTTCAAAGAGCAAAATGCGAGGGAGGATCAGACAGAGCCAGTATCTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CAA 72 bp | CTTTCAATAGTTCCTCACCTCCCTCATGTTAGAACATaGACTGGCCTAATTTTGTGTGTATGTCTTATACAG | + |
|
Preference number: 4 (lower is better) Translates to: LSIVPHLPHVRT*TGLILCVCLIQ Trigger: CTGTATAAGACATACACACAAAATTAGGCCAGTCAATGTTCTAACATGAGGGAGGTGAGGAACTATTGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR TCA 90 bp | AGAATGCAAATTAATCCATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTGGAAGTCAAGTGCTCTATaGTCAGGTCTTTGGGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: RMQINPFLSPCTKLKSKWKSSAL*SGLWAL Trigger: TAATGCCCAAAGACCTGATCATAGAGCACTTGACTT...CCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGATTAATTTGCATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR TCA 90 bp | AGAATGCAAATTAATCCATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTGGCACTGTGGATATGCTTaGCTCGTTTCTTATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RMQINPFLSPCTKLKSKWHCGYA*LVSYVC Trigger: ACAGACATAAGAAACGAGTCAAGCATATCCACAGTG...CCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGATTAATTTGCATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR GCA 90 bp | AAAATTCCTGAACAGAAAGGCAATGGCTTATGCTCTAAGATTGAGAATCTACAAGGGGCTGATTGTGATTaGTTGGAAACAACTCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KIPEQKGNGLCSKIENLQGADCD*LETTQK Trigger: CTTTTGAGTTGTTTCCAAGCAATCACAATCAGCCCC...TTGTAGATTCTCAATCTTAGAGCATAAGCCATTGCCTTTCTGTTCAGGAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CAA 72 bp | TTCCTGAACAGAAAGGCAATGGCTTATGCTCTAAGATaGAGAATCTACAAATGGGACCTCATAAAATTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLNRKAMAYALR*RIYKWDLIKLQ Trigger: TTGCAATTTTATGAGGTCCCATTTGTAGATTCTCAATCTTAGAGCATAAGCCATTGCCTTTCTGTTCAGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR GCA 90 bp | AGAATGCAAATTAATCCATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTGGGTGCAGTTGCAAAATTaGTTAAGGAGAACCATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RMQINPFLSPCTKLKSKWVQLQN*LRRTMN Trigger: GTTCATGGTTCTCCTTAAGCAATTTTGCAACTGCAC...CCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGATTAATTTGCATTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR GCA 90 bp | AAAATTCCTGAACAGAAAGGCAATGGCTTATGCTCTAAGATTGAGAATCTACAAGTGCAGTTGCAAAATTaGTTAAGGAGAACCATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KIPEQKGNGLCSKIENLQVQLQN*LRRTMN Trigger: GTTCATGGTTCTCCTTAAGCAATTTTGCAACTGCAC...TTGTAGATTCTCAATCTTAGAGCATAAGCCATTGCCTTTCTGTTCAGGAATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CAA 72 bp | ACCATGAATTTACTTTTTGTTGCCATAGCTCTAATTTaGCTACTGAGTGGTCACTCAAGTCCTAAATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TMNLLFVAIALI*LLSGHSSPKSI Trigger: AATGGATTTAGGACTTGAGTGACCACTCAGTAGCAAAATTAGAGCTATGGCAACAAAAAGTAAATTCATGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| 3UTR CAA 72 bp | ATATTATCAGAATGTTTTGGGAAGGAAGAGAATTCTTaGTACTTAACAGCACTAACTGTTCTTCCAGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ILSECFGKEENS*YLTALTVLPEV Trigger: TACCTCTGGAAGAACAGTTAGTGCTGTTAAGTACAAAGAATTCTCTTCCTTCCCAAAACATTCTGATAATAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR GCA 90 bp | AGAATGCAAATTAATCCATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTGGATATTTAGAAACAAGTaGACAAGCCAACTGATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RMQINPFLSPCTKLKSKWIFRNK*TSQLIE Trigger: CTCAATCAGTTGGCTTGTGCACTTGTTTCTAAATAT...CCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGATTAATTTGCATTCT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS GCA 90 bp | CTAGGGCCTGACACTCTTGCTGGTGTCAGGATATTTAGAAACAAGTaGACAAGCCAACTGATTGAGCAGGAGGAACCAAAGTACTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGPDTLAGVRIFRNK*TSQLIEQEEPKYLV Trigger: CACCAAGTACTTTGGTTCCTCCTGCTCAATCAGTTGGCTTGTGCACTTGTTTCTAAATATCCTGACACCAGCAAGAGTGTCAGGCCCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058772.2 ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR CAA 90 bp | CAAACCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGGTCATCATCCATCTGGAGTaGCTGGGGCTGATTGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: QTKTTLRFYLTPVRMAKVIIHLE*LGLIVI Trigger: AATCACAATCAGCCCCAGCAACTCCAGATGGATGAT...GACCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCAGATCTCAGAAGATTGAAAGCTCTCCCATGCTCATGGATAGGCAGGATTAATAGTATTAAGGAATaGCCAAACATTCCCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EADLRRLKALPCSWIGRINSIKE*PNIPTV Trigger: GACAGTGGGAATGTTTGGCAATTCCTTAATACTATT...AATCCTGCCTATCCATGAGCATGGGAGAGCTTTCAATCTTCTGAGATCTGCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR CAA 90 bp | GAATTACAGAGACAACATTTGGAGCTGAGATTGAAGGAAGGACCATGCAGAGACAATAGTATTAAGGAATaGCCAAACATTCCCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ELQRQHLELRLKEGPCRDNSIKE*PNIPTV Trigger: GACAGTGGGAATGTTTGGCAATTCCTTAATACTATT...GTCTCTGCATGGTCCTTCCTTCAATCTCAGCTCCAAATGTTGTCTCTGTAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
||
| CDS-3UTR CAA 90 bp | AAAATTCCTGAACAGAAAGGCAATGGCTTATGCTCTAAGATTGAGAATCTACAAATCATCCATCTGGAGTaGCTGGGGCTGATTGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: KIPEQKGNGLCSKIENLQIIHLE*LGLIVI Trigger: AATCACAATCAGCCCCAGCAACTCCAGATGGATGAT...TTGTAGATTCTCAATCTTAGAGCATAAGCCATTGCCTTTCTGTTCAGGAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| CDS-3UTR CAA 90 bp | AGAATGCAAATTAATCCATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTGGGCCCTAGACTTCATGTaGCTGATAAGAACAAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: RMQINPFLSPCTKLKSKWALDFM*LIRTKG Trigger: TCCCTTTGTTCTTATCAGCAACATGAAGTCTAGGGC...CCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGGATTAATTTGCATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| CDS TCA 72 bp | CTTATGTCTGTAGAGAATACTCACCATGGAGACACTTaGGCCAGCCATGAGACCCAGACACAGTCCATCAGA | + |
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Preference number: 6 (lower is better) Translates to: LMSVENTHHGDT*ASHETQTQSIR Trigger: TCTGATGGACTGTGTCTGGGTCTCATGGCTGGCTCAAGTGTCTCCATGGTGAGTATTCTCTACAGACATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058772.2 ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| CDS CAA 90 bp | AACAAGTGCACAAGCCAACTGATTGAGCAGGAGGAACCAAAGTACTaGGTGGCTCTGTATTTAAACATCATCCATCTGGAGTTGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: NKCTSQLIEQEEPKY*VALYLNIIHLELLG Trigger: CCCCAGCAACTCCAGATGGATGATGTTTAAATACAGAGCCACCAAGTACTTTGGTTCCTCCTGCTCAATCAGTTGGCTTGTGCACTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058772.2 ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| CDS GCA 72 bp | GACACTCTTGCTGGTGTCAGGATATTTAGAAACAAGTaGACAAGCCAACTGATTGAGCAGGAGGAACCAAAG | + |
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Preference number: 6 (lower is better) Translates to: DTLAGVRIFRNK*TSQLIEQEEPK Trigger: CTTTGGTTCCTCCTGCTCAATCAGTTGGCTTGTGCACTTGTTTCTAAATATCCTGACACCAGCAAGAGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058772.2 ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| CDS CAA 72 bp | ACAAGCCAACTGATTGAGCAGGAGGAACCAAAGTACTaGGTGGCTCTGTATTTAAACATCATCCATCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: TSQLIEQEEPKY*VALYLNIIHLE Trigger: CTCCAGATGGATGATGTTTAAATACAGAGCCACCAAGTACTTTGGTTCCTCCTGCTCAATCAGTTGGCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058772.2 ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| CDS TCA 72 bp | CGTAATCTGACAGTGTCTGTGGAATGCCTTTTGAGATaGTACACAGGCAATTGGCAAAAGTCAAGTGCTCTA | + |
