Pregenerated sensors for VMN1R75 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043308Ensembl transcript IDs: ENSMUST00000057229.2, ENSMUST00000226622.2, ENSMUST00000226855.2, ENSMUST00000227611.2, ENSMUST00000228268.2, ENSMUST00000228463.2, ENSMUST00000228646.2
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATACCAGGTACACTGATTCCAAATATTCTGAGAAGCAGCCGTATTaGCTTCCAGGTGCCTGTACAAGACTGCACTACCACCAATATTGG | + |
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Preference number: 1 (lower is better) Translates to: YTRYTDSKYSEKQPY*LPGACTRLHYHQYW Trigger: CCAATATTGGTGGTAGTGCAGTCTTGTACAGGCACCTGGAAGTCAATACGGCTGCTTCTCAGAATATTTGGAATCAGTGTACCTGGTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR GCA 90 bp | GTTATGACATTGTTATGTGTCATTGTGATACCTGGACTCAGGGCCTaGAGACCTCACCTCATCCTTTTTCAGTATGTGACAATGGTGAAG | + |
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Preference number: 1 (lower is better) Translates to: VMTLLCVIVIPGLRA*RPHLILFQYVTMVK Trigger: CTTCACCATTGTCACATACTGAAAAAGGATGAGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTCATAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR TCA 90 bp | GTGGTTAATATGGGAGGAAATGTAGATGCTAACCATAGTGACATTTaGGATGATGGCCGGGATTCTCCACATTTCATAGCTTTCCCTTGC | + |
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Preference number: 1 (lower is better) Translates to: VVNMGGNVDANHSDI*DDGRDSPHFIAFPC Trigger: GCAAGGGAAAGCTATGAAATGTGGAGAATCCCGGCCATCATCTCAAATGTCACTATGGTTAGCATCTACATTTCCTCCCATATTAACCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR CCA 90 bp | TTTGGAGAAGTCAGTTATGACATTGTTATGTGTCATTGTGATACCTaGACTCAGGGCCTGCAGACCTCACCTCATCCTTTTTCAGTATGT | + |
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Preference number: 1 (lower is better) Translates to: FGEVSYDIVMCHCDT*TQGLQTSPHPFSVC Trigger: ACATACTGAAAAAGGATGAGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTCATAACTGACTTCTCCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR CCA 90 bp | GGTGTAAGTGGATCTTACTGGCTGGATCTGTCCATATCAGATAGCTaGCAGCATTGCTTTTCTATGAATCGTGTGATTTTCACATGTGAT | + |
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Preference number: 1 (lower is better) Translates to: GVSGSYWLDLSISDS*QHCFSMNRVIFTCD Trigger: ATCACATGTGAAAATCACACGATTCATAGAAAAGCAATGCTGCCAGCTATCTGATATGGACAGATCCAGCCAGTAAGATCCACTTACACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR CCA 90 bp | GCATTTCATCCACTAAGTGCATATAGTAACTCAGTGTCAGCTACTTaGGCAACTGGCTTGTTTGTGTTTAAGACATTTCCTCTTCTCACT | + |
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Preference number: 1 (lower is better) Translates to: AFHPLSAYSNSVSAT*ATGLFVFKTFPLLT Trigger: AGTGAGAAGAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGACACTGAGTTACTATATGCACTTAGTGGATGAAATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR GCA 90 bp | TGCTTTTCTATGAATCGTGTGATTTTCACATGTGATTTAAATCCTTaGCATCACTCAGGGAATGCCTTCTCTCATAAAGTCAGAAATTGT | + |
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Preference number: 1 (lower is better) Translates to: CFSMNRVIFTCDLNP*HHSGNAFSHKVRNC Trigger: ACAATTTCTGACTTTATGAGAGAAGGCATTCCCTGAGTGATGGCAAGGATTTAAATCACATGTGAAAATCACACGATTCATAGAAAAGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACTGTCATTGTGATACCTaGACTCAGGGCCTGCAGACC | + |
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Preference number: 2 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYCHCDT*TQGLQT Trigger: GGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACA...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CCA 90 bp | GACATTGTTATGTGTCATTGTGATACCTGGACTCAGGGCCTGCAGACCTCACCTTCAGAAGCCTTCAGTTaGGTAACTGAGTGTGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: DIVMCHCDTWTQGLQTSPSEAFS*VTECGL Trigger: CAGACCACACTCAGTTACCCAACTGAAGGCTTCTGA...AGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR TCA 90 bp | GACATTGTTATGTGTCATTGTGATACCTGGACTCAGGGCCTGCAGACCTCACCTCAGGCAACAGGAGTTTaGTGTTTTGTGTCCTCACTT | + |
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Preference number: 2 (lower is better) Translates to: DIVMCHCDTWTQGLQTSPQATGV*CFVSSL Trigger: AAGTGAGGACACAAAACATCAAACTCCTGTTGCCTG...AGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR TCA 90 bp | GACATTGTTATGTGTCATTGTGATACCTGGACTCAGGGCCTGCAGACCTCACCTAACCATAGTGACATTTaGGATGATGGCCGGGATTCT | + |
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Preference number: 2 (lower is better) Translates to: DIVMCHCDTWTQGLQTSPNHSDI*DDGRDS Trigger: AGAATCCCGGCCATCATCTCAAATGTCACTATGGTT...AGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACCAGGCAACAGGAGTTTaGTGTTTTGTGTCCTCACTT | + |
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Preference number: 2 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYQATGV*CFVSSL Trigger: AAGTGAGGACACAAAACATCAAACTCCTGTTGCCTG...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGAACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAAACCATAGTGACATTTaGGATGATGGCCGGGATTCT | + |
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Preference number: 2 (lower is better) Translates to: GRNMRTDAQARDQVQGLRNHSDI*DDGRDS Trigger: AGAATCCCGGCCATCATCTCAAATGTCACTATGGTT...TCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTTCCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR GCA 90 bp | GACATTGTTATGTGTCATTGTGATACCTGGACTCAGGGCCTGCAGACCTCACCTTTCATAGCTTTCCCTTaGTATGATGACCTGTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: DIVMCHCDTWTQGLQTSPFIAFP*YDDLCQ Trigger: CTGACACAGGTCATCATAGCAAGGGAAAGCTATGAA...AGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACGAGGATTGTTTCCATTaGTGGTTATCCTTGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYEDCFH*WLSLPA Trigger: TGCTGGCAAGGATAACCAGCAATGGAAACAATCCTC...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACGTATTGACTTCCAGGTaGCTGTACAAGACTGCACTA | + |
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Preference number: 2 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYVLTSR*LYKTAL Trigger: TAGTGCAGTCTTGTACAGGCACCTGGAAGTCAATAC...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CCA 90 bp | GACATTGTTATGTGTCATTGTGATACCTGGACTCAGGGCCTGCAGACCTCACCTGTAAGTGGATCTTACTaGCTGGATCTGTCCATATCA | + |
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Preference number: 2 (lower is better) Translates to: DIVMCHCDTWTQGLQTSPVSGSY*LDLSIS Trigger: TGATATGGACAGATCCAGCCAGTAAGATCCACTTAC...AGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR TCA 90 bp | AACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAGAGTTGCAGGCAACAGGAGTTTaGTGTTTTGTGTCCTCACTT | + |
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Preference number: 2 (lower is better) Translates to: NMRTDAQARDQVQGLRELQATGV*CFVSSL Trigger: AAGTGAGGACACAAAACATCAAACTCCTGTTGCCTG...CAACTCTCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACTTCATAGCTTTCCCTTaGTATGATGACCTGTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYFIAFP*YDDLCQ Trigger: CTGACACAGGTCATCATAGCAAGGGAAAGCTATGAA...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAGGAACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGATTCATAGCTTTCCCTTaGTATGATGACCTGTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: GRNMRTDAQARDQVQGLRFIAFP*YDDLCQ Trigger: CTGACACAGGTCATCATAGCAAGGGAAAGCTATGAA...TCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTTCCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACAGACTCAAGGTGATTTaGTGGAAGGAACATGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYRLKVI*WKEHEN Trigger: GTTCTCATGTTCCTTCCAGCAAATCACCTTGAGTCT...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR CAA 90 bp | TCCCTTGCTATGATGACCTGTGTCAGGCAACAGGAGTTTGATGTTTaGTGTCCTCACTTCCACTGTGTCTTAGTTACTACAATAACAGGG | + |
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Preference number: 2 (lower is better) Translates to: SLAMMTCVRQQEFDV*CPHFHCVLVTTITG Trigger: CCCTGTTATTGTAGTAACTAAGACACAGTGGAAGTGAGGACACAAAACATCAAACTCCTGTTGCCTGACACAGGTCATCATAGCAAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR TCA 90 bp | GACATTGTTATGTGTCATTGTGATACCTGGACTCAGGGCCTGCAGACCTCACCTATGAGGATAAAGCAATaGCACCTAGTGAGAATTCAA | + |
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Preference number: 2 (lower is better) Translates to: DIVMCHCDTWTQGLQTSPMRIKQ*HLVRIQ Trigger: TTGAATTCTCACTAGGTGTCATTGCTTTATCCTCAT...AGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACCACTACCACCAATATTaGAGGATTGTTTCCATTGCT | + |
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Preference number: 2 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYHYHQY*RIVSIA Trigger: AGCAATGGAAACAATCCTCCAATATTGGTGGTAGTG...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACATGAGGATAAAGCAATaGCACCTAGTGAGAATTCAA | + |
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Preference number: 2 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYMRIKQ*HLVRIQ Trigger: TTGAATTCTCACTAGGTGTCATTGCTTTATCCTCAT...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CCA 90 bp | GACATTGTTATGTGTCATTGTGATACCTGGACTCAGGGCCTGCAGACCTCACCTATTATGGCGGTTACCTaGTTACCTTTTCTTTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: DIVMCHCDTWTQGLQTSPIMAVT*LPFLFN Trigger: ATTGAAAAGAAAAGGTAACCAGGTAACCGCCATAAT...AGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR TCA 90 bp | AACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAGAGTTGCACTTCCAAGAAGCTTaGTGTTTTCAAATTACAGTC | + |
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Preference number: 2 (lower is better) Translates to: NMRTDAQARDQVQGLRELHFQEA*CFQITV Trigger: GACTGTAATTTGAAAACATCAAGCTTCTTGGAAGTG...CAACTCTCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTGAAAGTTCAAAGACACCTTCAGTTGGGTAACTaGGTGTGGTCTGGTGTAAGT | + |
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Preference number: 2 (lower is better) Translates to: LWFRLQPSNRCKLKVQRHLQLGN*VWSGVS Trigger: ACTTACACCAGACCACACTCAGTTACCCAACTGAAG...GTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACTTGTTGAATGAGAGATaGTTTTCCTTCTATAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYLLNER*FSFYRH Trigger: ATGCCTATAGAAGGAAAAGCATCTCTCATTCAACAA...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACATTATGGCGGTTACCTaGTTACCTTTTCTTTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYIMAVT*LPFLFN Trigger: ATTGAAAAGAAAAGGTAACCAGGTAACCGCCATAAT...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGAACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAATTATGGCGGTTACCTaGTTACCTTTTCTTTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: GRNMRTDAQARDQVQGLRIMAVT*LPFLFN Trigger: ATTGAAAAGAAAAGGTAACCAGGTAACCGCCATAAT...TCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTTCCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTGAAAGTTCAAAGACACTCAGAAGCCTTCAGTTaGGTAACTGAGTGTGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LWFRLQPSNRCKLKVQRHSEAFS*VTECGL Trigger: CAGACCACACTCAGTTACCCAACTGAAGGCTTCTGA...GTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAATCCTTGCCATCACTCAGGGAATGCCTTCTCTCATAAAGTCAGAAATTGTCAGGCAACAGGAGTTTaGTGTTTTGTGTCCTCACTT | + |
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Preference number: 2 (lower is better) Translates to: LNPCHHSGNAFSHKVRNCQATGV*CFVSSL Trigger: AAGTGAGGACACAAAACATCAAACTCCTGTTGCCTG...ACAATTTCTGACTTTATGAGAGAAGGCATTCCCTGAGTGATGGCAAGGATTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAATCCTTGCCATCACTCAGGGAATGCCTTCTCTCATAAAGTCAGAAATTGTAACCATAGTGACATTTaGGATGATGGCCGGGATTCT | + |
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Preference number: 2 (lower is better) Translates to: LNPCHHSGNAFSHKVRNCNHSDI*DDGRDS Trigger: AGAATCCCGGCCATCATCTCAAATGTCACTATGGTT...ACAATTTCTGACTTTATGAGAGAAGGCATTCCCTGAGTGATGGCAAGGATTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAATCCTTGCCATCACTCAGGGAATGCCTTCTCTCATAAAGTCAGAAATTGTTTGCTGGAAGGAACATaGGAACTGATGCACAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: LNPCHHSGNAFSHKVRNCLLEGT*ELMHKQ Trigger: TTGCTTGTGCATCAGTTCTCATGTTCCTTCCAGCAA...ACAATTTCTGACTTTATGAGAGAAGGCATTCCCTGAGTGATGGCAAGGATTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTACTTGGGCAACTGGCTTGTTTGTGTTTAAGACATTTCCTCTTCTCACTTCCATCACTCACTGGTaGCTTAAAAGTATCCTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: SATWATGLFVFKTFPLLTSITHW*LKSILS Trigger: ACTTAGGATACTTTTAAGCCACCAGTGAGTGATGGA...AGTGAGAAGAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CCA 90 bp | AACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAGAGTTGATTATGGCGGTTACCTaGTTACCTTTTCTTTTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: NMRTDAQARDQVQGLRELIMAVT*LPFLFN Trigger: ATTGAAAAGAAAAGGTAACCAGGTAACCGCCATAAT...CAACTCTCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR TCA 90 bp | TCAGCTACTTGGGCAACTGGCTTGTTTGTGTTTAAGACATTTCCTCTTCTCACTCACTTCCAAGAAGCTTaGTGTTTTCAAATTACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SATWATGLFVFKTFPLLTHFQEA*CFQITV Trigger: GACTGTAATTTGAAAACATCAAGCTTCTTGGAAGTG...AGTGAGAAGAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGTTGAATGAGAGATGCTTTTCCTTCTATAGGCATTTTCCCTTGAGTGGATTAAACCATAGTGACATTTaGGATGATGGCCGGGATTCT | + |
|
Preference number: 2 (lower is better) Translates to: LLNERCFSFYRHFPLSGLNHSDI*DDGRDS Trigger: AGAATCCCGGCCATCATCTCAAATGTCACTATGGTT...TAATCCACTCAAGGGAAAATGCCTATAGAAGGAAAAGCATCTCTCATTCAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTGAAAGTTCAAAGACACTTCATAGCTTTCCCTTaGTATGATGACCTGTGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LWFRLQPSNRCKLKVQRHFIAFP*YDDLCQ Trigger: CTGACACAGGTCATCATAGCAAGGGAAAGCTATGAA...GTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTGAAAGTTCAAAGACACAGACTCAAGGTGATTTaGTGGAAGGAACATGAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LWFRLQPSNRCKLKVQRHRLKVI*WKEHEN Trigger: GTTCTCATGTTCCTTCCAGCAAATCACCTTGAGTCT...GTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR GCA 90 bp | TTAAATCCTTGCCATCACTCAGGGAATGCCTTCTCTCATAAAGTCAGAAATTGTAGACTCAAGGTGATTTaGTGGAAGGAACATGAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LNPCHHSGNAFSHKVRNCRLKVI*WKEHEN Trigger: GTTCTCATGTTCCTTCCAGCAAATCACCTTGAGTCT...ACAATTTCTGACTTTATGAGAGAAGGCATTCCCTGAGTGATGGCAAGGATTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTGAAAGTTCAAAGACACGTAAGTGGATCTTACTaGCTGGATCTGTCCATATCA | + |
|
Preference number: 2 (lower is better) Translates to: LWFRLQPSNRCKLKVQRHVSGSY*LDLSIS Trigger: TGATATGGACAGATCCAGCCAGTAAGATCCACTTAC...GTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR CAA 90 bp | CTAAGTGCATATAGTAACTCAGTGTCAGCTACTTGGGCAACTGGCTaGTTTGTGTTTAAGACATTTCCTCTTCTCACTAACTATATGGAT | + |
|
Preference number: 2 (lower is better) Translates to: LSAYSNSVSATWATG*FVFKTFPLLTNYMD Trigger: ATCCATATAGTTAGTGAGAAGAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGACACTGAGTTACTATATGCACTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTACTTGGGCAACTGGCTTGTTTGTGTTTAAGACATTTCCTCTTCTCACTGCCATAGAAAATGTCTaGTCTCCTAGATGTATTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SATWATGLFVFKTFPLLTAIENV*SPRCIF Trigger: AAAAATACATCTAGGAGACCAGACATTTTCTATGGC...AGTGAGAAGAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTACAATAACAGGGGCATTTCATCCACTAAGTGCATATAGTAACTCAGTGTCATCCATCACTCACTGGTaGCTTAAAAGTATCCTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: TTITGAFHPLSAYSNSVSSITHW*LKSILS Trigger: ACTTAGGATACTTTTAAGCCACCAGTGAGTGATGGA...TGACACTGAGTTACTATATGCACTTAGTGGATGAAATGCCCCTGTTATTGTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTACTTGGGCAACTGGCTTGTTTGTGTTTAAGACATTTCCTCTTCTCACTATTATGGCGGTTACCTaGTTACCTTTTCTTTTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: SATWATGLFVFKTFPLLTIMAVT*LPFLFN Trigger: ATTGAAAAGAAAAGGTAACCAGGTAACCGCCATAAT...AGTGAGAAGAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTGAAAGTTCAAAGACACTCCATATCAGATAGCTaGCAGCATTGCTTTTCTATG | + |