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Preference number: 6 (lower is better) Translates to: RNLTVSVECLLR*YTGNWQKSSAL Trigger: TAGAGCACTTGACTTTTGCCAATTGCCTGTGTATCATCTCAAAAGGCATTCCACAGACACTGTCAGATTACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058772.2 ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| CDS TCA 72 bp | GTGGCTCTCTCTTCAGGAGAGACTTTTAAAAAGTGCTaGGCACTGTGGATATGCTTGACTCGTTTCTTATGT | + |
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Preference number: 6 (lower is better) Translates to: VALSSGETFKKC*ALWICLTRFLC Trigger: ACATAAGAAACGAGTCAAGCATATCCACAGTGCTCAGCACTTTTTAAAAGTCTCTCCTGAAGAGAGAGCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058772.2 ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| CDS CAA 72 bp | GTCTGTGGAATGCCTTTTGAGATGATACACAGGCAATaGGCAAAAGTCAAGTGCTCTATGATCAGGTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: VCGMPFEMIHRQ*AKVKCSMIRSL Trigger: CAAAGACCTGATCATAGAGCACTTGACTTTTGCCAATTGCCTGTGTATCATCTCAAAAGGCATTCCACAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058772.2 ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| CDS CAA 72 bp | AAGCAGGGTAAAAACACACTGGCCCTAGACTTCATGTaGCTGATAAGAACAAAGGGACAACATATGGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: KQGKNTLALDFM*LIRTKGQHMGK Trigger: CTTTCCCATATGTTGTCCCTTTGTTCTTATCAGCAACATGAAGTCTAGGGCCAGTGTGTTTTTACCCTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058772.2 ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| CDS CAA 90 bp | CTCTTACAAAAGCAGGGTAAAAACACACTGGCCCTAGACTTCATGTaGCTGATAAGAACAAAGGGACAACATATGGGAAAGCATATTTCT | + |
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Preference number: 6 (lower is better) Translates to: LLQKQGKNTLALDFM*LIRTKGQHMGKHIS Trigger: AGAAATATGCTTTCCCATATGTTGTCCCTTTGTTCTTATCAGCAACATGAAGTCTAGGGCCAGTGTGTTTTTACCCTGCTTTTGTAAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058772.2 ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| CDS TCA 72 bp | AGACTTTTAAAAAGTGCTGAGCACTGTGGATATGCTTaGCTCGTTTCTTATGTCTGTAGAGAATACTCACCA | + |
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Preference number: 6 (lower is better) Translates to: RLLKSAEHCGYA*LVSYVCREYSP Trigger: TGGTGAGTATTCTCTACAGACATAAGAAACGAGTCAAGCATATCCACAGTGCTCAGCACTTTTTAAAAGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058772.2 ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| CDS GCA 72 bp | TTTGAGATGATACACAGGCAATTGGCAAAAGTCAAGTaGTCTATGATCAGGTCTTTGGGCATTAAATGTTTT | + |
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Preference number: 6 (lower is better) Translates to: FEMIHRQLAKVK*SMIRSLGIKCF Trigger: AAAACATTTAATGCCCAAAGACCTGATCATAGAGCACTTGACTTTTGCCAATTGCCTGTGTATCATCTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058772.2 ENSMUST00000226300.2 ENSMUST00000226947.2 |
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| CDS CAA 72 bp | CAATTGGCAAAAGTCAAGTGCTCTATGATCAGGTCTTaGGGCATTAAATGTTTTCCAGTGAGTTTCAATATG | + |
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Preference number: 6 (lower is better) Translates to: QLAKVKCSMIRS*GIKCFPVSFNM Trigger: CATATTGAAACTCACTGGAAAACATTTAATGCCCAAAGACCTGATCATAGAGCACTTGACTTTTGCCAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058772.2 ENSMUST00000226300.2 ENSMUST00000226947.2 |
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