|
Preference number: 2 (lower is better) Translates to: LWFRLQPSNRCKLKVQRHSISDS*QHCFSM Trigger: CATAGAAAAGCAATGCTGCCAGCTATCTGATATGGA...GTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR CAA 90 bp | CCTCTTCTCACTAACTATATGGATTTAGTTAGGATTTTTGTAGTCTaGTTAGCATTTAGGCCAGAAGAGAACCCCCAGAATGAAACCATA | + |
|
Preference number: 2 (lower is better) Translates to: PLLTNYMDLVRIFVV*LAFRPEENPQNETI Trigger: TATGGTTTCATTCTGGGGGTTCTCTTCTGGCCTAAATGCTAACAAGACTACAAAAATCCTAACTAAATCCATATAGTTAGTGAGAAGAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTGAAAGTTCAAAGACACCACTTCCAAGAAGCTTaGTGTTTTCAAATTACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LWFRLQPSNRCKLKVQRHHFQEA*CFQITV Trigger: GACTGTAATTTGAAAACATCAAGCTTCTTGGAAGTG...GTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR TCA 90 bp | ACTACAATAACAGGGGCATTTCATCCACTAAGTGCATATAGTAACTCAGTGTCACACTTCCAAGAAGCTTaGTGTTTTCAAATTACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TTITGAFHPLSAYSNSVSHFQEA*CFQITV Trigger: GACTGTAATTTGAAAACATCAAGCTTCTTGGAAGTG...TGACACTGAGTTACTATATGCACTTAGTGGATGAAATGCCCCTGTTATTGTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTTGAATGAGAGATGCTTTTCCTTCTATAGGCATTTTCCCTTGAGTGGATTACACTTCCAAGAAGCTTaGTGTTTTCAAATTACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LLNERCFSFYRHFPLSGLHFQEA*CFQITV Trigger: GACTGTAATTTGAAAACATCAAGCTTCTTGGAAGTG...TAATCCACTCAAGGGAAAATGCCTATAGAAGGAAAAGCATCTCTCATTCAACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CCA 90 bp | ACTACAATAACAGGGGCATTTCATCCACTAAGTGCATATAGTAACTCAGTGTCAGCCATAGAAAATGTCTaGTCTCCTAGATGTATTTTT | + |
|
Preference number: 2 (lower is better) Translates to: TTITGAFHPLSAYSNSVSAIENV*SPRCIF Trigger: AAAAATACATCTAGGAGACCAGACATTTTCTATGGC...TGACACTGAGTTACTATATGCACTTAGTGGATGAAATGCCCCTGTTATTGTAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTGAAAGTTCAAAGACACGCCATAGAAAATGTCTaGTCTCCTAGATGTATTTTT | + |
|
Preference number: 2 (lower is better) Translates to: LWFRLQPSNRCKLKVQRHAIENV*SPRCIF Trigger: AAAAATACATCTAGGAGACCAGACATTTTCTATGGC...GTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CCA 90 bp | ACTACAATAACAGGGGCATTTCATCCACTAAGTGCATATAGTAACTCAGTGTCAATTATGGCGGTTACCTaGTTACCTTTTCTTTTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: TTITGAFHPLSAYSNSVSIMAVT*LPFLFN Trigger: ATTGAAAAGAAAAGGTAACCAGGTAACCGCCATAAT...TGACACTGAGTTACTATATGCACTTAGTGGATGAAATGCCCCTGTTATTGTAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CAA 90 bp | GGAAGGAACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGACATTCTCTTTACCTCTaGTTTGGCAGCACTCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GRNMRTDAQARDQVQGLRHSLYL*FGSTPA Trigger: GGCTGGAGTGCTGCCAAACAAGAGGTAAAGAGAATG...TCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTTCCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CAA 90 bp | GACATTGTTATGTGTCATTGTGATACCTGGACTCAGGGCCTGCAGACCTCACCTGGGCAACTGGCTTGTTaGTGTTTAAGACATTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: DIVMCHCDTWTQGLQTSPGQLAC*CLRHFL Trigger: GAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCC...AGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CAA 90 bp | GACATTGTTATGTGTCATTGTGATACCTGGACTCAGGGCCTGCAGACCTCACCTTCAGGCAACAGGAGTTaGATGTTTTGTGTCCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: DIVMCHCDTWTQGLQTSPSGNRS*MFCVLT Trigger: AGTGAGGACACAAAACATCAAACTCCTGTTGCCTGA...AGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CAA 90 bp | AACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAGAGTTGCATTCTCTTTACCTCTaGTTTGGCAGCACTCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: NMRTDAQARDQVQGLRELHSLYL*FGSTPA Trigger: GGCTGGAGTGCTGCCAAACAAGAGGTAAAGAGAATG...CAACTCTCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CAA 90 bp | GACATTGTTATGTGTCATTGTGATACCTGGACTCAGGGCCTGCAGACCTCACCTCAAGGGCTGAGAGAGTaGTTGAATGAGAGATGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: DIVMCHCDTWTQGLQTSPQGLRE*LNERCF Trigger: AAAGCATCTCTCATTCAACAACTCTCTCAGCCCTTG...AGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CAA 90 bp | GGAAGGAACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAGGGCAACTGGCTTGTTaGTGTTTAAGACATTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GRNMRTDAQARDQVQGLRGQLAC*CLRHFL Trigger: GAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCC...TCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTTCCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CAA 90 bp | GGAAGGAACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGATCAGGCAACAGGAGTTaGATGTTTTGTGTCCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: GRNMRTDAQARDQVQGLRSGNRS*MFCVLT Trigger: AGTGAGGACACAAAACATCAAACTCCTGTTGCCTGA...TCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTTCCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACCAAGGGCTGAGAGAGTaGTTGAATGAGAGATGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYQGLRE*LNERCF Trigger: AAAGCATCTCTCATTCAACAACTCTCTCAGCCCTTG...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR-3UTR CAA 90 bp | GACATTGTTATGTGTCATTGTGATACCTGGACTCAGGGCCTGCAGACCTCACCTTATGTGTACTCCCATTaGAATAGTTGGAGCCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: DIVMCHCDTWTQGLQTSPYVYSH*NSWSLR Trigger: TCTCAGGCTCCAACTATTCAAATGGGAGTACACATA...AGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACGCACTACCACCAATATaGGAGGATTGTTTCCATTGC | + |
|
Preference number: 3 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYALPPI*EDCFHC Trigger: GCAATGGAAACAATCCTCCAATATTGGTGGTAGTGC...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR TCA 72 bp | AGACTCAAGGTGATTTGCTGGAAGGAACATGAGAACTaGTGCACAAGCAAGGGATCAAGTTCAAGGGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RLKVICWKEHEN*CTSKGSSSRAE Trigger: CTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTTCCTTCCAGCAAATCACCTTGAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR TCA 72 bp | GAGCCTGAGACTCAAGGTGATTTGCTGGAAGGAACATaGGAACTGATGCACAAGCAAGGGATCAAGTTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: EPETQGDLLEGT*ELMHKQGIKFK Trigger: CTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTTCCTTCCAGCAAATCACCTTGAGTCTCAGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | AACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAGAGTTGGGGCAACTGGCTTGTTaGTGTTTAAGACATTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: NMRTDAQARDQVQGLRELGQLAC*CLRHFL Trigger: GAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCC...CAACTCTCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | GACATTGTTATGTGTCATTGTGATACCTGGACTCAGGGCCTGCAGACCTCACCTACTTGGGCAACTGGCTaGTTTGTGTTTAAGACATTT | + |
|
Preference number: 3 (lower is better) Translates to: DIVMCHCDTWTQGLQTSPTWATG*FVFKTF Trigger: AAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGT...AGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | AACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAGAGTTGTCAGGCAACAGGAGTTaGATGTTTTGTGTCCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: NMRTDAQARDQVQGLRELSGNRS*MFCVLT Trigger: AGTGAGGACACAAAACATCAAACTCCTGTTGCCTGA...CAACTCTCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACCATTGCTGGTTATCCTaGCCAGCATTAGCTATCATT | + |
|
Preference number: 3 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYHCWLS*PALAII Trigger: AATGATAGCTAATGCTGGCAAGGATAACCAGCAATG...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| 3UTR TCA 72 bp | TACACTGATTCCAAATATTCTGAGAAGCAGCCGTATTaGCTTCCAGGTGCCTGTACAAGACTGCACTACCAC | + |
|
Preference number: 3 (lower is better) Translates to: YTDSKYSEKQPY*LPGACTRLHYH Trigger: GTGGTAGTGCAGTCTTGTACAGGCACCTGGAAGTCAATACGGCTGCTTCTCAGAATATTTGGAATCAGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR CCA 72 bp | GTCAGTTATGACATTGTTATGTGTCATTGTGATACCTaGACTCAGGGCCTGCAGACCTCACCTCATCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: VSYDIVMCHCDT*TQGLQTSPHPF Trigger: AAAAGGATGAGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTCATAACTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | GACATTGTTATGTGTCATTGTGATACCTGGACTCAGGGCCTGCAGACCTCACCTATGTGGTACACAAATTaGCATTCAAGAAAAACACCC | + |
|
Preference number: 3 (lower is better) Translates to: DIVMCHCDTWTQGLQTSPMWYTN*HSRKTP Trigger: GGGTGTTTTTCTTGAATGCAAATTTGTGTACCACAT...AGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACACTTGGGCAACTGGCTaGTTTGTGTTTAAGACATTT | + |
|
Preference number: 3 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYTWATG*FVFKTF Trigger: AAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGT...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACATGTGGTACACAAATTaGCATTCAAGAAAAACACCC | + |
|
Preference number: 3 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYMWYTN*HSRKTP Trigger: GGGTGTTTTTCTTGAATGCAAATTTGTGTACCACAT...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGGAACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAAGGATTTTTGTAGTCTaGTTAGCATTTAGGCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GRNMRTDAQARDQVQGLRRIFVV*LAFRPE Trigger: TTCTGGCCTAAATGCTAACAAGACTACAAAAATCCT...TCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTTCCTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR TCA 72 bp | ATGGGAGGAAATGTAGATGCTAACCATAGTGACATTTaGGATGATGGCCGGGATTCTCCACATTTCATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: MGGNVDANHSDI*DDGRDSPHFIA Trigger: AGCTATGAAATGTGGAGAATCCCGGCCATCATCTCAAATGTCACTATGGTTAGCATCTACATTTCCTCCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR TCA 72 bp | ACAAGGGTCCAAACTATAGGTTTAAGTGTGGAAAGATaGTCAGAAGCCTTCAGTTGGGTAACTGAGTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TRVQTIGLSVER*SEAFSWVTECG Trigger: ACCACACTCAGTTACCCAACTGAAGGCTTCTGATCATCTTTCCACACTTAAACCTATAGTTTGGACCCTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR CCA 72 bp | GGATCTTACTGGCTGGATCTGTCCATATCAGATAGCTaGCAGCATTGCTTTTCTATGAATCGTGTGATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GSYWLDLSISDS*QHCFSMNRVIF Trigger: GAAAATCACACGATTCATAGAAAAGCAATGCTGCCAGCTATCTGATATGGACAGATCCAGCCAGTAAGATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | AACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAGAGTTGAGGATTTTTGTAGTCTaGTTAGCATTTAGGCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: NMRTDAQARDQVQGLRELRIFVV*LAFRPE Trigger: TTCTGGCCTAAATGCTAACAAGACTACAAAAATCCT...CAACTCTCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR TCA 72 bp | ATGAGAGATGCTTTTCCTTCTATAGGCATTTTCCCTTaGGTGGATTACCCAGGTAGTTTACATCCACCACTT | + |
|
Preference number: 3 (lower is better) Translates to: MRDAFPSIGIFP*VDYPGSLHPPL Trigger: AAGTGGTGGATGTAAACTACCTGGGTAATCCACTCAAGGGAAAATGCCTATAGAAGGAAAAGCATCTCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR GCA 72 bp | ACTGCACTACCACCAATATTGGAGGATTGTTTCCATTaGTGGTTATCCTTGCCAGCATTAGCTATCATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: TALPPILEDCFH*WLSLPALAIIC Trigger: ACAAATGATAGCTAATGCTGGCAAGGATAACCAGCAATGGAAACAATCCTCCAATATTGGTGGTAGTGCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR CCA 72 bp | CCACTAAGTGCATATAGTAACTCAGTGTCAGCTACTTaGGCAACTGGCTTGTTTGTGTTTAAGACATTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PLSAYSNSVSAT*ATGLFVFKTFP Trigger: AGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGACACTGAGTTACTATATGCACTTAGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAAATCCTTGCCATCACTCAGGGAATGCCTTCTCTCATAAAGTCAGAAATTGTGGGCAACTGGCTTGTTaGTGTTTAAGACATTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LNPCHHSGNAFSHKVRNCGQLAC*CLRHFL Trigger: GAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCC...ACAATTTCTGACTTTATGAGAGAAGGCATTCCCTGAGTGATGGCAAGGATTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTGAAAGTTCAAAGACACTCAGGCAACAGGAGTTaGATGTTTTGTGTCCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: LWFRLQPSNRCKLKVQRHSGNRS*MFCVLT Trigger: AGTGAGGACACAAAACATCAAACTCCTGTTGCCTGA...GTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAAATCCTTGCCATCACTCAGGGAATGCCTTCTCTCATAAAGTCAGAAATTGTTCAGGCAACAGGAGTTaGATGTTTTGTGTCCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: LNPCHHSGNAFSHKVRNCSGNRS*MFCVLT Trigger: AGTGAGGACACAAAACATCAAACTCCTGTTGCCTGA...ACAATTTCTGACTTTATGAGAGAAGGCATTCCCTGAGTGATGGCAAGGATTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTGAAAGTTCAAAGACACCAAGGGCTGAGAGAGTaGTTGAATGAGAGATGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LWFRLQPSNRCKLKVQRHQGLRE*LNERCF Trigger: AAAGCATCTCTCATTCAACAACTCTCTCAGCCCTTG...GTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAAATCCTTGCCATCACTCAGGGAATGCCTTCTCTCATAAAGTCAGAAATTGTCAAGGGCTGAGAGAGTaGTTGAATGAGAGATGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LNPCHHSGNAFSHKVRNCQGLRE*LNERCF Trigger: AAAGCATCTCTCATTCAACAACTCTCTCAGCCCTTG...ACAATTTCTGACTTTATGAGAGAAGGCATTCCCTGAGTGATGGCAAGGATTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCTACTTGGGCAACTGGCTTGTTTGTGTTTAAGACATTTCCTCTTCTCACTATGTGGTACACAAATTaGCATTCAAGAAAAACACCC | + |
|
Preference number: 3 (lower is better) Translates to: SATWATGLFVFKTFPLLTMWYTN*HSRKTP Trigger: GGGTGTTTTTCTTGAATGCAAATTTGTGTACCACAT...AGTGAGAAGAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCTACTTGGGCAACTGGCTTGTTTGTGTTTAAGACATTTCCTCTTCTCACTAGGATTTTTGTAGTCTaGTTAGCATTTAGGCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SATWATGLFVFKTFPLLTRIFVV*LAFRPE Trigger: TTCTGGCCTAAATGCTAACAAGACTACAAAAATCCT...AGTGAGAAGAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTGAATGAGAGATGCTTTTCCTTCTATAGGCATTTTCCCTTGAGTGGATTATCAGGCAACAGGAGTTaGATGTTTTGTGTCCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: LLNERCFSFYRHFPLSGLSGNRS*MFCVLT Trigger: AGTGAGGACACAAAACATCAAACTCCTGTTGCCTGA...TAATCCACTCAAGGGAAAATGCCTATAGAAGGAAAAGCATCTCTCATTCAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTACAATAACAGGGGCATTTCATCCACTAAGTGCATATAGTAACTCAGTGTCAACTTGGGCAACTGGCTaGTTTGTGTTTAAGACATTT | + |
|
Preference number: 3 (lower is better) Translates to: TTITGAFHPLSAYSNSVSTWATG*FVFKTF Trigger: AAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGT...TGACACTGAGTTACTATATGCACTTAGTGGATGAAATGCCCCTGTTATTGTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAAATCCTTGCCATCACTCAGGGAATGCCTTCTCTCATAAAGTCAGAAATTGTACTTGGGCAACTGGCTaGTTTGTGTTTAAGACATTT | + |
|
Preference number: 3 (lower is better) Translates to: LNPCHHSGNAFSHKVRNCTWATG*FVFKTF Trigger: AAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGT...ACAATTTCTGACTTTATGAGAGAAGGCATTCCCTGAGTGATGGCAAGGATTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTGAAAGTTCAAAGACACACTTGGGCAACTGGCTaGTTTGTGTTTAAGACATTT | + |
|
Preference number: 3 (lower is better) Translates to: LWFRLQPSNRCKLKVQRHTWATG*FVFKTF Trigger: AAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGT...GTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR GCA 72 bp | ATGAATCGTGTGATTTTCACATGTGATTTAAATCCTTaGCATCACTCAGGGAATGCCTTCTCTCATAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: MNRVIFTCDLNP*HHSGNAFSHKV Trigger: GACTTTATGAGAGAAGGCATTCCCTGAGTGATGGCAAGGATTTAAATCACATGTGAAAATCACACGATTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTGAAAGTTCAAAGACACATGTGGTACACAAATTaGCATTCAAGAAAAACACCC | + |
|
Preference number: 3 (lower is better) Translates to: LWFRLQPSNRCKLKVQRHMWYTN*HSRKTP Trigger: GGGTGTTTTTCTTGAATGCAAATTTGTGTACCACAT...GTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAAATCCTTGCCATCACTCAGGGAATGCCTTCTCTCATAAAGTCAGAAATTGTATGTGGTACACAAATTaGCATTCAAGAAAAACACCC | + |
|
Preference number: 3 (lower is better) Translates to: LNPCHHSGNAFSHKVRNCMWYTN*HSRKTP Trigger: GGGTGTTTTTCTTGAATGCAAATTTGTGTACCACAT...ACAATTTCTGACTTTATGAGAGAAGGCATTCCCTGAGTGATGGCAAGGATTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTACAATAACAGGGGCATTTCATCCACTAAGTGCATATAGTAACTCAGTGTCAAGGATTTTTGTAGTCTaGTTAGCATTTAGGCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TTITGAFHPLSAYSNSVSRIFVV*LAFRPE Trigger: TTCTGGCCTAAATGCTAACAAGACTACAAAAATCCT...TGACACTGAGTTACTATATGCACTTAGTGGATGAAATGCCCCTGTTATTGTAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTGAAAGTTCAAAGACACAGGATTTTTGTAGTCTaGTTAGCATTTAGGCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LWFRLQPSNRCKLKVQRHRIFVV*LAFRPE Trigger: TTCTGGCCTAAATGCTAACAAGACTACAAAAATCCT...GTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTGAATGAGAGATGCTTTTCCTTCTATAGGCATTTTCCCTTGAGTGGATTAAGGATTTTTGTAGTCTaGTTAGCATTTAGGCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LLNERCFSFYRHFPLSGLRIFVV*LAFRPE Trigger: TTCTGGCCTAAATGCTAACAAGACTACAAAAATCCT...TAATCCACTCAAGGGAAAATGCCTATAGAAGGAAAAGCATCTCTCATTCAACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR TCA 72 bp | TGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTaGAAGTTCAAAGACACTTTAATTTGCATTTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CGLDYSLLTGVS*KFKDTLICIFL Trigger: CAGGAAAATGCAAATTAAAGTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR TCA 72 bp | CTTGGTCATTTTAGTAATAACATGAGGATAAAGCAATaGCACCTAGTGAGAATTCAAAGTGTCATTGCTATG | + |
|
Preference number: 3 (lower is better) Translates to: LGHFSNNMRIKQ*HLVRIQSVIAM Trigger: CATAGCAATGACACTTTGAATTCTCACTAGGTGTCATTGCTTTATCCTCATGTTATTACTAAAATGACCAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGGAACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGACTGACTGAGCAGCAATaGCCAATGTACTTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRNMRTDAQARDQVQGLRLTEQQ*PMYLVA Trigger: AGCCACCAAGTACATTGGTCATTGCTGCTCAGTCAG...TCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTTCCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | GACATTGTTATGTGTCATTGTGATACCTGGACTCAGGGCCTGCAGACCTCACCTCAGAAGCCAACTGACTaGGCAGCAATGACCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: DIVMCHCDTWTQGLQTSPQKPTD*AAMTNV Trigger: TACATTGGTCATTGCTGCTCAGTCAGTTGGCTTCTG...AGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | AACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAGAGTTGCTGACTGAGCAGCAATaGCCAATGTACTTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NMRTDAQARDQVQGLRELLTEQQ*PMYLVA Trigger: AGCCACCAAGTACATTGGTCATTGCTGCTCAGTCAG...CAACTCTCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACCAGAAGCCAACTGACTaGGCAGCAATGACCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYQKPTD*AAMTNV Trigger: TACATTGGTCATTGCTGCTCAGTCAGTTGGCTTCTG...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | AACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAGAGTTGCAGAAGCCAACTGACTaGGCAGCAATGACCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: NMRTDAQARDQVQGLRELQKPTD*AAMTNV Trigger: TACATTGGTCATTGCTGCTCAGTCAGTTGGCTTCTG...CAACTCTCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | GACATTGTTATGTGTCATTGTGATACCTGGACTCAGGGCCTGCAGACCTCACCTTCTTTTAGAGCATGCTaGGCACTGTGGATATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DIVMCHCDTWTQGLQTSPSFRAC*ALWICL Trigger: CAAACATATCCACAGTGCTCAGCATGCTCTAAAAGA...AGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGGAACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAAGTAGGTTGTCAAGATaGCCACTATGGAGGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: GRNMRTDAQARDQVQGLRSRLSR*PLWRRM Trigger: CATTCTCCTCCATAGTGGTCATCTTGACAACCTACT...TCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTTCCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR CAA 72 bp | TCCAGGTGCCTGTACAAGACTGCACTACCACCAATATaGGAGGATTGTTTCCATTGCTGGTTATCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRCLYKTALPPI*EDCFHCWLSLP Trigger: TGGCAAGGATAACCAGCAATGGAAACAATCCTCCAATATTGGTGGTAGTGCAGTCTTGTACAGGCACCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACTCTTTTAGAGCATGCTaGGCACTGTGGATATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYSFRAC*ALWICL Trigger: CAAACATATCCACAGTGCTCAGCATGCTCTAAAAGA...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | AACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAGAGTTGAGTAGGTTGTCAAGATaGCCACTATGGAGGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: NMRTDAQARDQVQGLRELSRLSR*PLWRRM Trigger: CATTCTCCTCCATAGTGGTCATCTTGACAACCTACT...CAACTCTCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | GACATTGTTATGTGTCATTGTGATACCTGGACTCAGGGCCTGCAGACCTCACCTCACTGTGGATATGTTTaGCTTGTCTTTTATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DIVMCHCDTWTQGLQTSPHCGYV*LVFYVC Trigger: ACAGACATAAAAGACAAGTCAAACATATCCACAGTG...AGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | AACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAGAGTTGTCTTTTAGAGCATGCTaGGCACTGTGGATATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NMRTDAQARDQVQGLRELSFRAC*ALWICL Trigger: CAAACATATCCACAGTGCTCAGCATGCTCTAAAAGA...CAACTCTCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR GCA 90 bp | TTGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTGAAAGTTCAAAGACACGTGCAGTTGCCACATTaGCTGAAGCAACCCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LWFRLQPSNRCKLKVQRHVQLPH*LKQPMS Trigger: GCTCATGGGTTGCTTCAGGCAATGTGGCAACTGCAC...GTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACTTGCTTGGAAACAACTaGGTAGACACATTGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYLLGNN*VDTLHK Trigger: TTTATGCAATGTGTCTACTCAGTTGTTTCCAAGCAA...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | TTGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTGAAAGTTCAAAGACACCTGACTGAGCAGCAATaGCCAATGTACTTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWFRLQPSNRCKLKVQRHLTEQQ*PMYLVA Trigger: AGCCACCAAGTACATTGGTCATTGCTGCTCAGTCAG...GTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGGAACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGACACTGTGGATATGTTTaGCTTGTCTTTTATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRNMRTDAQARDQVQGLRHCGYV*LVFYVC Trigger: ACAGACATAAAAGACAAGTCAAACATATCCACAGTG...TCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTTCCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCTACTTGGGCAACTGGCTTGTTTGTGTTTAAGACATTTCCTCTTCTCACTAGTAGGTTGTCAAGATaGCCACTATGGAGGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SATWATGLFVFKTFPLLTSRLSR*PLWRRM Trigger: CATTCTCCTCCATAGTGGTCATCTTGACAACCTACT...AGTGAGAAGAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTGAATGAGAGATGCTTTTCCTTCTATAGGCATTTTCCCTTGAGTGGATTAGTGCAGTTGCCACATTaGCTGAAGCAACCCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLNERCFSFYRHFPLSGLVQLPH*LKQPMS Trigger: GCTCATGGGTTGCTTCAGGCAATGTGGCAACTGCAC...TAATCCACTCAAGGGAAAATGCCTATAGAAGGAAAAGCATCTCTCATTCAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACTTGATAGTGATTGCTTaGAAACAACTGAGTAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYLIVIA*KQLSRH Trigger: GTGTCTACTCAGTTGTTTCCAAGCAATCACTATCAA...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR CAA 72 bp | ATGATGACCTGTGTCAGGCAACAGGAGTTTGATGTTTaGTGTCCTCACTTCCACTGTGTCTTAGTTACTACA | + |
|
Preference number: 4 (lower is better) Translates to: MMTCVRQQEFDV*CPHFHCVLVTT Trigger: TGTAGTAACTAAGACACAGTGGAAGTGAGGACACAAAACATCAAACTCCTGTTGCCTGACACAGGTCATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR CAA 72 bp | GACTGCACTACCACCAATATTGGAGGATTGTTTCCATaGCTGGTTATCCTTGCCAGCATTAGCTATCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: DCTTTNIGGLFP*LVILASISYHL Trigger: CAAATGATAGCTAATGCTGGCAAGGATAACCAGCAATGGAAACAATCCTCCAATATTGGTGGTAGTGCAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTGAATGAGAGATGCTTTTCCTTCTATAGGCATTTTCCCTTGAGTGGATTACTGACTGAGCAGCAATaGCCAATGTACTTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLNERCFSFYRHFPLSGLLTEQQ*PMYLVA Trigger: AGCCACCAAGTACATTGGTCATTGCTGCTCAGTCAG...TAATCCACTCAAGGGAAAATGCCTATAGAAGGAAAAGCATCTCTCATTCAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | ACTACAATAACAGGGGCATTTCATCCACTAAGTGCATATAGTAACTCAGTGTCACAGAAGCCAACTGACTaGGCAGCAATGACCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: TTITGAFHPLSAYSNSVSQKPTD*AAMTNV Trigger: TACATTGGTCATTGCTGCTCAGTCAGTTGGCTTCTG...TGACACTGAGTTACTATATGCACTTAGTGGATGAAATGCCCCTGTTATTGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | AACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAGAGTTGCACTGTGGATATGTTTaGCTTGTCTTTTATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NMRTDAQARDQVQGLRELHCGYV*LVFYVC Trigger: ACAGACATAAAAGACAAGTCAAACATATCCACAGTG...CAACTCTCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCTACTTGGGCAACTGGCTTGTTTGTGTTTAAGACATTTCCTCTTCTCACTTCTTTTAGAGCATGCTaGGCACTGTGGATATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SATWATGLFVFKTFPLLTSFRAC*ALWICL Trigger: CAAACATATCCACAGTGCTCAGCATGCTCTAAAAGA...AGTGAGAAGAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR CCA 90 bp | AACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAGAGTTGATTCCCAATGTAATCTaGGAGAAGAGAAAAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NMRTDAQARDQVQGLRELIPNVI*EKRKIP Trigger: GGGAATTTTTCTCTTCTCCCAGATTACATTGGGAAT...CAACTCTCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000228463.2 |
||
| CDS-3UTR TCA 90 bp | TTGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTGAAAGTTCAAAGACACAGTAGGTTGTCAAGATaGCCACTATGGAGGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: LWFRLQPSNRCKLKVQRHSRLSR*PLWRRM Trigger: CATTCTCCTCCATAGTGGTCATCTTGACAACCTACT...GTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCTACTTGGGCAACTGGCTTGTTTGTGTTTAAGACATTTCCTCTTCTCACTGAGAAAAATTCCCATTaGAAAATGCCTGGTAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SATWATGLFVFKTFPLLTEKNSH*KMPGSH Trigger: ATGGCTACCAGGCATTTTGCAATGGGAATTTTTCTC...AGTGAGAAGAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000228463.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCTACTTGGGCAACTGGCTTGTTTGTGTTTAAGACATTTCCTCTTCTCACTTTGCTTGGAAACAACTaGGTAGACACATTGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SATWATGLFVFKTFPLLTLLGNN*VDTLHK Trigger: TTTATGCAATGTGTCTACTCAGTTGTTTCCAAGCAA...AGTGAGAAGAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCTACTTGGGCAACTGGCTTGTTTGTGTTTAAGACATTTCCTCTTCTCACTCACTGTGGATATGTTTaGCTTGTCTTTTATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SATWATGLFVFKTFPLLTHCGYV*LVFYVC Trigger: ACAGACATAAAAGACAAGTCAAACATATCCACAGTG...AGTGAGAAGAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | TTAAATCCTTGCCATCACTCAGGGAATGCCTTCTCTCATAAAGTCAGAAATTGTTCTTTTAGAGCATGCTaGGCACTGTGGATATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNPCHHSGNAFSHKVRNCSFRAC*ALWICL Trigger: CAAACATATCCACAGTGCTCAGCATGCTCTAAAAGA...ACAATTTCTGACTTTATGAGAGAAGGCATTCCCTGAGTGATGGCAAGGATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTGAATGAGAGATGCTTTTCCTTCTATAGGCATTTTCCCTTGAGTGGATTAAGTAGGTTGTCAAGATaGCCACTATGGAGGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: LLNERCFSFYRHFPLSGLSRLSR*PLWRRM Trigger: CATTCTCCTCCATAGTGGTCATCTTGACAACCTACT...TAATCCACTCAAGGGAAAATGCCTATAGAAGGAAAAGCATCTCTCATTCAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCTACTTGGGCAACTGGCTTGTTTGTGTTTAAGACATTTCCTCTTCTCACTTTGATAGTGATTGCTTaGAAACAACTGAGTAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SATWATGLFVFKTFPLLTLIVIA*KQLSRH Trigger: GTGTCTACTCAGTTGTTTCCAAGCAATCACTATCAA...AGTGAGAAGAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR CAA 72 bp | GTAACTCAGTGTCAGCTACTTGGGCAACTGGCTTGTTaGTGTTTAAGACATTTCCTCTTCTCACTAACTATA | + |
|
Preference number: 4 (lower is better) Translates to: VTQCQLLGQLAC*CLRHFLFSLTI Trigger: TATAGTTAGTGAGAAGAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGACACTGAGTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| 3UTR CAA 72 bp | TATAGTAACTCAGTGTCAGCTACTTGGGCAACTGGCTaGTTTGTGTTTAAGACATTTCCTCTTCTCACTAAC | + |
|
Preference number: 4 (lower is better) Translates to: YSNSVSATWATG*FVFKTFPLLTN Trigger: GTTAGTGAGAAGAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGACACTGAGTTACTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR GCA 90 bp | ACTACAATAACAGGGGCATTTCATCCACTAAGTGCATATAGTAACTCAGTGTCAGAGAAAAATTCCCATTaGAAAATGCCTGGTAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TTITGAFHPLSAYSNSVSEKNSH*KMPGSH Trigger: ATGGCTACCAGGCATTTTGCAATGGGAATTTTTCTC...TGACACTGAGTTACTATATGCACTTAGTGGATGAAATGCCCCTGTTATTGTAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000228463.2 |
||
| 3UTR CAA 72 bp | CCAATATTGGAGGATTGTTTCCATTGCTGGTTATCCTaGCCAGCATTAGCTATCATTTGTGGTTTAGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: PILEDCFHCWLS*PALAIICGLDY Trigger: GTAATCTAAACCACAAATGATAGCTAATGCTGGCAAGGATAACCAGCAATGGAAACAATCCTCCAATATTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | ACTACAATAACAGGGGCATTTCATCCACTAAGTGCATATAGTAACTCAGTGTCATTGCTTGGAAACAACTaGGTAGACACATTGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: TTITGAFHPLSAYSNSVSLLGNN*VDTLHK Trigger: TTTATGCAATGTGTCTACTCAGTTGTTTCCAAGCAA...TGACACTGAGTTACTATATGCACTTAGTGGATGAAATGCCCCTGTTATTGTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | TTAAATCCTTGCCATCACTCAGGGAATGCCTTCTCTCATAAAGTCAGAAATTGTTTGCTTGGAAACAACTaGGTAGACACATTGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LNPCHHSGNAFSHKVRNCLLGNN*VDTLHK Trigger: TTTATGCAATGTGTCTACTCAGTTGTTTCCAAGCAA...ACAATTTCTGACTTTATGAGAGAAGGCATTCCCTGAGTGATGGCAAGGATTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | ACTACAATAACAGGGGCATTTCATCCACTAAGTGCATATAGTAACTCAGTGTCACACTGTGGATATGTTTaGCTTGTCTTTTATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TTITGAFHPLSAYSNSVSHCGYV*LVFYVC Trigger: ACAGACATAAAAGACAAGTCAAACATATCCACAGTG...TGACACTGAGTTACTATATGCACTTAGTGGATGAAATGCCCCTGTTATTGTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR TCA 90 bp | TTGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTGAAAGTTCAAAGACACCACTGTGGATATGTTTaGCTTGTCTTTTATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LWFRLQPSNRCKLKVQRHHCGYV*LVFYVC Trigger: ACAGACATAAAAGACAAGTCAAACATATCCACAGTG...GTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTGAATGAGAGATGCTTTTCCTTCTATAGGCATTTTCCCTTGAGTGGATTAGAGAAAAATTCCCATTaGAAAATGCCTGGTAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLNERCFSFYRHFPLSGLEKNSH*KMPGSH Trigger: ATGGCTACCAGGCATTTTGCAATGGGAATTTTTCTC...TAATCCACTCAAGGGAAAATGCCTATAGAAGGAAAAGCATCTCTCATTCAACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000228463.2 |
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| CDS-3UTR CCA 90 bp | ACTACAATAACAGGGGCATTTCATCCACTAAGTGCATATAGTAACTCAGTGTCATTGATAGTGATTGCTTaGAAACAACTGAGTAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: TTITGAFHPLSAYSNSVSLIVIA*KQLSRH Trigger: GTGTCTACTCAGTTGTTTCCAAGCAATCACTATCAA...TGACACTGAGTTACTATATGCACTTAGTGGATGAAATGCCCCTGTTATTGTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR TCA 90 bp | TTGTTGAATGAGAGATGCTTTTCCTTCTATAGGCATTTTCCCTTGAGTGGATTATTGCTTGGAAACAACTaGGTAGACACATTGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLNERCFSFYRHFPLSGLLLGNN*VDTLHK Trigger: TTTATGCAATGTGTCTACTCAGTTGTTTCCAAGCAA...TAATCCACTCAAGGGAAAATGCCTATAGAAGGAAAAGCATCTCTCATTCAACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CCA 90 bp | TTGTTGAATGAGAGATGCTTTTCCTTCTATAGGCATTTTCCCTTGAGTGGATTAATTCCCAATGTAATCTaGGAGAAGAGAAAAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLNERCFSFYRHFPLSGLIPNVI*EKRKIP Trigger: GGGAATTTTTCTCTTCTCCCAGATTACATTGGGAAT...TAATCCACTCAAGGGAAAATGCCTATAGAAGGAAAAGCATCTCTCATTCAACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000228463.2 |
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| 3UTR CAA 72 bp | ACTAACTATATGGATTTAGTTAGGATTTTTGTAGTCTaGTTAGCATTTAGGCCAGAAGAGAACCCCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TNYMDLVRIFVV*LAFRPEENPQN Trigger: ATTCTGGGGGTTCTCTTCTGGCCTAAATGCTAACAAGACTACAAAAATCCTAACTAAATCCATATAGTTAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | GACATTGTTATGTGTCATTGTGATACCTGGACTCAGGGCCTGCAGACCTCACCTTGGGGCCTGACACTCTaGCTGGAGTCAAGATGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: DIVMCHCDTWTQGLQTSPWGLTL*LESRCL Trigger: TAAACATCTTGACTCCAGCAAGAGTGTCAGGCCCCA...AGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGGAACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGATGGGGCCTGACACTCTaGCTGGAGTCAAGATGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GRNMRTDAQARDQVQGLRWGLTL*LESRCL Trigger: TAAACATCTTGACTCCAGCAAGAGTGTCAGGCCCCA...TCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTTCCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACTGGGGCCTGACACTCTaGCTGGAGTCAAGATGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYWGLTL*LESRCL Trigger: TAAACATCTTGACTCCAGCAAGAGTGTCAGGCCCCA...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACCAGGATGAGGATAGTTaGTGTGGCTCTGTCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYQDEDS*CGSVFR Trigger: CCTGAAGACAGAGCCACACAAACTATCCTCATCCTG...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS TCA 90 bp | GACTTGTCTTTTATGTCTGTAGAGGACACTCACCATAGAGACACTTaGGCAGGCCATGAGAGTCAGACACAGAGCATCAGAGAAGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: DLSFMSVEDTHHRDT*AGHESQTQSIREAQ Trigger: CTGTGCTTCTCTGATGCTCTGTGTCTGACTCTCATGGCCTGCTCAAGTGTCTCTATGGTGAGTGTCCTCTACAGACATAAAAGACAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000057229.2 ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | AACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAGAGTTGTGGGGCCTGACACTCTaGCTGGAGTCAAGATGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: NMRTDAQARDQVQGLRELWGLTL*LESRCL Trigger: TAAACATCTTGACTCCAGCAAGAGTGTCAGGCCCCA...CAACTCTCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | AACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAGAGTTGCAGGATGAGGATAGTTaGTGTGGCTCTGTCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NMRTDAQARDQVQGLRELQDEDS*CGSVFR Trigger: CCTGAAGACAGAGCCACACAAACTATCCTCATCCTG...CAACTCTCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS TCA 90 bp | AAGATGTTTAGAAACAGGTGCAGAAGCCAACTGACTGAGCAGCAATaGCCAATGTACTTGGTGGCTCTGTGCTTGAGTGTCAAACACCTG | + |
|
Preference number: 5 (lower is better) Translates to: KMFRNRCRSQLTEQQ*PMYLVALCLSVKHL Trigger: CAGGTGTTTGACACTCAAGCACAGAGCCACCAAGTACATTGGTCATTGCTGCTCAGTCAGTTGGCTTCTGCACCTGTTTCTAAACATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000057229.2 ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACGTCAAACACCTGCAGTaGCTAGGGTTGATAGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYVKHLQ*LGLIVI Trigger: AATCACTATCAACCCTAGCAACTGCAGGTGTTTGAC...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACACATATATAGTGCAGTaGCCACATTGCCTGAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYTYIVQ*PHCLKQ Trigger: TTGCTTCAGGCAATGTGGCAACTGCACTATATATGT...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | GACATTGTTATGTGTCATTGTGATACCTGGACTCAGGGCCTGCAGACCTCACCTGCACTGTGGATATGTTaGACTTGTCTTTTATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: DIVMCHCDTWTQGLQTSPALWIC*TCLLCL Trigger: CAGACATAAAAGACAAGTCAAACATATCCACAGTGC...AGGTGAGGTCTGCAGGCCCTGAGTCCAGGTATCACAATGACACATAACAATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | AACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAGAGTTGACATATATAGTGCAGTaGCCACATTGCCTGAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: NMRTDAQARDQVQGLRELTYIVQ*PHCLKQ Trigger: TTGCTTCAGGCAATGTGGCAACTGCACTATATATGT...CAACTCTCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | GGGGTATCTTTTGGGTATATGCCCAAGAGTGGTATAGCTGGGTATACCAGGTACGCACTGTGGATATGTTaGACTTGTCTTTTATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GVSFGYMPKSGIAGYTRYALWIC*TCLLCL Trigger: CAGACATAAAAGACAAGTCAAACATATCCACAGTGC...GTACCTGGTATACCCAGCTATACCACTCTTGGGCATATACCCAAAAGATACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | TCAGCTACTTGGGCAACTGGCTTGTTTGTGTTTAAGACATTTCCTCTTCTCACTGTCAAACACCTGCAGTaGCTAGGGTTGATAGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: SATWATGLFVFKTFPLLTVKHLQ*LGLIVI Trigger: AATCACTATCAACCCTAGCAACTGCAGGTGTTTGAC...AGTGAGAAGAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | ACTACAATAACAGGGGCATTTCATCCACTAAGTGCATATAGTAACTCAGTGTCATGGGGCCTGACACTCTaGCTGGAGTCAAGATGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: TTITGAFHPLSAYSNSVSWGLTL*LESRCL Trigger: TAAACATCTTGACTCCAGCAAGAGTGTCAGGCCCCA...TGACACTGAGTTACTATATGCACTTAGTGGATGAAATGCCCCTGTTATTGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | TTAAATCCTTGCCATCACTCAGGGAATGCCTTCTCTCATAAAGTCAGAAATTGTTGGGGCCTGACACTCTaGCTGGAGTCAAGATGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LNPCHHSGNAFSHKVRNCWGLTL*LESRCL Trigger: TAAACATCTTGACTCCAGCAAGAGTGTCAGGCCCCA...ACAATTTCTGACTTTATGAGAGAAGGCATTCCCTGAGTGATGGCAAGGATTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | AACATGAGAACTGATGCACAAGCAAGGGATCAAGTTCAAGGGCTGAGAGAGTTGGCACTGTGGATATGTTaGACTTGTCTTTTATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NMRTDAQARDQVQGLRELALWIC*TCLLCL Trigger: CAGACATAAAAGACAAGTCAAACATATCCACAGTGC...CAACTCTCTCAGCCCTTGAACTTGATCCCTTGCTTGTGCATCAGTTCTCATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | ACTACAATAACAGGGGCATTTCATCCACTAAGTGCATATAGTAACTCAGTGTCACAGGATGAGGATAGTTaGTGTGGCTCTGTCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TTITGAFHPLSAYSNSVSQDEDS*CGSVFR Trigger: CCTGAAGACAGAGCCACACAAACTATCCTCATCCTG...TGACACTGAGTTACTATATGCACTTAGTGGATGAAATGCCCCTGTTATTGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | TTAAATCCTTGCCATCACTCAGGGAATGCCTTCTCTCATAAAGTCAGAAATTGTCAGGATGAGGATAGTTaGTGTGGCTCTGTCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LNPCHHSGNAFSHKVRNCQDEDS*CGSVFR Trigger: CCTGAAGACAGAGCCACACAAACTATCCTCATCCTG...ACAATTTCTGACTTTATGAGAGAAGGCATTCCCTGAGTGATGGCAAGGATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | TCAGCTACTTGGGCAACTGGCTTGTTTGTGTTTAAGACATTTCCTCTTCTCACTACATATATAGTGCAGTaGCCACATTGCCTGAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SATWATGLFVFKTFPLLTTYIVQ*PHCLKQ Trigger: TTGCTTCAGGCAATGTGGCAACTGCACTATATATGT...AGTGAGAAGAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | TTAAATCCTTGCCATCACTCAGGGAATGCCTTCTCTCATAAAGTCAGAAATTGTGTCAAACACCTGCAGTaGCTAGGGTTGATAGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: LNPCHHSGNAFSHKVRNCVKHLQ*LGLIVI Trigger: AATCACTATCAACCCTAGCAACTGCAGGTGTTTGAC...ACAATTTCTGACTTTATGAGAGAAGGCATTCCCTGAGTGATGGCAAGGATTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | TTGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTGAAAGTTCAAAGACACGTCAAACACCTGCAGTaGCTAGGGTTGATAGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: LWFRLQPSNRCKLKVQRHVKHLQ*LGLIVI Trigger: AATCACTATCAACCCTAGCAACTGCAGGTGTTTGAC...GTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | TTGTTGAATGAGAGATGCTTTTCCTTCTATAGGCATTTTCCCTTGAGTGGATTAGTCAAACACCTGCAGTaGCTAGGGTTGATAGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: LLNERCFSFYRHFPLSGLVKHLQ*LGLIVI Trigger: AATCACTATCAACCCTAGCAACTGCAGGTGTTTGAC...TAATCCACTCAAGGGAAAATGCCTATAGAAGGAAAAGCATCTCTCATTCAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | TTAAATCCTTGCCATCACTCAGGGAATGCCTTCTCTCATAAAGTCAGAAATTGTACATATATAGTGCAGTaGCCACATTGCCTGAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LNPCHHSGNAFSHKVRNCTYIVQ*PHCLKQ Trigger: TTGCTTCAGGCAATGTGGCAACTGCACTATATATGT...ACAATTTCTGACTTTATGAGAGAAGGCATTCCCTGAGTGATGGCAAGGATTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | TCAGCTACTTGGGCAACTGGCTTGTTTGTGTTTAAGACATTTCCTCTTCTCACTGAACTAGAGTTCATGTaGCTAATGATAACAAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SATWATGLFVFKTFPLLTELEFM*LMITKG Trigger: TCCCTTTGTTATCATTAGCAACATGAACTCTAGTTC...AGTGAGAAGAGGAAATGTCTTAAACACAAACAAGCCAGTTGCCCAAGTAGCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | TTGTTGAATGAGAGATGCTTTTCCTTCTATAGGCATTTTCCCTTGAGTGGATTAACATATATAGTGCAGTaGCCACATTGCCTGAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LLNERCFSFYRHFPLSGLTYIVQ*PHCLKQ Trigger: TTGCTTCAGGCAATGTGGCAACTGCACTATATATGT...TAATCCACTCAAGGGAAAATGCCTATAGAAGGAAAAGCATCTCTCATTCAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | TTGTGGTTTAGATTACAGCCTTCTAACAGGTGTAAGCTGAAAGTTCAAAGACACGCACTGTGGATATGTTaGACTTGTCTTTTATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LWFRLQPSNRCKLKVQRHALWIC*TCLLCL Trigger: CAGACATAAAAGACAAGTCAAACATATCCACAGTGC...GTGTCTTTGAACTTTCAGCTTACACCTGTTAGAAGGCTGTAATCTAAACCACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | ACTACAATAACAGGGGCATTTCATCCACTAAGTGCATATAGTAACTCAGTGTCAGAACTAGAGTTCATGTaGCTAATGATAACAAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TTITGAFHPLSAYSNSVSELEFM*LMITKG Trigger: TCCCTTTGTTATCATTAGCAACATGAACTCTAGTTC...TGACACTGAGTTACTATATGCACTTAGTGGATGAAATGCCCCTGTTATTGTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS-3UTR CAA 90 bp | TTGTTGAATGAGAGATGCTTTTCCTTCTATAGGCATTTTCCCTTGAGTGGATTAGAACTAGAGTTCATGTaGCTAATGATAACAAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLNERCFSFYRHFPLSGLELEFM*LMITKG Trigger: TCCCTTTGTTATCATTAGCAACATGAACTCTAGTTC...TAATCCACTCAAGGGAAAATGCCTATAGAAGGAAAAGCATCTCTCATTCAACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS CAA 90 bp | CCAATGTACTTGGTGGCTCTGTGCTTGAGTGTCAAACACCTGCAGTaGCTAGGGTTGATAGTGATTGCTTGGAAACAACTGAGTAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: PMYLVALCLSVKHLQ*LGLIVIAWKQLSRH Trigger: GTGTCTACTCAGTTGTTTCCAAGCAATCACTATCAACCCTAGCAACTGCAGGTGTTTGACACTCAAGCACAGAGCCACCAAGTACATTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000057229.2 ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS TCA 72 bp | TTTATGTCTGTAGAGGACACTCACCATAGAGACACTTaGGCAGGCCATGAGAGTCAGACACAGAGCATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FMSVEDTHHRDT*AGHESQTQSIR Trigger: TCTGATGCTCTGTGTCTGACTCTCATGGCCTGCTCAAGTGTCTCTATGGTGAGTGTCCTCTACAGACATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000057229.2 ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS CAA 72 bp | CTGTGCTTGAGTGTCAAACACCTGCAGTTGCTAGGGTaGATAGTGATTGCTTGGAAACAACTGAGTAGACAC | + |
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Preference number: 6 (lower is better) Translates to: LCLSVKHLQLLG*IVIAWKQLSRH Trigger: GTGTCTACTCAGTTGTTTCCAAGCAATCACTATCAACCCTAGCAACTGCAGGTGTTTGACACTCAAGCACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000057229.2 ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS CAA 72 bp | CATCAGAGAAGCACAGTAATAACATATATAGTGCAGTaGCCACATTGCCTGAAGCAACCCATGAGCAGTACC | + |
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Preference number: 6 (lower is better) Translates to: HQRSTVITYIVQ*PHCLKQPMSST Trigger: GGTACTGCTCATGGGTTGCTTCAGGCAATGTGGCAACTGCACTATATATGTTATTACTGTGCTTCTCTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000057229.2 ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS TCA 72 bp | GTGGCTCTGTCTTCAGGAGAGTCTTTTAGAGCATGCTaGGCACTGTGGATATGTTTGACTTGTCTTTTATGT | + |
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Preference number: 6 (lower is better) Translates to: VALSSGESFRAC*ALWICLTCLLC Trigger: ACATAAAAGACAAGTCAAACATATCCACAGTGCTCAGCATGCTCTAAAAGACTCTCCTGAAGACAGAGCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000057229.2 ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS TCA 72 bp | CCCATAGCATTGGATATTTGGAGTAGGTTGTCAAGATaGCCACTATGGAGGAGAATGAGTAAGAGAGGACAA | + |
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Preference number: 6 (lower is better) Translates to: PIALDIWSRLSR*PLWRRMSKRGQ Trigger: TTGTCCTCTCTTACTCATTCTCCTCCATAGTGGTCATCTTGACAACCTACTCCAAATATCCAATGCTATGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000057229.2 ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS GCA 72 bp | AGCACAGTAATAACATATATAGTGCAGTTGCCACATTaGCTGAAGCAACCCATGAGCAGTACCCATAACTCA | + |
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Preference number: 6 (lower is better) Translates to: STVITYIVQLPH*LKQPMSSTHNS Trigger: TGAGTTATGGGTACTGCTCATGGGTTGCTTCAGGCAATGTGGCAACTGCACTATATATGTTATTACTGTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000057229.2 ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS CAA 90 bp | TCTGACATTGCCCGTGGAATGCCTCTTGAGATGATAGACAGGCAATaGGCAAAAGTCAAGTGCTTTAAAATCAGATCTTTGGGCATTAAG | + |
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Preference number: 6 (lower is better) Translates to: SDIARGMPLEMIDRQ*AKVKCFKIRSLGIK Trigger: CTTAATGCCCAAAGATCTGATTTTAAAGCACTTGACTTTTGCCAATTGCCTGTCTATCATCTCAAGAGGCATTCCACGGGCAATGTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057229.2 ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000228463.2 |
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| CDS TCA 72 bp | AGTCTTTTAGAGCATGCTGAGCACTGTGGATATGTTTaGCTTGTCTTTTATGTCTGTAGAGGACACTCACCA | + |
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Preference number: 6 (lower is better) Translates to: SLLEHAEHCGYV*LVFYVCRGHSP Trigger: TGGTGAGTGTCCTCTACAGACATAAAAGACAAGTCAAACATATCCACAGTGCTCAGCATGCTCTAAAAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000057229.2 ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000227611.2 ENSMUST00000228268.2 ENSMUST00000228463.2 ENSMUST00000228646.2 |
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| CDS GCA 72 bp | CTTGAGATGATAGACAGGCAATTGGCAAAAGTCAAGTaGTTTAAAATCAGATCTTTGGGCATTAAGTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LEMIDRQLAKVK*FKIRSLGIKCF Trigger: AAAACACTTAATGCCCAAAGATCTGATTTTAAAGCACTTGACTTTTGCCAATTGCCTGTCTATCATCTCAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057229.2 ENSMUST00000226622.2 ENSMUST00000226855.2 ENSMUST00000228463.2 |
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